BINCODE NAME IDENTIFIER DESCRIPTION TYPE
'0' 'control genes' '' ''
'1' 'PS' 'niben044scf00001478ctg011_22435-26842' '(at5g38660 : 218.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 142.0) no description available & (gnl|cdd|68901 : 135.0) no description available & (reliability: 436.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T
'1' 'PS' 'niben101scf02366_668334-677305' '(at5g38660 : 295.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (reliability: 590.0) & (original description: Putative APE1, Description = At5g38660, PFAM = PF11016)' T
'1' 'PS' 'niben101scf02657_42745-51568' '(at5g38660 : 213.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|68901 : 140.0) no description available & (gnl|cdd|38271 : 138.0) no description available & (reliability: 426.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T
'1' 'PS' 'niben101scf11232_31303-37047' '(at5g38660 : 220.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 144.0) no description available & (gnl|cdd|68901 : 138.0) no description available & (reliability: 440.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T
'1.1' 'PS.lightreaction' '' ''
'1.1.1' 'PS.lightreaction.photosystem II' '' ''
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'nbv0.3scaffold12402_39151-43394' '(at3g08940 : 464.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 240.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 928.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'nbv0.5scaffold2832_170243-177028' '(at1g76570 : 243.0) Chlorophyll A-B binding family protein; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.3 (TAIR:AT3G27690.1); Has 2289 Blast hits to 2229 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1997; Viruses - 0; Other Eukaryotes - 289 (source: NCBI BLink). & (p20866|cb2_phypa : 125.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss) & (gnl|cdd|84819 : 84.2) no description available & (reliability: 486.0) & (original description: Putative CAB1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00000987ctg002_1036-3639' '(p27492|cb21_tobac : 506.0) Chlorophyll a-b binding protein 16, chloroplast precursor (LHCII type I CAB-16) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 451.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 902.0) & (original description: Putative CABE, Description = Chlorophyll a-b binding protein E, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00003625ctg018_686-3069' '(p27495|cb24_tobac : 253.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 233.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 92.3) no description available & (reliability: 466.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00008488ctg013_455-4778' '(at4g10340 : 388.0) photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus; light harvesting complex of photosystem II 5 (LHCB5); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis, nonphotochemical quenching; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2360 Blast hits to 2295 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p15194|cb2b_pinsy : 191.0) Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine) & (gnl|cdd|84819 : 160.0) no description available & (reliability: 776.0) & (original description: Putative LHCB5, Description = Chlorophyll a-b binding protein CP26, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00014092ctg004_9468-12337' '(at5g54270 : 457.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 439.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 181.0) no description available & (reliability: 914.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00014580ctg014_7458-10386' '(p27493|cb22_tobac : 506.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 459.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 918.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00017935ctg003_4021-8607' '(at3g08940 : 449.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 242.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 898.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00046604ctg005_10806-13606' '(p27496|cb25_tobac : 509.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 459.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 183.0) no description available & (reliability: 918.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101ctg16374_5244-8044' '(p27496|cb25_tobac : 491.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 442.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 184.0) no description available & (reliability: 884.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01548_42030-45185' '(p27494|cb23_tobac : 525.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at2g05100 : 481.0) Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.; photosystem II light harvesting complex gene 2.1 (LHCB2.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to salt stress, response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.2 (TAIR:AT2G05070.1); Has 2375 Blast hits to 2314 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2059; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|84819 : 181.0) no description available & (reliability: 962.0) & (original description: Putative CAB4, Description = Chlorophyll a-b binding protein 4, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01677_631831-634307' '(p27491|cb27_tobac : 307.0) Chlorophyll a-b binding protein 7, chloroplast precursor (LHCII type I CAB-7) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 267.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 100.0) no description available & (reliability: 534.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01677_632248-634631' '(p27491|cb27_tobac : 251.0) Chlorophyll a-b binding protein 7, chloroplast precursor (LHCII type I CAB-7) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 232.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 92.6) no description available & (reliability: 464.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01785_974744-977538' '(p27493|cb22_tobac : 508.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 461.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 922.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01785_986234-993789' '(p27493|cb22_tobac : 508.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 461.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 181.0) no description available & (reliability: 922.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01987_39604-42187' '(p27494|cb23_tobac : 434.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 410.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 175.0) no description available & (reliability: 820.0) & (original description: Putative CAB5, Description = Chlorophyll a-b binding protein 5, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02164_249040-256911' '(at1g76570 : 463.0) Chlorophyll A-B binding family protein; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.3 (TAIR:AT3G27690.1); Has 2289 Blast hits to 2229 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1997; Viruses - 0; Other Eukaryotes - 289 (source: NCBI BLink). & (p27518|cb21_goshi : 195.0) Chlorophyll a-b binding protein 151, chloroplast precursor (LHCII type II CAB-151) (LHCP) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84819 : 132.0) no description available & (reliability: 926.0) & (original description: Putative AB80, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02262_155637-158437' '(p27496|cb25_tobac : 511.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 457.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 185.0) no description available & (reliability: 914.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02459_61294-66254' '(at4g10340 : 393.0) photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus; light harvesting complex of photosystem II 5 (LHCB5); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis, nonphotochemical quenching; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2360 Blast hits to 2295 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p15194|cb2b_pinsy : 192.0) Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine) & (gnl|cdd|84819 : 160.0) no description available & (reliability: 786.0) & (original description: Putative LHCB5, Description = Chlorophyll a-b binding protein CP26, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02513_757523-760433' '(at1g15820 : 386.0) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (p36494|cb4_spiol : 369.0) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|84819 : 151.0) no description available & (reliability: 772.0) & (original description: Putative CAP10B, Description = Chlorophyll a-b binding protein CP24 10B, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02513_856697-859668' '(at1g15820 : 384.0) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (p36494|cb4_spiol : 369.0) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|84819 : 151.0) no description available & (reliability: 768.0) & (original description: Putative Lhcb6, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02852_218949-222016' '(p27494|cb23_tobac : 510.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 475.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 950.0) & (original description: Putative CAB4, Description = Chlorophyll a-b binding protein 4, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02971_463963-467921' '(at5g54270 : 461.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 439.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 179.0) no description available & (reliability: 922.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf04504_341158-397031' '(at5g54270 : 456.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 437.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 180.0) no description available & (reliability: 912.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf08088_455858-458632' '(p27495|cb24_tobac : 336.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 302.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 114.0) no description available & (reliability: 604.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf11384_107867-112770' '(at3g08940 : 448.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 242.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 896.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf12382_134483-137283' '(p27495|cb24_tobac : 488.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 440.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 880.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold10272_29167-32275' '(at2g39470 : 241.0) PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 90 Blast hits to 90 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85679 : 142.0) no description available & (reliability: 482.0) & (original description: Putative PNSL1, Description = Photosynthetic NDH subunit of lumenal location 1, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold10900_1-3232' '(q7dm39|psbp1_tobac : 383.0) Oxygen-evolving enhancer protein 2-1, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 304.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 209.0) no description available & (reliability: 608.0) & (original description: Putative oeeB, Description = Photosystem II subunit P-1, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold17062_4018-6692' '(at1g14150 : 184.0) Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.; PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 123.0) no description available & (reliability: 368.0) & (original description: Putative PNSL2, Description = Photosynthetic NDH subunit of lumenal location 2, chloroplastic, PFAM = PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold19688_1-1991' '(p06411|psbb_tobac : 213.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 211.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 204.0) no description available & (reliability: 422.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold44907_13747-17220' '(q40519|psbr_tobac : 162.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 150.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 150.0) no description available & (reliability: 300.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold50988_1758-6294' '(at3g01440 : 234.0) Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.; PsbQ-like 1 (PQL1); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction, photosynthetic electron transport chain; LOCATED IN: in 7 components; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 165 Blast hits to 165 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69290 : 163.0) no description available & (reliability: 468.0) & (original description: Putative PNSL3, Description = Photosynthetic NDH subunit of lumenal location 3, chloroplastic, PFAM = PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold69122_881-8879' '(at3g55330 : 261.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 111.0) no description available & (reliability: 522.0) & (original description: Putative ppl1, Description = PsbP-like protein 1, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold136_1042686-1047745' '(at3g56650 : 327.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT1G77090.1); Has 131 Blast hits to 131 proteins in 35 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative PPD6, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold334_634401-636988' '(p80470|psby_spiol : 135.0) Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine-metabolizing enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] - Spinacia oleracea (Spinach) & (at1g67740 : 112.0) PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.; photosystem II BY (PSBY); FUNCTIONS IN: manganese ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, photosystem II; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbY (InterPro:IPR009388); Has 135 Blast hits to 91 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PSBY, Description = Photosystem II core complex proteins psbY, PFAM = PF06298;PF06298)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold999_509124-511733' '(p06411|psbb_tobac : 241.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 239.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 236.0) no description available & (reliability: 478.0) & (original description: Putative cp47, Description = PSII 47 kDa protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold1289_354499-359285' '(at1g05385 : 133.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold1717_472901-482922' '(at1g76450 : 247.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative PPD3, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold2367_189306-213243' '(gnl|cdd|87217 : 128.0) no description available & (at2g30570 : 92.8) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q41387|psbw_spiol : 82.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (reliability: 185.6) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold3349_254214-256839' '(gnl|cdd|79279 : 1005.0) no description available & (p06411|psbb_tobac : 994.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 986.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (reliability: 1972.0) & (original description: Putative psbB, Description = Photosystem II CP47 reaction center protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold3540_131993-134484' '(gnl|cdd|79223 : 313.0) no description available & (p06006|psbd_pea : 290.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Pisum sativum (Garden pea) & (atcg00270 : 289.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 578.0) & (original description: Putative psbD, Description = PsbD, PFAM = PF00124)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold7813_47934-50152' '(p06415|psbh_tobac : 131.0) Photosystem II reaction center protein H (PSII-H) (Photosystem II 10 kDa phosphoprotein) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79283 : 131.0) no description available & (atcg00710 : 123.0) Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII.; photosystem II reaction center protein H (PSBH); FUNCTIONS IN: phosphate binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II phosphoprotein PsbH (InterPro:IPR001056). & (reliability: 246.0) & (original description: Putative psbH, Description = Photosystem II reaction center protein H, PFAM = PF00737)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00008453ctg017_415-2755' '(p06411|psbb_tobac : 214.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 212.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 207.0) no description available & (reliability: 424.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00020251ctg006_2694-5005' '(atcg00680 : 149.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (p06411|psbb_tobac : 149.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79279 : 145.0) no description available & (reliability: 298.0) & (original description: Putative cp47, Description = PSII 47 kDa protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00029630ctg010_1-3218' '(q40519|psbr_tobac : 182.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 144.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 105.0) no description available & (reliability: 288.0) & (original description: Putative psII10, Description = Photosystem II 10 kDa polypeptide, chloroplast, PFAM = PF04725)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00032545ctg000_2559-6497' '(q40459|psbo_tobac : 589.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 514.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 339.0) no description available & (reliability: 1028.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00038205ctg003_10973-13014' '(gnl|cdd|87217 : 94.1) no description available & (q41387|psbw_spiol : 88.6) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 87.8) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PsbW, Description = Photosystem II reaction center, PFAM = PF07123)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00047870ctg002_12610-14112' '(gnl|cdd|79279 : 306.0) no description available & (p06411|psbb_tobac : 295.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 292.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (reliability: 584.0) & (original description: Putative psbB, Description = Photosystem II 47 kDa protein 3, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00055396ctg005_208-4235' '(at1g05385 : 122.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00055576ctg000_1-3644' '(at5g11450 : 197.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative gpm35, Description = Photosystem II reaction center PsbP family protein, PFAM = )' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00058_943574-948747' '(at1g05385 : 189.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00176_542087-545367' '(gnl|cdd|69290 : 232.0) no description available & (at4g05180 : 214.0) Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.; photosystem II subunit Q-2 (PSBQ-2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 206 Blast hits to 206 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p12301|psbq_spiol : 210.0) Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) - Spinacia oleracea (Spinach) & (reliability: 428.0) & (original description: Putative psbQ, Description = Chloroplast oxygen-evolving protein 16 kDa subunit, PFAM = PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00337_687279-696195' '(at3g55330 : 271.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 113.0) no description available & (reliability: 542.0) & (original description: Putative PPL1, Description = PsbP-like protein 1, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00578_605-9383' '(at3g01440 : 236.0) Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.; PsbQ-like 1 (PQL1); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction, photosynthetic electron transport chain; LOCATED IN: in 7 components; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 165 Blast hits to 165 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69290 : 166.0) no description available & (reliability: 472.0) & (original description: Putative PNSL3, Description = Photosynthetic NDH subunit of lumenal location 3, chloroplastic, PFAM = PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00879_523142-525654' '(at1g03600 : 153.0) PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative BnaA08g27510D, Description = BnaA08g27510D protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01116_187040-191479' '(q40519|psbr_tobac : 199.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 169.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 147.0) no description available & (reliability: 338.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01208_179066-180848' '(p06411|psbb_tobac : 223.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 222.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 216.0) no description available & (reliability: 444.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01818_434431-438758' '(at2g28605 : 221.0) Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).; Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 131 Blast hits to 131 proteins in 58 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PPD2, Description = PsbP domain-containing protein 2, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02104_5542-8664' '(gnl|cdd|79222 : 655.0) no description available & (p69556|psba_tobac : 641.0) Photosystem Q(B) protein (32 kDa thylakoid membrane protein) (Photosystem II protein D1) - Nicotiana tabacum (Common tobacco) & (atcg00020 : 640.0) Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core; photosystem II reaction center protein A (PSBA); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II reaction centre protein PsbA/D1 (InterPro:IPR005867), Photosynthetic reaction centre, L/M (InterPro:IPR000484); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein D (TAIR:ATCG00270.1). & (reliability: 1280.0) & (original description: Putative psbA, Description = Photosystem II protein D1, PFAM = PF00124)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02160_389271-473238' '(at3g55330 : 261.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 112.0) no description available & (reliability: 522.0) & (original description: Putative ppl1, Description = PsbP-like protein 1, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02160_638477-640725' '(atcg00580 : 155.0) PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized.; photosystem II reaction center protein E (PSBE); FUNCTIONS IN: electron carrier activity, heme binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein cytochrome b559, N-terminal (InterPro:IPR013081), Photosystem II protein cytochrome b559, conserved site (InterPro:IPR006216), Photosystem II protein cytochrome b559, alpha subunit, lumenal region (InterPro:IPR013082), Photosystem II protein cytochrome b559, alpha subunit (InterPro:IPR006217). & (q2veg1|psbe_soltu : 155.0) Cytochrome b559 alpha subunit (PSII reaction center subunit V) - Solanum tuberosum (Potato) & (gnl|cdd|79281 : 149.0) no description available & (reliability: 310.0) & (original description: Putative psbE, Description = Cytochrome b559 subunit alpha, PFAM = PF00284;PF00283)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02469_51764-54651' '(gnl|cdd|87217 : 121.0) no description available & (q41387|psbw_spiol : 113.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 112.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02494_416289-422153' '(at5g51545 : 101.0) Encodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II.; low psii accumulation2 (LPA2); INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative LPA2, Description = Protein LOW PSII ACCUMULATION 2, chloroplastic, PFAM = )' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02517_1637324-1640715' '(at2g39470 : 261.0) PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 90 Blast hits to 90 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85679 : 144.0) no description available & (reliability: 522.0) & (original description: Putative PNSL1, Description = Photosynthetic NDH subunit of lumenal location 1, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02608_411302-414839' '(q40459|psbo_tobac : 575.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 511.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 338.0) no description available & (reliability: 1022.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02790_536537-538902' '(at2g06520 : 80.5) Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.; photosystem II subunit X (PSBX); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbX (InterPro:IPR009518); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative psbX, Description = Chloroplast photosystem II subunit X, PFAM = PF06596)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02840_114787-117461' '(at1g14150 : 142.0) Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.; PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 84.3) no description available & (reliability: 284.0) & (original description: Putative 2, Description = Photosynthetic NDH subcomplex L 2, PFAM = PF05757;PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf03856_321090-324928' '(q40519|psbr_tobac : 159.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 149.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 149.0) no description available & (reliability: 298.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf03877_34756-39180' '(at3g56650 : 330.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT1G77090.1); Has 131 Blast hits to 131 proteins in 35 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative PPD6, Description = PsbP domain-containing protein 6, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf04663_580014-596470' '(at5g11450 : 328.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative PPD5, Description = PsbP domain-containing protein 5, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05226_675313-684329' '(at1g76450 : 242.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative PPD3, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05304_387782-392985' '(q9smb4|psbs_tobac : 331.0) Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) & (at1g44575 : 260.0) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.; NONPHOTOCHEMICAL QUENCHING 4 (NPQ4); FUNCTIONS IN: chlorophyll binding, xanthophyll binding; INVOLVED IN: response to karrikin, nonphotochemical quenching; LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative PSBS, Description = Photosystem II 22 kDa protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05419_55507-60452' '(at1g05385 : 182.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05437_483712-486299' '(p80470|psby_spiol : 124.0) Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine-metabolizing enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] - Spinacia oleracea (Spinach) & (at1g67740 : 102.0) PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.; photosystem II BY (PSBY); FUNCTIONS IN: manganese ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, photosystem II; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbY (InterPro:IPR009388); Has 135 Blast hits to 91 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PSBY, Description = Photosystem II core complex proteins psbY, PFAM = PF06298;PF06298)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05555_53698-57668' '(q40459|psbo_tobac : 589.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 512.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 338.0) no description available & (reliability: 1024.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05782_130973-135295' '(q7dm39|psbp1_tobac : 456.0) Oxygen-evolving enhancer protein 2-1, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 377.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 277.0) no description available & (reliability: 754.0) & (original description: Putative PSBP1, Description = Oxygen-evolving enhancer protein 2-1, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05801_94774-97876' '(gnl|cdd|87217 : 125.0) no description available & (q41387|psbw_spiol : 117.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 115.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06008_176611-179153' '(at2g01918 : 105.0) Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.; PsbQ-like 3 (PQL3); CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 83.5) no description available & (reliability: 210.0) & (original description: Putative PQL3, Description = PQL-like protein, PFAM = PF05757)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06117_568657-571087' '(at1g03600 : 162.0) PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative BnaAnng39860D, Description = BnaAnng39860D protein, PFAM = PF13326)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06826_924983-930921' '(p18212|psbp2_tobac : 510.0) Oxygen-evolving enhancer protein 2-2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 367.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 293.0) no description available & (reliability: 734.0) & (original description: Putative PSBP2, Description = Oxygen-evolving enhancer protein 2-2, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06964_1069-3560' '(gnl|cdd|79223 : 303.0) no description available & (atcg00270 : 280.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (p06006|psbd_pea : 280.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Pisum sativum (Garden pea) & (reliability: 560.0) & (original description: Putative psbD, Description = PsbD, PFAM = PF00124)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf07589_294997-308256' '(at4g15510 : 306.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85679 : 155.0) no description available & (reliability: 612.0) & (original description: Putative PPD1, Description = PsbP-domain protein 1, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf10085_117571-122825' '(at4g15510 : 305.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85679 : 153.0) no description available & (reliability: 610.0) & (original description: Putative PPD1, Description = PsbP-domain protein 1, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf11852_172944-178152' '(q9smb4|psbs_tobac : 318.0) Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) & (at1g44575 : 257.0) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.; NONPHOTOCHEMICAL QUENCHING 4 (NPQ4); FUNCTIONS IN: chlorophyll binding, xanthophyll binding; INVOLVED IN: response to karrikin, nonphotochemical quenching; LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative PSBS, Description = Photosystem II 22 kDa protein, chloroplastic, PFAM = PF00504)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf12159_921659-935978' '(gnl|cdd|87217 : 125.0) no description available & (at2g30570 : 87.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q41387|psbw_spiol : 85.5) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (reliability: 174.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf12858_153710-157331' '(at1g77090 : 337.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT3G56650.1); Has 207 Blast hits to 207 proteins in 35 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative PPD4, Description = PsbP domain-containing protein 4, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15187_360674-365112' '(q04127|psbp3_tobac : 156.0) Oxygen-evolving enhancer protein 2-3, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 135.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 120.0) no description available & (reliability: 270.0) & (original description: Putative oeeB, Description = Photosystem II subunit P-1, PFAM = PF01789;PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15187_361701-366370' '(p18212|psbp2_tobac : 484.0) Oxygen-evolving enhancer protein 2-2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 340.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 290.0) no description available & (reliability: 680.0) & (original description: Putative PSBP2, Description = Oxygen-evolving enhancer protein 2-2, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15435_1-3463' '(at2g28605 : 221.0) Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).; Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 131 Blast hits to 131 proteins in 58 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PPD2, Description = PsbP domain-containing protein 2, chloroplastic, PFAM = PF01789)' T
'1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf28115_201578-203730' '(at5g02120 : 116.0) Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions.; one helix protein (OHP); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative HLIP, Description = High-light-induced protein, chloroplastic, PFAM = )' T
'1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'nbv0.3scaffold50129_10123-15131' '(at5g23120 : 212.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 209.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 95.1) no description available & (reliability: 424.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T
'1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'nbv0.3scaffold61872_1-6220' '(at5g23120 : 413.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 409.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 167.0) no description available & (gnl|cdd|38720 : 166.0) no description available & (reliability: 826.0) & (original description: Putative hcf, Description = Ycf48-like protein, PFAM = PF14870)' T
'1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben044scf00044787ctg001_5196-13828' '(at5g23120 : 559.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 551.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|38720 : 231.0) no description available & (gnl|cdd|34127 : 228.0) no description available & (reliability: 1118.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T
'1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben101scf03595_451388-460324' '(at5g23120 : 552.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 543.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 232.0) no description available & (gnl|cdd|38720 : 230.0) no description available & (reliability: 1104.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T
'1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben101scf07191_232290-237051' '(at5g23120 : 219.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 216.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 96.3) no description available & (gnl|cdd|38720 : 80.4) no description available & (reliability: 438.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T
'1.1.1.4' 'PS.lightreaction.photosystem II.LHC biogenesis' '' ''
'1.1.2' 'PS.lightreaction.photosystem I' 'nbv0.3scaffold7765_33151-37573' '(at3g21740 : 367.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 306.0) no description available & (reliability: 734.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T
'1.1.2' 'PS.lightreaction.photosystem I' 'niben044scf00017951ctg002_22238-26599' '(at3g21740 : 366.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 302.0) no description available & (reliability: 732.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T
'1.1.2' 'PS.lightreaction.photosystem I' 'niben101scf09172_233920-238281' '(at3g21740 : 372.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 308.0) no description available & (reliability: 744.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold11673_250-4947' '(at1g34000 : 146.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative OHP1, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold23673_4802-8647' '(at3g54890 : 380.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 187.0) no description available & (p13851|cb21_sinal : 136.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 760.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold35045_1206-5369' '(at1g34000 : 158.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold48685_11282-14779' '(at1g61520 : 380.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 151.0) no description available & (p13869|cb12_pethy : 130.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 760.0) & (original description: Putative LHCA5, Description = Photosystem I chlorophyll a/b-binding protein 5, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.5scaffold3918_63574-67653' '(at1g34000 : 162.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben044scf00013757ctg011_1796-5875' '(at1g34000 : 164.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben044scf00030289ctg011_1-3073' '(at1g19150 : 371.0) PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,; photosystem I light harvesting complex gene 6 (LHCA6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2345 Blast hits to 2241 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1989; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (p13869|cb12_pethy : 297.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 164.0) no description available & (reliability: 742.0) & (original description: Putative LHCA6, Description = Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00063_1044366-1047592' '(at3g47470 : 445.0) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 234.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 164.0) no description available & (reliability: 890.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00245_356560-360656' '(at3g47470 : 424.0) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 228.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 157.0) no description available & (reliability: 848.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00406_358007-361819' '(at3g54890 : 382.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 188.0) no description available & (p13851|cb21_sinal : 137.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 764.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00559_361340-366543' '(at1g34000 : 148.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative OHP1, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01276_19534-23971' '(at3g54890 : 397.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 190.0) no description available & (p13851|cb21_sinal : 140.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 794.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01328_108473-112301' '(at1g61520 : 401.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 153.0) no description available & (p13869|cb12_pethy : 144.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 802.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01453_504752-508915' '(at1g34000 : 159.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf02351_731065-734530' '(at1g61520 : 392.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 152.0) no description available & (p13869|cb12_pethy : 131.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 784.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05063_534531-539829' '(at1g19150 : 380.0) PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,; photosystem I light harvesting complex gene 6 (LHCA6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2345 Blast hits to 2241 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1989; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (p13869|cb12_pethy : 305.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 166.0) no description available & (reliability: 760.0) & (original description: Putative LHCA6, Description = Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05621_946434-950152' '(p13869|cb12_pethy : 431.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 387.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84819 : 168.0) no description available & (reliability: 774.0) & (original description: Putative CAB7, Description = Chlorophyll a-b binding protein 7, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05950_20039-23458' '(p13869|cb12_pethy : 278.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 233.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84819 : 84.5) no description available & (reliability: 466.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504;PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf07631_65587-69666' '(at1g34000 : 160.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf11767_90178-93023' '(at1g61520 : 385.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 151.0) no description available & (p13869|cb12_pethy : 130.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 770.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T
'1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf25021_119982-123082' '(at1g45474 : 300.0) Encodes a component of the light harvesting complex of photosystem I.; photosystem I light harvesting complex gene 5 (LHCA5); FUNCTIONS IN: pigment binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, photosystem I antenna complex, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light-harvesting chlorophyll-protein complex I subunit A4 (TAIR:AT3G47470.1); Has 2339 Blast hits to 2263 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2004; Viruses - 0; Other Eukaryotes - 331 (source: NCBI BLink). & (gnl|cdd|84819 : 152.0) no description available & (p13869|cb12_pethy : 139.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 600.0) & (original description: Putative LHCA5, Description = Photosystem I chlorophyll a/b-binding protein 5, chloroplastic, PFAM = PF00504)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold15025_1-3534' '(p12355|psaf_spiol : 292.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 286.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 283.0) no description available & (reliability: 572.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold15057_390-2893' '(q41229|psaeb_nicsy : 159.0) Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E B) [Contains: Photosystem I reaction center subunit IV B isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 102.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.7) no description available & (reliability: 204.0) & (original description: Putative PSAEB, Description = Photosystem I reaction center subunit IV B, chloroplastic, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold35852_18315-21245' '(at1g08380 : 192.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold50894_1270-4493' '(q41228|psaea_nicsy : 164.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 110.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.7) no description available & (reliability: 220.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold96361_1-3433' '(at1g30380 : 166.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 152.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 82.7) no description available & (reliability: 332.0) & (original description: Putative psaK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold206_679328-682965' '(p12355|psaf_spiol : 288.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 282.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 282.0) no description available & (reliability: 564.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold218_782944-787504' '(at2g46820 : 100.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PSAP, Description = Thylakoid membrane phosphoprotein 14 kDa, PFAM = PF14159)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold4167_63985-67827' '(at4g12800 : 280.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (q41385|psal_spiol : 279.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (gnl|cdd|86048 : 216.0) no description available & (reliability: 560.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold10418_3535-6442' '(p06407|psab_tobac : 595.0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB) (PSI-B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79272 : 590.0) no description available & (atcg00340 : 585.0) Encodes the D1 subunit of photosystem I and II reaction centers.; PSAB; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis, light harvesting in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I psaB (InterPro:IPR006244), Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00350.1). & (reliability: 1170.0) & (original description: Putative psaB, Description = PsaB, PFAM = PF00223)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00003217ctg003_5093-7533' '(at1g55670 : 187.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 180.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 93.1) no description available & (reliability: 374.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00007972ctg038_1-2772' '(gnl|cdd|66888 : 213.0) no description available & (o04006|psah_brara : 157.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Brassica rapa (Turnip) & (at3g16140 : 154.0) Encodes subunit H of photosystem I reaction center subunit VI.; photosystem I subunit H-1 (PSAH-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast, photosystem I reaction center; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H2 (TAIR:AT1G52230.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PSAH2, Description = Photosystem I reaction center subunit VI-2, chloroplastic, PFAM = PF03244)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00009051ctg001_1-3374' '(p12355|psaf_spiol : 289.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 283.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 282.0) no description available & (reliability: 566.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00010384ctg020_12013-16402' '(at2g46820 : 134.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative CURT1B, Description = Protein CURVATURE THYLAKOID 1B, chloroplastic, PFAM = PF14159)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00028915ctg002_439-4387' '(q41385|psal_spiol : 285.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 284.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 215.0) no description available & (reliability: 568.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00038432ctg000_5756-8996' '(q41228|psaea_nicsy : 164.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 110.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.3) no description available & (reliability: 220.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00271_394312-396638' '(p12355|psaf_spiol : 207.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 195.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 193.0) no description available & (reliability: 390.0) & (original description: Putative psaF, Description = Photosystem I reaction center subunit III, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00271_396316-399223' '(p12355|psaf_spiol : 293.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (gnl|cdd|86009 : 282.0) no description available & (at1g31330 : 280.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00597_619227-622450' '(q41228|psaea_nicsy : 149.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 111.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 93.8) no description available & (reliability: 222.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00851_152847-158796' '(at1g08380 : 189.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf01147_113003-127450' '(gnl|cdd|66888 : 213.0) no description available & (p22179|psah_spiol : 149.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Spinacia oleracea (Spinach) & (at1g52230 : 144.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PSAH, Description = Photosystem I reaction center subunit VI, chloroplastic, PFAM = PF03244)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02147_33037-37453' '(p29302|psad_nicsy : 340.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 267.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 233.0) no description available & (reliability: 534.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, chloroplastic, PFAM = PF02531)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02147_184557-187831' '(p29302|psad_nicsy : 202.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 189.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 177.0) no description available & (reliability: 378.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, PFAM = PF02531)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02293_317717-320157' '(at1g55670 : 193.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 183.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 93.1) no description available & (reliability: 386.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03263_246169-249069' '(q41228|psaea_nicsy : 108.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 105.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 91.9) no description available & (reliability: 210.0) & (original description: Putative psaE, Description = Photosystem I reaction center subunit IV, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03287_192760-197323' '(gnl|cdd|66888 : 210.0) no description available & (at1g52230 : 157.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o04006|psah_brara : 157.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Brassica rapa (Turnip) & (reliability: 314.0) & (original description: Putative PSAH2, Description = Photosystem I reaction center subunit VI-2, chloroplastic, PFAM = PF03244)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03733_357907-360347' '(at1g55670 : 189.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 180.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 91.6) no description available & (reliability: 378.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04172_230845-233348' '(q41229|psaeb_nicsy : 114.0) Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E B) [Contains: Photosystem I reaction center subunit IV B isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 104.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 91.5) no description available & (reliability: 208.0) & (original description: Putative PSAEB, Description = Photosystem I reaction center subunit IV B, chloroplastic, PFAM = PF02427)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04494_126100-139402' '(gnl|cdd|66888 : 209.0) no description available & (p22179|psah_spiol : 155.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Spinacia oleracea (Spinach) & (at1g52230 : 154.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PSAH, Description = Photosystem I reaction center subunit VI, chloroplastic, PFAM = PF03244)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04569_149604-154802' '(at1g30380 : 162.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 147.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 82.4) no description available & (reliability: 324.0) & (original description: Putative PSAK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04964_38519-44936' '(p12355|psaf_spiol : 289.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 284.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 281.0) no description available & (reliability: 568.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05124_126989-127425' '(atcg01060 : 145.0) Encodes the PsaC subunit of photosystem I.; PSAC; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Photosystem I, PsaC (InterPro:IPR017491). & (p62094|psac_tobac : 143.0) Photosystem I iron-sulfur center (Photosystem I subunit VII) (9 kDa polypeptide) (PSI-C) (PsaC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79282 : 141.0) no description available & (reliability: 290.0) & (original description: Putative psaC, Description = Photosystem I iron-sulfur center, PFAM = PF14697)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05737_121825-124442' '(p29302|psad_nicsy : 342.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 262.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 232.0) no description available & (reliability: 524.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, chloroplastic, PFAM = PF02531)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05824_1283011-1336304' '(at1g30380 : 166.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 152.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 84.3) no description available & (reliability: 332.0) & (original description: Putative PSAK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05961_238500-242254' '(q41385|psal_spiol : 285.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 284.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 217.0) no description available & (reliability: 568.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf06919_61156-65386' '(q41385|psal_spiol : 271.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 270.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 216.0) no description available & (reliability: 540.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf08515_120322-122772' '(at1g08380 : 196.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf11670_130395-135469' '(at2g46820 : 135.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative CURT1B, Description = Protein CURVATURE THYLAKOID 1B, chloroplastic, PFAM = PF14159)' T
'1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf17701_191832-195571' '(at5g64040 : 188.0) Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.; PSAN; FUNCTIONS IN: calmodulin binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, photosystem I, chloroplast thylakoid lumen, chloroplast, chloroplast photosystem I; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69027 : 181.0) no description available & (o65107|psan_maize : 153.0) Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) (Fragment) - Zea mays (Maize) & (reliability: 376.0) & (original description: Putative PSAN, Description = Photosystem I reaction center subunit N, chloroplastic, PFAM = PF05479)' T
'1.1.2.3' 'PS.lightreaction.photosystem I.biogenesis' '' ''
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'nbv0.3scaffold37864_15497-20024' '(at5g36120 : 144.0) "cofactor assembly, complex C (B6F)" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative CCB3, Description = AtYLMG3, PFAM = PF02325)' T
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben044scf00006261ctg013_282-2900' '(at2g26500 : 89.0) cytochrome b6f complex subunit (petM), putative; Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative petM, Description = Cytochrome b6-f complex subunit 7, PFAM = PF08041)' T
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf00372_361468-364085' '(at2g26500 : 89.7) cytochrome b6f complex subunit (petM), putative; Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative petM, Description = Cytochrome b6-f complex subunit 7, PFAM = PF08041)' T
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf03929_393987-398919' '(q02585|ucrib_tobac : 385.0) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) - Nicotiana tabacum (Common toba & (at4g03280 : 298.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|58541 : 241.0) no description available & (gnl|cdd|36884 : 152.0) no description available & (reliability: 596.0) & (original description: Putative petC1, Description = Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic, PFAM = PF08802;PF00355)' T
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf08984_65614-71472' '(at5g36120 : 136.0) "cofactor assembly, complex C (B6F)" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative CCB3, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic, PFAM = PF02325)' T
'1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf21348_360-5267' '(q02585|ucrib_tobac : 363.0) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) - Nicotiana tabacum (Common toba & (at4g03280 : 289.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|58541 : 240.0) no description available & (gnl|cdd|36884 : 151.0) no description available & (reliability: 578.0) & (original description: Putative petC1, Description = Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic, PFAM = PF00355;PF08802)' T
'1.1.3.1' 'PS.lightreaction.cytochrome b6/f.iron sulfur subunit' '' ''
'1.1.3.2' 'PS.lightreaction.cytochrome b6/f.subunit 4 (PETD)' '' ''
'1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'nbv0.3scaffold118912_352-2250' '(gnl|cdd|79287 : 304.0) no description available & (q8s8w0|cyb6_atrbe : 303.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 298.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 189.0) no description available & (reliability: 596.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00033)' T
'1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'nbv0.5scaffold3349_257307-260110' '(gnl|cdd|79287 : 415.0) no description available & (q8s8w0|cyb6_atrbe : 408.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 403.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 246.0) no description available & (reliability: 806.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00737;PF00033)' T
'1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'niben101scf00683_466265-468894' '(gnl|cdd|79287 : 311.0) no description available & (q8s8w0|cyb6_atrbe : 307.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 302.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 196.0) no description available & (reliability: 604.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00033)' T
'1.1.3.4' 'PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)' 'niben101scf11178_178869-180375' '(p06449|cyf_tobac : 624.0) Apocytochrome f precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79255 : 622.0) no description available & (atcg00540 : 579.0) Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2.; photosynthetic electron transfer A (PETA); FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; INVOLVED IN: photosynthetic electron transport in cytochrome b6/f; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome f (InterPro:IPR002325), Rudiment single hybrid motif (InterPro:IPR011054). & (reliability: 1158.0) & (original description: Putative petA, Description = Cytochrome f, PFAM = PF16639;PF01333)' T
'1.1.3.5' 'PS.lightreaction.cytochrome b6/f.biogenesis' '' ''
'1.1.4' 'PS.lightreaction.ATP synthase' 'nbv0.5scaffold81_1229883-1236777' '(at2g31040 : 342.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4' 'PS.lightreaction.ATP synthase' 'nbv0.5scaffold2837_72072-81292' '(at2g31040 : 365.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 730.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4' 'PS.lightreaction.ATP synthase' 'niben044scf00001403ctg016_263-4504' '(at2g31040 : 237.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4' 'PS.lightreaction.ATP synthase' 'niben044scf00014776ctg006_4387-14599' '(at2g31040 : 359.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4' 'PS.lightreaction.ATP synthase' 'niben101scf03487_59285-66179' '(at2g31040 : 358.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4' 'PS.lightreaction.ATP synthase' 'niben101scf09559_147615-157776' '(at2g31040 : 374.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T
'1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'nbv0.5scaffold4891_94153-96690' '(gnl|cdd|79276 : 897.0) no description available & (q3c1h4|atpa_nicsy : 817.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 778.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 256.0) no description available & (reliability: 1556.0) & (original description: Putative atpA, Description = ATP synthase subunit alpha, chloroplastic, PFAM = PF02874;PF00306;PF00006)' T
'1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'niben044scf00014241ctg010_1-1337' '(gnl|cdd|79276 : 194.0) no description available & (q3c1h4|atpa_nicsy : 159.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 152.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 125.0) no description available & (reliability: 304.0) & (original description: Putative atpA, Description = ATP synthase F1 sector subunit alpha, PFAM = PF02874)' T
'1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'niben101scf00167_405078-408598' '(gnl|cdd|79276 : 950.0) no description available & (q3c1h4|atpa_nicsy : 879.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 837.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 287.0) no description available & (reliability: 1674.0) & (original description: Putative atpA, Description = ATP synthase subunit alpha, chloroplastic, PFAM = PF00306;PF00006;PF02874)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold260_303433-792580' '(gnl|cdd|79277 : 815.0) no description available & (p69370|atpb_nicpl : 741.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (atcg00480 : 719.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|36564 : 705.0) no description available & (reliability: 1438.0) & (original description: Putative atpB, Description = ATP synthase subunit beta, PFAM = PF00006;PF02874)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold654_453027-455335' '(p69370|atpb_nicpl : 184.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|79277 : 153.0) no description available & (atcg00480 : 151.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|36564 : 97.8) no description available & (reliability: 302.0) & (original description: Putative atpB, Description = ATP synthase CF1 beta subunit, PFAM = PF02874)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold654_453273-455779' '(gnl|cdd|79277 : 210.0) no description available & (gnl|cdd|36564 : 181.0) no description available & (p06541|atpb_chlre : 176.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 162.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 324.0) & (original description: Putative atbB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf00854_1082163-1085431' '(gnl|cdd|82909 : 135.0) no description available & (gnl|cdd|36564 : 117.0) no description available & (q8s8w8|atpb_atrbe : 114.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00480 : 111.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 222.0) & (original description: Putative atpB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf07103_165009-167573' '(gnl|cdd|79277 : 195.0) no description available & (gnl|cdd|36564 : 169.0) no description available & (p06541|atpb_chlre : 162.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 149.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 298.0) & (original description: Putative atbB, Description = ATP synthase subunit beta, PFAM = PF00006)' T
'1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf25536_1-803' '(q3c1j5|atpb_nicsy : 186.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana sylvestris (Wood tobacco) & (atcg00480 : 152.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|79277 : 149.0) no description available & (gnl|cdd|36564 : 98.2) no description available & (reliability: 304.0) & (original description: Putative atpB, Description = ATP synthase beta subunit, PFAM = PF02874)' T
'1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'nbv0.3scaffold115032_122-2528' '(p00834|atpe_tobac : 240.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 227.0) no description available & (atcg00470 : 214.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 140.0) no description available & (reliability: 428.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T
'1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben044scf00018070ctg011_513-2821' '(p00834|atpe_tobac : 179.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 162.0) no description available & (atcg00470 : 157.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 102.0) no description available & (reliability: 314.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T
'1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben101scf03068_5709-8553' '(p00834|atpe_tobac : 243.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 229.0) no description available & (atcg00470 : 218.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36564 : 157.0) no description available & (reliability: 436.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T
'1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben101scf07103_163860-167104' '(p00834|atpe_tobac : 181.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 163.0) no description available & (atcg00470 : 159.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 97.4) no description available & (reliability: 318.0) & (original description: Putative atpB, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF00006;PF02823)' T
'1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'nbv0.5scaffold71_335843-338973' '(p29790|atpg_tobac : 546.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 482.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 350.0) no description available & (gnl|cdd|36744 : 311.0) no description available & (reliability: 964.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T
'1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf04477_160715-164185' '(p29790|atpg_tobac : 459.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 438.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 322.0) no description available & (gnl|cdd|36744 : 272.0) no description available & (reliability: 876.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T
'1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf04477_161390-163886' '(p29790|atpg_tobac : 196.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g15700 : 190.0) One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.; ATPC2; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT4G04640.1); Has 9547 Blast hits to 9544 proteins in 2715 species: Archae - 5; Bacteria - 5540; Metazoa - 280; Fungi - 148; Plants - 177; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink). & (gnl|cdd|84628 : 141.0) no description available & (gnl|cdd|36744 : 123.0) no description available & (reliability: 380.0) & (original description: Putative atpC, Description = F-ATPase gamma subunit, PFAM = PF00231)' T
'1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf14955_21853-24983' '(p29790|atpg_tobac : 577.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 509.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 348.0) no description available & (gnl|cdd|36744 : 307.0) no description available & (reliability: 1018.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T
'1.1.4.5' 'PS.lightreaction.ATP synthase.subunit C' 'niben044scf00011635ctg015_5725-7485' '(gnl|cdd|79278 : 108.0) no description available & (p06286|atph_tobac : 106.0) ATP synthase C chain (EC 3.6.3.14) (Lipid-binding protein) (ATPase subunit III) - Nicotiana tabacum (Common tobacco) & (atcg00140 : 105.0) ATPase III subunit; ATPH; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454), ATPase, F0 complex, subunit C, bacterial/chloroplast (InterPro:IPR005953). & (reliability: 210.0) & (original description: Putative atpH, Description = ATP synthase subunit c, chloroplastic, PFAM = PF00137)' T
'1.1.4.5' 'PS.lightreaction.ATP synthase.subunit C' 'niben101scf08516_298658-300900' '(gnl|cdd|79278 : 110.0) no description available & (p06286|atph_tobac : 83.6) ATP synthase C chain (EC 3.6.3.14) (Lipid-binding protein) (ATPase subunit III) - Nicotiana tabacum (Common tobacco) & (atcg00140 : 83.2) ATPase III subunit; ATPH; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454), ATPase, F0 complex, subunit C, bacterial/chloroplast (InterPro:IPR005953). & (reliability: 166.4) & (original description: Putative atpH, Description = ATP synthase subunit c, chloroplastic, PFAM = PF00137)' T
'1.1.4.6' 'PS.lightreaction.ATP synthase.chloroplastic subunit a' 'nbv0.3scaffold43882_11133-13873' '(gnl|cdd|79264 : 423.0) no description available & (p69372|atpi_tobac : 415.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Nicotiana tabacum (Common tobacco) & (atcg00150 : 391.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (gnl|cdd|39864 : 179.0) no description available & (reliability: 782.0) & (original description: Putative atpI, Description = ATP synthase CF0 subunit IV, PFAM = PF00119)' T
'1.1.4.6' 'PS.lightreaction.ATP synthase.chloroplastic subunit a' 'niben101scf00167_401217-403957' '(gnl|cdd|79264 : 440.0) no description available & (p69372|atpi_tobac : 423.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Nicotiana tabacum (Common tobacco) & (atcg00150 : 399.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (gnl|cdd|39864 : 190.0) no description available & (reliability: 798.0) & (original description: Putative atpI, Description = ATP synthase subunit a, chloroplastic, PFAM = PF00119)' T
'1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'nbv0.3scaffold90212_17-2765' '(p32980|atpd_tobac : 377.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 221.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 150.0) no description available & (gnl|cdd|36875 : 138.0) no description available & (reliability: 442.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T
'1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'niben101scf00960_294937-297851' '(p32980|atpd_tobac : 362.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 216.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 152.0) no description available & (gnl|cdd|36875 : 138.0) no description available & (reliability: 432.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T
'1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'niben101scf15372_2783-5528' '(p32980|atpd_tobac : 361.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 218.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 152.0) no description available & (gnl|cdd|36875 : 140.0) no description available & (reliability: 436.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T
'1.1.4.8' 'PS.lightreaction.ATP synthase.subunit B (ATPF)' 'nbv0.3scaffold98949_757-4029' '(p06290|atpf_tobac : 310.0) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79238 : 297.0) no description available & (atcg00130 : 286.0) ATPase F subunit.; ATPF; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146). & (reliability: 572.0) & (original description: Putative atpF, Description = ATP synthase subunit b, chloroplastic, PFAM = PF00430)' T
'1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben044scf00004717ctg006_33193-35838' '(p31853|atpx_spiol : 125.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 115.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative atpG, Description = Putative uncharacterized protein atpG, PFAM = PF00430)' T
'1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben101scf04786_76975-79634' '(p31853|atpx_spiol : 198.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 160.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|82206 : 88.8) no description available & (reliability: 320.0) & (original description: Putative ATPG, Description = ATP synthase subunit b', chloroplastic, PFAM = PF00430)' T
'1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben101scf07638_122116-124761' '(p31853|atpx_spiol : 155.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 142.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative atpG, Description = Putative uncharacterized protein atpG, PFAM = PF00430)' T
'1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'nbv0.5scaffold2641_184665-195106' '(at5g45040 : 153.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative CYC4, Description = Cytochrome c6, chloroplastic, PFAM = )' T
'1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'niben101scf02174_272304-288679' '(at5g45040 : 220.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative BnaA02g23660D, Description = BnaA02g23660D protein, PFAM = PF13442)' T
'1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'niben101scf03867_212116-222567' '(at5g45040 : 221.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BnaC02g31310D, Description = BnaC02g31310D protein, PFAM = PF13442)' T
'1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00057_12854-15354' '(p16002|plas_pea : 193.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 182.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 141.0) no description available & (reliability: 364.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T
'1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00508_15919-18419' '(p16002|plas_pea : 191.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 182.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 140.0) no description available & (reliability: 364.0) & (original description: Putative PETE, Description = Plastocyanin, PFAM = PF00127)' T
'1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00539_838168-840674' '(p16002|plas_pea : 184.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 181.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 135.0) no description available & (reliability: 362.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T
'1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf03865_58408-60278' '(p35476|plas1_tobac : 183.0) Plastocyanin A'/A'' - Nicotiana tabacum (Common tobacco) & (at1g20340 : 167.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 135.0) no description available & (reliability: 334.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'nbv0.3scaffold61472_2724-7650' '(at5g07950 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'nbv0.5scaffold3941_62738-193202' '(at3g16250 : 182.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative NDF4, Description = Photosynthetic NDH subcomplex B 3, PFAM = PF00111)' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00001068ctg006_50212-52255' '(at5g07950 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00012835ctg000_660-3805' '(at3g16250 : 144.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative BnaA05g23450D, Description = BnaA05g23450D protein, PFAM = PF00111)' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00024164ctg001_1-6283' '(at5g07950 : 154.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf00495_12607-21807' '(at5g07950 : 255.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf01993_920472-922903' '(q9zts2|fer_capan : 216.0) Ferredoxin, chloroplast precursor (PFLP) - Capsicum annuum (Bell pepper) & (at1g60950 : 157.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 314.0) & (original description: Putative SEND33, Description = Ferredoxin-1, chloroplastic, PFAM = PF00111)' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf03864_101696-105280' '(at3g16250 : 184.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative PNSB3, Description = Photosynthetic NDH subunit of subcomplex B 3, chloroplastic, PFAM = PF00111)' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf10476_142307-147261' '(at1g02180 : 228.0) ferredoxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative PGSC0003DMG400001687, Description = Ferredoxin-like protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf10627_57340-61895' '(at1g02180 : 134.0) ferredoxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative MTR_3g105080, Description = Ferredoxin-like protein, PFAM = )' T
'1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf22688_164499-166930' '(q9zts2|fer_capan : 218.0) Ferredoxin, chloroplast precursor (PFLP) - Capsicum annuum (Bell pepper) & (at1g60950 : 159.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 318.0) & (original description: Putative SEND33, Description = Ferredoxin-1, chloroplastic, PFAM = PF00111)' T
'1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf02583_686557-691071' '(o04977|fenr1_tobac : 576.0) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g20020 : 530.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma; LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|36373 : 257.0) no description available & (gnl|cdd|30718 : 165.0) no description available & (reliability: 1060.0) & (original description: Putative CT166, Description = Putative ferredoxin-NADP reductase, PFAM = PF00175)' T
'1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf08609_35031-43169' '(at4g32360 : 641.0) Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Adrenodoxin reductase (InterPro:IPR000759), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADH-dependent glutamate synthase 1 (TAIR:AT5G53460.3); Has 9342 Blast hits to 9327 proteins in 2028 species: Archae - 136; Bacteria - 6683; Metazoa - 218; Fungi - 274; Plants - 105; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink). & (gnl|cdd|37011 : 506.0) no description available & (gnl|cdd|30839 : 136.0) no description available & (reliability: 1282.0) & (original description: Putative MFDR, Description = NADPH:adrenodoxin oxidoreductase, mitochondrial, PFAM = PF07992)' T
'1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf08723_247524-251943' '(o04977|fenr1_tobac : 648.0) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g20020 : 588.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma; LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|36373 : 286.0) no description available & (gnl|cdd|30718 : 192.0) no description available & (reliability: 1176.0) & (original description: Putative fnr, Description = Chloroplast ferredoxin-NADP+ oxidoreductase, PFAM = PF00175)' T
'1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf01460_470887-482647' '(at1g15140 : 342.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 253.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|30889 : 105.0) no description available & (reliability: 684.0) & (original description: Putative pKIWI502, Description = Fruit protein pKIWI502, PFAM = PF00175)' T
'1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf05519_263417-271175' '(at3g09150 : 370.0) Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast.; ELONGATED HYPOCOTYL 2 (HY2); CONTAINS InterPro DOMAIN/s: Ferredoxin-dependent bilin reductase (InterPro:IPR009249); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86999 : 197.0) no description available & (reliability: 740.0) & (original description: Putative HY2, Description = Phytochromobilin:ferredoxin oxidoreductase, chloroplastic, PFAM = PF05996)' T
'1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf12308_91940-100658' '(at1g15140 : 371.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 273.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|30889 : 99.7) no description available & (reliability: 742.0) & (original description: Putative pKIWI502, Description = Fruit protein pKIWI502, PFAM = PF00175)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold5264_26835-29267' '(p12201|ndhj_tobac : 272.0) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79231 : 270.0) no description available & (atcg00420 : 242.0) Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion.; NADH dehydrogenase subunit J (NDHJ); FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: cellular response to sulfate starvation, oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (gnl|cdd|36925 : 163.0) no description available & (reliability: 484.0) & (original description: Putative ndhJ, Description = NAD(P)H-quinone oxidoreductase subunit J, chloroplastic, PFAM = PF00329)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold21070_16259-19713' '(at4g37925 : 235.0) Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (NDH-M); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit M (InterPro:IPR018922); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative ndhM, Description = NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, PFAM = PF10664)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold37024_1-3362' '(at1g74880 : 160.0) Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; NAD(P)H:plastoquinone dehydrogenase complex subunit O (NDH-O); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit O (InterPro:IPR020905); Has 87 Blast hits to 87 proteins in 27 species: Archae - 0; Bacteria - 33; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative ndhO, Description = NAD(P)H-quinone oxidoreductase subunit O, chloroplastic, PFAM = PF11910)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold64956_156-5315' '(at2g01590 : 84.7) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400015899, Description = , PFAM = )' T
'1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.5scaffold7813_44203-46828' '(p06409|ndhk_tobac : 244.0) NAD(P)H-quinone oxidoreductase chain K, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain K) (NADH-plastoquinone oxidoreductase subunit K) - Nicotiana tabacum (Common tobacco) & (atcg00430 : 218.0) Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase.; photosystem II reaction center protein G (PSBG); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, quinone binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, respiratory chain complex I; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial (TAIR:AT5G11770.1). & (gnl|cdd|36900 : 210.0) no description available & (gnl|cdd|81942 : 200.0) no description available & (reliability: 436.0) & (original description: Putative ndhK, Description = NdhK, PFAM = PF01058)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00003145ctg002_1-2097' '(at4g37920 : 181.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At4g37920, Description = Endoribonuclease E-like protein, PFAM = )' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00017275ctg025_473-5439' '(at2g01590 : 102.0) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative CRR3, Description = Chlororespiratory reduction 3, PFAM = )' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00019386ctg000_2182-4539' '(gnl|cdd|79240 : 164.0) no description available & (p52765|nu3c_luplu : 140.0) NAD(P)H-quinone oxidoreductase chain 3, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 3) (NADH-plastoquinone oxidoreductase chain 3) - Lupinus luteus (European yellow lupin) & (atcg00440 : 134.0) Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex; NDHC; FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|39861 : 90.8) no description available & (reliability: 268.0) & (original description: Putative ndhC, Description = NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic, PFAM = PF00507)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00248_201646-207011' '(at5g58260 : 291.0) Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: defense response to fungus, incompatible interaction, NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase, subunit N (InterPro:IPR020874); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative ndhN, Description = NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, PFAM = PF11909)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00313_752379-754106' '(gnl|cdd|79235 : 254.0) no description available & (q32722|nu6c_tobac : 218.0) NAD(P)H-quinone oxidoreductase chain 6, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 6) (NADH-plastoquinone oxidoreductase chain 6) - Nicotiana tabacum (Common tobacco) & (atcg01080 : 187.0) NADH dehydrogenase ND6; NDHG; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 (InterPro:IPR001457). & (reliability: 374.0) & (original description: Putative ndhG, Description = NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic, PFAM = PF00499)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00351_599564-611166' '(at4g37920 : 469.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At4g37920, Description = Uncharacterized protein At4g37920, chloroplastic, PFAM = )' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf01795_915458-931499' '(at1g74880 : 160.0) Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; NAD(P)H:plastoquinone dehydrogenase complex subunit O (NDH-O); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit O (InterPro:IPR020905); Has 87 Blast hits to 87 proteins in 27 species: Archae - 0; Bacteria - 33; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative NDHO, Description = NADH dehydrogenase-like complex O, PFAM = PF11910)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf03786_323856-326329' '(p12201|ndhj_tobac : 308.0) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79231 : 307.0) no description available & (atcg00420 : 278.0) Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion.; NADH dehydrogenase subunit J (NDHJ); FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: cellular response to sulfate starvation, oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (gnl|cdd|36925 : 195.0) no description available & (reliability: 556.0) & (original description: Putative ndhJ, Description = NAD(P)H-quinone oxidoreductase subunit J, chloroplastic, PFAM = PF00329)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf05124_124590-127956' '(gnl|cdd|79230 : 705.0) no description available & (p06262|nu4c_tobac : 655.0) NAD(P)H-quinone oxidoreductase chain 4, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4) - Nicotiana tabacum (Common tobacco) & (atcg01050 : 574.0) Represents a plastid-encoded subunit of a NAD(P)H dehydrogenase complex. Its mRNA is edited at four positions. Translation data is not available for this gene.; NDHD; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase subunit 4 (TAIR:ATMG00580.1). & (gnl|cdd|40042 : 348.0) no description available & (reliability: 1148.0) & (original description: Putative ndhD, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf07488_205034-209325' '(at1g70760 : 189.0) a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 23 (CRR23); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: NAD(P)H dehydrogenase complex (plastoquinone), thylakoid membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit L (InterPro:IPR019654); Has 242 Blast hits to 242 proteins in 68 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ndhL, Description = NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, PFAM = PF10716)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf08753_33232-42494' '(at4g37925 : 233.0) Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (NDH-M); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit M (InterPro:IPR018922); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative ndhM, Description = NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, PFAM = PF10664)' T
'1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf09870_6019-11178' '(at2g01590 : 84.7) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400015899, Description = , PFAM = )' T
'1.1.30' 'PS.lightreaction.state transition' 'nbv0.3scaffold6334_36102-54048' '(at4g02630 : 599.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 1198.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069;PF00010)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben044scf00001139ctg007_4426-8521' '(at1g68830 : 357.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 139.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 714.0) & (original description: Putative SNT, Description = Serine/threonine-protein kinase, PFAM = )' T
'1.1.30' 'PS.lightreaction.state transition' 'niben044scf00010856ctg005_1-5486' '(at1g01540 : 171.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 154.0) no description available & (q8lpb4|pskr_dauca : 102.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 91.0) no description available & (reliability: 330.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben044scf00022228ctg009_12706-16541' '(at1g68830 : 333.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 80.1) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 666.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase stt7, chloroplastic, PFAM = )' T
'1.1.30' 'PS.lightreaction.state transition' 'niben044scf00025441ctg004_1-4934' '(at1g01540 : 540.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 385.0) no description available & (q8lpb4|pskr_dauca : 240.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1080.0) & (original description: Putative Sb06g016790, Description = Putative uncharacterized protein Sb06g016790, PFAM = PF00069)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben044scf00058842ctg000_16102-18266' '(at4g01330 : 88.6) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2). & (reliability: 177.2) & (original description: Putative)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben101scf03114_404347-429852' '(at1g01540 : 287.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 258.0) no description available & (q8l4h4|nork_medtr : 145.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 115.0) no description available & (reliability: 568.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben101scf03254_417959-427775' '(at1g68830 : 844.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 314.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (gnl|cdd|35814 : 172.0) no description available & (gnl|cdd|84488 : 99.6) no description available & (reliability: 1688.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase STN7, chloroplastic, PFAM = PF00069)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben101scf04007_455679-461041' '(at4g02630 : 535.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8lpb4|pskr_dauca : 241.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1070.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben101scf04995_7494-23810' '(at4g02630 : 594.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 386.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1188.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00010;PF00069)' T
'1.1.30' 'PS.lightreaction.state transition' 'niben101scf07576_441549-446760' '(at1g01540 : 667.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 388.0) no description available & (q8lpb4|pskr_dauca : 249.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 160.0) no description available & (reliability: 1330.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.3scaffold62520_9899-11211' '(gnl|cdd|79234 : 144.0) no description available & (p06261|nu4lc_tobac : 112.0) NAD(P)H-quinone oxidoreductase chain 4L, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4L) (NADH-plastoquinone oxidoreductase chain 4L) - Nicotiana tabacum (Common tobacco) & (atcg01070 : 102.0) NADH dehydrogenase ND4L; NDHE; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (reliability: 204.0) & (original description: Putative ndhE, Description = NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic, PFAM = PF00420)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.5scaffold8786_24862-28695' '(gnl|cdd|79267 : 303.0) no description available & (q2vec1|nu2c_soltu : 223.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 209.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 119.0) no description available & (reliability: 418.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.5scaffold8786_26099-28602' '(gnl|cdd|79267 : 277.0) no description available & (q2vec1|nu2c_soltu : 191.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 184.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 111.0) no description available & (reliability: 368.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben044scf00004772ctg005_3565-7292' '(at1g64770 : 378.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF2); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 5 (TAIR:AT1G55370.2). & (reliability: 756.0) & (original description: Putative PNSB2, Description = Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben044scf00032016ctg004_3784-6335' '(gnl|cdd|79250 : 267.0) no description available & (p06254|nu1c_tobac : 265.0) NAD(P)H-quinone oxidoreductase subunit 1, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1) - Nicotiana tabacum (Common tobacco) & (atcg01100 : 219.0) NADH dehydrogenase ND1; NDHA; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1A (TAIR:ATMG01275.1). & (gnl|cdd|39967 : 151.0) no description available & (reliability: 438.0) & (original description: Putative ndhA, Description = NdhA protein, PFAM = PF00146)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf00313_754107-755806' '(p06252|ndhi_tobac : 341.0) NAD(P)H-quinone oxidoreductase subunit I, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79233 : 341.0) no description available & (atcg01090 : 326.0) Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex; NDHI; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, subunit I (InterPro:IPR004497), 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1). & (gnl|cdd|38466 : 222.0) no description available & (reliability: 652.0) & (original description: Putative ndhI, Description = NAD(P)H-quinone oxidoreductase subunit I, chloroplastic, PFAM = PF13187)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf00490_144016-150689' '(at4g22890 : 439.0) Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-LIKE A; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 112 Blast hits to 112 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative PGRL1A, Description = PGR5-like protein 1A, chloroplastic, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01054_322518-327377' '(at3g15840 : 354.0) Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.; post-illumination chlorophyll fluorescence increase (PIFI); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlororespiration; LOCATED IN: chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 708.0) & (original description: Putative PIFI, Description = Post-illumination chlorophyll fluorescence increase protein, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01111_82276-89082' '(at4g22890 : 397.0) Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-LIKE A; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 112 Blast hits to 112 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative PGRL1A, Description = PGR5-like protein 1A, chloroplastic, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01164_173367-175900' '(q2vec1|nu2c_soltu : 249.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 243.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|79267 : 228.0) no description available & (gnl|cdd|39867 : 89.2) no description available & (reliability: 486.0) & (original description: Putative ndhB, Description = NADH-plastoquinone oxidoreductase subunit 2, PFAM = PF00361)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01556_311211-317372' '(at4g22260 : 452.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29780 : 251.0) no description available & (reliability: 904.0) & (original description: Putative AOX4, Description = Ubiquinol oxidase 4, chloroplastic/chromoplastic, PFAM = PF01786)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf02762_220229-223975' '(gnl|cdd|79236 : 810.0) no description available & (p12133|ndhh_tobac : 796.0) NAD(P)H-quinone oxidoreductase chain H, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) - Nicotiana tabacum (Common tobacco) & (atcg01110 : 739.0) Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4.; NAD(P)H dehydrogenase subunit H (NDHH); FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase subunit 7 (TAIR:ATMG00510.1). & (gnl|cdd|38081 : 590.0) no description available & (reliability: 1478.0) & (original description: Putative ndhH, Description = NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, PFAM = PF00346;PF00146)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf02762_221764-225649' '(gnl|cdd|79250 : 628.0) no description available & (q3c1p9|nu1c_nicsy : 574.0) NAD(P)H-quinone oxidoreductase subunit 1, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1) - Nicotiana sylvestris (Wood tobacco) & (atcg01100 : 500.0) NADH dehydrogenase ND1; NDHA; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1A (TAIR:ATMG01275.1). & (gnl|cdd|39967 : 321.0) no description available & (reliability: 1000.0) & (original description: Putative ndhA, Description = NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic, PFAM = PF00146)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf03546_10320-16663' '(at4g22260 : 425.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29780 : 249.0) no description available & (reliability: 850.0) & (original description: Putative AOX4, Description = Ubiquinol oxidase 4, chloroplastic/chromoplastic, PFAM = PF01786)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf04875_19327-21826' '(gnl|cdd|79267 : 176.0) no description available & (q9ld71|nu2c_spiol : 112.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Spinacia oleracea (Spinach) & (atcg01250 : 108.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (reliability: 216.0) & (original description: Putative ndh2, Description = NAD(P)H dehydrogenase subunit 2, PFAM = PF00361)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf05124_127426-128859' '(gnl|cdd|79234 : 157.0) no description available & (p06261|nu4lc_tobac : 120.0) NAD(P)H-quinone oxidoreductase chain 4L, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4L) (NADH-plastoquinone oxidoreductase chain 4L) - Nicotiana tabacum (Common tobacco) & (atcg01070 : 110.0) NADH dehydrogenase ND4L; NDHE; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (gnl|cdd|39868 : 80.7) no description available & (reliability: 220.0) & (original description: Putative ndhE, Description = NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic, PFAM = PF00420)' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf09623_30260-34430' '(at1g64770 : 377.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF2); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 5 (TAIR:AT1G55370.2). & (reliability: 754.0) & (original description: Putative PNSB2, Description = Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf10324_197625-201530' '(at2g05620 : 144.0) Involved in electron flow in Photosystem I. Essential for photoprotection.; proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGR5, Description = Proton gradient regulation 5, PFAM = )' T
'1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf20959_1-1862' '(gnl|cdd|79267 : 228.0) no description available & (q9ld71|nu2c_spiol : 169.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Spinacia oleracea (Spinach) & (atcg01250 : 161.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 85.0) no description available & (reliability: 322.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T
'1.1.50' 'PS.lightreaction.NPQ' '' ''
'1.1.60' 'PS.lightreaction.state transition' '' ''
'1.1.70' 'PS.lightreaction.hydrogenase' '' ''
'1.1.70.1' 'PS.lightreaction.hydrogenase.FeFe-hydrogenase' '' ''
'1.1.70.2' 'PS.lightreaction.hydrogenase.NiFe-hydrogenase' '' ''
'1.1.99' 'PS.lightreaction.unspecified' '' ''
'1.1.99.1' 'PS.lightreaction.unspecified.TEF' '' ''
'1.1.1001' 'PS.lightreaction' 'phytol' 'PS.lightreaction, chlorophyll' M
'1.1.1002' 'PS.lightreaction.binding proteins.Chlorophyll a' 'chlorophyll a' 'PS.lightreaction, chlorophyll' M
'1.1.1003' 'PS.lightreaction.binding proteins.Chlorophyll b' 'chlorophyll b' 'PS.lightreaction, chlorophyll' M
'1.1.1004' 'PS.lightreaction.PS II.PQ' 'decyl-plastoquinone' 'PS.lightreaction' M
'1.2' 'PS.photorespiration' 'niben101scf03710_635081-641440' '(at4g17360 : 470.0) encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.; Formyl transferase; FUNCTIONS IN: methyltransferase activity, hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: tetrahydrofolate metabolic process, purine ribonucleotide biosynthetic process, biosynthetic process, photorespiration; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Formyltetrahydrofolate deformylase (InterPro:IPR004810), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: formyltetrahydrofolate deformylase, putative (TAIR:AT5G47435.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81819 : 292.0) no description available & (gnl|cdd|38286 : 191.0) no description available & (reliability: 940.0) & (original description: Putative purU, Description = Formyltetrahydrofolate deformylase, PFAM = PF00551)' T
'1.2' 'PS.photorespiration' 'niben101scf03772_255373-267109' '(at4g17360 : 473.0) encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.; Formyl transferase; FUNCTIONS IN: methyltransferase activity, hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: tetrahydrofolate metabolic process, purine ribonucleotide biosynthetic process, biosynthetic process, photorespiration; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Formyltetrahydrofolate deformylase (InterPro:IPR004810), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: formyltetrahydrofolate deformylase, putative (TAIR:AT5G47435.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81819 : 290.0) no description available & (gnl|cdd|38286 : 202.0) no description available & (reliability: 946.0) & (original description: Putative PURU2, Description = Formyltetrahydrofolate deformylase 2, mitochondrial, PFAM = PF00551)' T
'1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben044scf00001361ctg005_36749-45221' '(at5g36700 : 401.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 334.0) no description available & (gnl|cdd|30992 : 204.0) no description available & (reliability: 802.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13242;PF13344)' T
'1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben101scf08947_105531-117042' '(at5g36700 : 493.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 391.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 986.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13344;PF13242)' T
'1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben101scf11126_855389-863617' '(at5g36700 : 489.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 392.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 978.0) & (original description: Putative PGP, Description = Phosphoglycolate phosphatase, PFAM = PF13242;PF13344)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00001920ctg014_28684-31544' '(gnl|cdd|35758 : 161.0) no description available & (at3g14150 : 158.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink). & (gnl|cdd|85224 : 129.0) no description available & (p05414|gox_spiol : 124.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 316.0) & (original description: Putative go1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00001920ctg014_28933-33558' '(at3g14130 : 541.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 525.0) no description available & (gnl|cdd|85224 : 433.0) no description available & (p05414|gox_spiol : 429.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1082.0) & (original description: Putative GLO3, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO3, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00043092ctg002_77-5699' '(p05414|gox_spiol : 621.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 615.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 582.0) no description available & (gnl|cdd|85224 : 501.0) no description available & (reliability: 1230.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf00622_14191-22429' '(at4g18360 : 641.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 9948 Blast hits to 9918 proteins in 1541 species: Archae - 28; Bacteria - 4496; Metazoa - 367; Fungi - 686; Plants - 255; Viruses - 0; Other Eukaryotes - 4116 (source: NCBI BLink). & (p05414|gox_spiol : 630.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (gnl|cdd|35758 : 586.0) no description available & (gnl|cdd|85224 : 502.0) no description available & (reliability: 1282.0) & (original description: Putative GLO5, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO5, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf00897_165734-171136' '(p05414|gox_spiol : 647.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 644.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 583.0) no description available & (gnl|cdd|85224 : 504.0) no description available & (reliability: 1288.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf01517_529099-534771' '(p05414|gox_spiol : 627.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 619.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 583.0) no description available & (gnl|cdd|85224 : 500.0) no description available & (reliability: 1238.0) & (original description: Putative GLO5, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO5, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf04174_493908-499254' '(p05414|gox_spiol : 648.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 645.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 584.0) no description available & (gnl|cdd|85224 : 504.0) no description available & (reliability: 1290.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf05396_791187-795464' '(at3g14420 : 426.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (p05414|gox_spiol : 421.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (gnl|cdd|35758 : 400.0) no description available & (gnl|cdd|85224 : 348.0) no description available & (reliability: 852.0) & (original description: Putative go, Description = Hydroxyacid oxidase 1, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf07798_319241-325315' '(at3g14130 : 541.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 520.0) no description available & (gnl|cdd|85224 : 442.0) no description available & (p05414|gox_spiol : 428.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1082.0) & (original description: Putative GOX, Description = Peroxisomal glycolate oxidase, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf18000_37063-43238' '(at3g14130 : 539.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 522.0) no description available & (gnl|cdd|85224 : 431.0) no description available & (p05414|gox_spiol : 429.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1078.0) & (original description: Putative GLO3, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO3, PFAM = PF01070)' T
'1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf18000_42790-48158' '(at3g14150 : 500.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink). & (gnl|cdd|35758 : 482.0) no description available & (gnl|cdd|85224 : 407.0) no description available & (p05414|gox_spiol : 398.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1000.0) & (original description: Putative go1, Description = Hydroxyacid oxidase 1, PFAM = PF01070)' T
'1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T
'1.2.4' 'PS.photorespiration.glycine cleavage' '' ''
'1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'nbv0.5scaffold133_924529-932013' '(o49954|gcsp_soltu : 1897.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1755.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1652.0) no description available & (gnl|cdd|81549 : 1565.0) no description available & (reliability: 3510.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'niben044scf00007101ctg007_1-8662' '(o49954|gcsp_soltu : 1903.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1756.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1660.0) no description available & (gnl|cdd|81549 : 1577.0) no description available & (reliability: 3512.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'niben101scf03839_441005-451014' '(o49954|gcsp_soltu : 1943.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1792.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1685.0) no description available & (gnl|cdd|81549 : 1602.0) no description available & (reliability: 3584.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'1.2.4.2' 'PS.photorespiration.glycine cleavage.T subunit' 'niben044scf00013023ctg008_22232-26386' '(p54260|gcst_soltu : 819.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 740.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 530.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1480.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF08669;PF01571)' T
'1.2.4.2' 'PS.photorespiration.glycine cleavage.T subunit' 'niben101scf02145_1055454-1060904' '(p54260|gcst_soltu : 825.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 743.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 531.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1486.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF01571;PF08669)' T
'1.2.4.3' 'PS.photorespiration.glycine cleavage.L subunit' '' ''
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'nbv0.3scaffold81479_1-4032' '(p49359|gcsh_flapr : 253.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 234.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 208.0) no description available & (gnl|cdd|85558 : 168.0) no description available & (reliability: 468.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben044scf00005087ctg027_101-3807' '(p49359|gcsh_flapr : 251.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 233.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 206.0) no description available & (gnl|cdd|85558 : 168.0) no description available & (reliability: 466.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben044scf00016874ctg009_15674-21895' '(at2g35120 : 222.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (p49359|gcsh_flapr : 199.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|38583 : 199.0) no description available & (gnl|cdd|80837 : 165.0) no description available & (reliability: 444.0) & (original description: Putative GDH2, Description = Glycine cleavage system H protein 2, mitochondrial, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf00526_62827-66628' '(p49359|gcsh_flapr : 256.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 236.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 212.0) no description available & (gnl|cdd|85558 : 170.0) no description available & (reliability: 472.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf01125_123419-128463' '(at2g35120 : 214.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|38583 : 192.0) no description available & (p49359|gcsh_flapr : 187.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|80837 : 169.0) no description available & (reliability: 428.0) & (original description: Putative gcvH, Description = Glycine cleavage system H protein, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf01526_333859-337750' '(p49359|gcsh_flapr : 253.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 238.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 213.0) no description available & (gnl|cdd|85558 : 170.0) no description available & (reliability: 476.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T
'1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf02156_1555216-1563511' '(at2g35120 : 222.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (p49359|gcsh_flapr : 200.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|38583 : 196.0) no description available & (gnl|cdd|80837 : 164.0) no description available & (reliability: 444.0) & (original description: Putative GDH2, Description = Glycine cleavage system H protein 2, mitochondrial, PFAM = PF01597)' T
'1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'niben101scf04539_106467-112667' '(at4g32520 : 830.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 776.0) no description available & (gnl|cdd|64334 : 602.0) no description available & (p34899|glym_pea : 565.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1660.0) & (original description: Putative for, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'niben101scf07116_93796-99821' '(at4g32520 : 832.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 781.0) no description available & (gnl|cdd|64334 : 604.0) no description available & (p50433|glym_soltu : 570.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1664.0) & (original description: Putative SHM3, Description = Serine hydroxymethyltransferase 3, chloroplastic, PFAM = PF00464)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'nbv0.3scaffold55838_1699-4786' '(at2g45630 : 296.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31252 : 247.0) no description available & (gnl|cdd|35292 : 241.0) no description available & (p13443|dhgy_cucsa : 94.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 592.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'nbv0.5scaffold5168_51616-63703' '(at1g79870 : 404.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 307.0) no description available & (gnl|cdd|31252 : 289.0) no description available & (p13443|dhgy_cucsa : 98.2) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 808.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00024878ctg003_91-5434' '(at1g79870 : 351.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|31252 : 229.0) no description available & (gnl|cdd|35292 : 218.0) no description available & (reliability: 702.0) & (original description: Putative ghrB, Description = D-isomer specific 2-hydroxyacid dehydrogenase, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00034734ctg004_3105-6162' '(at1g12550 : 325.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT2G45630.2); Has 29393 Blast hits to 29385 proteins in 2729 species: Archae - 468; Bacteria - 18116; Metazoa - 729; Fungi - 1168; Plants - 597; Viruses - 5; Other Eukaryotes - 8310 (source: NCBI BLink). & (gnl|cdd|35292 : 262.0) no description available & (gnl|cdd|31252 : 247.0) no description available & (q07511|fdh_soltu : 90.5) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 650.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00041863ctg001_1-4336' '(at1g79870 : 456.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 311.0) no description available & (gnl|cdd|31252 : 296.0) no description available & (p13443|dhgy_cucsa : 95.5) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 912.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf00490_137418-140747' '(at1g12550 : 328.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT2G45630.2); Has 29393 Blast hits to 29385 proteins in 2729 species: Archae - 468; Bacteria - 18116; Metazoa - 729; Fungi - 1168; Plants - 597; Viruses - 5; Other Eukaryotes - 8310 (source: NCBI BLink). & (gnl|cdd|35292 : 268.0) no description available & (gnl|cdd|31252 : 254.0) no description available & (q9sxp2|fdh1_orysa : 94.4) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf01374_131119-135283' '(at1g79870 : 461.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 317.0) no description available & (gnl|cdd|31252 : 299.0) no description available & (p13443|dhgy_cucsa : 97.4) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 922.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf01718_101438-107286' '(at1g68010 : 669.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 660.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 288.0) no description available & (gnl|cdd|84741 : 249.0) no description available & (reliability: 1338.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf03287_57140-73598' '(at1g79870 : 391.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 298.0) no description available & (gnl|cdd|31252 : 285.0) no description available & (p13443|dhgy_cucsa : 92.8) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 782.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf04494_95866-104203' '(at1g79870 : 377.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 284.0) no description available & (gnl|cdd|31252 : 276.0) no description available & (p13443|dhgy_cucsa : 102.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 754.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf04494_103474-110165' '(at1g79870 : 399.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 300.0) no description available & (gnl|cdd|31252 : 284.0) no description available & (p13443|dhgy_cucsa : 95.1) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 798.0) & (original description: Putative ghrB, Description = Hydroxyacid dehydrogenase, PFAM = PF02826;PF00389;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf05709_121365-146222' '(at1g79870 : 423.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 284.0) no description available & (gnl|cdd|31252 : 284.0) no description available & (p13443|dhgy_cucsa : 92.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 846.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06024_40842-45429' '(at2g45630 : 355.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35292 : 289.0) no description available & (gnl|cdd|31252 : 262.0) no description available & (q67u69|fdh2_orysa : 80.5) Formate dehydrogenase 2, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) - Oryza sativa (Rice) & (reliability: 710.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06024_61073-67261' '(at2g45630 : 372.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35292 : 282.0) no description available & (gnl|cdd|31252 : 254.0) no description available & (q67u69|fdh2_orysa : 104.0) Formate dehydrogenase 2, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) - Oryza sativa (Rice) & (reliability: 744.0) & (original description: Putative Sb06g000620, Description = Putative uncharacterized protein Sb06g000620, PFAM = PF00389;PF02826)' T
'1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06809_165015-177590' '(at1g68010 : 683.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 675.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 291.0) no description available & (gnl|cdd|84741 : 254.0) no description available & (reliability: 1366.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826)' T
'1.2.7' 'PS.photorespiration.glycerate kinase' 'niben101scf02572_356106-361205' '(at1g80380 : 560.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38089 : 356.0) no description available & (gnl|cdd|33963 : 182.0) no description available & (reliability: 1120.0) & (original description: Putative GLYK, Description = D-glycerate 3-kinase, chloroplastic, PFAM = )' T
'1.2.7' 'PS.photorespiration.glycerate kinase' 'niben101scf18107_45768-51109' '(at1g80380 : 553.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38089 : 353.0) no description available & (gnl|cdd|33963 : 178.0) no description available & (reliability: 1106.0) & (original description: Putative GLYK, Description = D-glycerate 3-kinase, chloroplastic-like protein, PFAM = )' T
'1.2.1001' 'PS.photorespiration.glycerate' 'glycerate' 'PS.photorepiration; lipid metabolism; amino acid degradation.serine; amino acid degradation.glycine; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'1.2.1002' 'PS.photorepiration.glycolate' 'glycolate' 'PS.photorepiration' M
'1.2.1003' 'PS.photorepiration.glycine' 'glycine' 'PS.photorepiration; amino acid synthesis.serine; amino acid synthesis.glycine; amino acid degradation.glycine; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M
'1.2.1004' 'PS.photorepiration.serine' 'serine' 'PS.photorepiration; lipid metabolism; amino acid degradation.homoserine; amino acid synthesis.serine; amino acid degradation.serine; amino acid degradation.methionine; S-assimilation' M
'1.2.1005' 'PS.photorepiration.glyoxylate' 'glyoxylate' 'PS.photorepiration' M
'1.2.1006' 'PS.photorepiration.hydroxypyruvate' 'hydroxypyruvate' 'PS.photorepiration' M
'1.3' 'PS.calvin cycle' 'niben044scf00039233ctg001_1867-4262' '(at3g62410 : 115.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 92.1) no description available & (reliability: 230.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T
'1.3' 'PS.calvin cycle' 'niben101scf04819_415131-417526' '(gnl|cdd|66366 : 91.0) no description available & (at3g62410 : 89.7) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T
'1.3' 'PS.calvin cycle' 'niben101scf08918_22140-24529' '(at3g62410 : 117.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 85.2) no description available & (reliability: 234.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T
'1.3' 'PS.calvin cycle' 'niben101scf16582_23225-25602' '(at3g62410 : 101.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 84.8) no description available & (reliability: 202.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.3scaffold30914_16121-18987' '(gnl|cdd|79258 : 559.0) no description available & (q8ru60|rbl_atrbe : 535.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00490 : 511.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1022.0) & (original description: Putative cbbL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.3scaffold105889_1738-3365' '(gnl|cdd|79258 : 251.0) no description available & (p00876|rbl_tobac : 217.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 198.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 396.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.5scaffold1343_52537-55967' '(gnl|cdd|79258 : 979.0) no description available & (p00876|rbl_tobac : 971.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 919.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1838.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.5scaffold1353_422214-425646' '(gnl|cdd|79258 : 409.0) no description available & (p00876|rbl_tobac : 378.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 357.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 714.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF00016;PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben044scf00003163ctg005_13786-15132' '(o62964|rbl_vigun : 164.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Vigna unguiculata (Cowpea) & (gnl|cdd|79258 : 161.0) no description available & (atcg00490 : 160.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 320.0) & (original description: Putative cbbL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben044scf00059984ctg000_9322-11933' '(gnl|cdd|79258 : 302.0) no description available & (p00876|rbl_tobac : 299.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 295.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 590.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF02788;PF00016)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf00173_978477-981108' '(gnl|cdd|79258 : 576.0) no description available & (p00876|rbl_tobac : 549.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 525.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1050.0) & (original description: Putative rbcl, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf00568_524204-527593' '(gnl|cdd|79258 : 391.0) no description available & (p00876|rbl_tobac : 347.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 327.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 654.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF00016;PF02788)' T
'1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf25930_26847-31089' '(gnl|cdd|79258 : 171.0) no description available & (p25079|rbl_soltu : 141.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Solanum tuberosum (Potato) & (atcg00490 : 125.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 250.0) & (original description: Putative rbcL, Description = Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, PFAM = PF02788)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold35646_18458-21312' '(p26573|rbs8_nicpl : 322.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 265.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 530.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold37187_9122-19927' '(p10053|rbs_pinth : 193.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (at1g67090 : 188.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58643 : 162.0) no description available & (reliability: 376.0) & (original description: Putative RBCS, Description = Ribulose bisphosphate carboxylase small chain, chloroplastic, PFAM = PF00101)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold52809_6070-8914' '(p22433|rbs2_nicsy : 332.0) Ribulose bisphosphate carboxylase small chain S41, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) - Nicotiana sylvestris (Wood tobacco) & (at5g38410 : 274.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 548.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.5scaffold506_734596-805634' '(p26573|rbs8_nicpl : 316.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 259.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 518.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf01831_23298-36401' '(q40250|rbs_lacsa : 190.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Lactuca sativa (Garden lettuce) & (at1g67090 : 186.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58643 : 161.0) no description available & (reliability: 372.0) & (original description: Putative RBCS, Description = Ribulose bisphosphate carboxylase small chain, chloroplastic, PFAM = PF00101)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf01991_428250-515955' '(p26573|rbs8_nicpl : 319.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 263.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 160.0) no description available & (reliability: 526.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf03015_590471-593294' '(p26573|rbs8_nicpl : 335.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 270.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 156.0) no description available & (reliability: 540.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf04196_58405-60860' '(p26573|rbs8_nicpl : 343.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 275.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 550.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T
'1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf04196_83421-86404' '(p69249|rbs_tobac : 343.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) - Nicotiana tabacum (Common tobacco) & (at5g38410 : 279.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 558.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'nbv0.3scaffold84109_1-4617' '(q42961|pgkh_tobac : 851.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 711.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 581.0) no description available & (gnl|cdd|36581 : 544.0) no description available & (reliability: 1422.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02139_377272-387984' '(gnl|cdd|80491 : 186.0) no description available & (p12783|pgky_wheat : 172.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) & (at3g12780 : 164.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (gnl|cdd|36581 : 151.0) no description available & (reliability: 328.0) & (original description: Putative PGSC0003DMG400003882, Description = Phosphoglycerate kinase, PFAM = PF00162;PF02390)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02461_6816-12166' '(q42962|pgky_tobac : 728.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 664.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 585.0) no description available & (gnl|cdd|36581 : 530.0) no description available & (reliability: 1268.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02461_21557-26261' '(q42961|pgkh_tobac : 853.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 708.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 582.0) no description available & (gnl|cdd|36581 : 545.0) no description available & (reliability: 1416.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf03856_11161-16555' '(q42962|pgky_tobac : 705.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 655.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 588.0) no description available & (gnl|cdd|36581 : 535.0) no description available & (reliability: 1278.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf05295_574572-580226' '(q42962|pgky_tobac : 706.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 661.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 589.0) no description available & (gnl|cdd|36581 : 540.0) no description available & (reliability: 1296.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'1.3.4' 'PS.calvin cycle.GAP' 'nbv0.5scaffold9390_7631-16882' '(p12859|g3pb_pea : 717.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 690.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 494.0) no description available & (gnl|cdd|35876 : 290.0) no description available & (reliability: 1380.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic, PFAM = PF00044;PF02800)' T
'1.3.4' 'PS.calvin cycle.GAP' 'niben101scf03133_7775-12877' '(p12859|g3pb_pea : 712.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 692.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 503.0) no description available & (gnl|cdd|35876 : 290.0) no description available & (reliability: 1384.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic, PFAM = PF02800;PF02672;PF00044)' T
'1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05177_276043-280333' '(p09043|g3pa_tobac : 661.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at1g12900 : 610.0) glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1). & (gnl|cdd|76080 : 496.0) no description available & (gnl|cdd|35876 : 301.0) no description available & (reliability: 1220.0) & (original description: Putative gapA, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T
'1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05188_312371-317970' '(p09043|g3pa_tobac : 664.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g26650 : 611.0) Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).; glyceraldehyde 3-phosphate dehydrogenase A subunit (GAPA); FUNCTIONS IN: protein binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (TAIR:AT1G12900.1); Has 24893 Blast hits to 24884 proteins in 6192 species: Archae - 47; Bacteria - 10870; Metazoa - 2226; Fungi - 2780; Plants - 3758; Viruses - 0; Other Eukaryotes - 5212 (source: NCBI BLink). & (gnl|cdd|76080 : 494.0) no description available & (gnl|cdd|35876 : 300.0) no description available & (reliability: 1222.0) & (original description: Putative GAPA, Description = Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, PFAM = PF02800;PF00044)' T
'1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05226_403421-408477' '(p12859|g3pb_pea : 710.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 690.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 501.0) no description available & (gnl|cdd|35876 : 288.0) no description available & (reliability: 1380.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic, PFAM = PF02800;PF02672;PF00044)' T
'1.3.5' 'PS.calvin cycle.TPI' 'niben044scf00008157ctg005_616-4608' '(p48496|tpic_spiol : 359.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 348.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 329.0) no description available & (gnl|cdd|73362 : 283.0) no description available & (reliability: 696.0) & (original description: Putative TPI, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T
'1.3.5' 'PS.calvin cycle.TPI' 'niben044scf00017105ctg002_1-5289' '(p48496|tpic_spiol : 504.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 463.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 388.0) no description available & (gnl|cdd|73362 : 330.0) no description available & (reliability: 926.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T
'1.3.5' 'PS.calvin cycle.TPI' 'niben101scf01847_217327-223783' '(p48496|tpic_spiol : 506.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 464.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 391.0) no description available & (gnl|cdd|73362 : 331.0) no description available & (reliability: 928.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T
'1.3.5' 'PS.calvin cycle.TPI' 'niben101scf04327_100702-108973' '(p48496|tpic_spiol : 485.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 450.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 394.0) no description available & (gnl|cdd|73362 : 332.0) no description available & (reliability: 900.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.3scaffold39997_10712-15185' '(gnl|cdd|84661 : 618.0) no description available & (at4g26530 : 603.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 594.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 583.0) no description available & (reliability: 1206.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.3scaffold41032_7542-12672' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 590.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 579.0) no description available & (reliability: 1194.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.5scaffold1469_367538-372476' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 592.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 583.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 576.0) no description available & (reliability: 1184.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00004219ctg018_5933-10852' '(at4g38970 : 672.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 648.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 610.0) no description available & (gnl|cdd|36770 : 556.0) no description available & (reliability: 1344.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00028064ctg000_4428-9998' '(at4g38970 : 670.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 615.0) no description available & (gnl|cdd|36770 : 563.0) no description available & (reliability: 1340.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00042047ctg002_6186-10929' '(at4g38970 : 661.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 654.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 618.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1322.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1104.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1106.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00466_40644-46031' '(at4g38970 : 669.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 614.0) no description available & (gnl|cdd|36770 : 561.0) no description available & (reliability: 1338.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00675_158544-163325' '(gnl|cdd|84661 : 616.0) no description available & (at4g26530 : 595.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 587.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 577.0) no description available & (reliability: 1190.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf01025_125422-131732' '(at4g38970 : 674.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 608.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1348.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf01460_237638-242867' '(at2g01140 : 653.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (gnl|cdd|84661 : 611.0) no description available & (q01516|alfc_pea : 600.0) Fructose-bisphosphate aldolase 1, chloroplast precursor (EC 4.1.2.13) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 554.0) no description available & (reliability: 1306.0) & (original description: Putative FBA3, Description = Probable fructose-bisphosphate aldolase 3, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf02864_447736-452230' '(at4g38970 : 662.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 653.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 617.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1324.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1112.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf04024_74325-76633' '(at2g01140 : 164.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (gnl|cdd|84661 : 159.0) no description available & (q01516|alfc_pea : 152.0) Fructose-bisphosphate aldolase 1, chloroplast precursor (EC 4.1.2.13) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 127.0) no description available & (reliability: 328.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf05536_245531-250209' '(at4g38970 : 674.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 650.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 611.0) no description available & (gnl|cdd|36770 : 558.0) no description available & (reliability: 1348.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T
'1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1122.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'nbv0.5scaffold3646_148781-153180' '(p46275|f16p1_pea : 603.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 600.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 477.0) no description available & (gnl|cdd|30130 : 470.0) no description available & (reliability: 1200.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben044scf00029060ctg005_8891-13290' '(p46275|f16p1_pea : 618.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 616.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 477.0) no description available & (gnl|cdd|30130 : 466.0) no description available & (reliability: 1232.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf01406_331041-335551' '(p46275|f16p1_pea : 600.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 599.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 459.0) no description available & (gnl|cdd|30130 : 451.0) no description available & (reliability: 1198.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316;PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf02479_276827-280853' '(o64422|f16p1_orysa : 532.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) & (at3g54050 : 525.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 440.0) no description available & (gnl|cdd|30130 : 432.0) no description available & (reliability: 1050.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf05048_54552-58713' '(q07204|f16p1_brana : 622.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at3g54050 : 615.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 470.0) no description available & (gnl|cdd|30130 : 463.0) no description available & (reliability: 1230.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf10316_235599-239676' '(p46275|f16p1_pea : 625.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 619.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 484.0) no description available & (gnl|cdd|30130 : 471.0) no description available & (reliability: 1238.0) & (original description: Putative FBP, Description = Fructose-1,6-bisphosphatase, chloroplastic, PFAM = PF00316)' T
'1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf14310_1-3533' '(at5g64380 : 528.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36671 : 367.0) no description available & (gnl|cdd|30130 : 352.0) no description available & (p22418|f16p1_spiol : 266.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) & (reliability: 1056.0) & (original description: Putative FBP2, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T
'1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.3scaffold59808_1021-7340' '(q43848|tktc_soltu : 1284.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1196.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 755.0) no description available & (reliability: 2392.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02780;PF02779)' T
'1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.5scaffold3829_360668-368805' '(gnl|cdd|30371 : 849.0) no description available & (at3g60750 : 760.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 756.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 570.0) no description available & (reliability: 1520.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T
'1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.5scaffold6578_45542-52464' '(q43848|tktc_soltu : 1267.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1187.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1011.0) no description available & (gnl|cdd|35743 : 761.0) no description available & (reliability: 2374.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T
'1.3.8' 'PS.calvin cycle.transketolase' 'niben044scf00008412ctg007_1064-7782' '(q43848|tktc_soltu : 1246.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at3g60750 : 1181.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 756.0) no description available & (reliability: 2362.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02780;PF00456;PF02779)' T
'1.3.8' 'PS.calvin cycle.transketolase' 'niben044scf00013564ctg004_1467-8064' '(gnl|cdd|30371 : 834.0) no description available & (at3g60750 : 743.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 737.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 557.0) no description available & (reliability: 1486.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02779)' T
'1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf02280_897752-902927' '(o20252|s17p_spiol : 627.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 603.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 360.0) no description available & (gnl|cdd|36671 : 353.0) no description available & (reliability: 1206.0) & (original description: Putative sbp, Description = Putative sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T
'1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf03500_244965-261091' '(o20252|s17p_spiol : 627.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 622.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 356.0) no description available & (gnl|cdd|36671 : 353.0) no description available & (reliability: 1244.0) & (original description: Putative fbp, Description = Sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T
'1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf05017_597956-622762' '(o20252|s17p_spiol : 607.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 602.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 356.0) no description available & (gnl|cdd|36671 : 352.0) no description available & (reliability: 1204.0) & (original description: Putative fbp, Description = Sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T
'1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf09712_1-4347' '(o20252|s17p_spiol : 613.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 591.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 361.0) no description available & (gnl|cdd|36671 : 356.0) no description available & (reliability: 1182.0) & (original description: Putative fbp, Description = Chloroplast sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T
'1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'nbv0.5scaffold6203_45393-49010' '(at3g04790 : 326.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 263.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 652.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T
'1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf00271_686755-692433' '(at5g44520 : 289.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT3G04790.1); Has 2560 Blast hits to 2560 proteins in 1021 species: Archae - 184; Bacteria - 1763; Metazoa - 86; Fungi - 39; Plants - 144; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|38285 : 178.0) no description available & (gnl|cdd|73164 : 154.0) no description available & (reliability: 578.0) & (original description: Putative RPI4, Description = Probable ribose-5-phosphate isomerase 4, chloroplastic, PFAM = PF06026)' T
'1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf01534_78148-81005' '(at3g04790 : 323.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 264.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 646.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T
'1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf02792_177429-183581' '(at3g04790 : 311.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 262.0) no description available & (gnl|cdd|73164 : 256.0) no description available & (reliability: 622.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026;PF06026)' T
'1.3.11' 'PS.calvin cycle.RPE' 'niben101scf00063_661534-670840' '(q43843|rpe_soltu : 514.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) - Solanum tuberosum (Potato) & (at5g61410 : 459.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81646 : 335.0) no description available & (gnl|cdd|38321 : 289.0) no description available & (reliability: 918.0) & (original description: Putative cbbE, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T
'1.3.11' 'PS.calvin cycle.RPE' 'niben101scf00519_69004-80137' '(q43843|rpe_soltu : 511.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) - Solanum tuberosum (Potato) & (at5g61410 : 459.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81646 : 335.0) no description available & (gnl|cdd|38321 : 290.0) no description available & (reliability: 918.0) & (original description: Putative cbbE, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T
'1.3.12' 'PS.calvin cycle.PRK' 'nbv0.5scaffold2302_31199-257665' '(p26302|kppr_wheat : 679.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 673.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 491.0) no description available & (gnl|cdd|39404 : 232.0) no description available & (reliability: 1346.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T
'1.3.12' 'PS.calvin cycle.PRK' 'niben044scf00031448ctg002_2302-7734' '(p26302|kppr_wheat : 689.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 677.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 494.0) no description available & (gnl|cdd|39404 : 232.0) no description available & (reliability: 1354.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T
'1.3.12' 'PS.calvin cycle.PRK' 'niben101scf10910_29833-37399' '(p26302|kppr_wheat : 684.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 676.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 495.0) no description available & (gnl|cdd|39404 : 231.0) no description available & (reliability: 1352.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'nbv0.3scaffold27787_16526-21670' '(q40565|rca2_tobac : 884.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 714.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 356.0) no description available & (reliability: 1428.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben044scf00034791ctg000_322-4932' '(at3g13470 : 787.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 785.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|48161 : 668.0) no description available & (gnl|cdd|35577 : 569.0) no description available & (reliability: 1562.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01374_613956-619853' '(at1g55490 : 843.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 828.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 702.0) no description available & (gnl|cdd|35577 : 606.0) no description available & (reliability: 1686.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01653_270016-274145' '(q40460|rca1_tobac : 866.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 726.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 345.0) no description available & (reliability: 1452.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01890_121913-130767' '(p21239|rub1_brana : 768.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) - Brassica napus (Rape) & (at2g28000 : 749.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 679.0) no description available & (gnl|cdd|35577 : 540.0) no description available & (reliability: 1498.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf02085_1227084-1230611' '(q40460|rca1_tobac : 638.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 600.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 299.0) no description available & (reliability: 1200.0) & (original description: Putative rca, Description = Ribulose bisphosphate carboxylase/oxygenase activase, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf02583_189731-194469' '(q40460|rca1_tobac : 885.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 746.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 356.0) no description available & (reliability: 1492.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf03076_190333-197524' '(at5g18820 : 715.0) embryo defective 3007 (EMB3007); FUNCTIONS IN: ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin-60alpha (TAIR:AT2G28000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48161 : 662.0) no description available & (p08926|ruba_pea : 651.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (gnl|cdd|35577 : 542.0) no description available & (reliability: 1302.0) & (original description: Putative groL, Description = GroEL protein, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf03607_44928-55910' '(at4g20130 : 648.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 1296.0) & (original description: Putative PTAC14, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14, PFAM = PF00856;PF09273)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf05368_297922-302917' '(q40565|rca2_tobac : 877.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 709.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 357.0) no description available & (reliability: 1418.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf05712_205270-211394' '(p94026|rbcmt_tobac : 939.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 603.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|36551 : 185.0) no description available & (gnl|cdd|87855 : 128.0) no description available & (reliability: 1206.0) & (original description: Putative RBCMT, Description = Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic, PFAM = PF00856;PF09273)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf07141_45609-64177' '(at1g73110 : 589.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, ATP binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1); Has 469 Blast hits to 469 proteins in 170 species: Archae - 27; Bacteria - 71; Metazoa - 17; Fungi - 60; Plants - 256; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|35870 : 318.0) no description available & (p93431|rca_orysa : 312.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (reliability: 1178.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf07309_36636-43237' '(p08926|ruba_pea : 811.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 798.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 702.0) no description available & (gnl|cdd|35577 : 574.0) no description available & (reliability: 1596.0) & (original description: Putative groL1, Description = 60 kDa chaperonin 1, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf08488_271918-276745' '(q40565|rca2_tobac : 700.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 570.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 300.0) no description available & (reliability: 1140.0) & (original description: Putative rca, Description = Rubisco activase, PFAM = PF00004)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf08898_65874-72731' '(at3g13470 : 853.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 834.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|80448 : 702.0) no description available & (gnl|cdd|35577 : 615.0) no description available & (reliability: 1700.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf09363_23979-29438' '(at1g55490 : 840.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 829.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 706.0) no description available & (gnl|cdd|35577 : 612.0) no description available & (reliability: 1680.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf10400_58528-64809' '(p08926|ruba_pea : 823.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 808.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 706.0) no description available & (gnl|cdd|35577 : 576.0) no description available & (reliability: 1616.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T
'1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf28395_64273-68921' '(q40460|rca1_tobac : 808.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 710.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 350.0) no description available & (reliability: 1420.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, PFAM = PF00004)' T
'1.3.1001' 'PS.calvin cycle.ribulose-1,5-bisP' 'ribulose-1,5-bisp' 'major CHO metabolism; PS.calvin cycle' M
'1.3.1002' 'PS.calvin cycle' 'glycerate-3-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M
'1.3.1003' 'PS.calvin cycle' 'glycerate-1,3-bisp' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M
'1.3.1004' 'PS.calvin cycle' 'glyceraldehyde-3-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M
'1.3.1005' 'PS.calvin cycle' 'dihydroxyacetone-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M
'1.3.1006' 'PS.calvin cycle' 'fructose-1,6-bisp' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M
'1.3.1007' 'PS.calvin cycle' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; calvin cycle; glycolysis; OPP.oxidative PP' M
'1.4' 'PS.reductive PP' '' ''
'1.5' 'PS.carbon concentrating mechanism' '' ''
'1.5.1' 'PS.carbon concentrating mechanism.C4' '' ''
'1.5.2' 'PS.carbon concentrating mechanism.CAM' '' ''
'1.5.3' 'PS.carbon concentrating mechanism.algal' '' ''
'2' 'major CHO metabolism' '' ''
'2.1' 'major CHO metabolism.synthesis' '' ''
'2.1.1' 'major CHO metabolism.synthesis.sucrose' '' ''
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'nbv0.3scaffold108520_1-1397' '(at4g10120 : 125.0) Encodes a protein with putative sucrose-phosphate synthase activity.; ATSPS4F; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 3F (TAIR:AT1G04920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p31928|sps_spiol : 82.4) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Spinacia oleracea (Spinach) & (reliability: 250.0) & (original description: Putative sps, Description = Putative sucrose-phosphate synthase 4, PFAM = )' T
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf02024_261065-269823' '(at1g04920 : 1561.0) Encodes a protein with putative sucrose-phosphate synthase activity.; sucrose phosphate synthase 3F (SPS3F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 8635 Blast hits to 8489 proteins in 1558 species: Archae - 393; Bacteria - 5603; Metazoa - 16; Fungi - 85; Plants - 793; Viruses - 0; Other Eukaryotes - 1745 (source: NCBI BLink). & (p31927|sps_maize : 1458.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Zea mays (Maize) & (gnl|cdd|36071 : 370.0) no description available & (gnl|cdd|30787 : 102.0) no description available & (reliability: 3122.0) & (original description: Putative SPS2, Description = Probable sucrose-phosphate synthase 2, PFAM = PF00862;PF05116;PF00534)' T
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf06678_206281-220551' '(q43845|sps_soltu : 1983.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g20280 : 1558.0) Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.; sucrose phosphate synthase 1F (SPS1F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 2F (TAIR:AT5G11110.1); Has 9301 Blast hits to 9184 proteins in 1618 species: Archae - 405; Bacteria - 6026; Metazoa - 10; Fungi - 80; Plants - 739; Viruses - 0; Other Eukaryotes - 2041 (source: NCBI BLink). & (gnl|cdd|36071 : 383.0) no description available & (gnl|cdd|30787 : 97.4) no description available & (reliability: 3116.0) & (original description: Putative SPS, Description = Probable sucrose-phosphate synthase, PFAM = PF00534;PF00862;PF05116)' T
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf10492_149113-157938' '(q43845|sps_soltu : 1392.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g11110 : 1318.0) Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation.; sucrose phosphate synthase 2F (SPS2F); FUNCTIONS IN: sucrose-phosphate synthase activity; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 7063 Blast hits to 6941 proteins in 1362 species: Archae - 321; Bacteria - 4772; Metazoa - 8; Fungi - 55; Plants - 761; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|36071 : 360.0) no description available & (gnl|cdd|30787 : 94.7) no description available & (reliability: 2636.0) & (original description: Putative SPS1, Description = Probable sucrose-phosphate synthase 1, PFAM = PF05116;PF00534;PF00862)' T
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf12754_1289-11965' '(q43845|sps_soltu : 1956.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g20280 : 1549.0) Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.; sucrose phosphate synthase 1F (SPS1F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 2F (TAIR:AT5G11110.1); Has 9301 Blast hits to 9184 proteins in 1618 species: Archae - 405; Bacteria - 6026; Metazoa - 10; Fungi - 80; Plants - 739; Viruses - 0; Other Eukaryotes - 2041 (source: NCBI BLink). & (gnl|cdd|36071 : 381.0) no description available & (gnl|cdd|30787 : 97.4) no description available & (reliability: 3098.0) & (original description: Putative SPS, Description = Probable sucrose-phosphate synthase, PFAM = PF00862;PF05116;PF00534)' T
'2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf18156_18602-28259' '(at4g10120 : 1335.0) Encodes a protein with putative sucrose-phosphate synthase activity.; ATSPS4F; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 3F (TAIR:AT1G04920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p31927|sps_maize : 1082.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Zea mays (Maize) & (gnl|cdd|36071 : 339.0) no description available & (gnl|cdd|30787 : 103.0) no description available & (reliability: 2670.0) & (original description: Putative sps, Description = Sucrose-phosphate synthase, PFAM = PF00534;PF05116;PF00862)' T
'2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'nbv0.3scaffold6112_18692-24348' '(at2g35840 : 633.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 376.0) no description available & (reliability: 1266.0) & (original description: Putative SPP2, Description = Sucrose-phosphatase 2, PFAM = PF08472;PF05116)' T
'2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'nbv0.3scaffold13444_6294-18238' '(at2g35840 : 466.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 248.0) no description available & (reliability: 932.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF08472;PF05116)' T
'2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben044scf00006643ctg011_1756-7578' '(at2g35840 : 593.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 335.0) no description available & (reliability: 1186.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF05116;PF08472)' T
'2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben101scf00911_357883-364155' '(at2g35840 : 630.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 371.0) no description available & (reliability: 1260.0) & (original description: Putative SPP2, Description = Sucrose-phosphatase 2, PFAM = PF05116;PF08472)' T
'2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben101scf01284_193019-207173' '(at2g35840 : 638.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 375.0) no description available & (reliability: 1276.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF05116;PF08472)' T
'2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'nbv0.3scaffold13674_1-5672' '(p46276|f16p2_soltu : 658.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 595.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 495.0) no description available & (reliability: 1190.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T
'2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'niben101scf01150_386235-393068' '(p46276|f16p2_soltu : 654.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 595.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 494.0) no description available & (reliability: 1190.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T
'2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'niben101scf02361_952490-961505' '(p46276|f16p2_soltu : 643.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 606.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 494.0) no description available & (reliability: 1212.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T
'2.1.1.1001' 'major CHO metabolism.synthesis.sucrose' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M
'2.1.1.1002' 'major CHO metabolism.synthesis.sucrose' 'glucose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M
'2.1.1.1003' 'major CHO metabolism.synthesis.sucrose' 'glucose-1-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M
'2.1.1.1004' 'major CHO metabolism.synthesis.sucrose' 'glucose-1,6-bisp' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M
'2.1.1.1005' 'major CHO metabolism.synthesis.sucrose' 'fructose-2,6-bisp' 'major CHO metabolism.synthesis.sucrose' M
'2.1.1.1006' 'major CHO metabolism.synthesis.sucrose' 'udp-glucose' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose' M
'2.1.1.1007' 'major CHO metabolism.synthesis.sucrose' 'sucrose-6-p' 'major CHO metabolism.synthesis.sucrose' M
'2.1.1.1008' 'major CHO metabolism.synthesis.sucrose' 'sucrose' 'major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.sucrose' M
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf01191_160628-165590' '(at1g54940 : 478.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 207.0) no description available & (gnl|cdd|85496 : 118.0) no description available & (reliability: 956.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf02724_636591-649804' '(at5g18480 : 578.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 97.7) no description available & (reliability: 1156.0) & (original description: Putative IPUT1, Description = Inositol phosphorylceramide glucuronosyltransferase 1, PFAM = PF01501)' T
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf03435_247584-257049' '(at5g18480 : 632.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 95.0) no description available & (reliability: 1264.0) & (original description: Putative IPUT1, Description = Inositol phosphorylceramide glucuronosyltransferase 1, PFAM = PF01501)' T
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf04332_5376-14260' '(at5g18480 : 631.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 93.9) no description available & (reliability: 1262.0) & (original description: Putative PGSIP6, Description = Hexosyltransferase, PFAM = PF01501)' T
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf09127_101260-105762' '(at1g54940 : 496.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 208.0) no description available & (gnl|cdd|85496 : 117.0) no description available & (reliability: 992.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T
'2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf09127_105381-110218' '(at1g54940 : 501.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 211.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1002.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.3scaffold4577_26072-33185' '(at1g74910 : 712.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 631.0) no description available & (gnl|cdd|31401 : 187.0) no description available & (reliability: 1424.0) & (original description: Putative mpgB, Description = Mannose-1-phosphate guanylyltransferase, PFAM = PF00132;PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.3scaffold10337_21622-30196' '(at1g74910 : 612.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 562.0) no description available & (gnl|cdd|31401 : 198.0) no description available & (reliability: 1224.0) & (original description: Putative GMPPA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.5scaffold32_1421574-1471725' '(at1g74910 : 637.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 570.0) no description available & (gnl|cdd|31401 : 189.0) no description available & (reliability: 1274.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.5scaffold6282_79705-86046' '(q00081|glgl1_soltu : 812.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 713.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 557.0) no description available & (gnl|cdd|36536 : 397.0) no description available & (reliability: 1426.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00005571ctg000_25291-39536' '(at1g74910 : 637.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 568.0) no description available & (gnl|cdd|31401 : 187.0) no description available & (reliability: 1274.0) & (original description: Putative GMPPA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00011082ctg000_1-7212' '(p55242|glgl2_soltu : 891.0) Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at1g27680 : 749.0) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (gnl|cdd|81051 : 634.0) no description available & (gnl|cdd|36536 : 436.0) no description available & (reliability: 1498.0) & (original description: Putative AGPS2, Description = Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00018336ctg007_6013-12428' '(q00081|glgl1_soltu : 878.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 790.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 615.0) no description available & (gnl|cdd|36536 : 433.0) no description available & (reliability: 1580.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00168_147536-152859' '(at1g05610 : 475.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS2 is a minor small subunit isoform present in all plant tissues tested.; ADP-glucose pyrophosphorylase small subunit 2 (APS2); FUNCTIONS IN: transferase activity, glucose-1-phosphate adenylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase 1 (TAIR:AT5G48300.1); Has 7131 Blast hits to 7129 proteins in 1626 species: Archae - 269; Bacteria - 4720; Metazoa - 15; Fungi - 23; Plants - 1553; Viruses - 0; Other Eukaryotes - 551 (source: NCBI BLink). & (gnl|cdd|81051 : 442.0) no description available & (p52416|glgs1_vicfa : 423.0) Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Vicia faba (Broad bean) & (gnl|cdd|36536 : 302.0) no description available & (reliability: 950.0) & (original description: Putative APS2, Description = Inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00202_186046-192461' '(q00081|glgl1_soltu : 872.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 783.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 613.0) no description available & (gnl|cdd|36536 : 433.0) no description available & (reliability: 1566.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00339_288570-306635' '(at1g74910 : 678.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 610.0) no description available & (gnl|cdd|31401 : 191.0) no description available & (reliability: 1356.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00132;PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf01520_987134-993788' '(p55243|glgl3_soltu : 908.0) Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at5g19220 : 865.0) Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADP glucose pyrophosphorylase large subunit 1 (APL1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: cellulose biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADPGLC-PPase large subunit (TAIR:AT1G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 650.0) no description available & (gnl|cdd|36536 : 438.0) no description available & (reliability: 1730.0) & (original description: Putative AGPS3, Description = Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf01625_168805-175387' '(p23509|glgs_soltu : 949.0) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato) & (at5g48300 : 884.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.; ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 690.0) no description available & (gnl|cdd|36536 : 434.0) no description available & (reliability: 1768.0) & (original description: Putative agp, Description = ADP-glucose pyrophosphorylase, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf02253_1193576-1203242' '(at1g74910 : 715.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 620.0) no description available & (gnl|cdd|31401 : 191.0) no description available & (reliability: 1430.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00132;PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf03671_22979-29764' '(p55243|glgl3_soltu : 906.0) Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at5g19220 : 867.0) Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADP glucose pyrophosphorylase large subunit 1 (APL1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: cellulose biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADPGLC-PPase large subunit (TAIR:AT1G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 655.0) no description available & (gnl|cdd|36536 : 441.0) no description available & (reliability: 1734.0) & (original description: Putative AGPS3, Description = Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf07984_232766-239116' '(p23509|glgs_soltu : 946.0) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato) & (at5g48300 : 884.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.; ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 689.0) no description available & (gnl|cdd|36536 : 434.0) no description available & (reliability: 1768.0) & (original description: Putative agp, Description = ADP-glucose pyrophosphorylase, PFAM = PF00483)' T
'2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf16278_19155-26316' '(at1g74910 : 714.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 631.0) no description available & (gnl|cdd|31401 : 185.0) no description available & (reliability: 1428.0) & (original description: Putative mpgB, Description = Mannose-1-phosphate guanylyltransferase, PFAM = PF00483;PF00132)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'nbv0.3scaffold3325_3875-22159' '(at5g65685 : 491.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 262.0) no description available & (q43846|ssy3_soltu : 191.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 982.0) & (original description: Putative SSV, Description = Soluble starch synthase V, PFAM = PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'nbv0.5scaffold1183_102510-112541' '(q00775|ssg1_soltu : 1070.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Solanum tuberosum (Potato) & (at1g32900 : 883.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (gnl|cdd|80717 : 401.0) no description available & (reliability: 1766.0) & (original description: Putative WAXY, Description = Granule-bound starch synthase 1, chloroplastic/amyloplastic, PFAM = PF08323;PF00534)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben044scf00016941ctg012_40-3039' '(q43847|ssy2_soltu : 351.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato) & (at3g01180 : 126.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative SS2, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = )' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben044scf00031641ctg002_5951-14480' '(p93568|ssy1_soltu : 836.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 726.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 415.0) no description available & (reliability: 1452.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf00069_404672-424724' '(at5g65685 : 492.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 226.0) no description available & (q43846|ssy3_soltu : 157.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 984.0) & (original description: Putative SSV, Description = Soluble starch synthase V, PFAM = PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf01399_34547-60642' '(q43846|ssy3_soltu : 2088.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (at1g11720 : 1440.0) Encodes a starch synthase that in addition to its role in starch biosynthesis also has a negative regulatory function in the biosynthesis of transient starch. The protein apparently contains a starch-binding domain (SBD).; starch synthase 3 (SS3); CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296), Carbohydrate binding domain, family 25 (InterPro:IPR005085); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 477.0) no description available & (reliability: 2880.0) & (original description: Putative SS3, Description = Soluble starch synthase 3, chloroplastic/amyloplastic, PFAM = PF16760;PF16760;PF16760;PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf02836_134210-154004' '(gnl|cdd|80717 : 459.0) no description available & (at4g18240 : 404.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 315.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 808.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf03455_108623-121557' '(at4g18240 : 861.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (gnl|cdd|80717 : 542.0) no description available & (q43846|ssy3_soltu : 393.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 1722.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf04083_81529-100017' '(p93568|ssy1_soltu : 1129.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 890.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 481.0) no description available & (reliability: 1780.0) & (original description: Putative glgA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf05060_473157-487242' '(q43847|ssy2_soltu : 648.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato) & (at3g01180 : 586.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (gnl|cdd|80717 : 361.0) no description available & (reliability: 1172.0) & (original description: Putative pvss22, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf05154_118642-130039' '(p93568|ssy1_soltu : 1078.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 851.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 467.0) no description available & (reliability: 1702.0) & (original description: Putative SS1, Description = Starch synthase isoform 1, PFAM = PF08323;PF00534)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf07939_111492-122092' '(gnl|cdd|80717 : 274.0) no description available & (at4g18240 : 223.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 167.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 446.0) & (original description: Putative glgA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf07939_116508-124056' '(gnl|cdd|80717 : 316.0) no description available & (at4g18240 : 280.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 218.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 560.0) & (original description: Putative GLGA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T
'2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf21165_31872-38303' '(q00775|ssg1_soltu : 1110.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Solanum tuberosum (Potato) & (at1g32900 : 905.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (gnl|cdd|80717 : 405.0) no description available & (reliability: 1810.0) & (original description: Putative WAXY, Description = Granule-bound starch synthase 1, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.3scaffold29341_370-15342' '(at5g03650 : 202.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 176.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 116.0) no description available & (gnl|cdd|30341 : 99.6) no description available & (reliability: 404.0) & (original description: Putative ae1, Description = Starch branching enzyme II, PFAM = PF02922)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.3scaffold34027_9988-18152' '(at2g36390 : 144.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 118.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 288.0) & (original description: Putative ae1, Description = Starch branching enzyme II, PFAM = )' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold1447_33761-57317' '(at3g20440 : 1340.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 528.0) no description available & (p30924|glgb_soltu : 464.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (gnl|cdd|30644 : 255.0) no description available & (reliability: 2680.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF00128;PF02806;PF02922)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold1583_67979-102049' '(at5g03650 : 1303.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1227.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 856.0) no description available & (gnl|cdd|30644 : 360.0) no description available & (reliability: 2606.0) & (original description: Putative GLC3, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922;PF00128;PF02806)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold3542_5882-11398' '(at3g20440 : 492.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 94.6) no description available & (reliability: 984.0) & (original description: Putative BE1, Description = Starch branching enzyme III, PFAM = PF02922)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00001618ctg008_469-20200' '(at3g20440 : 1207.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 469.0) no description available & (q08047|glgb_maize : 408.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|30644 : 225.0) no description available & (reliability: 2414.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF02922;PF00128)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00039093ctg000_3009-7131' '(at5g03650 : 117.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 98.6) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 234.0) & (original description: Putative ae1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00041509ctg002_1347-3727' '(at5g03650 : 178.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 171.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 109.0) no description available & (reliability: 356.0) & (original description: Putative ae1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = )' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf00311_9216-56011' '(at3g20440 : 1348.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 531.0) no description available & (p30924|glgb_soltu : 462.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (gnl|cdd|30644 : 259.0) no description available & (reliability: 2696.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF02922;PF02806;PF00128)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf00712_1723612-1732650' '(p30924|glgb_soltu : 1411.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (at5g03650 : 793.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35691 : 673.0) no description available & (gnl|cdd|30644 : 307.0) no description available & (reliability: 1586.0) & (original description: Putative SBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922;PF02806;PF00128)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf02897_165415-206715' '(at5g03650 : 1308.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1224.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 854.0) no description available & (gnl|cdd|30644 : 358.0) no description available & (reliability: 2616.0) & (original description: Putative GBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02806;PF02922;PF00128)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf03631_199123-208298' '(p30924|glgb_soltu : 1427.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (at5g03650 : 804.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35691 : 668.0) no description available & (gnl|cdd|30644 : 306.0) no description available & (reliability: 1608.0) & (original description: Putative SBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF00128;PF02922;PF02806)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_409456-412718' '(at5g03650 : 184.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 152.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 125.0) no description available & (reliability: 368.0) & (original description: Putative SBE2, Description = Starch branching enzyme 2, PFAM = PF02806)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_409753-456436' '(at5g03650 : 1319.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1228.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 857.0) no description available & (gnl|cdd|30644 : 361.0) no description available & (reliability: 2638.0) & (original description: Putative SBEI, Description = 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic, PFAM = PF00128;PF02806;PF02922)' T
'2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_433104-447154' '(at5g03650 : 206.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 181.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 120.0) no description available & (gnl|cdd|30341 : 103.0) no description available & (reliability: 412.0) & (original description: Putative v1g77598, Description = Predicted protein, PFAM = PF02922)' T
'2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'nbv0.3scaffold2337_58609-74704' '(at2g39930 : 1161.0) Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.; isoamylase 1 (ISA1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast, chloroplast isoamylase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 17979 Blast hits to 17918 proteins in 2410 species: Archae - 161; Bacteria - 15130; Metazoa - 257; Fungi - 410; Plants - 747; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|35691 : 605.0) no description available & (gnl|cdd|31712 : 580.0) no description available & (reliability: 2322.0) & (original description: Putative ISA1, Description = Isoamylase 1, chloroplastic, PFAM = PF02922;PF00128)' T
'2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf00914_92145-108146' '(at2g39930 : 1215.0) Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.; isoamylase 1 (ISA1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast, chloroplast isoamylase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 17979 Blast hits to 17918 proteins in 2410 species: Archae - 161; Bacteria - 15130; Metazoa - 257; Fungi - 410; Plants - 747; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|35691 : 643.0) no description available & (gnl|cdd|31712 : 631.0) no description available & (reliability: 2430.0) & (original description: Putative ISA1, Description = Isoamylase 1, chloroplastic, PFAM = PF00128;PF02922)' T
'2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf01509_116799-121384' '(at1g03310 : 867.0) Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.; debranching enzyme 1 (DBE1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35691 : 378.0) no description available & (gnl|cdd|31712 : 349.0) no description available & (reliability: 1734.0) & (original description: Putative ISA2, Description = Isoamylase 2, chloroplastic, PFAM = PF02922;PF00128)' T
'2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf04776_83592-88006' '(at1g03310 : 891.0) Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.; debranching enzyme 1 (DBE1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35691 : 395.0) no description available & (gnl|cdd|31712 : 360.0) no description available & (reliability: 1782.0) & (original description: Putative ISA2, Description = Isoamylase 2, chloroplastic, PFAM = PF02922;PF00128)' T
'2.1.2.5' 'major CHO metabolism.synthesis.starch.transporter' '' ''
'2.1.2.60' 'major CHO metabolism.synthesis.starch.ADP Glucose Phosphorylase' 'niben101scf07155_19643-27407' '(at5g18200 : 381.0) encodes an adenylyltransferase; UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases; CONTAINS InterPro DOMAIN/s: Galactose-1-phosphate uridyl transferase, N-terminal (InterPro:IPR005849), Histidine triad-like motif (InterPro:IPR011146), Galactose-1-phosphate uridyl transferase, class I (InterPro:IPR001937), Histidine triad motif (InterPro:IPR011151); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29587 : 303.0) no description available & (gnl|cdd|38169 : 288.0) no description available & (reliability: 762.0) & (original description: Putative At5g18200, Description = ADP-glucose phosphorylase, PFAM = PF01087)' T
'2.1.2.1001' 'major CHO metabolism.synthesis.starch' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M
'2.1.2.1002' 'major CHO metabolism.synthesis.starch' 'glucose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M
'2.1.2.1003' 'major CHO metabolism.synthesis.starch' 'glucose-1-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M
'2.1.2.1004' 'major CHO metabolism.synthesis.starch' 'adp-glucose' 'major CHO metabolism.synthesis.starch' M
'2.2' 'major CHO metabolism.degradation' '' ''
'2.2.1' 'major CHO metabolism.degradation.sucrose' '' ''
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben044scf00023820ctg001_2933-7354' '(at5g51830 : 508.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink). & (q944f4|scrk1_orysa : 434.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (gnl|cdd|38066 : 377.0) no description available & (gnl|cdd|29351 : 337.0) no description available & (reliability: 1016.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben044scf00036753ctg000_1-4038' '(at3g54090 : 671.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 1 (FLN1); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleus, chloroplast, nucleoid, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: fructokinase-like 2 (TAIR:AT1G69200.1); Has 4776 Blast hits to 4772 proteins in 1393 species: Archae - 92; Bacteria - 3898; Metazoa - 5; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink). & (gnl|cdd|38066 : 309.0) no description available & (gnl|cdd|29351 : 295.0) no description available & (q944f4|scrk1_orysa : 189.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1342.0) & (original description: Putative FLN1, Description = Fructokinase-like 1, chloroplastic, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf00069_1593678-1601455' '(at1g66430 : 439.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (gnl|cdd|38066 : 355.0) no description available & (gnl|cdd|29351 : 302.0) no description available & (q6xz78|scrk2_maize : 298.0) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2) - Zea mays (Maize) & (reliability: 878.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf00217_16064-23051' '(p37829|scrk_soltu : 581.0) Fructokinase (EC 2.7.1.4) - Solanum tuberosum (Potato) & (at3g59480 : 561.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT2G31390.1); Has 19806 Blast hits to 19802 proteins in 2455 species: Archae - 383; Bacteria - 15070; Metazoa - 140; Fungi - 136; Plants - 477; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (gnl|cdd|38066 : 407.0) no description available & (gnl|cdd|29351 : 356.0) no description available & (reliability: 1122.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf01258_251957-256188' '(p37829|scrk_soltu : 336.0) Fructokinase (EC 2.7.1.4) - Solanum tuberosum (Potato) & (at1g06030 : 332.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06020.1); Has 18996 Blast hits to 18990 proteins in 2425 species: Archae - 390; Bacteria - 14287; Metazoa - 160; Fungi - 120; Plants - 469; Viruses - 0; Other Eukaryotes - 3570 (source: NCBI BLink). & (gnl|cdd|38066 : 239.0) no description available & (gnl|cdd|29351 : 216.0) no description available & (reliability: 664.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf02151_527563-532685' '(at1g69200 : 548.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 2 (FLN2); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: fructokinase-like 1 (TAIR:AT3G54090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38066 : 268.0) no description available & (gnl|cdd|29351 : 258.0) no description available & (q944f4|scrk1_orysa : 148.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1096.0) & (original description: Putative FLN2, Description = Fructokinase-like 2, chloroplastic, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf03949_136260-140669' '(at4g10260 : 491.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink). & (q944f5|scrk2_orysa : 481.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|38066 : 370.0) no description available & (gnl|cdd|29351 : 351.0) no description available & (reliability: 982.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf04782_232234-238548' '(at1g66430 : 516.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (gnl|cdd|38066 : 392.0) no description available & (q944f5|scrk2_orysa : 375.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|29351 : 346.0) no description available & (reliability: 1032.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05298_26193-30585' '(at3g54090 : 671.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 1 (FLN1); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleus, chloroplast, nucleoid, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: fructokinase-like 2 (TAIR:AT1G69200.1); Has 4776 Blast hits to 4772 proteins in 1393 species: Archae - 92; Bacteria - 3898; Metazoa - 5; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink). & (gnl|cdd|38066 : 308.0) no description available & (gnl|cdd|29351 : 294.0) no description available & (q944f4|scrk1_orysa : 188.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1342.0) & (original description: Putative FLN1, Description = Fructokinase-like 1, chloroplastic, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05414_255663-260971' '(at1g69200 : 552.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 2 (FLN2); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: fructokinase-like 1 (TAIR:AT3G54090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38066 : 266.0) no description available & (gnl|cdd|29351 : 258.0) no description available & (q944f4|scrk1_orysa : 157.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1104.0) & (original description: Putative FLN2, Description = Fructokinase-like 2, chloroplastic, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05552_220670-236999' '(at5g51830 : 530.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink). & (q944f4|scrk1_orysa : 405.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (gnl|cdd|38066 : 366.0) no description available & (gnl|cdd|29351 : 334.0) no description available & (reliability: 1060.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05809_63246-67249' '(at4g10260 : 487.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink). & (q944f5|scrk2_orysa : 480.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|38066 : 365.0) no description available & (gnl|cdd|29351 : 346.0) no description available & (reliability: 974.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T
'2.2.1.3' 'major CHO metabolism.degradation.sucrose.invertases' '' ''
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold5960_13258-21944' '(at5g22510 : 875.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 818.0) no description available & (reliability: 1750.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold29938_17852-24086' '(at4g09510 : 1000.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 793.0) no description available & (reliability: 2000.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold32081_2875-9451' '(at4g34860 : 983.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 759.0) no description available & (reliability: 1966.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold70249_122-6971' '(at1g56560 : 942.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|68428 : 840.0) no description available & (reliability: 1884.0) & (original description: Putative ni2, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold79244_158-3318' '(at3g05820 : 179.0) Encodes a putative plastid-targeted alkaline/neutral invertase.; invertase H (INVH); FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 687 Blast hits to 684 proteins in 100 species: Archae - 0; Bacteria - 137; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|68428 : 145.0) no description available & (reliability: 358.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.5scaffold382_717341-724899' '(at4g09510 : 850.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 718.0) no description available & (reliability: 1700.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.5scaffold3926_187973-194827' '(at1g56560 : 945.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|68428 : 843.0) no description available & (reliability: 1890.0) & (original description: Putative ni3, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00000503ctg002_14623-22002' '(at4g34860 : 978.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 754.0) no description available & (reliability: 1956.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00019301ctg001_1-1661' '(at1g72000 : 368.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G22650.1); Has 697 Blast hits to 694 proteins in 99 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|68428 : 323.0) no description available & (reliability: 736.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00044503ctg004_1537-5508' '(at4g34860 : 131.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 123.0) no description available & (reliability: 262.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf00883_1327256-1329555' '(at4g34860 : 182.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 147.0) no description available & (reliability: 364.0) & (original description: Putative inv1, Description = Neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf01681_358669-360995' '(at4g34860 : 135.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 127.0) no description available & (reliability: 270.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf02175_584568-590854' '(at4g34860 : 915.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 732.0) no description available & (reliability: 1830.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf02272_250396-256534' '(at4g09510 : 851.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 718.0) no description available & (reliability: 1702.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf04117_1110728-1118792' '(at4g09510 : 1000.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 794.0) no description available & (reliability: 2000.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf08621_193208-200373' '(at4g09510 : 1005.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 784.0) no description available & (reliability: 2010.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf11778_92467-100996' '(at5g22510 : 876.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 819.0) no description available & (reliability: 1752.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf13029_277843-287952' '(at5g22510 : 914.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 832.0) no description available & (reliability: 1828.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf13332_30359-36498' '(at4g34860 : 959.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 753.0) no description available & (reliability: 1918.0) & (original description: Putative SNI1, Description = Neutral/alkaline invertase 1, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf16108_1112-8440' '(at4g09510 : 818.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 642.0) no description available & (reliability: 1636.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T
'2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf16888_133287-138976' '(at4g34860 : 972.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 759.0) no description available & (reliability: 1944.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.3scaffold70519_651-8246' '(p26792|inv1_dauca : 825.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 729.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 677.0) no description available & (gnl|cdd|47917 : 443.0) no description available & (reliability: 1458.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244;PF00251)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.5scaffold2635_61626-66988' '(p26792|inv1_dauca : 821.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 721.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 660.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1442.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.5scaffold3896_61517-165064' '(at1g55120 : 121.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 112.0) no description available & (q56ud1|inv5_orysa : 107.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative aleh2, Description = Cell wall invertase, PFAM = PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben044scf00025049ctg001_2230-5266' '(at1g55120 : 225.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 207.0) no description available & (q56ud1|inv5_orysa : 197.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 426.0) & (original description: Putative lin5, Description = Cell wall invertase, PFAM = PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf02078_872250-878620' '(at3g13790 : 602.0) Encodes a protein with invertase activity.; ATBFRUCT1; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1). & (gnl|cdd|35449 : 597.0) no description available & (p26792|inv1_dauca : 540.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (gnl|cdd|47917 : 374.0) no description available & (reliability: 1204.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF00251;PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf02459_960350-962734' '(at1g55120 : 110.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (q56ud1|inv5_orysa : 94.4) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (gnl|cdd|35449 : 93.5) no description available & (reliability: 198.8) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf04632_325314-332521' '(p26792|inv1_dauca : 818.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 708.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 671.0) no description available & (gnl|cdd|47917 : 444.0) no description available & (reliability: 1416.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF08244;PF00251)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf05314_180470-188918' '(p26792|inv1_dauca : 826.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 729.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 675.0) no description available & (gnl|cdd|47917 : 442.0) no description available & (reliability: 1458.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf09089_110262-116962' '(p26792|inv1_dauca : 769.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 667.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 648.0) no description available & (gnl|cdd|47917 : 425.0) no description available & (reliability: 1334.0) & (original description: Putative INV1, Description = Cell wall invertase 1, PFAM = PF08244;PF00251)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf12270_229283-236142' '(p26792|inv1_dauca : 842.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at2g36190 : 726.0) cwINV4 appears to function as a cell wall-localized invertase (that can catalyze the hydrolysis of sucrose into fructose and glucose) based on the phenotype of cwinv4 mutants. cwINV4 transcripts are expressed at high levels in lateral and median nectaries and this enzyme plays an important role in nectar production.; cell wall invertase 4 (cwINV4); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 2 (TAIR:AT3G52600.1); Has 4207 Blast hits to 4168 proteins in 1243 species: Archae - 18; Bacteria - 2607; Metazoa - 78; Fungi - 284; Plants - 1032; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|35449 : 693.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1452.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf13856_950-6594' '(p26792|inv1_dauca : 795.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at2g36190 : 709.0) cwINV4 appears to function as a cell wall-localized invertase (that can catalyze the hydrolysis of sucrose into fructose and glucose) based on the phenotype of cwinv4 mutants. cwINV4 transcripts are expressed at high levels in lateral and median nectaries and this enzyme plays an important role in nectar production.; cell wall invertase 4 (cwINV4); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 2 (TAIR:AT3G52600.1); Has 4207 Blast hits to 4168 proteins in 1243 species: Archae - 18; Bacteria - 2607; Metazoa - 78; Fungi - 284; Plants - 1032; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|35449 : 665.0) no description available & (gnl|cdd|47917 : 450.0) no description available & (reliability: 1418.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244;PF00251)' T
'2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf19719_62644-68008' '(p26792|inv1_dauca : 812.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 718.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 660.0) no description available & (gnl|cdd|47917 : 450.0) no description available & (reliability: 1436.0) & (original description: Putative CWINV4, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV4, PFAM = PF08244;PF00251)' T
'2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf03167_200083-206535' '(p29001|inva_phaau : 823.0) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] - Phaseolus au & (at1g12240 : 783.0) ATBETAFRUCT4; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G62660.1); Has 4142 Blast hits to 4085 proteins in 1233 species: Archae - 18; Bacteria - 2511; Metazoa - 93; Fungi - 293; Plants - 1044; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35449 : 595.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1566.0) & (original description: Putative lin9, Description = Invertase, PFAM = PF00251;PF11837;PF08244)' T
'2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf03853_272133-280045' '(p93761|inv1_capan : 1063.0) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) - Capsicum annuum (Bell pepper) & (at1g62660 : 718.0) Glycosyl hydrolases family 32 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G12240.1); Has 4144 Blast hits to 4103 proteins in 1239 species: Archae - 18; Bacteria - 2530; Metazoa - 92; Fungi - 278; Plants - 1040; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35449 : 570.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1436.0) & (original description: Putative vi, Description = Vacuolar invertase, PFAM = PF00251;PF11837;PF08244)' T
'2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf05030_592492-601105' '(p93761|inv1_capan : 1058.0) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) - Capsicum annuum (Bell pepper) & (at1g62660 : 717.0) Glycosyl hydrolases family 32 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G12240.1); Has 4144 Blast hits to 4103 proteins in 1239 species: Archae - 18; Bacteria - 2530; Metazoa - 92; Fungi - 278; Plants - 1040; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35449 : 571.0) no description available & (gnl|cdd|47917 : 447.0) no description available & (reliability: 1434.0) & (original description: Putative vi, Description = Vacuolar invertase, PFAM = PF00251;PF11837;PF08244)' T
'2.2.1.3.30' 'major CHO metabolism.degradation.sucrose.invertases.inhibitors' '' ''
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.3scaffold56039_3640-10077' '(q9sq76|hxk2_soltu : 834.0) Hexokinase-2 (EC 2.7.1.1) (StHK2) - Solanum tuberosum (Potato) & (at2g19860 : 644.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 534.0) no description available & (gnl|cdd|34631 : 327.0) no description available & (reliability: 1288.0) & (original description: Putative HXK2, Description = Hexokinase-2, PFAM = PF03727;PF00349)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.3scaffold89902_57-5454' '(q6q8a5|hxk2_tobac : 933.0) Hexokinase-2, chloroplast precursor (EC 2.7.1.1) (NtHxK2) - Nicotiana tabacum (Common tobacco) & (at1g47840 : 600.0) Encodes a putative hexokinase.; hexokinase 3 (HXK3); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2416 Blast hits to 2143 proteins in 322 species: Archae - 0; Bacteria - 89; Metazoa - 1294; Fungi - 612; Plants - 287; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36583 : 502.0) no description available & (gnl|cdd|34631 : 308.0) no description available & (reliability: 1200.0) & (original description: Putative HXK2, Description = Hexokinase-2, chloroplastic, PFAM = PF03727;PF00349)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.5scaffold138_1086324-1094774' '(q9sek2|hxk1_tobac : 883.0) Hexokinase-1 (EC 2.7.1.1) (NtHxK1) - Nicotiana tabacum (Common tobacco) & (at2g19860 : 658.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 541.0) no description available & (gnl|cdd|34631 : 338.0) no description available & (reliability: 1316.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF03727;PF00349)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.5scaffold8020_42865-52081' '(at1g50460 : 577.0) hexokinase-like 1 (HKL1); FUNCTIONS IN: hexokinase activity, ATP binding; INVOLVED IN: response to salt stress, response to cold, response to osmotic stress; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: Hexokinase (TAIR:AT3G20040.1); Has 2396 Blast hits to 2128 proteins in 324 species: Archae - 0; Bacteria - 92; Metazoa - 1286; Fungi - 598; Plants - 287; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (q2knb4|hxk3_orysa : 523.0) Hexokinase-3 (EC 2.7.1.1) (Hexokinase-8) - Oryza sativa (Rice) & (gnl|cdd|36583 : 509.0) no description available & (gnl|cdd|34631 : 311.0) no description available & (reliability: 1154.0) & (original description: Putative hxk1, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf01539_388017-395035' '(q9sq76|hxk2_soltu : 828.0) Hexokinase-2 (EC 2.7.1.1) (StHK2) - Solanum tuberosum (Potato) & (at2g19860 : 645.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 535.0) no description available & (gnl|cdd|34631 : 331.0) no description available & (reliability: 1290.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF00349;PF03727)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf02417_669177-680037' '(at4g37840 : 476.0) Encodes a putative hexokinase.; hexokinase-like 3 (HKL3); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2260 Blast hits to 1998 proteins in 311 species: Archae - 0; Bacteria - 87; Metazoa - 1224; Fungi - 560; Plants - 263; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9sek3|hxk1_spiol : 403.0) Hexokinase-1 (EC 2.7.1.1) (SoHxK1) - Spinacia oleracea (Spinach) & (gnl|cdd|36583 : 380.0) no description available & (gnl|cdd|34631 : 205.0) no description available & (reliability: 952.0) & (original description: Putative hxk2, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf06509_244858-250841' '(at2g19860 : 730.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (q9sek3|hxk1_spiol : 709.0) Hexokinase-1 (EC 2.7.1.1) (SoHxK1) - Spinacia oleracea (Spinach) & (gnl|cdd|36583 : 535.0) no description available & (gnl|cdd|34631 : 345.0) no description available & (reliability: 1460.0) & (original description: Putative HXK2, Description = Hexokinase-2, PFAM = PF00349;PF03727)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf10650_276003-283135' '(q9sek2|hxk1_tobac : 881.0) Hexokinase-1 (EC 2.7.1.1) (NtHxK1) - Nicotiana tabacum (Common tobacco) & (at2g19860 : 646.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 538.0) no description available & (gnl|cdd|34631 : 332.0) no description available & (reliability: 1292.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF00349;PF03727)' T
'2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf12320_535065-544281' '(at1g50460 : 577.0) hexokinase-like 1 (HKL1); FUNCTIONS IN: hexokinase activity, ATP binding; INVOLVED IN: response to salt stress, response to cold, response to osmotic stress; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: Hexokinase (TAIR:AT3G20040.1); Has 2396 Blast hits to 2128 proteins in 324 species: Archae - 0; Bacteria - 92; Metazoa - 1286; Fungi - 598; Plants - 287; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (q2knb4|hxk3_orysa : 523.0) Hexokinase-3 (EC 2.7.1.1) (Hexokinase-8) - Oryza sativa (Rice) & (gnl|cdd|36583 : 509.0) no description available & (gnl|cdd|34631 : 311.0) no description available & (reliability: 1154.0) & (original description: Putative hxk1, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'nbv0.5scaffold1372_373659-379938' '(p49039|sus2_soltu : 1588.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at3g43190 : 1347.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1007.0) no description available & (gnl|cdd|36071 : 461.0) no description available & (reliability: 2694.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf00887_99760-105451' '(at1g73370 : 1207.0) Encodes a protein with sucrose synthase activity (SUS6).; sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1). & (o24301|sus2_pea : 943.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (gnl|cdd|64713 : 694.0) no description available & (gnl|cdd|36071 : 444.0) no description available & (reliability: 2414.0) & (original description: Putative SUS6, Description = Sucrose synthase 6, PFAM = PF00862;PF00534)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf01623_123627-136871' '(o24301|sus2_pea : 1417.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (at4g02280 : 1395.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|64713 : 978.0) no description available & (gnl|cdd|36071 : 467.0) no description available & (reliability: 2790.0) & (original description: Putative sus2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf04910_172562-178950' '(p49039|sus2_soltu : 1588.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at3g43190 : 1351.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1009.0) no description available & (gnl|cdd|36071 : 465.0) no description available & (reliability: 2702.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00862;PF00534)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf06757_61560-67596' '(at1g73370 : 1223.0) Encodes a protein with sucrose synthase activity (SUS6).; sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1). & (o24301|sus2_pea : 967.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (gnl|cdd|64713 : 690.0) no description available & (gnl|cdd|36071 : 427.0) no description available & (reliability: 2446.0) & (original description: Putative SUS7, Description = Sucrose synthase 7, PFAM = PF00862;PF00534)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf06933_92671-99127' '(p10691|sus1_soltu : 1573.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS16) - Solanum tuberosum (Potato) & (at3g43190 : 1367.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1020.0) no description available & (gnl|cdd|36071 : 471.0) no description available & (reliability: 2734.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf09112_377294-390199' '(p49039|sus2_soltu : 488.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at5g20830 : 458.0) Encodes a protein with sucrose synthase activity (SUS1).; sucrose synthase 1 (SUS1); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 4 (TAIR:AT3G43190.1); Has 8160 Blast hits to 8157 proteins in 1636 species: Archae - 294; Bacteria - 5212; Metazoa - 101; Fungi - 72; Plants - 800; Viruses - 0; Other Eukaryotes - 1681 (source: NCBI BLink). & (gnl|cdd|64713 : 429.0) no description available & (gnl|cdd|36071 : 178.0) no description available & (reliability: 916.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00862)' T
'2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf10157_573230-579544' '(p10691|sus1_soltu : 1216.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS16) - Solanum tuberosum (Potato) & (at3g43190 : 1169.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 840.0) no description available & (gnl|cdd|36071 : 426.0) no description available & (reliability: 2338.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T
'2.2.1.99' 'major CHO metabolism.degradation.sucrose.misc' 'nbv0.3scaffold38779_6911-15587' '(at3g27570 : 331.0) Sucrase/ferredoxin-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G40510.1); Has 487 Blast hits to 487 proteins in 162 species: Archae - 6; Bacteria - 90; Metazoa - 0; Fungi - 283; Plants - 71; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|70464 : 215.0) no description available & (reliability: 596.0) & (original description: Putative At3g27570, Description = Sucrase/ferredoxin-like protein, PFAM = PF06999)' T
'2.2.1.99' 'major CHO metabolism.degradation.sucrose.misc' 'niben101scf01849_529796-542112' '(at4g26620 : 464.0) Sucrase/ferredoxin-like family protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G55900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70464 : 216.0) no description available & (reliability: 928.0) & (original description: Putative ferredoxin homolog, Description = Clostridium pasteurianum ferredoxin homolog, PFAM = PF06999)' T
'2.2.1.1001' 'major CHO metabolism.degradation.sucrose' 'fructose' 'major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.sucrose' M
'2.2.1.1002' 'major CHO metabolism.degradation.sucrose' 'glucose' 'cell wall degradation; major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.starch' M
'2.2.2' 'major CHO metabolism.degradation.starch' '' ''
'2.2.2.1' 'major CHO metabolism.degradation.starch.starch cleavage' 'niben101scf00239_520365-555771' '(at3g23640 : 1533.0) heteroglycan glucosidase 1 (HGL1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT5G63840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85212 : 487.0) no description available & (gnl|cdd|36284 : 420.0) no description available & (q653v7|aglu_orysa : 307.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 3066.0) & (original description: Putative BnaCnng35950D, Description = BnaCnng35950D protein, PFAM = PF17137;PF01055;PF13802)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'nbv0.3scaffold22346_5908-25332' '(at1g69830 : 1186.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 390.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 233.0) no description available & (gnl|cdd|84544 : 177.0) no description available & (reliability: 2372.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'nbv0.5scaffold98_738586-827909' '(at4g25000 : 456.0) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).; alpha-amylase-like (AMY1); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: response to gibberellin stimulus, response to abscisic acid stimulus; LOCATED IN: extracellular region, apoplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p04063|amy2_horvu : 451.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|84544 : 177.0) no description available & (gnl|cdd|35692 : 148.0) no description available & (reliability: 912.0) & (original description: Putative amy1, Description = Alpha-amylase, PFAM = PF00128;PF07821)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben044scf00022950ctg001_1-2962' '(at1g76130 : 323.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p08117|amy3_wheat : 148.0) Alpha-amylase AMY3 precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Triticum aestivum (Wheat) & (gnl|cdd|35692 : 117.0) no description available & (gnl|cdd|84544 : 83.9) no description available & (reliability: 646.0) & (original description: Putative amy2, Description = Alpha-amylase, PFAM = PF00128)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf01493_21704-28533' '(at1g76130 : 664.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p04063|amy2_horvu : 365.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|35692 : 203.0) no description available & (gnl|cdd|84544 : 148.0) no description available & (reliability: 1328.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf01580_117632-124092' '(at1g76130 : 685.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p04063|amy2_horvu : 367.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|35692 : 213.0) no description available & (gnl|cdd|84544 : 152.0) no description available & (reliability: 1370.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf06233_209627-226535' '(at1g69830 : 518.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 408.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 197.0) no description available & (gnl|cdd|84544 : 187.0) no description available & (reliability: 1036.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF00128;PF07821)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf09644_55686-73058' '(at1g69830 : 1210.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 388.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 232.0) no description available & (gnl|cdd|84544 : 175.0) no description available & (reliability: 2420.0) & (original description: Putative AMY3, Description = Alpha-amylase 3, chloroplastic, PFAM = PF07821;PF00128)' T
'2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf13798_8159-12433' '(p04063|amy2_horvu : 588.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (at4g25000 : 582.0) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).; alpha-amylase-like (AMY1); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: response to gibberellin stimulus, response to abscisic acid stimulus; LOCATED IN: extracellular region, apoplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84544 : 202.0) no description available & (gnl|cdd|35692 : 188.0) no description available & (reliability: 1164.0) & (original description: Putative amy1, Description = Alpha-amylase, PFAM = PF07821;PF00128)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'nbv0.5scaffold2484_247704-252876' '(at5g18670 : 536.0) putative beta-amylase BMY3 (BMY3); beta-amylase 3 (BMY3); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64407|amyb_vigun : 271.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Vigna unguiculata (Cowpea) & (gnl|cdd|85413 : 227.0) no description available & (reliability: 1072.0) & (original description: Putative bmy1, Description = Beta-amylase, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00002906ctg005_12129-17913' '(at4g17090 : 821.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 469.0) no description available & (o22585|amyb_medsa : 463.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1642.0) & (original description: Putative BAM3, Description = Beta-amylase 3, chloroplastic, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00004712ctg002_1-4998' '(at3g23920 : 872.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 450.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 388.0) no description available & (reliability: 1744.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00008910ctg005_1-4776' '(at4g17090 : 808.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 465.0) no description available & (o22585|amyb_medsa : 448.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1616.0) & (original description: Putative BAM1, Description = Beta-amylase, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00012929ctg009_16171-21148' '(at4g17090 : 819.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 465.0) no description available & (o22585|amyb_medsa : 449.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1638.0) & (original description: Putative bmy2, Description = Beta-amylase, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00015937ctg007_3906-7499' '(at2g45880 : 368.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (o22585|amyb_medsa : 163.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|69223 : 135.0) no description available & (reliability: 736.0) & (original description: Putative bmy2, Description = Beta-amylase, PFAM = PF01373;PF05687)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf00274_102235-107332' '(at3g23920 : 867.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 450.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 387.0) no description available & (reliability: 1734.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf03282_276431-279254' '(gnl|cdd|69223 : 85.9) no description available & (at2g45880 : 85.5) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative BAM6, Description = Beta-amylase, PFAM = PF05687)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf04981_81613-90767' '(at2g45880 : 854.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (o22585|amyb_medsa : 432.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 313.0) no description available & (reliability: 1708.0) & (original description: Putative BAM7, Description = Beta-amylase 7, PFAM = PF01373;PF05687)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf05286_97749-103546' '(p10538|amyb_soybn : 764.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (at2g32290 : 704.0) beta-amylase 6 (BAM6); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 5 (TAIR:AT4G15210.1); Has 842 Blast hits to 841 proteins in 166 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 690; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|85413 : 339.0) no description available & (reliability: 1408.0) & (original description: Putative BMY1, Description = Beta-amylase, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf07346_519007-528116' '(at5g45300 : 804.0) beta-amylase 2 (BMY2); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 1274 Blast hits to 1254 proteins in 201 species: Archae - 0; Bacteria - 92; Metazoa - 229; Fungi - 10; Plants - 856; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (p10538|amyb_soybn : 377.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (gnl|cdd|85413 : 247.0) no description available & (reliability: 1608.0) & (original description: Putative BAM8, Description = Beta-amylase 8, PFAM = PF01373;PF05687)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf10158_160242-167600' '(at4g17090 : 717.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 383.0) no description available & (o22585|amyb_medsa : 379.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1434.0) & (original description: Putative BAM3, Description = Beta-amylase 3, chloroplastic, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf10196_156147-182695' '(at2g45880 : 831.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p10538|amyb_soybn : 421.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (gnl|cdd|85413 : 307.0) no description available & (reliability: 1662.0) & (original description: Putative BAM7, Description = Beta-amylase 7, PFAM = PF01373;PF05687)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf11483_32509-37560' '(at3g23920 : 782.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 451.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 374.0) no description available & (reliability: 1564.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T
'2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf14394_226116-232669' '(at3g23920 : 437.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 320.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 282.0) no description available & (reliability: 874.0) & (original description: Putative BAM3, Description = Beta-amylase, PFAM = PF01373)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'nbv0.5scaffold2086_357360-373313' '(p32811|phsh_soltu : 1589.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 1429.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (gnl|cdd|37310 : 1234.0) no description available & (gnl|cdd|84706 : 1108.0) no description available & (reliability: 2858.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf00978_820471-834577' '(p32811|phsh_soltu : 1585.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 1430.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (gnl|cdd|37310 : 1229.0) no description available & (gnl|cdd|84706 : 1105.0) no description available & (reliability: 2860.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf02289_1020972-1031694' '(p04045|phsl1_soltu : 1721.0) Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-1) - Solanum tuberosum (Potato) & (at3g29320 : 1437.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 1027.0) no description available & (gnl|cdd|84706 : 564.0) no description available & (reliability: 2874.0) & (original description: Putative glgP, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf09107_135058-144558' '(p53535|phsl2_soltu : 1590.0) Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-2) - Solanum tuberosum (Potato) & (at3g29320 : 719.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 635.0) no description available & (gnl|cdd|84706 : 567.0) no description available & (reliability: 1438.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf11552_472481-487467' '(gnl|cdd|37310 : 1042.0) no description available & (gnl|cdd|84706 : 935.0) no description available & (p53537|phsh_vicfa : 798.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Vicia faba (Broad bean) & (at3g46970 : 791.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 1582.0) & (original description: Putative glpV, Description = Glycogen phosphorylase 1, PFAM = PF00343)' T
'2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf14799_198518-209584' '(p04045|phsl1_soltu : 1684.0) Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-1) - Solanum tuberosum (Potato) & (at3g29320 : 1434.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 635.0) no description available & (gnl|cdd|84706 : 567.0) no description available & (reliability: 2868.0) & (original description: Putative PHO2, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'nbv0.3scaffold13956_25873-39276' '(at5g26570 : 1353.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 1310.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (gnl|cdd|81898 : 136.0) no description available & (reliability: 2706.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686;PF01326)' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'nbv0.3scaffold51831_1-11684' '(q9awa5|gwd1_soltu : 2142.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (at1g10760 : 1602.0) Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|85388 : 114.0) no description available & (reliability: 3204.0) & (original description: Putative GWD2, Description = Alpha-glucan water dikinase, PFAM = PF01326)' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben044scf00053437ctg003_1-1334' '(at5g26570 : 145.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 133.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (reliability: 290.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, PFAM = )' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf00047_244829-253853' '(at5g26570 : 538.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 508.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, PFAM = )' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf00270_1593406-1607230' '(at5g26570 : 933.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 902.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (gnl|cdd|81898 : 136.0) no description available & (reliability: 1866.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686;PF01326)' T
'2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf02937_38428-59646' '(q9awa5|gwd1_soltu : 2531.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (at1g10760 : 1650.0) Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|85388 : 114.0) no description available & (reliability: 3300.0) & (original description: Putative R1, Description = Alpha-glucan water dikinase, chloroplastic, PFAM = PF01326)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.3scaffold681_93369-114445' '(at2g40840 : 480.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 166.0) no description available & (reliability: 960.0) & (original description: Putative MALQ, Description = 4-alpha-glucanotransferase, PFAM = PF02446)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.3scaffold27056_8755-13138' '(at5g01260 : 161.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative EFR, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.5scaffold3235_46098-61589' '(q06801|dpep_soltu : 1015.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (at5g64860 : 785.0) Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation.; disproportionating enzyme (DPE1); FUNCTIONS IN: 4-alpha-glucanotransferase activity, cation binding, catalytic activity; INVOLVED IN: response to cold, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme 2 (TAIR:AT2G40840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85992 : 556.0) no description available & (reliability: 1570.0) & (original description: Putative DPEP, Description = 4-alpha-glucanotransferase, chloroplastic/amyloplastic, PFAM = PF02446)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben044scf00032299ctg000_1-13343' '(at2g40840 : 899.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 292.0) no description available & (q06801|dpep_soltu : 103.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 1798.0) & (original description: Putative dpe1, Description = 4-alpha-glucanotransferase, PFAM = PF02446;PF00686;PF00686)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf01101_388585-393221' '(at5g01260 : 162.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative EFR, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf01208_77037-140121' '(at2g40840 : 1393.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 295.0) no description available & (q06801|dpep_soltu : 104.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 2786.0) & (original description: Putative DPE2, Description = 4-alpha-glucanotransferase DPE2, PFAM = PF02446;PF00686;PF00686)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf05412_304538-308921' '(at5g01260 : 164.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative glysoja_049563, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T
'2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf05830_730705-740785' '(q06801|dpep_soltu : 1006.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (at5g64860 : 781.0) Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation.; disproportionating enzyme (DPE1); FUNCTIONS IN: 4-alpha-glucanotransferase activity, cation binding, catalytic activity; INVOLVED IN: response to cold, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme 2 (TAIR:AT2G40840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85992 : 554.0) no description available & (reliability: 1562.0) & (original description: Putative DPE1, Description = 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, PFAM = PF02446)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.3scaffold61356_2954-9116' '(p29463|tpt_soltu : 659.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 598.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 219.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1196.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.5scaffold135_760218-765685' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 465.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 88.3) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.5scaffold364_596468-771156' '(q7xtq5|mex1_orysa : 175.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 162.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben044scf00001418ctg012_571-3803' '(q7xtq5|mex1_orysa : 155.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 142.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben044scf00027736ctg002_883-6691' '(q7xtq5|mex1_orysa : 360.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 357.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf01521_459566-465033' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 466.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 87.9) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf01991_88553-100122' '(at5g16150 : 671.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 288.0) no description available & (gnl|cdd|84502 : 283.0) no description available & (q41144|stc_ricco : 146.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1342.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf02381_593382-605060' '(at5g16150 : 681.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 293.0) no description available & (gnl|cdd|84502 : 284.0) no description available & (q41144|stc_ricco : 148.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1362.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf03427_499967-506870' '(p29463|tpt_soltu : 653.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 602.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 220.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1204.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T
'2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf15995_470386-476685' '(at5g17520 : 341.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xtq5|mex1_orysa : 339.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (reliability: 682.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T
'2.2.2.8' 'major CHO metabolism.degradation.starch.ISA3' 'nbv0.5scaffold3451_130822-181394' '(at4g09020 : 1123.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31712 : 626.0) no description available & (gnl|cdd|35691 : 595.0) no description available & (reliability: 2246.0) & (original description: Putative ISA3, Description = Isoamylase 3, chloroplastic, PFAM = PF00128;PF02922)' T
'2.2.2.8' 'major CHO metabolism.degradation.starch.ISA3' 'nbv0.5scaffold3451_166898-177661' '(at4g09020 : 126.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DBE1, Description = Isoamylase isoform 3, PFAM = )' T
'2.2.2.9' 'major CHO metabolism.degradation.starch.limit dextrinase/ pullulanase' 'niben044scf00009522ctg003_1-2524' '(at5g04360 : 226.0) Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.; limit dextrinase (LDA); FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity; INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type (InterPro:IPR011839), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73; Bacteria - 5462; Metazoa - 45; Fungi - 1; Plants - 262; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|31712 : 93.5) no description available & (gnl|cdd|35691 : 80.8) no description available & (reliability: 452.0) & (original description: Putative acbE, Description = Pullulanase 1, chloroplastic, PFAM = )' T
'2.2.2.9' 'major CHO metabolism.degradation.starch.limit dextrinase/ pullulanase' 'niben101scf00792_10339-34179' '(at5g04360 : 1291.0) Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.; limit dextrinase (LDA); FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity; INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type (InterPro:IPR011839), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73; Bacteria - 5462; Metazoa - 45; Fungi - 1; Plants - 262; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|35691 : 440.0) no description available & (gnl|cdd|31712 : 304.0) no description available & (reliability: 2582.0) & (original description: Putative PU1, Description = Pullulanase 1, chloroplastic, PFAM = PF02922;PF11852)' T
'2.2.2.10' 'major CHO metabolism.degradation.starch.laforin like phosphoglucan phosphatase (SEX4)' 'nbv0.5scaffold2120_218166-234769' '(at3g52180 : 485.0) Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.; STARCH-EXCESS 4 (SEX4); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, polysaccharide binding; INVOLVED IN: protein amino acid dephosphorylation, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G10940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36928 : 94.9) no description available & (reliability: 970.0) & (original description: Putative DSP4, Description = Phosphoglucan phosphatase DSP4, amyloplastic, PFAM = PF16561;PF00782)' T
'2.2.2.10' 'major CHO metabolism.degradation.starch.laforin like phosphoglucan phosphatase (SEX4)' 'niben044scf00017154ctg009_1-5693' '(at3g52180 : 263.0) Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.; STARCH-EXCESS 4 (SEX4); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, polysaccharide binding; INVOLVED IN: protein amino acid dephosphorylation, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G10940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative DSP4, Description = Protein tyrosine protein, PFAM = PF00782)' T
'2.2.2.1001' 'major CHO metabolism.degradation.starch' 'starch (total)' 'cell wall synthesis; major CHO metabolism.degradation.starch' M
'2.2.2.1002' 'major CHO metabolism.degradation.starch' 'maltose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M
'2.2.2.1003' 'major CHO metabolism.degradation.starch' 'isomaltose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M
'2.2.2.1004' 'major CHO metabolism.degradation.starch' 'maltotriose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M
'2.2.10' 'major CHO metabolism.degradation.acetate metabolism' '' ''
'2.2.10.1' 'major CHO metabolism.degradation.acetate metabolism.acetate kinase' '' ''
'2.2.10.2' 'major CHO metabolism.degradation.acetate metabolism.phosphate acetyltransferase' '' ''
'2.2.10.3' 'major CHO metabolism.degradation.acetate metabolism.acetyl-CoA synthetase' '' ''
'3' 'minor CHO metabolism' '' ''
'3.1' 'minor CHO metabolism.raffinose family' '' ''
'3.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases' '' ''
'3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben044scf00007624ctg004_8841-13180' '(at2g47180 : 494.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 226.0) no description available & (gnl|cdd|85496 : 174.0) no description available & (reliability: 988.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T
'3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben044scf00040802ctg001_1-2721' '(at2g47180 : 506.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 242.0) no description available & (gnl|cdd|85496 : 176.0) no description available & (reliability: 1012.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T
'3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben101scf01964_798637-802449' '(at2g47180 : 406.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|85496 : 170.0) no description available & (gnl|cdd|37161 : 161.0) no description available & (reliability: 812.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T
'3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben101scf06412_311278-315202' '(at2g47180 : 514.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 235.0) no description available & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1028.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'nbv0.3scaffold58477_9322-12360' '(at3g28340 : 478.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 186.0) no description available & (reliability: 956.0) & (original description: Putative GATL10, Description = Probable galacturonosyltransferase-like 10, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'nbv0.5scaffold3342_22708-26253' '(at3g06260 : 526.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1052.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00007624ctg004_8841-13180' '(at2g47180 : 494.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 226.0) no description available & (gnl|cdd|85496 : 174.0) no description available & (reliability: 918.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00014979ctg004_31271-34412' '(at3g06260 : 514.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 194.0) no description available & (reliability: 1028.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00039686ctg005_5606-8801' '(at3g06260 : 522.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 191.0) no description available & (reliability: 1044.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00040802ctg001_1-2721' '(at2g47180 : 506.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 242.0) no description available & (gnl|cdd|85496 : 176.0) no description available & (reliability: 932.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00049613ctg000_1-4951' '(at1g13250 : 444.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 3 (GATL3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 4 (TAIR:AT3G06260.1); Has 2168 Blast hits to 2160 proteins in 496 species: Archae - 2; Bacteria - 1004; Metazoa - 285; Fungi - 17; Plants - 765; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 884.0) & (original description: Putative GATL3, Description = Probable galacturonosyltransferase-like 3, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf00621_1097757-1100425' '(at3g06260 : 523.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1046.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf01964_798637-802449' '(at2g47180 : 406.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|85496 : 170.0) no description available & (gnl|cdd|37161 : 161.0) no description available & (reliability: 766.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06280_138066-141151' '(at3g28340 : 490.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 980.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06888_355821-358918' '(at3g06260 : 525.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 194.0) no description available & (reliability: 1050.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06996_260548-264721' '(at3g62660 : 411.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 746.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf09719_46401-49946' '(at3g06260 : 526.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1052.0) & (original description: Putative GLZ1, Description = Hexosyltransferase, PFAM = PF01501)' T
'3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf11037_296082-299778' '(at3g06260 : 530.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1060.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T
'3.1.2' 'minor CHO metabolism.raffinose family.raffinose synthases' '' ''
'3.1.2.1' 'minor CHO metabolism.raffinose family.raffinose synthases.known' 'niben101scf11415_73169-79707' '(gnl|cdd|69227 : 1157.0) no description available & (at5g40390 : 1120.0) Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.; seed imbibition 1-like (SIP1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity; INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein (TAIR:AT5G20250.4); Has 508 Blast hits to 470 proteins in 135 species: Archae - 27; Bacteria - 74; Metazoa - 0; Fungi - 82; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q93xk2|stsyn_pea : 662.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2240.0) & (original description: Putative RFS, Description = Galactinol--sucrose galactosyltransferase, PFAM = PF05691)' T
'3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'nbv0.3scaffold35841_159-6884' '(at1g55740 : 1136.0) seed imbibition 1 (SIP1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 563 Blast hits to 527 proteins in 159 species: Archae - 29; Bacteria - 119; Metazoa - 0; Fungi - 82; Plants - 322; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69227 : 950.0) no description available & (q93xk2|stsyn_pea : 336.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2272.0) & (original description: Putative aga1, Description = Alkaline alpha galactosidase I, PFAM = PF05691)' T
'3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben044scf00043840ctg002_1-2262' '(at3g57520 : 387.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69227 : 315.0) no description available & (q93xk2|stsyn_pea : 137.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 774.0) & (original description: Putative aGa1, Description = Putative glycosyltransferase At1g55740 family, PFAM = PF05691)' T
'3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf03987_2190-23047' '(at3g57520 : 1245.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69227 : 1072.0) no description available & (q93xk2|stsyn_pea : 311.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2490.0) & (original description: Putative RFS2, Description = Probable galactinol--sucrose galactosyltransferase 2, PFAM = PF05691)' T
'3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf05804_487778-494671' '(at5g20250 : 1152.0) encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 10 (DIN10); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1). & (gnl|cdd|69227 : 977.0) no description available & (q93xk2|stsyn_pea : 292.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2304.0) & (original description: Putative RFS6, Description = Probable galactinol--sucrose galactosyltransferase 6, PFAM = PF05691)' T
'3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf08182_206792-214876' '(at1g55740 : 1155.0) seed imbibition 1 (SIP1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 563 Blast hits to 527 proteins in 159 species: Archae - 29; Bacteria - 119; Metazoa - 0; Fungi - 82; Plants - 322; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69227 : 948.0) no description available & (q93xk2|stsyn_pea : 336.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2310.0) & (original description: Putative aga1, Description = Alkaline alpha galactosidase I, PFAM = PF05691)' T
'3.1.3' 'minor CHO metabolism.raffinose family.stachyose synthases' '' ''
'3.1.1001' 'minor CHO metabolism.raffinose family' 'raffinose' 'minor CHO metabolism.raffinose' M
'3.1.1002' 'minor CHO metabolism.raffinose family' 'galactinol' '' M
'3.2' 'minor CHO metabolism.trehalose' '' ''
'3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben044scf00034043ctg008_4410-19582' '(at1g78580 : 1443.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 771.0) no description available & (gnl|cdd|85165 : 668.0) no description available & (reliability: 2886.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T
'3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben101scf01983_662226-676009' '(at1g78580 : 1444.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 769.0) no description available & (gnl|cdd|85165 : 667.0) no description available & (reliability: 2888.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T
'3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben101scf08195_701197-723999' '(at1g78580 : 1386.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 758.0) no description available & (gnl|cdd|85165 : 648.0) no description available & (reliability: 2772.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'nbv0.3scaffold26024_23764-28067' '(at4g39770 : 423.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36268 : 270.0) no description available & (gnl|cdd|66079 : 215.0) no description available & (reliability: 846.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf01252_417025-426923' '(at5g65140 : 492.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 270.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 984.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf01731_691330-695489' '(at5g51460 : 472.0) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 259.0) no description available & (gnl|cdd|66079 : 198.0) no description available & (reliability: 944.0) & (original description: Putative TPPA, Description = Trehalose-phosphate phosphatase A, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf02511_865203-869342' '(at1g35910 : 332.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2331 Blast hits to 2325 proteins in 843 species: Archae - 41; Bacteria - 1347; Metazoa - 218; Fungi - 145; Plants - 454; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36268 : 199.0) no description available & (gnl|cdd|66079 : 179.0) no description available & (reliability: 664.0) & (original description: Putative TPPD, Description = Probable trehalose-phosphate phosphatase D, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf03167_137751-143951' '(at4g22590 : 506.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G12430.1); Has 2353 Blast hits to 2348 proteins in 847 species: Archae - 42; Bacteria - 1327; Metazoa - 222; Fungi - 153; Plants - 482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|36268 : 281.0) no description available & (gnl|cdd|66079 : 202.0) no description available & (reliability: 1012.0) & (original description: Putative TPPG, Description = Probable trehalose-phosphate phosphatase G, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf05030_631352-635548' '(at5g51460 : 518.0) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 289.0) no description available & (gnl|cdd|66079 : 199.0) no description available & (reliability: 1036.0) & (original description: Putative TPPA, Description = Trehalose-phosphate phosphatase A, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf07703_208019-212161' '(at5g65140 : 455.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 282.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 910.0) & (original description: Putative TPP6, Description = Probable trehalose-phosphate phosphatase 6, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf10283_215777-219787' '(at4g39770 : 441.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36268 : 277.0) no description available & (gnl|cdd|66079 : 214.0) no description available & (reliability: 882.0) & (original description: Putative TPPB, Description = Trehalose-phosphate phosphatase B, PFAM = PF02358)' T
'3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf10966_332793-337125' '(at5g65140 : 486.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 287.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 972.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00000510ctg006_2183-6521' '(at1g06410 : 1253.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 737.0) no description available & (gnl|cdd|85165 : 595.0) no description available & (reliability: 2506.0) & (original description: Putative TPS, Description = Trehalose-6-phosphate synthase, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00006728ctg001_672-5119' '(at1g23870 : 1345.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose-phosphatase/synthase 9 (TPS9); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphatase synthase S8 (TAIR:AT1G70290.1); Has 4900 Blast hits to 4828 proteins in 1062 species: Archae - 56; Bacteria - 2863; Metazoa - 236; Fungi - 655; Plants - 621; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36268 : 862.0) no description available & (gnl|cdd|85165 : 631.0) no description available & (reliability: 2690.0) & (original description: Putative TPS9, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00007764ctg013_4339-10641' '(at4g17770 : 1390.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.; trehalose phosphatase/synthase 5 (TPS5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase / trehalose-phosphatase family protein (TAIR:AT1G68020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 844.0) no description available & (gnl|cdd|85165 : 620.0) no description available & (reliability: 2780.0) & (original description: Putative TPS5, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5, PFAM = PF02358;PF00982)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00037870ctg007_37564-45389' '(at1g06410 : 1322.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 801.0) no description available & (gnl|cdd|85165 : 595.0) no description available & (reliability: 2644.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF02358;PF00982)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf00463_57748-64098' '(at1g06410 : 1325.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 792.0) no description available & (gnl|cdd|85165 : 584.0) no description available & (reliability: 2650.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf00927_404727-410194' '(at1g68020 : 1467.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.; ATTPS6; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 842.0) no description available & (gnl|cdd|85165 : 619.0) no description available & (reliability: 2934.0) & (original description: Putative TPS6, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf01636_85276-94876' '(at1g06410 : 1324.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 802.0) no description available & (gnl|cdd|85165 : 596.0) no description available & (reliability: 2648.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf05948_800653-809194' '(at1g06410 : 1382.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 821.0) no description available & (gnl|cdd|85165 : 599.0) no description available & (reliability: 2764.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF02358;PF00982)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf06275_20354-25113' '(at2g18700 : 1155.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 779.0) no description available & (gnl|cdd|85165 : 574.0) no description available & (reliability: 2310.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF02358;PF00982)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf06734_5349-10166' '(at1g23870 : 1348.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose-phosphatase/synthase 9 (TPS9); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphatase synthase S8 (TAIR:AT1G70290.1); Has 4900 Blast hits to 4828 proteins in 1062 species: Archae - 56; Bacteria - 2863; Metazoa - 236; Fungi - 655; Plants - 621; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36268 : 860.0) no description available & (gnl|cdd|85165 : 629.0) no description available & (reliability: 2696.0) & (original description: Putative TPS10, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10, PFAM = PF00982;PF02358)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf11123_16158-20982' '(at2g18700 : 1155.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 777.0) no description available & (gnl|cdd|85165 : 577.0) no description available & (reliability: 2310.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF02358;PF00982)' T
'3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf19517_51463-56291' '(at2g18700 : 1196.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 804.0) no description available & (gnl|cdd|85165 : 589.0) no description available & (reliability: 2392.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF00982;PF02358)' T
'3.2.4' 'minor CHO metabolism.trehalose.trehalase' 'niben101scf14394_82840-89433' '(at4g24040 : 630.0) Encodes a trehalase, member of Glycoside Hydrolase Family 37.; trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|85304 : 561.0) no description available & (gnl|cdd|35822 : 513.0) no description available & (reliability: 1260.0) & (original description: Putative treh, Description = Alpha-trehalose glucohydrolase, PFAM = PF01204)' T
'3.2.1001' 'minor CHO metabolism.trehalose' 'trehalose' 'minor CHO metabolism.trehalose' M
'3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf02688_484770-490284' '(at5g51970 : 630.0) Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.; GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35247 : 443.0) no description available & (gnl|cdd|31263 : 252.0) no description available & (p93436|adhx_orysa : 89.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (reliability: 1260.0) & (original description: Putative SDH, Description = Sorbitol dehydrogenase, PFAM = PF08240;PF00107)' T
'3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf04217_1153021-1156189' '(at5g51970 : 379.0) Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.; GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35247 : 327.0) no description available & (gnl|cdd|31263 : 207.0) no description available & (reliability: 758.0) & (original description: Putative gutB, Description = Sorbitol dehydrogenase, PFAM = PF08240;PF00107)' T
'3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf13280_11530-30888' '(at4g30310 : 983.0) FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12264 Blast hits to 12262 proteins in 2271 species: Archae - 128; Bacteria - 9718; Metazoa - 437; Fungi - 335; Plants - 71; Viruses - 0; Other Eukaryotes - 1575 (source: NCBI BLink). & (gnl|cdd|31267 : 547.0) no description available & (gnl|cdd|37728 : 480.0) no description available & (reliability: 1966.0) & (original description: Putative fggy, Description = FGGY carbohydrate kinase domain-containing protein, PFAM = PF00370;PF02782)' T
'3.3.1001' 'minor CHO metabolism.sugar alcohols' 'sorbitol' 'minor CHO metabolism.polyols' M
'3.3.1002' 'minor CHO metabolism.sugar alcohols' 'mannitol' 'minor CHO metabolism.polyols' M
'3.3.1003' 'minor CHO metabolism.sugar alcohols' 'erythritol' 'minor CHO metabolism.polyols' M
'3.3.1004' 'minor CHO metabolism.sugar alcohols' 'maltitol' 'minor CHO metabolism.polyols' M
'3.3.1005' 'minor CHO metabolism.sugar alcohols' 'galactitol' 'minor CHO metabolism.polyols' M
'3.3.1006' 'minor CHO metabolism.sugar alcohols' 'pinitol' 'minor CHO metabolism.polyols' M
'3.3.1007' 'minor CHO metabolism.sugar alcohols' 'ononitol' 'minor CHO metabolism.polyols' M
'3.3.1008' 'minor CHO metabolism.sugar alcohols' 'ribitol' 'minor CHO metabolism.polyols' M
'3.3.1009' 'minor CHO metabolism.sugar alcohols' 'threitol' '' M
'3.3.1010' 'minor CHO metabolism.sugar alcohols' 'sequoyitol' '' M
'3.3.1011' 'minor CHO metabolism.sugar alcohols' 'viburnitol' '' M
'3.3.1012' 'minor CHO metabolism.sugar alcohols' 'quebranchitol' '' M
'3.4' 'minor CHO metabolism.myo-inositol' '' ''
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.3scaffold25664_18025-24855' '(at4g18010 : 598.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1196.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.5scaffold155_541768-548598' '(at4g18010 : 528.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 229.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1056.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 2, PFAM = )' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.5scaffold1588_106573-116395' '(at1g71710 : 502.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1004.0) & (original description: Putative IP5P1, Description = Type I inositol polyphosphate 5-phosphatase 1, PFAM = )' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben044scf00007942ctg018_2672-7085' '(at1g71710 : 273.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (reliability: 546.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 1, PFAM = )' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben044scf00011379ctg000_3529-9919' '(at4g18010 : 595.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1190.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf00526_239745-246608' '(at4g18010 : 584.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 195.0) no description available & (reliability: 1168.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf05490_66476-72295' '(at4g18010 : 581.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 231.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1162.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf08308_113772-117595' '(at1g34120 : 115.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2.; inositol polyphosphate 5-phosphatase I (IP5PI); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 1, PFAM = )' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf14542_101534-108451' '(at4g18010 : 526.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 229.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1052.0) & (original description: Putative BnaAnng12830D, Description = BnaAnng12830D protein, PFAM = )' T
'3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf20077_124130-134752' '(at1g71710 : 577.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (gnl|cdd|35786 : 222.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1154.0) & (original description: Putative IP5P3, Description = Type IV inositol polyphosphate 5-phosphatase 3, PFAM = PF03372)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.3scaffold60155_1-5229' '(at1g22100 : 215.0) Inositol-pentakisphosphate 2-kinase family protein; FUNCTIONS IN: inositol pentakisphosphate 2-kinase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G59312.1); Has 235 Blast hits to 231 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 18; Plants - 92; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|69604 : 200.0) no description available & (gnl|cdd|39946 : 122.0) no description available & (reliability: 424.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.3scaffold60886_1-2964' '(at5g42810 : 242.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 193.0) no description available & (gnl|cdd|39946 : 184.0) no description available & (reliability: 484.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.5scaffold947_432303-439171' '(at5g42810 : 453.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 393.0) no description available & (gnl|cdd|39946 : 300.0) no description available & (reliability: 906.0) & (original description: Putative IPK1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben044scf00016303ctg007_15683-19777' '(at5g42810 : 295.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 249.0) no description available & (gnl|cdd|39946 : 218.0) no description available & (reliability: 590.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben044scf00031655ctg005_814-6398' '(at5g61760 : 368.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 217.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 736.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf02027_274732-277396' '(at5g61760 : 382.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 207.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 764.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf02581_359198-362109' '(at5g61760 : 383.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 212.0) no description available & (gnl|cdd|86433 : 207.0) no description available & (reliability: 766.0) & (original description: Putative IPK2b, Description = Inositol polyphosphate multikinase beta, PFAM = PF03770)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf07579_483496-489083' '(at5g61760 : 367.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 219.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 734.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T
'3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf13523_53539-59439' '(at5g42810 : 454.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 401.0) no description available & (gnl|cdd|39946 : 316.0) no description available & (reliability: 908.0) & (original description: Putative IPK1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T
'3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben044scf00003142ctg008_8953-13720' '(q9lw96|ino1_tobac : 1014.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 957.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 926.0) no description available & (gnl|cdd|87426 : 521.0) no description available & (reliability: 1914.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF01658;PF07994)' T
'3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben101scf02023_148002-154865' '(q9lw96|ino1_tobac : 992.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 947.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 919.0) no description available & (gnl|cdd|87426 : 522.0) no description available & (reliability: 1894.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF07994;PF01658)' T
'3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben101scf06016_883120-888218' '(q9lw96|ino1_tobac : 994.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 939.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 931.0) no description available & (gnl|cdd|87426 : 527.0) no description available & (reliability: 1878.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF01658;PF07994)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.3scaffold26697_22644-27525' '(at2g19800 : 490.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 465.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 434.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 980.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.3scaffold27157_3277-24160' '(at1g14520 : 439.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (q5z8t3|miox_orysa : 433.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 420.0) no description available & (gnl|cdd|36786 : 296.0) no description available & (reliability: 878.0) & (original description: Putative MIOX1, Description = Inositol oxygenase 1, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.5scaffold4672_103928-112579' '(at2g19800 : 466.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 444.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 415.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 932.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf03307_622629-625662' '(at1g14520 : 290.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (q5z8t3|miox_orysa : 283.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 280.0) no description available & (gnl|cdd|36786 : 137.0) no description available & (reliability: 580.0) & (original description: Putative miox, Description = Inositol oxygenase, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf03307_622763-626856' '(at2g19800 : 449.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 425.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 419.0) no description available & (gnl|cdd|36786 : 308.0) no description available & (reliability: 898.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf08230_56907-62698' '(at2g19800 : 484.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 465.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 433.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 968.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T
'3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf30621_3647-8591' '(q5z8t3|miox_orysa : 450.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (at1g14520 : 445.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|68716 : 426.0) no description available & (gnl|cdd|36786 : 295.0) no description available & (reliability: 890.0) & (original description: Putative MIOX1, Description = Inositol oxygenase 1, PFAM = PF05153)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.3scaffold43030_7621-18023' '(at3g02870 : 407.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 400.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 329.0) no description available & (gnl|cdd|30137 : 312.0) no description available & (reliability: 814.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.3scaffold51801_6395-9490' '(at4g39120 : 220.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (gnl|cdd|30139 : 207.0) no description available & (gnl|cdd|38162 : 163.0) no description available & (reliability: 440.0) & (original description: Putative hisN, Description = Histidinol phosphate phosphatase, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold8_1983916-1994901' '(at1g05630 : 1477.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34970 : 143.0) no description available & (gnl|cdd|35786 : 125.0) no description available & (reliability: 2954.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold2641_244652-263053' '(at1g31190 : 468.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 262.0) no description available & (gnl|cdd|38162 : 189.0) no description available & (o49071|impp_mescr : 128.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 936.0) & (original description: Putative hisN, Description = Histidinol-phosphate phosphatase, putative, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold3981_174729-183495' '(at1g31190 : 462.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 257.0) no description available & (gnl|cdd|38162 : 183.0) no description available & (o49071|impp_mescr : 124.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 924.0) & (original description: Putative hisN, Description = Histidinol-phosphate phosphatase, putative, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold4842_158819-172127' '(at1g65580 : 1357.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 236.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 2494.0) & (original description: Putative IP5P15, Description = Type II inositol polyphosphate 5-phosphatase 15, PFAM = PF03372)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben044scf00023067ctg000_1-9476' '(at1g05630 : 1413.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 127.0) no description available & (gnl|cdd|47467 : 126.0) no description available & (reliability: 2826.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf00303_22447-29852' '(at3g02870 : 412.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 405.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 332.0) no description available & (gnl|cdd|30137 : 316.0) no description available & (reliability: 824.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf02174_371532-381190' '(at1g31190 : 506.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 268.0) no description available & (gnl|cdd|38162 : 190.0) no description available & (o49071|impp_mescr : 132.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1012.0) & (original description: Putative IMPL1, Description = Phosphatase IMPL1, chloroplastic, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf02190_430006-440192' '(at2g43900 : 1488.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 221.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 2862.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf03321_415233-425280' '(at2g43900 : 1501.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 228.0) no description available & (gnl|cdd|47467 : 214.0) no description available & (reliability: 2906.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf03867_276385-290273' '(at1g31190 : 516.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 271.0) no description available & (gnl|cdd|38162 : 194.0) no description available & (o49071|impp_mescr : 135.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1032.0) & (original description: Putative IMPL1, Description = Phosphatase IMPL1, chloroplastic, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf04861_1-10750' '(at4g39120 : 460.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (gnl|cdd|30139 : 332.0) no description available & (gnl|cdd|38162 : 257.0) no description available & (o49071|impp_mescr : 95.1) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 920.0) & (original description: Putative HISN7, Description = Bifunctional phosphatase IMPL2, chloroplastic, PFAM = PF00459)' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf05040_22046-40861' '(at1g05630 : 616.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative D50, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase, PFAM = )' T
'3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf23998_124384-133920' '(at2g43900 : 1401.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 221.0) no description available & (reliability: 2710.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T
'3.4.1001' 'minor CHO metabolism.myo-inositol' 'inositol' 'minor CHO metabolism.inositol' M
'3.4.1002' 'minor CHO metabolism.myo-inositol' 'inositol-1-p' 'minor CHO metabolism.inositol' M
'3.4.1003' 'minor CHO metabolism.myo-inositol' 'triphosphoinositide' 'minor CHO metabolism.inositol' M
'3.4.1004' 'minor CHO metabolism.myo-inositol' 'inositol-2-p' 'minor CHO metabolism.inositol' M
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold13385_14609-25490' '(at4g28706 : 458.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 270.0) no description available & (gnl|cdd|38158 : 93.1) no description available & (reliability: 916.0) & (original description: Putative COCSUDRAFT_17448, Description = PfkB-type carbohydrate kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold13576_589-5164' '(at1g17160 : 466.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink). & (gnl|cdd|29358 : 301.0) no description available & (gnl|cdd|38066 : 250.0) no description available & (reliability: 932.0) & (original description: Putative rbsK, Description = Ribokinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold16405_7216-11018' '(at3g47800 : 475.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 412.0) no description available & (gnl|cdd|83683 : 275.0) no description available & (reliability: 950.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold18585_1-4876' '(at5g14500 : 476.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36807 : 435.0) no description available & (gnl|cdd|31020 : 172.0) no description available & (reliability: 952.0) & (original description: Putative RCOM_1064700, Description = Aldose 1-epimerase, putative, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold20833_1873-13742' '(at5g11980 : 834.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 534.0) no description available & (gnl|cdd|67729 : 372.0) no description available & (reliability: 1668.0) & (original description: Putative COG8, Description = Component of oligomeric golgi complex 8, PFAM = PF04124)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold34873_20458-26191' '(at4g27600 : 248.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38065 : 145.0) no description available & (gnl|cdd|29352 : 126.0) no description available & (reliability: 496.0) & (original description: Putative NARA5, Description = Putative sugar kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold48836_3178-13388' '(at5g19150 : 452.0) pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39177 : 312.0) no description available & (gnl|cdd|29355 : 216.0) no description available & (reliability: 904.0) & (original description: Putative naxd, Description = ATP-dependent (S)-NAD(P)H-hydrate dehydratase, PFAM = PF01256)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold69123_4833-9511' '(at3g61610 : 492.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 445.0) no description available & (gnl|cdd|31020 : 180.0) no description available & (reliability: 984.0) & (original description: Putative Sb03g030040, Description = Putative uncharacterized protein Sb03g030040, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold121_429227-436715' '(at1g06690 : 576.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 254.0) no description available & (gnl|cdd|31011 : 220.0) no description available & (p40691|a115_tobac : 82.8) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1152.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold207_516836-523399' '(at1g19600 : 443.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|29352 : 257.0) no description available & (gnl|cdd|38065 : 227.0) no description available & (reliability: 886.0) & (original description: Putative 7H8, Description = Putative ribokinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold1841_71908-92523' '(at1g48430 : 748.0) Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT3G17770.1); Has 5033 Blast hits to 5026 proteins in 1105 species: Archae - 14; Bacteria - 4080; Metazoa - 97; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|37637 : 598.0) no description available & (gnl|cdd|86078 : 372.0) no description available & (o49227|dhbk_soybn : 84.7) Putative 3,4-dihydroxy-2-butanone kinase (EC 2.7.1.-) (Fragment) - Glycine max (Soybean) & (reliability: 1496.0) & (original description: Putative DHBK, Description = Putative 3,4-dihydroxy-2-butanone kinase, PFAM = PF02734;PF02733)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold3085_136290-143843' '(at4g28706 : 438.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 252.0) no description available & (gnl|cdd|38066 : 81.9) no description available & (reliability: 876.0) & (original description: Putative At5g43910, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold3896_61517-165064' '(at1g55120 : 121.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 112.0) no description available & (q56ud1|inv5_orysa : 107.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 242.0) & (original description: Putative aleh2, Description = Cell wall invertase, PFAM = PF08244)' T
'3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold9160_18879-24463' '(at5g58730 : 362.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 138.0) no description available & (gnl|cdd|30870 : 88.7) no description available & (reliability: 724.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00001298ctg006_9642-14962' '(at2g27680 : 585.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (gnl|cdd|36788 : 249.0) no description available & (gnl|cdd|84642 : 166.0) no description available & (reliability: 1170.0) & (original description: Putative RSP5, Description = Flagellar radial spoke protein 5, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00012575ctg007_1805-13781' '(at1g04420 : 395.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 223.0) no description available & (gnl|cdd|36788 : 174.0) no description available & (reliability: 790.0) & (original description: Putative tas, Description = Protein tas, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00020661ctg004_2186-8760' '(at1g04420 : 294.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 151.0) no description available & (gnl|cdd|36788 : 141.0) no description available & (reliability: 588.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00025049ctg001_2230-5266' '(at1g55120 : 225.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 207.0) no description available & (q56ud1|inv5_orysa : 197.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative lin5, Description = Cell wall invertase, PFAM = PF08244)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00026042ctg006_408-2960' '(at5g57330 : 201.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 188.0) no description available & (gnl|cdd|85346 : 86.2) no description available & (reliability: 402.0) & (original description: Putative BnaC08g14350D, Description = BnaC08g14350D protein, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00029281ctg000_3254-11004' '(at1g06690 : 581.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 253.0) no description available & (gnl|cdd|31011 : 216.0) no description available & (p40691|a115_tobac : 85.1) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1162.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00030754ctg009_13643-19539' '(at4g23730 : 441.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 440.0) no description available & (gnl|cdd|31020 : 193.0) no description available & (reliability: 882.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben044scf00038439ctg003_5784-11476' '(at5g58730 : 387.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 132.0) no description available & (gnl|cdd|30870 : 84.1) no description available & (reliability: 774.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00305_425378-441818' '(at5g66530 : 442.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1). & (gnl|cdd|36807 : 306.0) no description available & (gnl|cdd|31020 : 138.0) no description available & (reliability: 884.0) & (original description: Putative BnaA07g12540D, Description = BnaA07g12540D protein, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00466_348308-352975' '(at2g21250 : 544.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 458.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|36790 : 366.0) no description available & (gnl|cdd|84642 : 319.0) no description available & (reliability: 1088.0) & (original description: Putative m6pr, Description = NADPH-dependent mannose 6-phosphate reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00470_610857-616920' '(at3g61610 : 419.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 404.0) no description available & (gnl|cdd|31020 : 168.0) no description available & (reliability: 838.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00573_602387-606361' '(at5g58730 : 345.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 137.0) no description available & (gnl|cdd|84674 : 86.2) no description available & (reliability: 690.0) & (original description: Putative MIK, Description = Myo-inositol kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00586_42581-54795' '(at2g37790 : 512.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink). & (gnl|cdd|36790 : 391.0) no description available & (gnl|cdd|84642 : 313.0) no description available & (q7g764|nado1_orysa : 253.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 1024.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00594_527285-534736' '(at5g19150 : 415.0) pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39177 : 288.0) no description available & (gnl|cdd|29355 : 204.0) no description available & (reliability: 830.0) & (original description: Putative naxd, Description = ATP-dependent (S)-NAD(P)H-hydrate dehydratase, PFAM = PF01256)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00698_168981-201893' '(at1g06690 : 578.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 255.0) no description available & (gnl|cdd|31011 : 219.0) no description available & (p40691|a115_tobac : 84.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1156.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf00721_83499-89061' '(at4g23730 : 460.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 454.0) no description available & (gnl|cdd|31020 : 203.0) no description available & (reliability: 920.0) & (original description: Putative BnaA03g46210D, Description = BnaA03g46210D protein, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01050_67008-85282' '(at5g57330 : 502.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 470.0) no description available & (gnl|cdd|31020 : 194.0) no description available & (reliability: 1004.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01063_72080-160345' '(at4g27600 : 558.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29352 : 284.0) no description available & (gnl|cdd|38065 : 273.0) no description available & (reliability: 1116.0) & (original description: Putative NARA5, Description = AT4g27600/T29A15_90, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01083_679582-697239' '(at3g61610 : 411.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 394.0) no description available & (gnl|cdd|31020 : 162.0) no description available & (reliability: 822.0) & (original description: Putative PGSC0003DMG400000089, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01326_801160-830438' '(gnl|cdd|36817 : 378.0) no description available & (at3g47800 : 360.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|85346 : 259.0) no description available & (reliability: 720.0) & (original description: Putative ncapp, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01326_834269-842142' '(at5g15140 : 373.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink). & (gnl|cdd|36817 : 370.0) no description available & (gnl|cdd|85346 : 249.0) no description available & (reliability: 746.0) & (original description: Putative aep1, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01326_843470-847260' '(gnl|cdd|36817 : 384.0) no description available & (at5g15140 : 379.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink). & (gnl|cdd|85346 : 259.0) no description available & (reliability: 758.0) & (original description: Putative aep1, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01500_673991-681544' '(at4g28706 : 437.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 248.0) no description available & (gnl|cdd|38066 : 81.9) no description available & (reliability: 874.0) & (original description: Putative At4g28706, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01694_281390-288700' '(at5g58730 : 387.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 136.0) no description available & (gnl|cdd|30870 : 87.2) no description available & (reliability: 774.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01817_212172-218800' '(at4g23730 : 432.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 431.0) no description available & (gnl|cdd|31020 : 195.0) no description available & (reliability: 864.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01953_142942-149620' '(at5g53580 : 567.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (gnl|cdd|36788 : 262.0) no description available & (gnl|cdd|31011 : 216.0) no description available & (reliability: 1134.0) & (original description: Putative PLR1, Description = Pyridoxal reductase, chloroplastic, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01986_40940-49103' '(at5g11980 : 342.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 244.0) no description available & (gnl|cdd|67729 : 235.0) no description available & (reliability: 684.0) & (original description: Putative cog8, Description = Conserved oligomeric Golgi complex subunit 8, PFAM = PF04124)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf01986_41319-49109' '(at5g11980 : 862.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 543.0) no description available & (gnl|cdd|67729 : 378.0) no description available & (reliability: 1724.0) & (original description: Putative COG8, Description = Component of oligomeric golgi complex 8, PFAM = PF04124)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf02078_872250-878620' '(at3g13790 : 602.0) Encodes a protein with invertase activity.; ATBFRUCT1; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1). & (gnl|cdd|35449 : 597.0) no description available & (p26792|inv1_dauca : 540.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (gnl|cdd|47917 : 374.0) no description available & (reliability: 1166.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF00251;PF08244)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf02085_770727-776806' '(at2g37770 : 429.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36790 : 379.0) no description available & (gnl|cdd|84642 : 309.0) no description available & (p23901|aldr_horvu : 217.0) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (reliability: 858.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf02430_180359-187136' '(at5g01670 : 467.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 16960 Blast hits to 16922 proteins in 2239 species: Archae - 315; Bacteria - 10569; Metazoa - 1835; Fungi - 1554; Plants - 1108; Viruses - 0; Other Eukaryotes - 1579 (source: NCBI BLink). & (p23901|aldr_horvu : 459.0) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (gnl|cdd|36790 : 314.0) no description available & (gnl|cdd|84642 : 271.0) no description available & (reliability: 934.0) & (original description: Putative alrA, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf02459_960350-962734' '(at1g55120 : 110.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (q56ud1|inv5_orysa : 94.4) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (gnl|cdd|35449 : 93.5) no description available & (reliability: 220.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf02502_1968952-1981182' '(at5g03770 : 512.0) Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase; KDO transferase A (KDTA); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal (InterPro:IPR007507); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81724 : 326.0) no description available & (reliability: 1024.0) & (original description: Putative KDTA, Description = Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial, PFAM = PF04413)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03045_1349903-1354926' '(gnl|cdd|36807 : 369.0) no description available & (at5g14500 : 353.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31020 : 138.0) no description available & (reliability: 706.0) & (original description: Putative Ccrd_015971, Description = Aldose 1-/Glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03064_306395-345440' '(at1g04420 : 598.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 306.0) no description available & (gnl|cdd|36788 : 267.0) no description available & (q40648|kcab_orysa : 115.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1196.0) & (original description: Putative tas, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03194_23190-26992' '(at3g47800 : 474.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 410.0) no description available & (gnl|cdd|83683 : 274.0) no description available & (reliability: 948.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03263_698234-708959' '(at4g28706 : 505.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 267.0) no description available & (gnl|cdd|38158 : 88.8) no description available & (reliability: 1010.0) & (original description: Putative At4g28706, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03326_296580-509750' '(at4g27600 : 558.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29352 : 283.0) no description available & (gnl|cdd|38065 : 271.0) no description available & (reliability: 1116.0) & (original description: Putative NARA5, Description = AT4g27600/T29A15_90, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03766_945680-951943' '(at5g14500 : 479.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36807 : 435.0) no description available & (gnl|cdd|31020 : 173.0) no description available & (reliability: 958.0) & (original description: Putative glysoja_041637, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf03948_107584-115679' '(at1g06730 : 530.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 14630 Blast hits to 14623 proteins in 2218 species: Archae - 286; Bacteria - 12051; Metazoa - 104; Fungi - 33; Plants - 346; Viruses - 0; Other Eukaryotes - 1810 (source: NCBI BLink). & (gnl|cdd|38066 : 185.0) no description available & (gnl|cdd|30870 : 138.0) no description available & (reliability: 1060.0) & (original description: Putative At1g06730, Description = At1g06730/F4H5_22, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf04096_455011-457616' '(at5g52190 : 240.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar isomerase (SIS) (InterPro:IPR001347); Has 950 Blast hits to 950 proteins in 353 species: Archae - 153; Bacteria - 734; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|31137 : 98.4) no description available & (reliability: 480.0) & (original description: Putative hxlB, Description = 6-phospho-3-hexuloisomerase HxlB, PFAM = )' T
'3.5' 'minor CHO metabolism.others' 'niben101scf04172_486945-503527' '(at4g28706 : 501.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 260.0) no description available & (gnl|cdd|38158 : 83.1) no description available & (reliability: 1002.0) & (original description: Putative glysoja_026483, Description = Ribokinase, PFAM = PF00294;PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf04741_390375-394929' '(at1g17160 : 462.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink). & (gnl|cdd|29358 : 299.0) no description available & (gnl|cdd|38066 : 249.0) no description available & (reliability: 924.0) & (original description: Putative RBSK, Description = Ribokinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf04989_245493-255994' '(at5g53850 : 788.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37842 : 306.0) no description available & (gnl|cdd|33954 : 213.0) no description available & (reliability: 1576.0) & (original description: Putative apip, Description = MTRu-1-P dehydratase, PFAM = PF00596)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf05645_333934-340481' '(at5g62420 : 428.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 21460 Blast hits to 21432 proteins in 2382 species: Archae - 393; Bacteria - 14564; Metazoa - 1753; Fungi - 1710; Plants - 1348; Viruses - 0; Other Eukaryotes - 1692 (source: NCBI BLink). & (gnl|cdd|36790 : 325.0) no description available & (gnl|cdd|84642 : 288.0) no description available & (q7g764|nado1_orysa : 263.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: Putative AKR4C9, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf05736_158496-173404' '(at4g28706 : 481.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 267.0) no description available & (gnl|cdd|38158 : 89.6) no description available & (reliability: 962.0) & (original description: Putative glysoja_016503, Description = Ribokinase, PFAM = PF00294;PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf06171_234385-239854' '(at1g19600 : 491.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|29352 : 259.0) no description available & (gnl|cdd|38065 : 230.0) no description available & (reliability: 982.0) & (original description: Putative 7H8, Description = Putative ribokinase, PFAM = PF00294)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf06172_230761-286551' '(at3g47800 : 338.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 334.0) no description available & (gnl|cdd|83683 : 247.0) no description available & (reliability: 676.0) & (original description: Putative ncapp, Description = Aldose 1-epimerase, PFAM = PF01263;PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf07247_517035-529695' '(at5g53850 : 768.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37842 : 313.0) no description available & (gnl|cdd|33954 : 215.0) no description available & (reliability: 1536.0) & (original description: Putative apip, Description = MTRu-1-P dehydratase, PFAM = PF00596)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf07663_44555-47160' '(at5g52190 : 243.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar isomerase (SIS) (InterPro:IPR001347); Has 950 Blast hits to 950 proteins in 353 species: Archae - 153; Bacteria - 734; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|31137 : 98.8) no description available & (reliability: 486.0) & (original description: Putative rmpB, Description = 3-hexulose-6-phosphate isomerase, PFAM = )' T
'3.5' 'minor CHO metabolism.others' 'niben101scf08643_18186-24377' '(at2g27680 : 611.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (gnl|cdd|36788 : 241.0) no description available & (gnl|cdd|84642 : 159.0) no description available & (reliability: 1222.0) & (original description: Putative DKGA, Description = 2,5-diketo-D-gluconic acid reductase A, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf08653_820167-824243' '(at3g17940 : 493.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|36817 : 415.0) no description available & (gnl|cdd|83683 : 267.0) no description available & (reliability: 986.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf08675_150541-154276' '(at3g17940 : 503.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|36817 : 415.0) no description available & (gnl|cdd|85346 : 264.0) no description available & (reliability: 1006.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf10202_16751-21863' '(at3g61610 : 492.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 445.0) no description available & (gnl|cdd|31020 : 181.0) no description available & (reliability: 984.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf10722_57175-65471' '(gnl|cdd|83360 : 289.0) no description available & (at1g04420 : 286.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|36788 : 229.0) no description available & (q40648|kcab_orysa : 120.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: Putative tas, Description = Aldo/keto reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf10919_108465-112894' '(at2g21250 : 539.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 454.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|36790 : 361.0) no description available & (gnl|cdd|84642 : 316.0) no description available & (reliability: 1078.0) & (original description: Putative m6pr, Description = NADPH-dependent mannose 6-phosphate reductase, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf16024_76866-86315' '(at5g57330 : 505.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 472.0) no description available & (gnl|cdd|31020 : 197.0) no description available & (reliability: 1010.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf18745_157417-172038' '(at5g37850 : 509.0) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.; SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749). & (gnl|cdd|37810 : 392.0) no description available & (gnl|cdd|29357 : 288.0) no description available & (reliability: 1018.0) & (original description: Putative PK, Description = Pyridoxal kinase, PFAM = PF08543)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf20773_194513-198975' '(at5g62420 : 426.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 21460 Blast hits to 21432 proteins in 2382 species: Archae - 393; Bacteria - 14564; Metazoa - 1753; Fungi - 1710; Plants - 1348; Viruses - 0; Other Eukaryotes - 1692 (source: NCBI BLink). & (gnl|cdd|36790 : 322.0) no description available & (gnl|cdd|84642 : 286.0) no description available & (q7g764|nado1_orysa : 274.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'3.5' 'minor CHO metabolism.others' 'niben101scf21257_58135-66091' '(at1g49350 : 285.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); Has 2896 Blast hits to 2893 proteins in 1061 species: Archae - 1; Bacteria - 2475; Metazoa - 103; Fungi - 59; Plants - 64; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|29363 : 190.0) no description available & (gnl|cdd|38219 : 94.3) no description available & (reliability: 570.0) & (original description: Putative At1g49350, Description = PfkB-type carbohydrate kinase-like protein, PFAM = PF00294;PF00294)' T
'3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'nbv0.3scaffold13986_706-7346' '(at5g57655 : 774.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 760.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 657.0) no description available & (reliability: 1548.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T
'3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'nbv0.5scaffold6244_75193-81602' '(at5g57655 : 711.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 698.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 602.0) no description available & (reliability: 1422.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T
'3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'niben101scf01907_85269-92519' '(at5g57655 : 776.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 765.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 657.0) no description available & (reliability: 1552.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold16565_1-37535' '(at2g36850 : 2431.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1442.0) no description available & (gnl|cdd|66084 : 642.0) no description available & (reliability: 4862.0) & (original description: Putative BnaC05g44800D, Description = BnaC05g44800D protein, PFAM = PF02364;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold23408_1-18677' '(at3g07160 : 1353.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 1154.0) no description available & (gnl|cdd|66084 : 578.0) no description available & (reliability: 2706.0) & (original description: Putative BnaUnng02530D, Description = BnaUnng02530D protein, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold49869_203-15227' '(at3g07160 : 665.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 261.0) no description available & (reliability: 1330.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold70777_1-6443' '(at5g13000 : 1112.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 932.0) no description available & (gnl|cdd|66084 : 494.0) no description available & (reliability: 2224.0) & (original description: Putative GSL2, Description = Callose synthase 5, PFAM = PF02364;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold74534_1-7606' '(at3g07160 : 598.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 295.0) no description available & (gnl|cdd|66084 : 85.7) no description available & (reliability: 1196.0) & (original description: Putative CALS, Description = Callose synthase, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold76570_1-5277' '(at2g36850 : 263.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = )' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold140812_1-1289' '(at4g03550 : 214.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 120.0) no description available & (reliability: 428.0) & (original description: Putative GSL1, Description = Callose synthase 12, PFAM = )' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold130_879953-906978' '(at5g13000 : 3159.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 2030.0) no description available & (gnl|cdd|66084 : 405.0) no description available & (reliability: 6318.0) & (original description: Putative Sb04g038510, Description = Putative uncharacterized protein Sb04g038510, PFAM = PF02364;PF02364;PF04652;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold130_985551-988193' '(at3g07160 : 177.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 115.0) no description available & (reliability: 354.0) & (original description: Putative cs, Description = Callose synthase 9, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold1281_161439-189826' '(at1g05570 : 3130.0) Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.; callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2). & (gnl|cdd|36134 : 2129.0) no description available & (gnl|cdd|66084 : 663.0) no description available & (reliability: 6260.0) & (original description: Putative CALS1, Description = Callose synthase 1, PFAM = PF02364;PF02364;PF04652;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00002518ctg002_1-10058' '(at3g07160 : 778.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 755.0) no description available & (gnl|cdd|66084 : 484.0) no description available & (reliability: 1556.0) & (original description: Putative CFL1, Description = Callose synthase 5, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00005931ctg006_7784-21001' '(at2g36850 : 1133.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1023.0) no description available & (gnl|cdd|66084 : 515.0) no description available & (reliability: 2266.0) & (original description: Putative BnaUnng02530D, Description = BnaUnng02530D protein, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00005931ctg007_1-12883' '(at2g36850 : 638.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 304.0) no description available & (gnl|cdd|66084 : 95.4) no description available & (reliability: 1276.0) & (original description: Putative CALS, Description = Callose synthase, PFAM = PF02364;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00012880ctg003_1628-7484' '(at3g07160 : 233.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 80.4) no description available & (reliability: 466.0) & (original description: Putative CFL1, Description = Callose synthase 9, PFAM = )' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00012880ctg005_1-15246' '(at5g13000 : 2824.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1892.0) no description available & (gnl|cdd|66084 : 651.0) no description available & (reliability: 5648.0) & (original description: Putative CALS3, Description = Callose synthase 3, PFAM = PF14288;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00013988ctg005_1-14455' '(at2g36850 : 348.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = )' T
'3.6' 'minor CHO metabolism.callose' 'niben044scf00019844ctg012_6233-13648' '(at3g07160 : 704.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 608.0) no description available & (gnl|cdd|66084 : 305.0) no description available & (reliability: 1408.0) & (original description: Putative CFL1, Description = 1,3-beta-glucan synthase, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf02725_264045-290401' '(at3g14570 : 2745.0) encodes a protein similar to callose synthase; glucan synthase-like 4 (GSL04); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1). & (gnl|cdd|36134 : 1497.0) no description available & (gnl|cdd|66084 : 637.0) no description available & (reliability: 5490.0) & (original description: Putative CALS8, Description = Putative callose synthase 8, PFAM = PF02364;PF04652;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf02853_111307-178466' '(at2g36850 : 3070.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1742.0) no description available & (gnl|cdd|66084 : 666.0) no description available & (reliability: 6140.0) & (original description: Putative CALS10, Description = Callose synthase 10, PFAM = PF14288;PF02364;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf04144_187604-211988' '(at1g06490 : 2803.0) encodes a gene similar to callose synthase; glucan synthase-like 7 (GSL07); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1279 Blast hits to 924 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 711; Plants - 489; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36134 : 1984.0) no description available & (gnl|cdd|66084 : 664.0) no description available & (reliability: 5606.0) & (original description: Putative CALS7, Description = Callose synthase 7, PFAM = PF04652;PF14288;PF02364;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf05107_131254-198229' '(at3g07160 : 2825.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 1756.0) no description available & (gnl|cdd|66084 : 667.0) no description available & (reliability: 5650.0) & (original description: Putative CALS9, Description = Callose synthase 9, PFAM = PF14288;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf05107_132087-142654' '(at3g07160 : 681.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 613.0) no description available & (gnl|cdd|66084 : 307.0) no description available & (reliability: 1362.0) & (original description: Putative CalS13, Description = Callose synthase, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf05107_248848-268238' '(at5g13000 : 1850.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1502.0) no description available & (gnl|cdd|66084 : 646.0) no description available & (reliability: 3700.0) & (original description: Putative Sb10g005550, Description = Putative uncharacterized protein Sb10g005550, PFAM = PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf05107_271862-400193' '(at5g13000 : 591.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 346.0) no description available & (reliability: 1182.0) & (original description: Putative GSL2, Description = Callose synthase 5, PFAM = PF14288;PF04652)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf06208_53714-61181' '(at4g03550 : 2609.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1739.0) no description available & (gnl|cdd|66084 : 867.0) no description available & (reliability: 5218.0) & (original description: Putative CALS12, Description = Callose synthase 12, PFAM = PF02364;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf08446_317367-324676' '(at4g04970 : 2399.0) encodes a gene similar to callose synthase; glucan synthase-like 1 (GSL1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: reproduction, 1,3-beta-glucan biosynthetic process, pollen development; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 5 (TAIR:AT4G03550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36134 : 1712.0) no description available & (gnl|cdd|66084 : 804.0) no description available & (reliability: 4798.0) & (original description: Putative CALS11, Description = Callose synthase 11, PFAM = PF02364;PF14288)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf09955_72580-91144' '(at2g13680 : 3164.0) Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.; callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36134 : 2016.0) no description available & (gnl|cdd|66084 : 683.0) no description available & (reliability: 6328.0) & (original description: Putative CALS5, Description = Callose synthase 5, PFAM = PF04652;PF14288;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf11608_181859-206875' '(at5g13000 : 3173.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 2038.0) no description available & (gnl|cdd|66084 : 405.0) no description available & (reliability: 6346.0) & (original description: Putative CALS3, Description = Callose synthase 3, PFAM = PF14288;PF04652;PF02364;PF02364)' T
'3.6' 'minor CHO metabolism.callose' 'niben101scf11922_44555-76946' '(at1g05570 : 3139.0) Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.; callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2). & (gnl|cdd|36134 : 2152.0) no description available & (gnl|cdd|66084 : 665.0) no description available & (reliability: 6278.0) & (original description: Putative CALS1, Description = Callose synthase 1, PFAM = PF14288;PF02364;PF04652)' T
'3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf02564_1241581-1248521' '(at5g49650 : 838.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37742 : 717.0) no description available & (gnl|cdd|31268 : 206.0) no description available & (reliability: 1676.0) & (original description: Putative XYLB, Description = Xylulose kinase, PFAM = PF02782;PF00370)' T
'3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf02564_1438875-1445419' '(at5g49650 : 857.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37742 : 694.0) no description available & (gnl|cdd|31268 : 199.0) no description available & (reliability: 1714.0) & (original description: Putative Xylb, Description = Xylulose kinase, PFAM = PF00370;PF02782)' T
'3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf12293_365416-371634' '(at2g21370 : 635.0) Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.; xylulose kinase-1 (XK-1); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast, plastid, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31268 : 217.0) no description available & (reliability: 1270.0) & (original description: Putative xylB, Description = Xylulose kinase, PFAM = PF02782;PF00370)' T
'3.8' 'minor CHO metabolism.galactose' '' ''
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'nbv0.5scaffold52_112317-142131' '(at4g16130 : 1406.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 381.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2706.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF10509;PF13528;PF00288)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'nbv0.5scaffold82_15511-617401' '(at4g16130 : 457.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben044scf00023719ctg001_17798-25532' '(at4g16130 : 374.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 130.0) no description available & (reliability: 696.0) & (original description: Putative ARA, Description = L-arabinokinase, PFAM = PF13528)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben044scf00043991ctg000_166-5723' '(at4g16130 : 620.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|30502 : 116.0) no description available & (reliability: 1196.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544;PF00288)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf03070_784193-792468' '(at3g06580 : 758.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (gnl|cdd|35850 : 441.0) no description available & (gnl|cdd|30502 : 255.0) no description available & (reliability: 1516.0) & (original description: Putative GAL1, Description = Galactokinase, PFAM = PF08544;PF10509;PF00288)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf03540_33750-66975' '(at4g16130 : 1434.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 383.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2758.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509)' T
'3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf09703_41484-50883' '(at3g06580 : 767.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (gnl|cdd|35850 : 439.0) no description available & (gnl|cdd|30502 : 259.0) no description available & (reliability: 1534.0) & (original description: Putative GAL1, Description = Galactokinase, PFAM = PF08544;PF00288;PF10509)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'nbv0.3scaffold41435_3067-7433' '(at5g08380 : 320.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37577 : 246.0) no description available & (q9fxt4|agal_orysa : 244.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 640.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben044scf00003269ctg005_3656-9177' '(at5g08380 : 358.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q9fxt4|agal_orysa : 286.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 278.0) no description available & (gnl|cdd|65817 : 89.2) no description available & (reliability: 716.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf00338_861720-869426' '(at5g08370 : 573.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9fxt4|agal_orysa : 548.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 470.0) no description available & (gnl|cdd|65817 : 108.0) no description available & (reliability: 1146.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499;PF17450)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf02913_141599-154280' '(at5g08380 : 605.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q9fxt4|agal_orysa : 473.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 460.0) no description available & (gnl|cdd|65817 : 89.6) no description available & (reliability: 1210.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf06825_326845-336526' '(at5g08370 : 573.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9fxt4|agal_orysa : 547.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 469.0) no description available & (gnl|cdd|65817 : 106.0) no description available & (reliability: 1146.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499;PF17450)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf07590_766535-776008' '(at3g26380 : 729.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Melibiase family protein (TAIR:AT3G56310.1); Has 1323 Blast hits to 1316 proteins in 313 species: Archae - 2; Bacteria - 513; Metazoa - 306; Fungi - 224; Plants - 205; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37577 : 183.0) no description available & (reliability: 1458.0) & (original description: Putative At3g26380, Description = Alpha-galactosidase, PFAM = PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09101_259155-266741' '(at3g56310 : 656.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37577 : 487.0) no description available & (q9fxt4|agal_orysa : 478.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 100.0) no description available & (reliability: 1312.0) & (original description: Putative AGAL3, Description = Alpha-galactosidase 3, PFAM = PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09101_263535-266678' '(at3g56310 : 117.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fxt4|agal_orysa : 85.5) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09401_46050-56822' '(at3g56310 : 652.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37577 : 488.0) no description available & (q9fxt4|agal_orysa : 480.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 101.0) no description available & (reliability: 1304.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499)' T
'3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf12011_158062-166255' '(at5g08380 : 651.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37577 : 492.0) no description available & (q9fxt4|agal_orysa : 488.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 98.8) no description available & (reliability: 1302.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T
'3.8.3' 'minor CHO metabolism.galactose.galactose-1-phosphate uridyl transferases' '' ''
'3.99' 'minor CHO metabolism.misc' 'niben044scf00001361ctg005_36749-45221' '(at5g36700 : 401.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 334.0) no description available & (gnl|cdd|30992 : 204.0) no description available & (reliability: 802.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13242;PF13344)' T
'3.99' 'minor CHO metabolism.misc' 'niben101scf08947_105531-117042' '(at5g36700 : 493.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 391.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 986.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13344;PF13242)' T
'3.99' 'minor CHO metabolism.misc' 'niben101scf11126_855389-863617' '(at5g36700 : 489.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 392.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 978.0) & (original description: Putative PGP, Description = Phosphoglycolate phosphatase, PFAM = PF13242;PF13344)' T
'3.99.1001' 'minor CHO metabolism.misc' '1-o-methyl-alpha-galactoside' 'minor CHO metabolism.misc' M
'3.99.1002' 'minor CHO metabolism.misc' '1-o-methyl-beta-galactoside' 'minor CHO metabolism.misc' M
'3.99.1003' 'minor CHO metabolism.misc' '2-deoxyglucose' 'minor CHO metabolism.misc' M
'3.99.1004' 'minor CHO metabolism.misc' '3-deoxyglucose' 'minor CHO metabolism.misc' M
'3.99.1005' 'minor CHO metabolism.misc' '3-o-methylglucose' 'minor CHO metabolism.misc' M
'3.99.1006' 'minor CHO metabolism.misc' 'beta-gentiobiose' 'minor CHO metabolism.misc' M
'3.99.1007' 'minor CHO metabolism.misc' 'erythrose' 'minor CHO metabolism.misc' M
'3.99.1008' 'minor CHO metabolism.misc' 'lactose' 'minor CHO metabolism.misc' M
'3.99.1009' 'minor CHO metabolism.misc' 'lyxose' 'minor CHO metabolism.misc' M
'3.99.1010' 'minor CHO metabolism.misc' 'melezitose' 'minor CHO metabolism.misc' M
'3.99.1011' 'minor CHO metabolism.misc' 'methyl-alpha-mannopyranoside' 'minor CHO metabolism.misc' M
'3.99.1012' 'minor CHO metabolism.misc' 'methyl-d-glucoside' 'minor CHO metabolism.misc' M
'3.99.1013' 'minor CHO metabolism.misc' 'oligofructan (total)' 'minor CHO metabolism.misc' M
'3.99.1014' 'minor CHO metabolism.misc' 'psicose' 'minor CHO metabolism.misc' M
'3.99.1015' 'minor CHO metabolism.misc' 'sophorose' 'minor CHO metabolism.misc' M
'3.99.1016' 'minor CHO metabolism.misc' 'sorbitol-6-p' 'minor CHO metabolism.misc' M
'3.99.1017' 'minor CHO metabolism.misc' 'tagatose' 'minor CHO metabolism.misc' M
'3.99.1018' 'minor CHO metabolism.misc' 'xylitol' 'minor CHO metabolism.misc' M
'3.99.1019' 'minor CHO metabolism.misc' 'xylose' 'minor CHO metabolism.misc' M
'3.99.1020' 'minor CHO metabolism.misc' 'galactonate' 'minor CHO metabolism.misc; galactose metabolism' M
'3.99.1021' 'minor CHO metabolism.misc' 'galactose' 'minor CHO metabolism.misc; galactose metabolism; cell wall degradation' M
'3.99.1022' 'minor CHO metabolism.misc' 'galactose-6-p' 'minor CHO metabolism.misc; galactose metabolism' M
'3.99.1023' 'minor CHO metabolism.misc' 'stachyose' 'minor CHO metabolism.misc; galactose metabolism' M
'3.99.1024' 'minor CHO metabolism.misc' 'erythronic acid' '' M
'3.99.1025' 'minor CHO metabolism.misc' 'gulose' '' M
'3.99.1026' 'minor CHO metabolism.misc' 'sorbose' '' M
'3.99.1027' 'minor CHO metabolism.misc.Laminaribiose' 'laminaribiose' 'laminarabiose' M
'4' 'glycolysis' '' ''
'4.1' 'glycolysis.cytosolic branch' '' ''
'4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben044scf00020510ctg008_1552-9723' '(p19595|ugpa_soltu : 823.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 716.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 663.0) no description available & (gnl|cdd|85624 : 582.0) no description available & (reliability: 1432.0) & (original description: Putative fuy1, Description = UTP-glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T
'4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben044scf00040499ctg000_7515-18864' '(q43772|ugpa_horvu : 331.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Hordeum vulgare (Barley) & (at3g03250 : 309.0) Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding.; UDP-GLUCOSE PYROPHOSPHORYLASE 1 (UGP1); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-glucose pyrophosphorylase 2 (TAIR:AT5G17310.2); Has 1425 Blast hits to 1421 proteins in 430 species: Archae - 0; Bacteria - 404; Metazoa - 339; Fungi - 309; Plants - 217; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37849 : 291.0) no description available & (gnl|cdd|85624 : 257.0) no description available & (reliability: 618.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704;PF01704;PF00318;PF00318)' T
'4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf01556_177307-190341' '(p19595|ugpa_soltu : 842.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 740.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 675.0) no description available & (gnl|cdd|85624 : 580.0) no description available & (reliability: 1480.0) & (original description: Putative fuy1, Description = UTP-glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T
'4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf01958_482974-491658' '(p19595|ugpa_soltu : 829.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 738.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 673.0) no description available & (gnl|cdd|85624 : 583.0) no description available & (reliability: 1476.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T
'4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf03873_240356-251147' '(p19595|ugpa_soltu : 336.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at3g03250 : 313.0) Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding.; UDP-GLUCOSE PYROPHOSPHORYLASE 1 (UGP1); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-glucose pyrophosphorylase 2 (TAIR:AT5G17310.2); Has 1425 Blast hits to 1421 proteins in 430 species: Archae - 0; Bacteria - 404; Metazoa - 339; Fungi - 309; Plants - 217; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37849 : 296.0) no description available & (gnl|cdd|85624 : 266.0) no description available & (reliability: 626.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704;PF01704;PF00318;PF00318)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'nbv0.3scaffold3632_33869-58392' '(q9m4g4|pgmc_soltu : 1011.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 936.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 834.0) no description available & (gnl|cdd|82275 : 454.0) no description available & (reliability: 1872.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878;PF02879;PF00408;PF02880)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'nbv0.5scaffold1185_389564-426642' '(q9m4g4|pgmc_soltu : 1013.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 936.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 840.0) no description available & (gnl|cdd|82275 : 457.0) no description available & (reliability: 1872.0) & (original description: Putative pgm1, Description = Phosphoglucomutase, PFAM = PF02878;PF02880;PF02879;PF00408)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben044scf00003659ctg016_1-3680' '(q9m4g4|pgmc_soltu : 220.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 202.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 176.0) no description available & (gnl|cdd|82275 : 104.0) no description available & (reliability: 404.0) & (original description: Putative NtCPGM, Description = Cytosolic phosphoglucomutase, PFAM = PF02878)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf01697_2465592-2482641' '(q9m4g4|pgmc_soltu : 1107.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 988.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 873.0) no description available & (gnl|cdd|30382 : 476.0) no description available & (reliability: 1976.0) & (original description: Putative PGM1, Description = Phosphoglucomutase, cytoplasmic, PFAM = PF02879;PF00408;PF02880;PF02878)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf02665_914999-966356' '(q9m4g4|pgmc_soltu : 1050.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 973.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 862.0) no description available & (gnl|cdd|82275 : 469.0) no description available & (reliability: 1946.0) & (original description: Putative PGM1, Description = Phosphoglucomutase, cytoplasmic, PFAM = PF02879;PF02878;PF00408;PF02880)' T
'4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf05822_767952-775146' '(q9m4g4|pgmc_soltu : 617.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 556.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 487.0) no description available & (gnl|cdd|30382 : 278.0) no description available & (reliability: 1112.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878;PF02879)' T
'4.1.3' 'glycolysis.cytosolic branch.glucose-6-phosphate isomerase' 'niben101scf02939_259892-286386' '(at5g42740 : 982.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o82059|g6pi_spiol : 958.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (gnl|cdd|37657 : 717.0) no description available & (gnl|cdd|84705 : 708.0) no description available & (reliability: 1964.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342)' T
'4.1.3' 'glycolysis.cytosolic branch.glucose-6-phosphate isomerase' 'niben101scf14005_20684-42963' '(at5g42740 : 979.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o82059|g6pi_spiol : 961.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (gnl|cdd|37657 : 712.0) no description available & (gnl|cdd|84705 : 709.0) no description available & (reliability: 1958.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.3scaffold64791_1579-10332' '(at5g61580 : 441.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 277.0) no description available & (gnl|cdd|37651 : 270.0) no description available & (reliability: 800.0) & (original description: Putative 6PFK, Description = ATP-PFK, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 778.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1530.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 388.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1118.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1568.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1454.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 774.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1516.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1508.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf17612_201075-206529' '(at5g47810 : 681.0) phosphofructokinase 2 (PFK2); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82016 : 459.0) no description available & (gnl|cdd|37651 : 398.0) no description available & (reliability: 1362.0) & (original description: Putative PFK2, Description = ATP-dependent 6-phosphofructokinase 2, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'nbv0.3scaffold1570_46716-65514' '(q41141|pfpb_ricco : 831.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 799.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 739.0) no description available & (gnl|cdd|37651 : 401.0) no description available & (reliability: 1598.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben044scf00003448ctg020_1-11366' '(p21343|pfpb_soltu : 996.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 855.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 803.0) no description available & (gnl|cdd|37651 : 440.0) no description available & (reliability: 1710.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben044scf00006944ctg009_24787-33903' '(p21343|pfpb_soltu : 1004.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 860.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 808.0) no description available & (gnl|cdd|37651 : 444.0) no description available & (reliability: 1720.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02145_62239-73870' '(p21343|pfpb_soltu : 1025.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 883.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 829.0) no description available & (gnl|cdd|37651 : 459.0) no description available & (reliability: 1766.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02953_65288-74282' '(p21343|pfpb_soltu : 1033.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 887.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 833.0) no description available & (gnl|cdd|37651 : 462.0) no description available & (reliability: 1774.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02968_185356-205188' '(q41141|pfpb_ricco : 926.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 901.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 833.0) no description available & (gnl|cdd|37651 : 450.0) no description available & (reliability: 1802.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf05047_403863-413505' '(p21342|pfpa_soltu : 1116.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1043.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 550.0) no description available & (gnl|cdd|37651 : 528.0) no description available & (reliability: 2086.0) & (original description: Putative PFPA4, Description = Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf05226_773924-791379' '(p21342|pfpa_soltu : 1117.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1049.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 553.0) no description available & (gnl|cdd|37651 : 534.0) no description available & (reliability: 2098.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf24096_76292-84952' '(p21342|pfpa_soltu : 1176.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1052.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 555.0) no description available & (gnl|cdd|37651 : 527.0) no description available & (reliability: 2104.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T
'4.1.6' 'glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' 'niben101scf00056_356857-396574' '(at1g07110 : 1060.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; "fructose-2,6-bisphosphatase" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (gnl|cdd|35455 : 455.0) no description available & (gnl|cdd|85552 : 287.0) no description available & (reliability: 2120.0) & (original description: Putative FKFBP, Description = 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, PFAM = PF01591;PF00300;PF00686)' T
'4.1.6' 'glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' 'niben101scf08724_230628-250193' '(at1g07110 : 1101.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; "fructose-2,6-bisphosphatase" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (gnl|cdd|35455 : 464.0) no description available & (gnl|cdd|85552 : 289.0) no description available & (reliability: 2202.0) & (original description: Putative FKFBP, Description = 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, PFAM = PF01591;PF00300;PF00686)' T
'4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf02869_1719066-1734124' '(p48495|tpis_pethy : 412.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (gnl|cdd|36856 : 386.0) no description available & (at3g55440 : 379.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|73362 : 319.0) no description available & (reliability: 758.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T
'4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf03493_43919-51633' '(p48495|tpis_pethy : 424.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (at3g55440 : 395.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|36856 : 383.0) no description available & (gnl|cdd|73362 : 317.0) no description available & (reliability: 790.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T
'4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf33454_151045-160623' '(p48495|tpis_pethy : 418.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (at3g55440 : 416.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|36856 : 372.0) no description available & (gnl|cdd|73362 : 309.0) no description available & (reliability: 832.0) & (original description: Putative TPI, Description = TPI, PFAM = PF00121)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold485_75377-80175' '(p26520|g3pc_pethy : 600.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 569.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 446.0) no description available & (gnl|cdd|35876 : 377.0) no description available & (reliability: 1138.0) & (original description: Putative gapA, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00044;PF02800)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold47718_9521-14832' '(p26519|g3pc_petcr : 595.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at1g13440 : 580.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 446.0) no description available & (gnl|cdd|35876 : 367.0) no description available & (reliability: 1160.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.5scaffold4939_12539-16777' '(p26520|g3pc_pethy : 435.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 422.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 306.0) no description available & (gnl|cdd|35876 : 258.0) no description available & (reliability: 844.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf01073_565468-570420' '(p09094|g3pc_tobac : 606.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 580.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 451.0) no description available & (gnl|cdd|35876 : 380.0) no description available & (reliability: 1160.0) & (original description: Putative GAPC1, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, PFAM = PF00044;PF02800)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf02914_361345-365417' '(p09094|g3pc_tobac : 323.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 318.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 272.0) no description available & (gnl|cdd|35876 : 206.0) no description available & (reliability: 636.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf02914_362173-366864' '(p26520|g3pc_pethy : 597.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 576.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 448.0) no description available & (gnl|cdd|35876 : 386.0) no description available & (reliability: 1152.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf03099_301110-306999' '(p26519|g3pc_petcr : 601.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at1g13440 : 588.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 447.0) no description available & (gnl|cdd|35876 : 369.0) no description available & (reliability: 1176.0) & (original description: Putative GAPC, Description = Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, PFAM = PF02800;PF00044)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf04905_382304-386761' '(p09094|g3pc_tobac : 604.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 580.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 450.0) no description available & (gnl|cdd|35876 : 378.0) no description available & (reliability: 1160.0) & (original description: Putative GAPC1, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, PFAM = PF00044;PF02800)' T
'4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf08544_12332-17188' '(p26520|g3pc_pethy : 601.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 571.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 448.0) no description available & (gnl|cdd|35876 : 379.0) no description available & (reliability: 1142.0) & (original description: Putative GAPC, Description = Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, PFAM = PF00044;PF02800)' T
'4.1.9' 'glycolysis.cytosolic branch.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' 'niben101scf05250_360170-368419' '(p93338|gapn_nicpl : 999.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 922.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (gnl|cdd|37661 : 475.0) no description available & (gnl|cdd|84580 : 460.0) no description available & (reliability: 1844.0) & (original description: Putative GAPN, Description = NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00171)' T
'4.1.9' 'glycolysis.cytosolic branch.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' 'niben101scf39473_52340-59555' '(p93338|gapn_nicpl : 994.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 919.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (gnl|cdd|37661 : 472.0) no description available & (gnl|cdd|84580 : 458.0) no description available & (reliability: 1838.0) & (original description: Putative GAPN, Description = NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00171)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.3scaffold39997_10712-15185' '(gnl|cdd|84661 : 618.0) no description available & (at4g26530 : 603.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 594.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 583.0) no description available & (reliability: 1118.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.3scaffold41032_7542-12672' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 590.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 579.0) no description available & (reliability: 1104.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.5scaffold1469_367538-372476' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 592.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 583.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 576.0) no description available & (reliability: 1096.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1194.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1198.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf00675_158544-163325' '(gnl|cdd|84661 : 616.0) no description available & (at4g26530 : 595.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 587.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 577.0) no description available & (reliability: 1100.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1208.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1214.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'nbv0.3scaffold84109_1-4617' '(q42961|pgkh_tobac : 851.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 711.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 581.0) no description available & (gnl|cdd|36581 : 544.0) no description available & (reliability: 1288.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02139_377272-387984' '(gnl|cdd|80491 : 186.0) no description available & (p12783|pgky_wheat : 172.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) & (at3g12780 : 164.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (gnl|cdd|36581 : 151.0) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400003882, Description = Phosphoglycerate kinase, PFAM = PF00162;PF02390)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02461_6816-12166' '(q42962|pgky_tobac : 728.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 664.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 585.0) no description available & (gnl|cdd|36581 : 530.0) no description available & (reliability: 1328.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02461_21557-26261' '(q42961|pgkh_tobac : 853.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 708.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 582.0) no description available & (gnl|cdd|36581 : 545.0) no description available & (reliability: 1280.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf03856_11161-16555' '(q42962|pgky_tobac : 705.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 655.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 588.0) no description available & (gnl|cdd|36581 : 535.0) no description available & (reliability: 1310.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf05295_574572-580226' '(q42962|pgky_tobac : 706.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 661.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 589.0) no description available & (gnl|cdd|36581 : 540.0) no description available & (reliability: 1322.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'nbv0.5scaffold180_292288-301515' '(at3g05170 : 421.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|30755 : 93.0) no description available & (reliability: 758.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00002827ctg002_1-2000' '(at3g05170 : 228.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 82.1) no description available & (reliability: 434.0) & (original description: Putative DET1, Description = Phosphoglycerate mutase, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00021228ctg009_10537-13654' '(at3g05170 : 232.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 81.7) no description available & (reliability: 438.0) & (original description: Putative PGSC0003DMG401028569, Description = Phosphoglycerate mutase, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00057664ctg001_1-1984' '(p35494|pmgi_tobac : 258.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at1g09780 : 234.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink). & (gnl|cdd|39713 : 190.0) no description available & (gnl|cdd|69909 : 162.0) no description available & (reliability: 468.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF01676;PF06415)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00060234ctg000_1-1703' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf00582_262324-267243' '(at3g30841 : 795.0) Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT4G09520.1); Has 887 Blast hits to 887 proteins in 338 species: Archae - 293; Bacteria - 440; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|81263 : 340.0) no description available & (reliability: 1590.0) & (original description: Putative At4g09520, Description = Cofactor-independent phosphoglycerate mutase, PFAM = PF01676;PF10143)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf00963_297720-307687' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf01631_12469-17611' '(at1g58280 : 271.0) Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8). & (gnl|cdd|39951 : 204.0) no description available & (reliability: 498.0) & (original description: Putative F5J6, Description = Phosphoglycerate mutase-like protein, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf03222_423092-425524' '(at3g05170 : 150.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g08940, Description = At1g08940, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf03277_264292-269239' '(at3g30841 : 769.0) Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT4G09520.1); Has 887 Blast hits to 887 proteins in 338 species: Archae - 293; Bacteria - 440; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|81263 : 346.0) no description available & (reliability: 1538.0) & (original description: Putative At4g09520, Description = Cofactor-independent phosphoglycerate mutase, PFAM = PF10143;PF01676)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf04015_56537-61526' '(at3g05170 : 399.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.8) no description available & (reliability: 772.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf04015_94661-99064' '(at3g05170 : 273.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 90.2) no description available & (reliability: 534.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf05782_91364-99244' '(p35494|pmgi_tobac : 1064.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at3g08590 : 922.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink). & (gnl|cdd|39713 : 732.0) no description available & (gnl|cdd|81587 : 513.0) no description available & (reliability: 1844.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF01676;PF06415)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf05837_627042-637253' '(at5g64460 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 326.0) no description available & (reliability: 762.0) & (original description: Putative At5g64460, Description = Phosphoglycerate mutase-like protein 1, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf06866_137141-144014' '(at3g05170 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.1) no description available & (reliability: 770.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T
'4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf13411_548927-556536' '(p35494|pmgi_tobac : 1073.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at3g08590 : 930.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink). & (gnl|cdd|39713 : 738.0) no description available & (gnl|cdd|81587 : 509.0) no description available & (reliability: 1860.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF06415;PF01676)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'nbv0.3scaffold1517_4702-19283' '(at2g29560 : 635.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 573.0) no description available & (gnl|cdd|48188 : 531.0) no description available & (p42896|eno_ricco : 446.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1270.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF03952;PF00113)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'nbv0.3scaffold13303_37321-42871' '(at2g36530 : 793.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (p42895|eno2_maize : 786.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) - Zea mays (Maize) & (gnl|cdd|37881 : 713.0) no description available & (gnl|cdd|48188 : 685.0) no description available & (reliability: 1586.0) & (original description: Putative PGH1, Description = Enolase, PFAM = PF03952;PF00113)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben044scf00020804ctg002_16207-21175' '(q9lei9|eno2_hevbr : 510.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) (Allergen Hev b 9) - Hevea brasiliensis (Para rubber tree) & (at2g36530 : 508.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (gnl|cdd|37881 : 447.0) no description available & (gnl|cdd|48188 : 447.0) no description available & (reliability: 1016.0) & (original description: Putative eno, Description = Enolase, PFAM = PF00113;PF03952)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf05392_142686-148752' '(at2g36530 : 792.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (p42895|eno2_maize : 782.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) - Zea mays (Maize) & (gnl|cdd|37881 : 713.0) no description available & (gnl|cdd|48188 : 682.0) no description available & (reliability: 1584.0) & (original description: Putative PGH1, Description = Enolase, PFAM = PF00113;PF03952)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf07672_35307-45298' '(at2g29560 : 790.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 654.0) no description available & (gnl|cdd|48188 : 597.0) no description available & (p42896|eno_ricco : 508.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1580.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF00113;PF03952)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf10384_319701-335243' '(at2g29560 : 793.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 653.0) no description available & (gnl|cdd|48188 : 604.0) no description available & (p42896|eno_ricco : 504.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1586.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF00113;PF03952)' T
'4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf11341_1011-7309' '(at1g74030 : 792.0) Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.; enolase 1 (ENO1); FUNCTIONS IN: phosphopyruvate hydratase activity; INVOLVED IN: trichome morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13710 Blast hits to 13689 proteins in 3755 species: Archae - 283; Bacteria - 5826; Metazoa - 2303; Fungi - 284; Plants - 460; Viruses - 0; Other Eukaryotes - 4554 (source: NCBI BLink). & (gnl|cdd|37881 : 704.0) no description available & (gnl|cdd|48188 : 655.0) no description available & (q43130|eno_mescr : 593.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1584.0) & (original description: Putative ENO1, Description = Enolase 1, chloroplastic, PFAM = PF03952;PF00113)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'nbv0.3scaffold19941_416-4060' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 253.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 498.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'nbv0.3scaffold41034_6635-17947' '(at3g52990 : 904.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 497.0) no description available & (gnl|cdd|29370 : 385.0) no description available & (q42806|kpyc_soybn : 383.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1808.0) & (original description: Putative PK5, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben044scf00008250ctg000_3268-9784' '(at3g49160 : 709.0) Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 14581 Blast hits to 9515 proteins in 2692 species: Archae - 258; Bacteria - 9751; Metazoa - 816; Fungi - 346; Plants - 707; Viruses - 0; Other Eukaryotes - 2703 (source: NCBI BLink). & (gnl|cdd|82521 : 522.0) no description available & (gnl|cdd|37534 : 130.0) no description available & (p55964|kpyg_ricco : 95.5) Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40) (Fragment) - Ricinus communis (Castor bean) & (reliability: 1418.0) & (original description: Putative PKP4, Description = Plastidial pyruvate kinase 4, chloroplastic, PFAM = PF00224;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben044scf00034083ctg004_13492-16997' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 252.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 496.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf00155_431837-439798' '(q42954|kpyc_tobac : 958.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 851.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 632.0) no description available & (gnl|cdd|29370 : 621.0) no description available & (reliability: 1626.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf00417_60515-70440' '(at3g52990 : 937.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 508.0) no description available & (gnl|cdd|29370 : 392.0) no description available & (q42806|kpyc_soybn : 378.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1874.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf01273_50626-58643' '(q42806|kpyc_soybn : 886.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 847.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 643.0) no description available & (gnl|cdd|37534 : 623.0) no description available & (reliability: 1694.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf01966_185221-191626' '(at3g49160 : 711.0) Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 14581 Blast hits to 9515 proteins in 2692 species: Archae - 258; Bacteria - 9751; Metazoa - 816; Fungi - 346; Plants - 707; Viruses - 0; Other Eukaryotes - 2703 (source: NCBI BLink). & (gnl|cdd|82521 : 518.0) no description available & (gnl|cdd|37534 : 130.0) no description available & (p55964|kpyg_ricco : 95.9) Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40) (Fragment) - Ricinus communis (Castor bean) & (reliability: 1422.0) & (original description: Putative PKP4, Description = Plastidial pyruvate kinase 4, chloroplastic, PFAM = PF00224;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02502_1642603-1650602' '(at3g52990 : 952.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 515.0) no description available & (gnl|cdd|29370 : 395.0) no description available & (q42806|kpyc_soybn : 379.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1904.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02622_968223-992700' '(at3g52990 : 897.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 490.0) no description available & (q42806|kpyc_soybn : 382.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (gnl|cdd|29370 : 381.0) no description available & (reliability: 1794.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02913_18713-24773' '(p22200|kpyc_soltu : 915.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Solanum tuberosum (Potato) & (at5g08570 : 857.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 651.0) no description available & (gnl|cdd|37534 : 629.0) no description available & (reliability: 1714.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf03732_812717-820986' '(at3g52990 : 948.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 509.0) no description available & (gnl|cdd|29370 : 386.0) no description available & (q42954|kpyc_tobac : 375.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (reliability: 1896.0) & (original description: Putative pyk2, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf04292_1180122-1186435' '(q42954|kpyc_tobac : 964.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 856.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 634.0) no description available & (gnl|cdd|29370 : 622.0) no description available & (reliability: 1632.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf12653_215769-228147' '(q42806|kpyc_soybn : 876.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 843.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 638.0) no description available & (gnl|cdd|37534 : 617.0) no description available & (reliability: 1686.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'nbv0.3scaffold24120_21262-29518' '(p27154|capp_tobac : 1791.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1650.0) no description available & (at3g14940 : 1612.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3224.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'nbv0.5scaffold2529_290307-306867' '(at1g68750 : 1560.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (gnl|cdd|80444 : 749.0) no description available & (q6r2v6|capp2_chlre : 655.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 3120.0) & (original description: Putative ppc3, Description = Phosphoenolpyruvate carboxylase protein, PFAM = PF00311;PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf00031_46039-54455' '(p27154|capp_tobac : 1757.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1731.0) no description available & (at3g14940 : 1729.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3458.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf00312_285696-297984' '(at1g68750 : 1558.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (gnl|cdd|80444 : 748.0) no description available & (q6r2v6|capp2_chlre : 656.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 3116.0) & (original description: Putative ppc3, Description = Phosphoenolpyruvate carboxylase protein, PFAM = PF00311;PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03439_360247-368745' '(p27154|capp_tobac : 1829.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1682.0) no description available & (at3g14940 : 1648.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3296.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03487_89754-93707' '(gnl|cdd|64189 : 803.0) no description available & (at1g53310 : 790.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q02909|capp1_soybn : 786.0) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase) (PEPC 1) - Glycine max (Soybean) & (reliability: 1580.0) & (original description: Putative p107, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03628_1545942-1555543' '(gnl|cdd|64189 : 1724.0) no description available & (q02909|capp1_soybn : 1712.0) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase) (PEPC 1) - Glycine max (Soybean) & (at1g53310 : 1706.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 3412.0) & (original description: Putative ppc2, Description = Phosphoenolpyruvate carboxylase 1, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf04036_421300-428955' '(p27154|capp_tobac : 1894.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1742.0) no description available & (at3g14940 : 1708.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3416.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf07352_1-5800' '(p29196|capp_soltu : 707.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (gnl|cdd|64189 : 695.0) no description available & (at3g14940 : 689.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 1378.0) & (original description: Putative pepC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf08191_229960-233537' '(gnl|cdd|64189 : 804.0) no description available & (p29196|capp_soltu : 781.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (at1g53310 : 751.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1502.0) & (original description: Putative p107, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf25430_50582-59088' '(p29196|capp_soltu : 1820.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (gnl|cdd|64189 : 1772.0) no description available & (at1g53310 : 1714.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 3428.0) & (original description: Putative PPC1, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'nbv0.5scaffold230_923267-929026' '(at1g12680 : 428.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 260.0) no description available & (gnl|cdd|29142 : 255.0) no description available & (p28582|cdpk_dauca : 227.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 856.0) & (original description: Putative Sb07g023380, Description = Putative uncharacterized protein Sb07g023380, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'nbv0.5scaffold1878_352007-358074' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 268.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (p28583|cdpk_soybn : 210.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 600.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben044scf00012054ctg004_1-2993' '(at1g08650 : 323.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p49101|cdpk2_maize : 241.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 646.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben044scf00061397ctg001_3372-6586' '(at1g08650 : 324.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28582|cdpk_dauca : 247.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 648.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf01005_184054-190114' '(at1g12680 : 484.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 273.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28583|cdpk_soybn : 226.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 968.0) & (original description: Putative cdpk1, Description = Calcium-dependent protein kinase, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf01724_121392-127592' '(at1g12680 : 497.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 279.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28583|cdpk_soybn : 243.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 994.0) & (original description: Putative PEPKR2, Description = Serine/threonine-protein kinase PEPKR2, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf02724_653688-658357' '(at3g04530 : 304.0) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (gnl|cdd|35255 : 284.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (p28582|cdpk_dauca : 258.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 596.0) & (original description: Putative PPCK2, Description = Phosphoenolpyruvate carboxylase kinase 2, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04332_43218-46140' '(at1g08650 : 325.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 287.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28582|cdpk_dauca : 241.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 650.0) & (original description: Putative SNIK, Description = Phosphoenolpyruvate carboxylase-kinase, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04332_268696-271608' '(at1g08650 : 318.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (p28582|cdpk_dauca : 253.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 636.0) & (original description: Putative PpcK4, Description = Phosphoenolpyruvate carboxylase kinase 4, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04882_37028-39955' '(at1g08650 : 328.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (p28582|cdpk_dauca : 246.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 656.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf05552_1065150-1069664' '(at1g12580 : 539.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (gnl|cdd|35255 : 318.0) no description available & (p53684|cdpk3_orysa : 286.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|29142 : 284.0) no description available & (reliability: 1078.0) & (original description: Putative PEPKR1, Description = Phosphoenolpyruvate carboxylase-related kinase 1, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf05680_135654-143478' '(at1g12680 : 489.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 274.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p53684|cdpk3_orysa : 231.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 978.0) & (original description: Putative PEPKR2, Description = Serine/threonine-protein kinase PEPKR2, PFAM = PF00069)' T
'4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf14945_96516-100392' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 278.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 228.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 600.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.2' 'glycolysis.plastid branch' '' ''
'4.2.1' 'glycolysis.plastid branch.UGPase' '' ''
'4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'nbv0.3scaffold861_635-21422' '(q9m4g5|pgmp_soltu : 1059.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at5g51820 : 1006.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (gnl|cdd|35844 : 864.0) no description available & (gnl|cdd|82275 : 507.0) no description available & (reliability: 2012.0) & (original description: Putative PGMP, Description = Phosphoglucomutase, chloroplastic, PFAM = PF02880;PF02879;PF00408;PF02878)' T
'4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben044scf00030425ctg001_1-8970' '(at5g17530 : 493.0) phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1). & (gnl|cdd|36434 : 273.0) no description available & (gnl|cdd|31306 : 120.0) no description available & (reliability: 986.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02880;PF02879)' T
'4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf00714_27969-64139' '(at5g17530 : 870.0) phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1). & (gnl|cdd|36434 : 453.0) no description available & (gnl|cdd|31306 : 233.0) no description available & (reliability: 1740.0) & (original description: Putative algC, Description = Phosphomannomutase/phosphoglucomutase, PFAM = PF02879;PF02878;PF02880)' T
'4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf01582_790150-810310' '(at1g70820 : 920.0) phosphoglucomutase, putative / glucose phosphomutase, putative; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucosamine mutase family protein (TAIR:AT5G17530.2); Has 16953 Blast hits to 16952 proteins in 2734 species: Archae - 435; Bacteria - 11347; Metazoa - 78; Fungi - 46; Plants - 64; Viruses - 0; Other Eukaryotes - 4983 (source: NCBI BLink). & (gnl|cdd|36434 : 500.0) no description available & (gnl|cdd|31306 : 216.0) no description available & (reliability: 1840.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02880;PF02878;PF02879)' T
'4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf05552_41759-44473' '(q9m4g5|pgmp_soltu : 130.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at5g51820 : 112.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (gnl|cdd|35844 : 100.0) no description available & (reliability: 224.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878)' T
'4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben044scf00025267ctg003_39992-48418' '(at4g24620 : 1004.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 552.0) no description available & (gnl|cdd|80564 : 509.0) no description available & (p42862|g6pia_orysa : 155.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative PGI1, Description = Glucose-6-phosphate isomerase 1, chloroplastic, PFAM = PF00342;PF00342)' T
'4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben101scf02659_93824-102508' '(at4g24620 : 1010.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 556.0) no description available & (gnl|cdd|80564 : 514.0) no description available & (p42862|g6pia_orysa : 158.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2020.0) & (original description: Putative PGI1, Description = Glucose-6-phosphate isomerase 1, chloroplastic, PFAM = PF00342;PF00342)' T
'4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben101scf14282_70887-79347' '(at4g24620 : 1007.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 560.0) no description available & (gnl|cdd|80564 : 510.0) no description available & (p42862|g6pia_orysa : 155.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2014.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342;PF00342)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.3scaffold59360_1-11357' '(at2g22480 : 860.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 475.0) no description available & (gnl|cdd|37651 : 381.0) no description available & (reliability: 1720.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.3scaffold64791_1579-10332' '(at5g61580 : 441.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 277.0) no description available & (gnl|cdd|37651 : 270.0) no description available & (reliability: 882.0) & (original description: Putative 6PFK, Description = ATP-PFK, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold2370_477998-498686' '(at5g61580 : 808.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 465.0) no description available & (gnl|cdd|37651 : 460.0) no description available & (reliability: 1616.0) & (original description: Putative PFK4, Description = ATP-dependent 6-phosphofructokinase 4, chloroplastic, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 768.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1476.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 354.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1090.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00038302ctg001_1-11879' '(at2g22480 : 856.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 467.0) no description available & (gnl|cdd|37651 : 375.0) no description available & (reliability: 1712.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00048745ctg000_27412-32795' '(at5g61580 : 334.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 198.0) no description available & (gnl|cdd|37651 : 176.0) no description available & (reliability: 668.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf00163_2288521-2303794' '(at5g61580 : 804.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 467.0) no description available & (gnl|cdd|37651 : 461.0) no description available & (reliability: 1608.0) & (original description: Putative PFK4, Description = ATP-dependent 6-phosphofructokinase 4, chloroplastic, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1558.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1404.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 762.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1462.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf04950_440031-453318' '(at2g22480 : 848.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 474.0) no description available & (gnl|cdd|37651 : 382.0) no description available & (reliability: 1696.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T
'4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1432.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.2.5' 'glycolysis.plastid branch.pyrophosphate-fructose-6-P phosphotransferase' '' ''
'4.2.6' 'glycolysis.plastid branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' '' ''
'4.2.7' 'glycolysis.plastid branch.triosephosphate isomerase (TPI)' '' ''
'4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold67674_2454-9382' '(at1g16300 : 554.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (GAPCP-2); CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (TAIR:AT1G79530.1); Has 25238 Blast hits to 25227 proteins in 6343 species: Archae - 51; Bacteria - 10898; Metazoa - 2382; Fungi - 2852; Plants - 3834; Viruses - 0; Other Eukaryotes - 5221 (source: NCBI BLink). & (gnl|cdd|30406 : 464.0) no description available & (p09094|g3pc_tobac : 421.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35876 : 392.0) no description available & (reliability: 1108.0) & (original description: Putative GAPCP2, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic, PFAM = PF02800;PF00044)' T
'4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf12280_166522-173858' '(at1g16300 : 488.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (GAPCP-2); CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (TAIR:AT1G79530.1); Has 25238 Blast hits to 25227 proteins in 6343 species: Archae - 51; Bacteria - 10898; Metazoa - 2382; Fungi - 2852; Plants - 3834; Viruses - 0; Other Eukaryotes - 5221 (source: NCBI BLink). & (gnl|cdd|30406 : 419.0) no description available & (p34924|g3pc_pinsy : 374.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Pinus sylvestris (Scots pine) & (gnl|cdd|35876 : 362.0) no description available & (reliability: 976.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00044;PF02800)' T
'4.2.11' 'glycolysis.plastid branch.3-phosphoglycerate kinase (PGK)' '' ''
'4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben044scf00002185ctg002_2906-7286' '(at1g22170 : 387.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 299.0) no description available & (gnl|cdd|35456 : 197.0) no description available & (reliability: 774.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben044scf00002185ctg002_2960-7187' '(at1g22170 : 377.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 196.0) no description available & (reliability: 754.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben101scf06375_229031-241691' '(at1g22170 : 471.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 312.0) no description available & (gnl|cdd|35456 : 219.0) no description available & (reliability: 942.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben101scf13679_130740-140185' '(at1g22170 : 394.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 195.0) no description available & (reliability: 788.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.2.13' 'glycolysis.plastid branch.enolase' '' ''
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.3scaffold19941_416-4060' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 253.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 506.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.3scaffold42673_12923-18186' '(q43117|kpya_ricco : 517.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 516.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 349.0) no description available & (gnl|cdd|37534 : 307.0) no description available & (reliability: 1032.0) & (original description: Putative TIDP3692, Description = Pyruvate kinase, PFAM = PF00224;PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.5scaffold1798_269840-283271' '(q40545|kpya_tobac : 1113.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 873.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 397.0) no description available & (gnl|cdd|37534 : 341.0) no description available & (reliability: 1746.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.5scaffold7048_73368-76992' '(q40545|kpya_tobac : 417.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 387.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 192.0) no description available & (gnl|cdd|37534 : 151.0) no description available & (reliability: 774.0) & (original description: Putative E592, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00016971ctg003_12106-20056' '(q40545|kpya_tobac : 870.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 809.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 370.0) no description available & (gnl|cdd|37534 : 311.0) no description available & (reliability: 1618.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224;PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00020080ctg003_475-4451' '(q43117|kpya_ricco : 470.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 461.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 305.0) no description available & (gnl|cdd|37534 : 262.0) no description available & (reliability: 922.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00034083ctg004_13492-16997' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 252.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 504.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf00155_431837-439798' '(q42954|kpyc_tobac : 958.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 851.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 632.0) no description available & (gnl|cdd|29370 : 621.0) no description available & (reliability: 1702.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf00276_790989-803005' '(q40546|kpyg_tobac : 998.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at1g32440 : 758.0) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.; plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink). & (gnl|cdd|37534 : 506.0) no description available & (gnl|cdd|30817 : 464.0) no description available & (reliability: 1516.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf04292_1180122-1186435' '(q42954|kpyc_tobac : 964.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 856.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 634.0) no description available & (gnl|cdd|29370 : 622.0) no description available & (reliability: 1712.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf05381_400543-413467' '(q40545|kpya_tobac : 1105.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 879.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 399.0) no description available & (gnl|cdd|37534 : 342.0) no description available & (reliability: 1758.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf05710_363589-369226' '(q43117|kpya_ricco : 593.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 589.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 383.0) no description available & (gnl|cdd|37534 : 339.0) no description available & (reliability: 1178.0) & (original description: Putative PK6, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf06684_344827-354906' '(at5g52920 : 950.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40546|kpyg_tobac : 746.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37534 : 534.0) no description available & (gnl|cdd|81761 : 477.0) no description available & (reliability: 1900.0) & (original description: Putative PKP2, Description = Plastidial pyruvate kinase 2, PFAM = PF02887;PF00224)' T
'4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf08737_26741-34774' '(q40545|kpya_tobac : 963.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 873.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 398.0) no description available & (gnl|cdd|37534 : 339.0) no description available & (reliability: 1746.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T
'4.2.15' 'glycolysis.plastid branch.phospho-enol-pyruvate carboxylase (PEPC)' '' ''
'4.3' 'glycolysis.unclear/dually targeted' '' ''
'4.3.1' 'glycolysis.unclear/dually targeted.UGPase' '' ''
'4.3.2' 'glycolysis.unclear/dually targeted.phosphoglucomutase (PGM)' '' ''
'4.3.3' 'glycolysis.unclear/dually targeted.glucose-6-phosphate isomerase' '' ''
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 776.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1500.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 388.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1094.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1544.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1428.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 772.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1486.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1486.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T
'4.3.5' 'glycolysis.unclear/dually targeted.pyrophosphate-fructose-6-P phosphotransferase' '' ''
'4.3.6' 'glycolysis.unclear/dually targeted.fructose-2,6-bisphosphatase (Fru2,6BisPase)' '' ''
'4.3.7' 'glycolysis.unclear/dually targeted.triosephosphate isomerase (TPI)' '' ''
'4.3.8' 'glycolysis.unclear/dually targeted.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' '' ''
'4.3.9' 'glycolysis.unclear/dually targeted.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' '' ''
'4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1170.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1176.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1180.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1186.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T
'4.3.11' 'glycolysis.unclear/dually targeted.3-phosphoglycerate kinase (PGK)' '' ''
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold13_1633414-1642939' '(at5g22620 : 562.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 143.0) no description available & (gnl|cdd|35456 : 129.0) no description available & (reliability: 1124.0) & (original description: Putative c1pp, Description = 2-carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase, PFAM = PF00300;PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold180_292288-301515' '(at3g05170 : 421.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|30755 : 93.0) no description available & (reliability: 842.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold1122_633875-637673' '(at3g05170 : 201.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative At1g08940, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = )' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002185ctg002_2906-7286' '(at1g22170 : 387.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 299.0) no description available & (gnl|cdd|35456 : 197.0) no description available & (reliability: 728.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002185ctg002_2960-7187' '(at1g22170 : 377.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 196.0) no description available & (reliability: 714.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002827ctg001_1-3508' '(at3g05170 : 202.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative At1g08940, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = )' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002827ctg002_1-2000' '(at3g05170 : 228.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 82.1) no description available & (reliability: 456.0) & (original description: Putative DET1, Description = Phosphoglycerate mutase, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00006981ctg008_2005-11620' '(at3g05170 : 286.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 99.4) no description available & (reliability: 572.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00015114ctg004_1-3129' '(at3g50520 : 202.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|35456 : 111.0) no description available & (gnl|cdd|30755 : 86.0) no description available & (reliability: 404.0) & (original description: Putative IPSP, Description = Hypothetical_protein, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00019447ctg004_1-5200' '(at5g22620 : 179.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 133.0) no description available & (gnl|cdd|35456 : 106.0) no description available & (reliability: 358.0) & (original description: Putative c1pp, Description = Phosphoglycerate mutase, putative, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00021228ctg009_10537-13654' '(at3g05170 : 232.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 81.7) no description available & (reliability: 464.0) & (original description: Putative PGSC0003DMG401028569, Description = Phosphoglycerate mutase, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00060234ctg000_1-1703' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf00616_212464-216944' '(at3g05170 : 238.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 87.9) no description available & (reliability: 476.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf00963_297720-307687' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf03222_423092-425524' '(at3g05170 : 150.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At1g08940, Description = At1g08940, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04015_56537-61526' '(at3g05170 : 399.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.8) no description available & (reliability: 798.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04015_94661-99064' '(at3g05170 : 273.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 90.2) no description available & (reliability: 546.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04899_274145-280712' '(at5g22620 : 176.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 126.0) no description available & (gnl|cdd|35456 : 103.0) no description available & (reliability: 352.0) & (original description: Putative c1pp, Description = Os01g0237100 protein, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf05813_866259-876706' '(at3g50520 : 292.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|35456 : 175.0) no description available & (gnl|cdd|30755 : 157.0) no description available & (reliability: 584.0) & (original description: Putative At3g50520, Description = Phosphoglycerate mutase-like protein 4, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf06375_229031-241691' '(at1g22170 : 471.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 312.0) no description available & (gnl|cdd|35456 : 219.0) no description available & (reliability: 860.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf06866_137141-144014' '(at3g05170 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.1) no description available & (reliability: 844.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T
'4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf13679_130740-140185' '(at1g22170 : 394.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 195.0) no description available & (reliability: 736.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T
'4.3.13' 'glycolysis.unclear/dually targeted.enolase' '' ''
'4.3.14' 'glycolysis.unclear/dually targeted.pyruvate kinase (PK)' '' ''
'4.3.15' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase (PEPC)' '' ''
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'nbv0.5scaffold1878_352007-358074' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 268.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (p28583|cdpk_soybn : 210.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 548.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben044scf00012054ctg004_1-2993' '(at1g08650 : 323.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p49101|cdpk2_maize : 241.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 634.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben044scf00061397ctg001_3372-6586' '(at1g08650 : 324.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28582|cdpk_dauca : 247.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf02724_653688-658357' '(at3g04530 : 304.0) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (gnl|cdd|35255 : 284.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (p28582|cdpk_dauca : 258.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 608.0) & (original description: Putative PPCK2, Description = Phosphoenolpyruvate carboxylase kinase 2, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04332_43218-46140' '(at1g08650 : 325.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 287.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28582|cdpk_dauca : 241.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 638.0) & (original description: Putative SNIK, Description = Phosphoenolpyruvate carboxylase-kinase, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04332_268696-271608' '(at1g08650 : 318.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (p28582|cdpk_dauca : 253.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 634.0) & (original description: Putative PpcK4, Description = Phosphoenolpyruvate carboxylase kinase 4, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04882_37028-39955' '(at1g08650 : 328.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (p28582|cdpk_dauca : 246.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 646.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf14945_96516-100392' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 278.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 228.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 562.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T
'4.1001' 'glycolysis' 'dihydroxyacetone-p' 'PS.calvin cycle; photorespiration; glycolysis' M
'4.1002' 'glycolysis' 'glyceraldehyde-3-p' 'PS.calvin cycle; photorespiration; glycolysis' M
'4.1003' 'glycolysis' 'glycerate-1,3-bisp' 'PS.calvin cycle; photorespiration; glycolysis' M
'4.1004' 'glycolysis' 'glycerate-3-p' 'PS.calvin cycle; photorespiration; glycolysis' M
'4.1005' 'glycolysis' 'p-enolpyruvate' 'glyclolysis' M
'4.1006' 'glycolysis' 'pyruvate' 'glyclolysis' M
'4.1007' 'glycolysis' 'glycerate-2-p' 'glyclolysis' M
'5' 'fermentation' '' ''
'5.1' 'fermentation.LDH' 'niben101scf03374_379984-385132' '(at4g17260 : 521.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: L-lactate dehydrogenase (InterPro:IPR011304), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), L-lactate dehydrogenase, active site (InterPro:IPR018177), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 16816 Blast hits to 16800 proteins in 5066 species: Archae - 248; Bacteria - 11859; Metazoa - 1173; Fungi - 517; Plants - 405; Viruses - 0; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|36708 : 463.0) no description available & (p22989|ldhb_horvu : 444.0) L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|58488 : 395.0) no description available & (reliability: 1042.0) & (original description: Putative ldh, Description = L-lactate dehydrogenase, PFAM = PF00056;PF02866)' T
'5.2' 'fermentation.PDC' 'nbv0.3scaffold55068_1-5391' '(at5g17380 : 897.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: chlorsulfuron/imidazolinone resistant 1 (TAIR:AT3G48560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36399 : 687.0) no description available & (gnl|cdd|82890 : 573.0) no description available & (p09114|ilv2_tobac : 139.0) Acetolactate synthase 2, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase II) (Acetohydroxy-acid synthase II) (ALS II) - Nicotiana tabacum (Common tobacco) & (reliability: 1794.0) & (original description: Putative HACL, Description = 2-hydroxyacyl-CoA lyase, PFAM = PF02776;PF00205;PF02775)' T
'5.2' 'fermentation.PDC' 'niben101scf00149_1298699-1304147' '(at5g54960 : 1020.0) pyruvate decarboxylase-2; pyruvate decarboxylase-2 (PDC2); FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, carboxy-lyase activity, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: response to hypoxia; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51848|pdc2_orysa : 975.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (gnl|cdd|36398 : 872.0) no description available & (gnl|cdd|33742 : 517.0) no description available & (reliability: 2040.0) & (original description: Putative PDC2, Description = Pyruvate decarboxylase 2, PFAM = PF02776;PF00205;PF02775)' T
'5.2' 'fermentation.PDC' 'niben101scf01212_1-6982' '(p51850|pdc1_pea : 949.0) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC) - Pisum sativum (Garden pea) & (at4g33070 : 871.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|36398 : 752.0) no description available & (gnl|cdd|33742 : 478.0) no description available & (reliability: 1742.0) & (original description: Putative PDC1, Description = Pyruvate decarboxylase 1, PFAM = PF02775;PF00205;PF02776)' T
'5.2' 'fermentation.PDC' 'niben101scf02538_678393-684028' '(at5g17380 : 897.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: chlorsulfuron/imidazolinone resistant 1 (TAIR:AT3G48560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36399 : 688.0) no description available & (gnl|cdd|82890 : 575.0) no description available & (p27818|ilv1_brana : 143.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Brassica napus (Rape) & (reliability: 1794.0) & (original description: Putative oxc, Description = Oxalyl-CoA decarboxylase, PFAM = PF02775;PF00205;PF02776)' T
'5.2' 'fermentation.PDC' 'niben101scf03716_64504-69204' '(p51846|pdc2_tobac : 1134.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Nicotiana tabacum (Common tobacco) & (at4g33070 : 988.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|36398 : 875.0) no description available & (gnl|cdd|33742 : 528.0) no description available & (reliability: 1976.0) & (original description: Putative PDC2, Description = Pyruvate decarboxylase 2, PFAM = PF02776;PF00205;PF02775)' T
'5.2' 'fermentation.PDC' 'niben101scf05368_667471-672117' '(at4g33070 : 1006.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (p51848|pdc2_orysa : 965.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (gnl|cdd|36398 : 883.0) no description available & (gnl|cdd|33742 : 524.0) no description available & (reliability: 2012.0) & (original description: Putative PDC1, Description = Pyruvate decarboxylase 1, PFAM = PF00205;PF02775;PF02776)' T
'5.3' 'fermentation.ADH' 'nbv0.3scaffold3657_15751-23936' '(gnl|cdd|35245 : 317.0) no description available & (gnl|cdd|31262 : 266.0) no description available & (at1g32780 : 224.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 32235 Blast hits to 32213 proteins in 3118 species: Archae - 738; Bacteria - 20422; Metazoa - 1293; Fungi - 2369; Plants - 4116; Viruses - 3; Other Eukaryotes - 3294 (source: NCBI BLink). & (p48977|adh_maldo : 223.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 412.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'5.3' 'fermentation.ADH' 'nbv0.3scaffold46426_10452-16049' '(p25141|adh1_pethy : 702.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (at1g77120 : 639.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (gnl|cdd|35245 : 576.0) no description available & (gnl|cdd|31262 : 425.0) no description available & (reliability: 1278.0) & (original description: Putative ADH1, Description = Alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T
'5.3' 'fermentation.ADH' 'nbv0.5scaffold674_398972-406791' '(gnl|cdd|35245 : 385.0) no description available & (gnl|cdd|31262 : 320.0) no description available & (p48977|adh_maldo : 275.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 271.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T
'5.3' 'fermentation.ADH' 'nbv0.5scaffold2906_118583-123400' '(p25141|adh1_pethy : 596.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (at1g77120 : 546.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (gnl|cdd|35245 : 493.0) no description available & (gnl|cdd|31262 : 376.0) no description available & (reliability: 1092.0) & (original description: Putative ADH1, Description = Alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T
'5.3' 'fermentation.ADH' 'niben101scf01658_127644-135677' '(gnl|cdd|35245 : 398.0) no description available & (gnl|cdd|31262 : 329.0) no description available & (p48977|adh_maldo : 286.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 280.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T
'5.5' 'fermentation.phosphate acetyltransferase' '' ''
'5.6' 'fermentation.acetate kinase' '' ''
'5.8' 'fermentation.pyruvate::ferredoxin oxidoreductase' '' ''
'5.10' 'fermentation.aldehyde dehydrogenase' 'nbv0.5scaffold3889_61350-70968' '(at3g48000 : 833.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 703.0) no description available & (gnl|cdd|84580 : 590.0) no description available & (p17202|badh_spiol : 373.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1666.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'nbv0.5scaffold5306_128611-138186' '(at3g24503 : 592.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 531.0) no description available & (gnl|cdd|84580 : 492.0) no description available & (p17202|badh_spiol : 323.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1184.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_240590-249470' '(gnl|cdd|37667 : 120.0) no description available & (at4g36250 : 106.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ALDH3, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_240623-263932' '(gnl|cdd|37667 : 554.0) no description available & (at4g36250 : 531.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|31216 : 282.0) no description available & (p17202|badh_spiol : 125.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1062.0) & (original description: Putative gabD, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_248377-253787' '(gnl|cdd|37667 : 157.0) no description available & (at4g36250 : 144.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|84580 : 95.2) no description available & (reliability: 288.0) & (original description: Putative aldA, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00789_52590-62977' '(at3g24503 : 717.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 636.0) no description available & (gnl|cdd|84580 : 587.0) no description available & (p17202|badh_spiol : 395.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1434.0) & (original description: Putative rf2c, Description = Cytosolic aldehyde dehydrogenase RF2C, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00802_57598-68605' '(at3g48000 : 880.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 718.0) no description available & (gnl|cdd|84580 : 598.0) no description available & (p17202|badh_spiol : 381.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1760.0) & (original description: Putative aldh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf03534_129259-137450' '(at1g23800 : 845.0) Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.; aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink). & (gnl|cdd|37661 : 728.0) no description available & (gnl|cdd|84580 : 606.0) no description available & (p17202|badh_spiol : 372.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1690.0) & (original description: Putative rf2, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf03998_34621-43376' '(at1g54100 : 815.0) Aldehyde dehydrogenase; aldehyde dehydrogenase 7B4 (ALDH7B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 5F1 (TAIR:AT1G79440.1); Has 58930 Blast hits to 58766 proteins in 3009 species: Archae - 476; Bacteria - 35564; Metazoa - 2491; Fungi - 2115; Plants - 1217; Viruses - 0; Other Eukaryotes - 17067 (source: NCBI BLink). & (q9zpb7|al7a1_maldo : 805.0) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin-1) (Matured fruit 60 kDa protein) (MF-60) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|37664 : 793.0) no description available & (gnl|cdd|84580 : 428.0) no description available & (reliability: 1630.0) & (original description: Putative alh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf04296_79910-86571' '(at3g48000 : 881.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 721.0) no description available & (gnl|cdd|84580 : 598.0) no description available & (p17202|badh_spiol : 379.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1762.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf05304_13575-24089' '(at1g44170 : 681.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (gnl|cdd|37667 : 649.0) no description available & (gnl|cdd|31216 : 294.0) no description available & (p17202|badh_spiol : 149.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1362.0) & (original description: Putative ALDH, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf07034_471093-478912' '(at4g36250 : 634.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|37667 : 596.0) no description available & (gnl|cdd|31216 : 276.0) no description available & (p28237|badh_betvu : 144.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (reliability: 1268.0) & (original description: Putative ALDH3F1, Description = Aldehyde dehydrogenase family 3 member F1, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf08341_734692-744378' '(at3g24503 : 686.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 641.0) no description available & (gnl|cdd|84580 : 589.0) no description available & (p17202|badh_spiol : 365.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1372.0) & (original description: Putative rf2c, Description = Cytosolic aldehyde dehydrogenase RF2C, PFAM = PF00171)' T
'5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf36674_41062-46981' '(at1g23800 : 843.0) Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.; aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink). & (gnl|cdd|37661 : 723.0) no description available & (gnl|cdd|84580 : 609.0) no description available & (p17202|badh_spiol : 374.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1686.0) & (original description: Putative aldh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'5.1001' 'fermentation' 'lactate' 'fermentation' M
'5.1002' 'fermentation' 'alanine' 'amino acid synthesis.alanine; amino acid degradation.alanine; amino acid degradation.tryptophan; Co-factor metabolism; fermentation' M
'6' 'gluconeogenesis / glyoxylate cycle' 'niben044scf00009193ctg005_23536-25764' '(at3g16910 : 471.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 426.0) no description available & (gnl|cdd|36391 : 273.0) no description available & (q42982|4cl2_orysa : 89.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T
'6' 'gluconeogenesis / glyoxylate cycle' 'niben101scf00094_379735-388916' '(at3g16910 : 902.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 774.0) no description available & (gnl|cdd|36391 : 492.0) no description available & (o24145|4cl1_tobac : 122.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1804.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T
'6' 'gluconeogenesis / glyoxylate cycle' 'niben101scf09203_169270-176966' '(at3g16910 : 886.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 794.0) no description available & (gnl|cdd|36391 : 494.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1772.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF13193;PF00501)' T
'6.1' 'gluconeogenesis / glyoxylate cycle.citrate synthase' 'nbv0.5scaffold5609_100124-118855' '(at3g58750 : 845.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 829.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|81661 : 504.0) no description available & (gnl|cdd|37828 : 492.0) no description available & (reliability: 1690.0) & (original description: Putative aarA, Description = Citrate synthase, PFAM = PF00285)' T
'6.1' 'gluconeogenesis / glyoxylate cycle.citrate synthase' 'niben101scf00996_107570-117708' '(at3g58750 : 846.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 833.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|81661 : 506.0) no description available & (gnl|cdd|37828 : 494.0) no description available & (reliability: 1692.0) & (original description: Putative aarA, Description = Citrate synthase, PFAM = PF00285)' T
'6.2' 'gluconeogenesis / glyoxylate cycle.malate synthase' 'niben101scf02914_89913-94833' '(p17815|masy_ricco : 1020.0) Malate synthase, glyoxysomal (EC 2.3.3.9) - Ricinus communis (Castor bean) & (at5g03860 : 971.0) Encodes a protein with malate synthase activity.; malate synthase (MLS); FUNCTIONS IN: malate synthase activity; INVOLVED IN: glyoxylate cycle; CONTAINS InterPro DOMAIN/s: Malate synthase-like (InterPro:IPR011076), Malate synthase, conserved site (InterPro:IPR019830), Malate synthase A (InterPro:IPR006252), Malate synthase (InterPro:IPR001465). & (gnl|cdd|36475 : 814.0) no description available & (gnl|cdd|48433 : 807.0) no description available & (reliability: 1942.0) & (original description: Putative aceB, Description = Malate synthase, PFAM = PF01274)' T
'6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'nbv0.5scaffold87_874509-878293' '(p46488|mdhg_cucsa : 607.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 578.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 510.0) no description available & (gnl|cdd|58492 : 463.0) no description available & (reliability: 1156.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'nbv0.5scaffold1470_211625-219244' '(p46488|mdhg_cucsa : 579.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 574.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 518.0) no description available & (gnl|cdd|58492 : 477.0) no description available & (reliability: 1148.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'niben101scf01316_242716-250176' '(p46488|mdhg_cucsa : 583.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 576.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 519.0) no description available & (gnl|cdd|58492 : 478.0) no description available & (reliability: 1152.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'niben101scf04053_408903-414643' '(p46488|mdhg_cucsa : 612.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 583.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 513.0) no description available & (gnl|cdd|58492 : 465.0) no description available & (reliability: 1166.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'nbv0.3scaffold21562_16405-22123' '(at4g37870 : 921.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (q9slz0|pepck_maize : 915.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (gnl|cdd|29830 : 805.0) no description available & (reliability: 1842.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T
'6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben044scf00025815ctg000_1-6579' '(at4g37870 : 1056.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (p42066|pepck_cucsa : 1032.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Cucumis sativus (Cucumber) & (gnl|cdd|29830 : 895.0) no description available & (reliability: 2112.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T
'6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben101scf13577_205190-210908' '(at4g37870 : 1010.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (q9slz0|pepck_maize : 999.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (gnl|cdd|29830 : 894.0) no description available & (reliability: 2020.0) & (original description: Putative PCK1, Description = Phosphoenolpyruvate carboxykinase [ATP] 1, PFAM = PF01293)' T
'6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben101scf15153_208082-215131' '(at4g37870 : 1058.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (p42066|pepck_cucsa : 1033.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Cucumis sativus (Cucumber) & (gnl|cdd|29830 : 890.0) no description available & (reliability: 2116.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T
'6.5' 'gluconeogenesis / glyoxylate cycle.pyruvate dikinase' 'niben101scf00621_487311-498035' '(q42910|ppdk_mescr : 1609.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 1545.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82908 : 1465.0) no description available & (reliability: 3090.0) & (original description: Putative PPD, Description = Pyruvate, phosphate dikinase, chloroplastic, PFAM = PF01326;PF01326;PF00391;PF02896)' T
'6.9' 'gluconeogenesis / glyoxylate cycle.isocitrate lyase' 'nbv0.5scaffold3870_141704-148533' '(p17069|acea_goshi : 900.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Gossypium hirsutum (Upland cotton) & (at3g21720 : 853.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (gnl|cdd|84790 : 743.0) no description available & (gnl|cdd|36474 : 428.0) no description available & (reliability: 1706.0) & (original description: Putative aceA, Description = Isocitrate lyase, PFAM = PF00463)' T
'6.9' 'gluconeogenesis / glyoxylate cycle.isocitrate lyase' 'niben101scf07429_25495-29864' '(p17069|acea_goshi : 961.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Gossypium hirsutum (Upland cotton) & (at3g21720 : 912.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (gnl|cdd|84790 : 799.0) no description available & (gnl|cdd|36474 : 451.0) no description available & (reliability: 1824.0) & (original description: Putative aceA, Description = Isocitrate lyase, PFAM = PF00463)' T
'7' 'OPP' '' ''
'7.1' 'OPP.oxidative PP' '' ''
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben044scf00016106ctg003_51722-59768' '(q43793|g6pdc_tobac : 1199.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 958.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 741.0) no description available & (gnl|cdd|81714 : 552.0) no description available & (reliability: 1916.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf02007_593218-601127' '(q43793|g6pdc_tobac : 897.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 677.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 541.0) no description available & (gnl|cdd|81714 : 445.0) no description available & (reliability: 1354.0) & (original description: Putative g6pd, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF02781;PF00479)' T
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf03600_495598-503911' '(p37830|g6pd_soltu : 1018.0) Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (at5g40760 : 907.0) Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.; glucose-6-phosphate dehydrogenase 6 (G6PD6); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 5 (TAIR:AT3G27300.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35783 : 707.0) no description available & (gnl|cdd|30713 : 536.0) no description available & (reliability: 1814.0) & (original description: Putative G6PDH, Description = Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, PFAM = PF00479;PF02781)' T
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf05399_322922-332211' '(q43793|g6pdc_tobac : 1171.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 955.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 744.0) no description available & (gnl|cdd|81714 : 556.0) no description available & (reliability: 1910.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf09871_1112-9654' '(at1g09420 : 668.0) Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.; glucose-6-phosphate dehydrogenase 4 (G6PD4); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glucose metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1). & (gnl|cdd|35783 : 546.0) no description available & (o24357|g6pdc_spiol : 515.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Spinacia oleracea (Spinach) & (gnl|cdd|81714 : 438.0) no description available & (reliability: 1336.0) & (original description: Putative G6PD4, Description = Glucose-6-phosphate dehydrogenase 4, PFAM = PF02781;PF00479)' T
'7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf19612_211498-218918' '(q43839|g6pdc_soltu : 1070.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (at5g35790 : 900.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.; glucose-6-phosphate dehydrogenase 1 (G6PD1); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity, protein binding; INVOLVED IN: pentose-phosphate shunt, oxidative branch, glucose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35783 : 735.0) no description available & (gnl|cdd|81714 : 555.0) no description available & (reliability: 1800.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.3scaffold21121_3382-15912' '(at5g24400 : 288.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 249.0) no description available & (gnl|cdd|73166 : 216.0) no description available & (reliability: 576.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.3scaffold36481_5017-8687' '(at1g13700 : 337.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 288.0) no description available & (gnl|cdd|73166 : 248.0) no description available & (reliability: 674.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold2656_280914-288131' '(at5g24400 : 285.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 252.0) no description available & (gnl|cdd|73166 : 217.0) no description available & (reliability: 570.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold3520_80758-93755' '(at5g24400 : 303.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 268.0) no description available & (gnl|cdd|73166 : 225.0) no description available & (reliability: 606.0) & (original description: Putative 6PGL, Description = Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold7014_16444-22647' '(at1g13700 : 363.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 296.0) no description available & (gnl|cdd|73166 : 257.0) no description available & (reliability: 726.0) & (original description: Putative pgl, Description = Strongly similar to 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben044scf00023460ctg005_3524-5984' '(at5g24400 : 214.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 170.0) no description available & (gnl|cdd|73166 : 155.0) no description available & (reliability: 428.0) & (original description: Putative Pgls, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01045_85075-99619' '(at1g13700 : 301.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 250.0) no description available & (gnl|cdd|73166 : 215.0) no description available & (reliability: 602.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01524_124235-131714' '(at5g24400 : 346.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 307.0) no description available & (gnl|cdd|73166 : 259.0) no description available & (reliability: 692.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01550_296-3813' '(at5g24400 : 297.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 268.0) no description available & (gnl|cdd|73166 : 231.0) no description available & (reliability: 594.0) & (original description: Putative At3g49360, Description = Probable 6-phosphogluconolactonase 2, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf02151_531762-538249' '(at1g13700 : 377.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 292.0) no description available & (gnl|cdd|73166 : 249.0) no description available & (reliability: 754.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf05414_260972-266001' '(at1g13700 : 375.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 293.0) no description available & (gnl|cdd|73166 : 253.0) no description available & (reliability: 750.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf08446_74686-88761' '(at5g24400 : 352.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 302.0) no description available & (gnl|cdd|73166 : 261.0) no description available & (reliability: 704.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf00043_410869-414338' '(at3g02360 : 887.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 756.0) no description available & (gnl|cdd|82915 : 718.0) no description available & (reliability: 1774.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF00393;PF03446)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf01513_185158-189449' '(at3g25530 : 422.0) Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance.; glyoxylate reductase 1 (GLYR1); FUNCTIONS IN: 3-hydroxybutyrate dehydrogenase activity, phosphogluconate dehydrogenase (decarboxylating) activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35630 : 339.0) no description available & (gnl|cdd|32267 : 250.0) no description available & (reliability: 844.0) & (original description: Putative GLYR1, Description = Glyoxylate/succinic semialdehyde reductase 1, PFAM = PF03446;PF14833)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf01538_49825-52730' '(at1g71170 : 302.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, phosphogluconate dehydrogenase (decarboxylating) activity, catalytic activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G71180.1); Has 15315 Blast hits to 15291 proteins in 2047 species: Archae - 135; Bacteria - 9501; Metazoa - 307; Fungi - 346; Plants - 270; Viruses - 0; Other Eukaryotes - 4756 (source: NCBI BLink). & (gnl|cdd|35630 : 291.0) no description available & (gnl|cdd|32267 : 246.0) no description available & (reliability: 604.0) & (original description: Putative garR, Description = 2-hydroxy-3-oxopropionate reductase, PFAM = PF03446;PF14833)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf06562_11747-14799' '(at4g29120 : 421.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G71170.1); Has 17656 Blast hits to 17632 proteins in 2309 species: Archae - 156; Bacteria - 10896; Metazoa - 453; Fungi - 508; Plants - 334; Viruses - 3; Other Eukaryotes - 5306 (source: NCBI BLink). & (gnl|cdd|35630 : 328.0) no description available & (gnl|cdd|32267 : 279.0) no description available & (reliability: 842.0) & (original description: Putative garR, Description = 2-hydroxy-3-oxopropionate reductase, PFAM = PF14833;PF03446)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf08127_782575-786026' '(at3g02360 : 864.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 759.0) no description available & (gnl|cdd|82915 : 711.0) no description available & (reliability: 1728.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf10613_69277-72731' '(at3g02360 : 863.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 760.0) no description available & (gnl|cdd|82915 : 718.0) no description available & (reliability: 1726.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T
'7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf17140_53805-57289' '(at5g41670 : 827.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to fructose stimulus, response to cadmium ion, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G64190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37864 : 724.0) no description available & (gnl|cdd|82915 : 691.0) no description available & (reliability: 1654.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T
'7.1.1001' 'OPP.oxidative PP' 'gluconate-6-p' 'OPP.oxidative PP' M
'7.2' 'OPP.non-reductive PP' '' ''
'7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.3scaffold59808_1021-7340' '(q43848|tktc_soltu : 1284.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1196.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 755.0) no description available & (reliability: 2392.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02780;PF02779)' T
'7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.5scaffold3829_360668-368805' '(gnl|cdd|30371 : 849.0) no description available & (at3g60750 : 760.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 756.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 570.0) no description available & (reliability: 1520.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T
'7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.5scaffold6578_45542-52464' '(q43848|tktc_soltu : 1267.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1187.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1011.0) no description available & (gnl|cdd|35743 : 761.0) no description available & (reliability: 2374.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T
'7.2.1' 'OPP.non-reductive PP.transketolase' 'niben044scf00008412ctg007_1064-7782' '(q43848|tktc_soltu : 1246.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at3g60750 : 1181.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 756.0) no description available & (reliability: 2362.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02780;PF00456;PF02779)' T
'7.2.1' 'OPP.non-reductive PP.transketolase' 'niben044scf00013564ctg004_1467-8064' '(gnl|cdd|30371 : 834.0) no description available & (at3g60750 : 743.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 737.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 557.0) no description available & (reliability: 1486.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02779)' T
'7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf00986_96078-102093' '(at5g13420 : 633.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81124 : 483.0) no description available & (gnl|cdd|37983 : 304.0) no description available & (reliability: 1266.0) & (original description: Putative tal, Description = Transaldolase, PFAM = PF00923)' T
'7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf01818_671741-678026' '(at5g13420 : 631.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81124 : 485.0) no description available & (gnl|cdd|37983 : 308.0) no description available & (reliability: 1262.0) & (original description: Putative tal, Description = Transaldolase, PFAM = PF00923)' T
'7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf03167_166746-190442' '(at1g12230 : 535.0) Aldolase superfamily protein; FUNCTIONS IN: transaldolase activity, zinc ion binding; INVOLVED IN: carbohydrate metabolic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase (InterPro:IPR001585). & (gnl|cdd|29950 : 351.0) no description available & (gnl|cdd|37983 : 315.0) no description available & (reliability: 1070.0) & (original description: Putative At1g12230, Description = Transaldolase-like protein, PFAM = PF00923)' T
'7.2.3' 'OPP.non-reductive PP.ribulose-phosphate 3-epimerase' 'nbv0.5scaffold1116_242805-297596' '(q9se42|rpe1_orysa : 369.0) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) - Oryza sativa (Rice) & (at3g01850 : 357.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink). & (gnl|cdd|38321 : 332.0) no description available & (gnl|cdd|73366 : 295.0) no description available & (reliability: 714.0) & (original description: Putative rpe, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T
'7.2.3' 'OPP.non-reductive PP.ribulose-phosphate 3-epimerase' 'niben101scf01945_103497-120212' '(q9se42|rpe1_orysa : 367.0) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) - Oryza sativa (Rice) & (at3g01850 : 358.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink). & (gnl|cdd|38321 : 331.0) no description available & (gnl|cdd|73366 : 296.0) no description available & (reliability: 716.0) & (original description: Putative rpe, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'nbv0.5scaffold6203_45393-49010' '(at3g04790 : 326.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 263.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 652.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben044scf00024842ctg001_2488-5153' '(at1g71100 : 314.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 254.0) no description available & (gnl|cdd|73164 : 244.0) no description available & (reliability: 628.0) & (original description: Putative RPI1, Description = Probable ribose-5-phosphate isomerase 1, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf00271_686755-692433' '(at5g44520 : 289.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT3G04790.1); Has 2560 Blast hits to 2560 proteins in 1021 species: Archae - 184; Bacteria - 1763; Metazoa - 86; Fungi - 39; Plants - 144; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|38285 : 178.0) no description available & (gnl|cdd|73164 : 154.0) no description available & (reliability: 578.0) & (original description: Putative RPI4, Description = Probable ribose-5-phosphate isomerase 4, chloroplastic, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01534_78148-81005' '(at3g04790 : 323.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 264.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 646.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_311544-313965' '(at2g01290 : 130.0) Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.; ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38285 : 106.0) no description available & (gnl|cdd|87006 : 92.9) no description available & (reliability: 244.0) & (original description: Putative rpi, Description = Putative ribose-5-phosphate isomerase, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_311666-314451' '(at1g71100 : 344.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 269.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 688.0) & (original description: Putative RPI1, Description = Probable ribose-5-phosphate isomerase 1, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_312098-318449' '(at1g71100 : 155.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 121.0) no description available & (gnl|cdd|73164 : 115.0) no description available & (reliability: 310.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf02792_177429-183581' '(at3g04790 : 311.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 262.0) no description available & (gnl|cdd|73164 : 256.0) no description available & (reliability: 622.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026;PF06026)' T
'7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf09989_183843-186649' '(at2g01290 : 343.0) Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.; ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38285 : 277.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 676.0) & (original description: Putative RPI2, Description = Probable ribose-5-phosphate isomerase 2, PFAM = PF06026)' T
'7.3' 'OPP.electron transfer' 'niben044scf00022507ctg003_50622-53302' '(at2g27510 : 168.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 156.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 136.0) no description available & (reliability: 336.0) & (original description: Putative FD3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf01920_108519-110968' '(at2g27510 : 168.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 135.0) no description available & (reliability: 336.0) & (original description: Putative FD3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf02510_476379-478828' '(p27788|fer3_maize : 175.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 172.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 344.0) & (original description: Putative FDX3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf03282_778483-785547' '(o04397|fenr2_tobac : 730.0) Ferredoxin--NADP reductase, root-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g30510 : 592.0) Encodes a root-type ferredoxin:NADP(H) oxidoreductase.; root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36373 : 269.0) no description available & (gnl|cdd|30718 : 180.0) no description available & (reliability: 1184.0) & (original description: Putative fnr, Description = Ferredoxin--NADP reductase, PFAM = PF00175)' T
'7.3' 'OPP.electron transfer' 'niben101scf03377_690799-693251' '(at2g27510 : 164.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 128.0) no description available & (reliability: 328.0) & (original description: Putative fdx5, Description = Ferredoxin I, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf04134_224366-226818' '(p27788|fer3_maize : 180.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 174.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|79346 : 141.0) no description available & (reliability: 348.0) & (original description: Putative FDX3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf07284_375439-377888' '(at2g27510 : 172.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 171.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 142.0) no description available & (reliability: 344.0) & (original description: Putative petF, Description = Ferredoxin-1, PFAM = PF00111)' T
'7.3' 'OPP.electron transfer' 'niben101scf09005_27952-35001' '(o04397|fenr2_tobac : 700.0) Ferredoxin--NADP reductase, root-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g30510 : 574.0) Encodes a root-type ferredoxin:NADP(H) oxidoreductase.; root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36373 : 268.0) no description available & (gnl|cdd|30718 : 179.0) no description available & (reliability: 1148.0) & (original description: Putative fnr, Description = Ferredoxin--NADP reductase, PFAM = PF00175)' T
'7.3' 'OPP.electron transfer' 'niben101scf12738_76251-78700' '(at2g27510 : 167.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 128.0) no description available & (reliability: 334.0) & (original description: Putative fdxV, Description = Ferredoxin, PFAM = PF00111)' T
'8' 'TCA / org transformation' '' ''
'8.1' 'TCA / org transformation.TCA' '' ''
'8.1.1' 'TCA / org transformation.TCA.pyruvate DH' '' ''
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.3scaffold322_129476-137593' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 514.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1270.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.3scaffold48619_8256-15044' '(p52904|odpb_pea : 572.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (at5g50850 : 567.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (gnl|cdd|35744 : 549.0) no description available & (gnl|cdd|84022 : 529.0) no description available & (reliability: 1134.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.5scaffold300_425015-439189' '(at5g50850 : 582.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 580.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 548.0) no description available & (gnl|cdd|84022 : 530.0) no description available & (reliability: 1164.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.5scaffold6350_3150-14865' '(at5g50850 : 580.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 573.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 545.0) no description available & (gnl|cdd|84022 : 529.0) no description available & (reliability: 1160.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben044scf00019709ctg009_731-7523' '(at5g50850 : 578.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 577.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 553.0) no description available & (gnl|cdd|84022 : 537.0) no description available & (reliability: 1156.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf00161_26881-51582' '(at5g50850 : 588.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 584.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 549.0) no description available & (gnl|cdd|84022 : 527.0) no description available & (reliability: 1176.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf01577_176683-185556' '(p52903|odpa_soltu : 730.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (at1g59900 : 662.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (gnl|cdd|35446 : 560.0) no description available & (gnl|cdd|84944 : 383.0) no description available & (reliability: 1324.0) & (original description: Putative pda1, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf01617_2572-16411' '(at5g50850 : 577.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 571.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 553.0) no description available & (gnl|cdd|84022 : 534.0) no description available & (reliability: 1154.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf03106_161646-175427' '(p52903|odpa_soltu : 725.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (at1g59900 : 652.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (gnl|cdd|35446 : 563.0) no description available & (gnl|cdd|84944 : 388.0) no description available & (reliability: 1304.0) & (original description: Putative pda1, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf03886_218015-232989' '(at5g50850 : 572.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 570.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 536.0) no description available & (gnl|cdd|84022 : 518.0) no description available & (reliability: 1144.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf06914_108188-117412' '(at5g50850 : 592.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 586.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 558.0) no description available & (gnl|cdd|84022 : 534.0) no description available & (reliability: 1184.0) & (original description: Putative PDH2, Description = Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial, PFAM = PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf06933_227316-232709' '(at1g01090 : 656.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (gnl|cdd|35446 : 466.0) no description available & (gnl|cdd|48163 : 400.0) no description available & (p52903|odpa_soltu : 239.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1312.0) & (original description: Putative acoA, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf10148_10983-15848' '(at1g01090 : 666.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (gnl|cdd|35446 : 461.0) no description available & (gnl|cdd|31269 : 398.0) no description available & (p52903|odpa_soltu : 246.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1332.0) & (original description: Putative pdhA, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf10390_43569-56591' '(at1g30120 : 629.0) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.; pyruvate dehydrogenase E1 beta (PDH-E1 BETA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plastid pyruvate dehydrogenase complex, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT2G34590.1); Has 14229 Blast hits to 14219 proteins in 2378 species: Archae - 200; Bacteria - 8952; Metazoa - 481; Fungi - 222; Plants - 270; Viruses - 0; Other Eukaryotes - 4104 (source: NCBI BLink). & (gnl|cdd|79356 : 595.0) no description available & (gnl|cdd|35744 : 518.0) no description available & (q9mur4|odpb_mesvi : 419.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1258.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, PFAM = PF02780;PF02779)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf14210_124631-132800' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 515.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1270.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T
'8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf17044_145409-151645' '(at5g50850 : 580.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 573.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 543.0) no description available & (gnl|cdd|84022 : 531.0) no description available & (reliability: 1160.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.3scaffold4679_48954-67005' '(at3g52200 : 676.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 417.0) no description available & (gnl|cdd|84002 : 334.0) no description available & (reliability: 1352.0) & (original description: Putative ACEF, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00364;PF00364;PF00198)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.3scaffold19902_14681-22472' '(at1g34430 : 557.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 401.0) no description available & (gnl|cdd|84002 : 352.0) no description available & (reliability: 1114.0) & (original description: Putative pdhC, Description = E3 binding domain protein, PFAM = PF00198;PF00364;PF02817)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.5scaffold3135_202847-224225' '(at3g52200 : 671.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 419.0) no description available & (gnl|cdd|84002 : 334.0) no description available & (reliability: 1342.0) & (original description: Putative LTA3, Description = Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial, PFAM = PF00364;PF00364;PF02817;PF00198)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00014589ctg000_3770-11195' '(at1g34430 : 551.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 403.0) no description available & (gnl|cdd|84002 : 357.0) no description available & (reliability: 1102.0) & (original description: Putative aceF, Description = Branched-chain alpha-keto acid dehydrogenase subunit E2, PFAM = PF00364;PF00198;PF02817)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00018960ctg003_167-18855' '(at3g52200 : 675.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 416.0) no description available & (gnl|cdd|84002 : 332.0) no description available & (reliability: 1350.0) & (original description: Putative LTA3, Description = Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial, PFAM = PF00198;PF00364;PF00364;PF02817)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00047836ctg003_7220-15393' '(at3g13930 : 695.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 501.0) no description available & (gnl|cdd|84002 : 435.0) no description available & (reliability: 1390.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00364;PF00198)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf02413_432443-441614' '(at3g13930 : 685.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 502.0) no description available & (gnl|cdd|84002 : 439.0) no description available & (reliability: 1370.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF00198;PF02817;PF00364)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf03983_172256-181205' '(at3g13930 : 659.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 497.0) no description available & (gnl|cdd|84002 : 432.0) no description available & (reliability: 1318.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00198;PF00364)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf05697_151247-183160' '(at3g52200 : 523.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 425.0) no description available & (gnl|cdd|84002 : 343.0) no description available & (reliability: 1046.0) & (original description: Putative pdhC, Description = Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF00364;PF02817;PF00198)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf09170_85535-93354' '(at3g13930 : 682.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 498.0) no description available & (gnl|cdd|84002 : 436.0) no description available & (reliability: 1364.0) & (original description: Putative DLAT, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00198;PF00364)' T
'8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf15653_283303-291079' '(at1g34430 : 558.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 399.0) no description available & (gnl|cdd|84002 : 356.0) no description available & (reliability: 1116.0) & (original description: Putative aceF, Description = Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component, PFAM = PF00364;PF00198;PF02817)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'nbv0.5scaffold3496_146957-155074' '(at1g48030 : 808.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 792.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 731.0) no description available & (gnl|cdd|81930 : 577.0) no description available & (reliability: 1616.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF02852;PF07992)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben044scf00055337ctg002_1-8010' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 561.0) no description available & (gnl|cdd|81943 : 544.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1744.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf00332_548090-558842' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 566.0) no description available & (gnl|cdd|81943 : 548.0) no description available & (p31023|dldh_pea : 236.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1754.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf00466_488120-497396' '(at3g16950 : 583.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|36549 : 370.0) no description available & (gnl|cdd|81943 : 363.0) no description available & (p31023|dldh_pea : 143.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1166.0) & (original description: Putative dld2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01236_587457-595991' '(at1g48030 : 804.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 789.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 728.0) no description available & (gnl|cdd|81930 : 575.0) no description available & (reliability: 1608.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01334_677076-683143' '(at1g48030 : 795.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 788.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 728.0) no description available & (gnl|cdd|81930 : 575.0) no description available & (reliability: 1590.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01671_189578-196804' '(at1g48030 : 799.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 788.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 727.0) no description available & (gnl|cdd|81930 : 576.0) no description available & (reliability: 1598.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf04473_319942-329009' '(at4g16155 : 862.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 551.0) no description available & (gnl|cdd|81943 : 537.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1708.0) & (original description: Putative lpdA, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T
'8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf07691_2396-11872' '(at4g16155 : 840.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 558.0) no description available & (gnl|cdd|81943 : 541.0) no description available & (p31023|dldh_pea : 234.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1678.0) & (original description: Putative lpd2, Description = Lipoamide dehydrogenase, PFAM = PF07992;PF02852)' T
'8.1.2' 'TCA / org transformation.TCA.CS' 'niben044scf00017491ctg010_1695-11596' '(o80433|cisy_dauca : 807.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at2g44350 : 785.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|37828 : 596.0) no description available & (gnl|cdd|77261 : 496.0) no description available & (reliability: 1570.0) & (original description: Putative CS, Description = Citrate synthase, mitochondrial, PFAM = PF00285)' T
'8.1.2' 'TCA / org transformation.TCA.CS' 'niben101scf00557_237553-247328' '(o80433|cisy_dauca : 805.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at2g44350 : 785.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|37828 : 598.0) no description available & (gnl|cdd|77261 : 497.0) no description available & (reliability: 1570.0) & (original description: Putative CS, Description = Citrate synthase, mitochondrial, PFAM = PF00285)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.3scaffold1930_48989-61059' '(p49608|acoc_cucma : 1700.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1680.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1630.0) no description available & (gnl|cdd|82907 : 1421.0) no description available & (reliability: 3360.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00694;PF00330)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.3scaffold11889_7591-24167' '(p49608|acoc_cucma : 1680.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1660.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1605.0) no description available & (gnl|cdd|82907 : 1394.0) no description available & (reliability: 3320.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00330;PF00694)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.5scaffold5163_37025-51059' '(p49608|acoc_cucma : 1701.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1675.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1625.0) no description available & (gnl|cdd|82907 : 1421.0) no description available & (reliability: 3350.0) & (original description: Putative aco1, Description = Probable cytoplasmic aconitate hydratase, PFAM = PF00330;PF00694)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf00859_97684-109270' '(p49608|acoc_cucma : 1698.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1679.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1628.0) no description available & (gnl|cdd|82907 : 1419.0) no description available & (reliability: 3358.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00330;PF00694)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf01269_898736-908438' '(at2g05710 : 1612.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (q6yzx6|acoc_orysa : 1598.0) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (gnl|cdd|35673 : 1585.0) no description available & (gnl|cdd|82907 : 1409.0) no description available & (reliability: 3224.0) & (original description: Putative acnA, Description = Aconitate hydratase, PFAM = PF00330;PF00694)' T
'8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf02894_54600-71400' '(p49608|acoc_cucma : 1708.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1686.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1632.0) no description available & (gnl|cdd|82907 : 1424.0) no description available & (reliability: 3372.0) & (original description: Putative ACO1, Description = Aconitate hydratase 1, PFAM = PF00330;PF00694)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf00440_50107-57529' '(p50218|idhc_tobac : 805.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 772.0) no description available & (at1g65930 : 754.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 702.0) no description available & (reliability: 1508.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf00983_264546-270757' '(p50218|idhc_tobac : 853.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 764.0) no description available & (at1g65930 : 757.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 700.0) no description available & (reliability: 1514.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf05216_472524-478502' '(p50218|idhc_tobac : 853.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 766.0) no description available & (at1g65930 : 758.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 701.0) no description available & (reliability: 1516.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf06263_263216-274111' '(at4g35260 : 523.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 522.0) no description available & (gnl|cdd|30821 : 348.0) no description available & (p29696|leu3_soltu : 292.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1046.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf10132_111907-124880' '(gnl|cdd|36739 : 748.0) no description available & (at5g14590 : 741.0) Isocitrate/isopropylmalate dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, isocitrate dehydrogenase (NADP+) activity, magnesium ion binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction, isocitrate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: cytosolic NADP+-dependent isocitrate dehydrogenase (TAIR:AT1G65930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82596 : 707.0) no description available & (q40345|idhp_medsa : 674.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 1482.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T
'8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf17542_14040-22094' '(at4g35260 : 585.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 548.0) no description available & (gnl|cdd|30821 : 347.0) no description available & (p29696|leu3_soltu : 277.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1170.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.3scaffold18992_13803-22359' '(at5g55070 : 481.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 457.0) no description available & (gnl|cdd|81709 : 437.0) no description available & (reliability: 962.0) & (original description: Putative dlst, Description = 2-oxoglutarate dehydrogenase complex component E2, PFAM = PF00198;PF00364)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.3scaffold45244_7937-15830' '(at3g55410 : 1485.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1358.0) no description available & (gnl|cdd|82973 : 1125.0) no description available & (reliability: 2970.0) & (original description: Putative sucA, Description = 2-oxoglutarate dehydrogenase E1 component, PFAM = PF16870;PF02779;PF00676;PF16078)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.5scaffold3542_227908-235013' '(at5g55070 : 122.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 87.8) no description available & (reliability: 244.0) & (original description: Putative sucB, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00364)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben044scf00014187ctg007_13148-20093' '(gnl|cdd|35779 : 528.0) no description available & (at5g55070 : 515.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81709 : 498.0) no description available & (reliability: 1030.0) & (original description: Putative dlst, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00198;PF00364)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben044scf00032958ctg005_2352-10678' '(at3g55410 : 1907.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1590.0) no description available & (gnl|cdd|82973 : 1231.0) no description available & (reliability: 3814.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF16870;PF02779;PF00676;PF16078)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00311_309205-320696' '(gnl|cdd|35779 : 518.0) no description available & (at5g55070 : 492.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81709 : 490.0) no description available & (reliability: 984.0) & (original description: Putative ogd2, Description = 2-oxoglutarate dehydrogenase, E2 component, PFAM = PF00364;PF00198)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00435_488462-497034' '(at5g55070 : 590.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 541.0) no description available & (gnl|cdd|81709 : 485.0) no description available & (reliability: 1180.0) & (original description: Putative dlst, Description = 2-oxoglutarate dehydrogenase complex component E2, PFAM = PF00364;PF00198)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00449_464566-473177' '(at3g55410 : 1892.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1578.0) no description available & (gnl|cdd|82973 : 1223.0) no description available & (reliability: 3784.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF16870;PF00676;PF02779;PF16078)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf04477_344645-353201' '(at5g55070 : 535.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 493.0) no description available & (gnl|cdd|81709 : 463.0) no description available & (reliability: 1070.0) & (original description: Putative dlst, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00364;PF00198)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf07650_148658-156877' '(at3g55410 : 1889.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1580.0) no description available & (gnl|cdd|82973 : 1222.0) no description available & (reliability: 3778.0) & (original description: Putative sucA, Description = Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component, PFAM = PF00676;PF16870;PF02779;PF16078)' T
'8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf10015_225757-235380' '(at3g55410 : 1906.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1587.0) no description available & (gnl|cdd|82973 : 1236.0) no description available & (reliability: 3812.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF02779;PF16870;PF00676;PF16078)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'nbv0.5scaffold4295_20719-30955' '(at2g20420 : 669.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 659.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 513.0) no description available & (gnl|cdd|80721 : 461.0) no description available & (reliability: 1338.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF00549;PF08442)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben044scf00020686ctg017_2224-14471' '(gnl|cdd|36469 : 500.0) no description available & (at5g23250 : 487.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 482.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 466.0) no description available & (reliability: 974.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF02629;PF00549)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf00944_775882-789591' '(at2g20420 : 689.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 686.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 523.0) no description available & (gnl|cdd|80721 : 461.0) no description available & (reliability: 1378.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf01230_455269-467357' '(gnl|cdd|36469 : 508.0) no description available & (at5g23250 : 498.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 484.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 474.0) no description available & (reliability: 996.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF00549;PF02629)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf03595_977186-998863' '(gnl|cdd|36469 : 500.0) no description available & (at5g23250 : 484.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 476.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 468.0) no description available & (reliability: 968.0) & (original description: Putative scsA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha, PFAM = PF00549;PF02629)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf07722_114342-137687' '(gnl|cdd|36469 : 501.0) no description available & (at5g23250 : 486.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 476.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 470.0) no description available & (reliability: 972.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF00549;PF02629)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf13185_82520-102422' '(at2g20420 : 620.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 608.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 488.0) no description available & (gnl|cdd|80721 : 444.0) no description available & (reliability: 1240.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T
'8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf22702_12357-19373' '(at2g20420 : 701.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 698.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 529.0) no description available & (gnl|cdd|80721 : 465.0) no description available & (reliability: 1402.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'nbv0.3scaffold13816_36051-40652' '(at5g40650 : 448.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-2 (SDH2-2); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 (TAIR:AT3G27380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38259 : 419.0) no description available & (gnl|cdd|81798 : 372.0) no description available & (reliability: 896.0) & (original description: Putative sdh2, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben044scf00011859ctg010_1-1362' '(at5g09600 : 86.7) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 173.4) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf00752_70654-72956' '(at5g09600 : 87.0) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 174.0) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf03693_145301-154774' '(at5g66760 : 1149.0) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.; succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 1136.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (gnl|cdd|82801 : 1092.0) no description available & (gnl|cdd|37614 : 1002.0) no description available & (reliability: 2298.0) & (original description: Putative sdh1, Description = Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, PFAM = PF02910;PF00890)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf06569_210917-215653' '(at5g65165 : 425.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through dessication, are abundant in dry seeds, and markedly decline during germination.; succinate dehydrogenase 2-3 (SDH2-3); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 8948 Blast hits to 8944 proteins in 2136 species: Archae - 163; Bacteria - 5307; Metazoa - 268; Fungi - 171; Plants - 148; Viruses - 0; Other Eukaryotes - 2891 (source: NCBI BLink). & (gnl|cdd|38259 : 358.0) no description available & (gnl|cdd|81798 : 346.0) no description available & (reliability: 850.0) & (original description: Putative sdh, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf07576_160039-166155' '(at5g40650 : 444.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-2 (SDH2-2); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 (TAIR:AT3G27380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38259 : 419.0) no description available & (gnl|cdd|81798 : 369.0) no description available & (reliability: 888.0) & (original description: Putative SdhB, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T
'8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf14338_253665-263837' '(at5g66760 : 1132.0) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.; succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 1124.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (gnl|cdd|82801 : 1082.0) no description available & (gnl|cdd|37614 : 990.0) no description available & (reliability: 2264.0) & (original description: Putative sdh1, Description = Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, PFAM = PF02910;PF00890)' T
'8.1.8' 'TCA / org transformation.TCA.fumarase' 'niben044scf00014535ctg006_27091-30485' '(gnl|cdd|36531 : 831.0) no description available & (at5g50950 : 825.0) Encodes a fumarase enzyme initially shown to be in the mitochondria through proteomic studies but later shown to be present in the cytosol using an RFP fluorescent protein tag. It appears to be important for the accumulation of fumarate from malate in leaves in the light, and helps to promote nitrogen assimilation under high nitrogen conditions. It does not appear to be necessary for lipid metabolism and seedling growth.; FUMARASE 2 (FUM2); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: nitrate assimilation, response to salt stress, fumarate metabolic process; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: male gametophyte, guard cell, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: fumarase 1 (TAIR:AT2G47510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80687 : 790.0) no description available & (reliability: 1650.0) & (original description: Putative FUM2, Description = Fumarate hydratase 2, chloroplastic, PFAM = PF00206;PF10415)' T
'8.1.8' 'TCA / org transformation.TCA.fumarase' 'niben101scf00872_20151-30810' '(at2g47510 : 838.0) Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.; fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: response to oxidative stress, response to salt stress, pollen tube development; LOCATED IN: mitochondrion; EXPRESSED IN: cotyledon, male gametophyte, guard cell, root; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: FUMARASE 2 (TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins in 2822 species: Archae - 389; Bacteria - 12991; Metazoa - 306; Fungi - 295; Plants - 106; Viruses - 0; Other Eukaryotes - 5649 (source: NCBI BLink). & (gnl|cdd|36531 : 837.0) no description available & (gnl|cdd|80687 : 796.0) no description available & (reliability: 1676.0) & (original description: Putative FUM1, Description = Fumarate hydratase 1, mitochondrial, PFAM = PF00206;PF10415)' T
'8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben044scf00015957ctg006_2773-10105' '(at1g53240 : 530.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 529.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 506.0) no description available & (gnl|cdd|58492 : 471.0) no description available & (reliability: 1060.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben101scf00398_286392-292134' '(at1g53240 : 537.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 530.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 509.0) no description available & (gnl|cdd|58492 : 476.0) no description available & (reliability: 1074.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben101scf08142_36898-43517' '(at3g15020 : 545.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (p83373|mdhm_fraan : 539.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 509.0) no description available & (gnl|cdd|58492 : 475.0) no description available & (reliability: 1090.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.1.99' 'TCA / org transformation.TCA.misc' '' ''
'8.1.1001' 'TCA / org transformation.TCA' 'citrate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1002' 'TCA / org transformation.TCA' 'aconitate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1003' 'TCA / org transformation.TCA' 'isocitrate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1004' 'TCA / org transformation.TCA' '2-oxoglutarate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation; N-metabolism.ammonia metabolism; amino acid metabolism' M
'8.1.1005' 'TCA / org transformation.TCA' 'succinate' 'amino acid synthesis.lysine; secondary metabolism; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1006' 'TCA / org transformation.TCA' 'fumarate' 'amino acid synthesis.arginine; amino acid degradation.tyrosine; amino acid synthesis.asparagines; amino acid synthesis.aspartate; nucleotide metabolism.synthesis; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1007' 'TCA / org transformation.TCA' 'malate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'8.1.1008' 'TCA / org transformation.TCA' 'oxaloacetate' 'TCA cycle' M
'8.2' 'TCA / org transformation.other organic acid transformations' '' ''
'8.2.3' 'TCA / org transformation.other organic acid transformatons.aconitase' '' ''
'8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf01789_231873-242068' '(p29696|leu3_soltu : 663.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (at5g03290 : 608.0) Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase V (IDH-V); FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity, zinc ion binding, ATP binding; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36004 : 571.0) no description available & (gnl|cdd|30821 : 408.0) no description available & (reliability: 1216.0) & (original description: Putative glu2, Description = Isocitrate dehydrogenase [NAD] subunit, mitochondrial, PFAM = PF00180)' T
'8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf06263_263216-274111' '(at4g35260 : 523.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 522.0) no description available & (gnl|cdd|30821 : 348.0) no description available & (p29696|leu3_soltu : 292.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1024.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T
'8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf17542_14040-22094' '(at4g35260 : 585.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 548.0) no description available & (gnl|cdd|30821 : 347.0) no description available & (p29696|leu3_soltu : 277.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1134.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'nbv0.5scaffold4559_148919-157802' '(o48902|mdhp_medsa : 715.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 678.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 654.0) no description available & (gnl|cdd|36709 : 441.0) no description available & (reliability: 1356.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00022324ctg001_1-5813' '(o48902|mdhp_medsa : 764.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 699.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 657.0) no description available & (gnl|cdd|36709 : 437.0) no description available & (reliability: 1398.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00030192ctg001_7581-10988' '(at3g47520 : 540.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 488.0) no description available & (gnl|cdd|58492 : 466.0) no description available & (p37228|mdhg_soybn : 394.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1080.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00057295ctg000_1713-8044' '(o48902|mdhp_medsa : 760.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 702.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 658.0) no description available & (gnl|cdd|36709 : 437.0) no description available & (reliability: 1404.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf00063_1302569-1313658' '(at3g47520 : 550.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 495.0) no description available & (gnl|cdd|58492 : 473.0) no description available & (p37228|mdhg_soybn : 397.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1100.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf00878_396446-401335' '(q08062|mdhc_maize : 567.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Zea mays (Maize) & (at5g43330 : 547.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58491 : 540.0) no description available & (gnl|cdd|36709 : 531.0) no description available & (reliability: 1094.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf01922_1037928-1041154' '(at3g47520 : 513.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 470.0) no description available & (gnl|cdd|58492 : 443.0) no description available & (p37228|mdhg_soybn : 385.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1026.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf02819_768488-777398' '(o48902|mdhp_medsa : 690.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 670.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 650.0) no description available & (gnl|cdd|36709 : 438.0) no description available & (reliability: 1340.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf03450_31475-38249' '(o48905|mdhc_medsa : 600.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Medicago sativa (Alfalfa) & (at1g04410 : 593.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36709 : 547.0) no description available & (gnl|cdd|58491 : 547.0) no description available & (reliability: 1186.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf04462_102975-109075' '(q08062|mdhc_maize : 566.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Zea mays (Maize) & (at5g43330 : 548.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58491 : 542.0) no description available & (gnl|cdd|36709 : 533.0) no description available & (reliability: 1096.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf06245_143911-150119' '(o48902|mdhp_medsa : 691.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 637.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 627.0) no description available & (gnl|cdd|36709 : 409.0) no description available & (reliability: 1274.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T
'8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf11646_240656-243891' '(at3g47520 : 526.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 480.0) no description available & (gnl|cdd|58492 : 448.0) no description available & (p37228|mdhg_soybn : 389.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1052.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'nbv0.5scaffold438_499412-538004' '(p37221|maom_soltu : 517.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 458.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 344.0) no description available & (gnl|cdd|86489 : 292.0) no description available & (reliability: 916.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'nbv0.5scaffold888_181348-243898' '(p37221|maom_soltu : 1099.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 971.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 763.0) no description available & (gnl|cdd|30629 : 315.0) no description available & (reliability: 1942.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben044scf00000009ctg010_9243-13876' '(p36444|maoc_flapr : 706.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 686.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 615.0) no description available & (gnl|cdd|84742 : 294.0) no description available & (reliability: 1372.0) & (original description: Putative ME1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben044scf00033312ctg001_1-3559' '(gnl|cdd|36471 : 300.0) no description available & (p51615|maox_vitvi : 298.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at2g19900 : 268.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.; NADP-malic enzyme 1 (NADP-ME1); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: embryo, sperm cell, root, stamen, seed; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9392 Blast hits to 9373 proteins in 2414 species: Archae - 143; Bacteria - 6244; Metazoa - 609; Fungi - 220; Plants - 469; Viruses - 0; Other Eukaryotes - 1707 (source: NCBI BLink). & (gnl|cdd|86489 : 216.0) no description available & (reliability: 536.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf00745_399168-409543' '(p51615|maox_vitvi : 994.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 972.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 911.0) no description available & (gnl|cdd|30629 : 342.0) no description available & (reliability: 1944.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01374_1046570-1054872' '(p51615|maox_vitvi : 876.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 822.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 790.0) no description available & (gnl|cdd|84742 : 294.0) no description available & (reliability: 1644.0) & (original description: Putative MODA, Description = NADP-dependent malic enzyme, chloroplastic, PFAM = PF03949;PF03949;PF00390)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01681_1390279-1421172' '(p37221|maom_soltu : 518.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 461.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 342.0) no description available & (gnl|cdd|86489 : 292.0) no description available & (reliability: 922.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01881_124942-194781' '(p37221|maom_soltu : 1075.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 968.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 765.0) no description available & (gnl|cdd|30629 : 316.0) no description available & (reliability: 1936.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf02217_776411-785077' '(p51615|maox_vitvi : 1021.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 1001.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 912.0) no description available & (gnl|cdd|30629 : 341.0) no description available & (reliability: 2002.0) & (original description: Putative MOD1, Description = NADP-dependent malic enzyme, PFAM = PF03949;PF00390)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf02497_161767-176096' '(p37225|maon_soltu : 1045.0) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at4g00570 : 879.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 2 (NAD-ME2); FUNCTIONS IN: in 7 functions; INVOLVED IN: malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 1 (TAIR:AT2G13560.1); Has 9343 Blast hits to 9326 proteins in 2439 species: Archae - 143; Bacteria - 6323; Metazoa - 607; Fungi - 223; Plants - 463; Viruses - 0; Other Eukaryotes - 1584 (source: NCBI BLink). & (gnl|cdd|36471 : 746.0) no description available & (gnl|cdd|30629 : 304.0) no description available & (reliability: 1758.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF03949;PF00390)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf03942_245742-254507' '(p36444|maoc_flapr : 1026.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 965.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 907.0) no description available & (gnl|cdd|86489 : 334.0) no description available & (reliability: 1930.0) & (original description: Putative me2, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf05089_20865-30330' '(p36444|maoc_flapr : 1030.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 966.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 908.0) no description available & (gnl|cdd|86489 : 337.0) no description available & (reliability: 1932.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF03949;PF00390)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf07516_10689-21756' '(p37225|maon_soltu : 1053.0) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at4g00570 : 885.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 2 (NAD-ME2); FUNCTIONS IN: in 7 functions; INVOLVED IN: malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 1 (TAIR:AT2G13560.1); Has 9343 Blast hits to 9326 proteins in 2439 species: Archae - 143; Bacteria - 6323; Metazoa - 607; Fungi - 223; Plants - 463; Viruses - 0; Other Eukaryotes - 1584 (source: NCBI BLink). & (gnl|cdd|36471 : 750.0) no description available & (gnl|cdd|30629 : 302.0) no description available & (reliability: 1770.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf10055_774088-780507' '(p51615|maox_vitvi : 1040.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at5g25880 : 969.0) The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.; NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36471 : 896.0) no description available & (gnl|cdd|30629 : 339.0) no description available & (reliability: 1938.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'nbv0.3scaffold9033_6049-12462' '(at5g49460 : 1012.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 742.0) no description available & (gnl|cdd|30423 : 140.0) no description available & (reliability: 2024.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'nbv0.3scaffold80329_183-6931' '(at1g09430 : 717.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (gnl|cdd|36468 : 482.0) no description available & (gnl|cdd|30394 : 159.0) no description available & (reliability: 1434.0) & (original description: Putative aclA, Description = ATP-citrate synthase, PFAM = PF08442;PF16114)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00022234ctg007_289-7048' '(at5g49460 : 1112.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 821.0) no description available & (gnl|cdd|30423 : 191.0) no description available & (q6zl94|suca_orysa : 100.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 2224.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00023393ctg006_1-5930' '(at1g09430 : 769.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (gnl|cdd|36468 : 481.0) no description available & (gnl|cdd|30394 : 162.0) no description available & (reliability: 1538.0) & (original description: Putative aclA, Description = ATP-citrate synthase, PFAM = PF16114;PF08442)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00043817ctg001_159-7122' '(at5g49460 : 1009.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 741.0) no description available & (gnl|cdd|30423 : 136.0) no description available & (reliability: 2018.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf00231_688446-694904' '(at1g60810 : 755.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 480.0) no description available & (gnl|cdd|30394 : 166.0) no description available & (reliability: 1510.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF16114;PF08442)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf01934_536509-543464' '(at3g06650 : 1009.0) One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase B-1 (ACLB-1); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: citrate lyase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP citrate lyase subunit B 2 (TAIR:AT5G49460.1); Has 8069 Blast hits to 8065 proteins in 2074 species: Archae - 271; Bacteria - 4029; Metazoa - 557; Fungi - 289; Plants - 162; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|36468 : 743.0) no description available & (gnl|cdd|30423 : 137.0) no description available & (reliability: 2018.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf03045_749005-755248' '(at1g60810 : 761.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 486.0) no description available & (gnl|cdd|30394 : 168.0) no description available & (reliability: 1522.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF08442;PF16114)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf03905_143316-150067' '(at5g49460 : 1116.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 828.0) no description available & (gnl|cdd|30423 : 187.0) no description available & (q6zl94|suca_orysa : 97.1) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 2232.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00549;PF00285)' T
'8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf04287_642259-648215' '(at1g60810 : 761.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 479.0) no description available & (gnl|cdd|30394 : 172.0) no description available & (reliability: 1522.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF08442;PF16114)' T
'8.2.99' 'TCA / org transformation.other organic acid transformatons.misc' 'niben101scf10735_749-7048' '(at1g79440 : 715.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (gnl|cdd|37662 : 663.0) no description available & (gnl|cdd|78410 : 560.0) no description available & (o24174|badh_orysa : 311.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1430.0) & (original description: Putative davD, Description = Succinate-semialdehyde dehydrogenase, PFAM = PF00171)' T
'8.2.99' 'TCA / org transformation.other organic acid transformatons.misc' 'niben101scf22954_49659-61159' '(at1g79440 : 769.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (gnl|cdd|37662 : 712.0) no description available & (gnl|cdd|78410 : 602.0) no description available & (o24174|badh_orysa : 335.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1538.0) & (original description: Putative davD, Description = Succinate-semialdehyde dehydrogenase, PFAM = PF00171)' T
'8.2.1001' 'TCA / org transformation.Various' '2-methylcitrate' 'Propanoate metabolism in bacteria' M
'8.2.1002' 'TCA / org transformation.Various' '2-oxogluconate' '' M
'8.2.1003' 'TCA / org transformation.Various' 'oxalate' '' M
'8.2.1004' 'TCA / org transformation.Various' 'suberate' 'Also called cork acid, octanedioic acid' M
'8.2.1005' 'TCA / org transformation.Various' 'itaconate' '' M
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.3scaffold2236_46289-50029' '(at1g08080 : 301.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 260.0) no description available & (gnl|cdd|35603 : 192.0) no description available & (reliability: 602.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.3scaffold3015_56075-67054' '(at1g08080 : 251.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 228.0) no description available & (gnl|cdd|35603 : 169.0) no description available & (reliability: 502.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold1059_118831-122061' '(at4g20990 : 181.0) alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|28766 : 122.0) no description available & (gnl|cdd|35603 : 80.1) no description available & (reliability: 362.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194;PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold1607_66751-70098' '(at1g08080 : 231.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 199.0) no description available & (gnl|cdd|35603 : 155.0) no description available & (reliability: 462.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold2643_62310-68109' '(gnl|cdd|28766 : 211.0) no description available & (at1g08080 : 193.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|35603 : 174.0) no description available & (reliability: 386.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194;PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold4152_202694-206594' '(p27141|cahc_tobac : 375.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 344.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|48223 : 257.0) no description available & (gnl|cdd|36791 : 247.0) no description available & (reliability: 688.0) & (original description: Putative ca1, Description = Carbonate dehydratase, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf00259_118450-123518' '(at4g20990 : 269.0) alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|28766 : 252.0) no description available & (gnl|cdd|35603 : 176.0) no description available & (reliability: 538.0) & (original description: Putative ACA4, Description = Alpha carbonic anhydrase 4, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf01155_127239-139869' '(p27141|cahc_tobac : 363.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at1g70410 : 354.0) Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.; beta carbonic anhydrase 4 (BCA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, carbon utilization, regulation of stomatal movement; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 3 (TAIR:AT1G23730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36791 : 293.0) no description available & (gnl|cdd|48223 : 270.0) no description available & (reliability: 708.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf01890_416454-420175' '(at1g08080 : 312.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 266.0) no description available & (gnl|cdd|35603 : 193.0) no description available & (reliability: 624.0) & (original description: Putative ACA7, Description = Alpha carbonic anhydrase 7, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf02502_759840-770628' '(at1g08080 : 288.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 253.0) no description available & (gnl|cdd|35603 : 200.0) no description available & (reliability: 576.0) & (original description: Putative ACA7, Description = Alpha carbonic anhydrase 7, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf02502_765801-768338' '(at1g08080 : 113.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 111.0) no description available & (reliability: 226.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03302_253553-258196' '(at1g08080 : 333.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 256.0) no description available & (gnl|cdd|35603 : 193.0) no description available & (reliability: 666.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03302_254849-257947' '(at1g08080 : 208.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 185.0) no description available & (gnl|cdd|35603 : 137.0) no description available & (reliability: 416.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03766_892610-896821' '(p27141|cahc_tobac : 368.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 334.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|48223 : 243.0) no description available & (gnl|cdd|36791 : 234.0) no description available & (reliability: 668.0) & (original description: Putative ca3, Description = Carbonic anhydrase, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf06349_65184-71357' '(p27141|cahc_tobac : 553.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 404.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|36791 : 297.0) no description available & (gnl|cdd|48223 : 265.0) no description available & (reliability: 808.0) & (original description: Putative ca1, Description = Carbonate dehydratase, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf06999_246910-253151' '(gnl|cdd|28766 : 245.0) no description available & (at1g08080 : 229.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|35603 : 190.0) no description available & (reliability: 458.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf08637_179404-186772' '(p27141|cahc_tobac : 360.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 357.0) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (gnl|cdd|36791 : 294.0) no description available & (gnl|cdd|48223 : 269.0) no description available & (reliability: 714.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf09253_99291-106993' '(p27141|cahc_tobac : 555.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 403.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|36791 : 297.0) no description available & (gnl|cdd|48223 : 263.0) no description available & (reliability: 806.0) & (original description: Putative BCA1, Description = Beta carbonic anhydrase 1, chloroplastic, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf13995_135569-142099' '(at4g33580 : 269.0) beta carbonic anhydrase 5 (BCA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 6 (TAIR:AT1G58180.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48223 : 258.0) no description available & (gnl|cdd|36791 : 243.0) no description available & (p17067|cahc_pea : 194.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] - Pisum sativum (Garden pea) & (reliability: 538.0) & (original description: Putative BCA5, Description = Beta carbonic anhydrase 5, chloroplastic, PFAM = PF00484)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf14591_194410-212027' '(at3g52720 : 268.0) Encodes a putative alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast.; alpha carbonic anhydrase 1 (ACA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 2 (TAIR:AT2G28210.1); Has 3162 Blast hits to 3153 proteins in 518 species: Archae - 0; Bacteria - 691; Metazoa - 1922; Fungi - 83; Plants - 314; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|28766 : 237.0) no description available & (gnl|cdd|35603 : 174.0) no description available & (reliability: 536.0) & (original description: Putative ACA1, Description = Alpha carbonic anhydrase 1, chloroplastic, PFAM = PF00194)' T
'8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf16378_266262-270017' '(p27141|cahc_tobac : 374.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 343.0) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (gnl|cdd|48223 : 258.0) no description available & (gnl|cdd|36791 : 250.0) no description available & (reliability: 686.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T
'9' 'mitochondrial electron transport / ATP synthesis' 'nbv0.3scaffold39937_11800-17424' '(at4g34700 : 179.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 116.0) no description available & (reliability: 358.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T
'9' 'mitochondrial electron transport / ATP synthesis' 'nbv0.5scaffold3558_2532-8365' '(at4g34700 : 178.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 356.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T
'9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf00466_122136-128320' '(at4g34700 : 179.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 358.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T
'9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf01025_143796-149629' '(at4g34700 : 158.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 106.0) no description available & (reliability: 316.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = )' T
'9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf01852_517244-521893' '(at4g34700 : 164.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 113.0) no description available & (reliability: 328.0) & (original description: Putative CIB22, Description = NADH ubiquinone oxidoreductase B22-like subunit, PFAM = PF05347)' T
'9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf04664_20837-24790' '(at4g34700 : 169.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 338.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T
'9.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH' '' ''
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.3scaffold24653_17423-19635' '(at1g14450 : 96.3) NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT2G02510.1); Has 62 Blast hits to 62 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative At1g14450, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B, PFAM = PF08122)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.3scaffold33175_2674-4997' '(q01300|nu1m_pethy : 128.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 124.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|84559 : 99.5) no description available & (gnl|cdd|39967 : 99.0) no description available & (reliability: 248.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.5scaffold3132_77005-246554' '(q8h9d2|nqr_soltu : 172.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 131.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 98.6) no description available & (gnl|cdd|86303 : 85.0) no description available & (reliability: 262.0) & (original description: Putative BnaAnng24670D, Description = BnaAnng24670D protein, PFAM = PF03358)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.5scaffold4943_154995-160570' '(q01300|nu1m_pethy : 191.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 183.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 152.0) no description available & (gnl|cdd|84559 : 148.0) no description available & (reliability: 366.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben044scf00009753ctg015_1-620' '(atmg00650 : 123.0) Encodes NADH dehydrogenase subunit 4L.; NADH dehydrogenase subunit 4L (NAD4L); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (p26851|nu4lm_marpo : 95.9) NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39868 : 94.5) no description available & (reliability: 246.0) & (original description: Putative ND4L, Description = NADH-ubiquinone oxidoreductase chain 4L, PFAM = PF00420)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00150_417909-424127' '(at3g12260 : 184.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 125.0) no description available & (reliability: 368.0) & (original description: Putative At3g12260, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00438_257257-259556' '(atmg00650 : 111.0) Encodes NADH dehydrogenase subunit 4L.; NADH dehydrogenase subunit 4L (NAD4L); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (gnl|cdd|39868 : 96.8) no description available & (p26851|nu4lm_marpo : 89.0) NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L) - Marchantia polymorpha (Liverwort) & (reliability: 222.0) & (original description: Putative ND4L, Description = NADH-ubiquinone oxidoreductase chain 4L, PFAM = PF00420)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00571_497684-505642' '(at3g12260 : 183.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 127.0) no description available & (reliability: 366.0) & (original description: Putative glysoja_007403, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00705_126848-128366' '(at1g14450 : 96.3) NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT2G02510.1); Has 62 Blast hits to 62 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative At1g14450, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B, PFAM = PF08122)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00854_343496-800092' '(q01300|nu1m_pethy : 170.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 162.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 140.0) no description available & (gnl|cdd|84559 : 137.0) no description available & (reliability: 324.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146;PF00146)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01102_141602-155653' '(q8h9d2|nqr_soltu : 231.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 209.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 141.0) no description available & (gnl|cdd|86303 : 83.1) no description available & (reliability: 418.0) & (original description: Putative NQR, Description = NADPH:quinone oxidoreductase-like protein, PFAM = PF03358)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01102_206710-209157' '(q8h9d2|nqr_soltu : 174.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 126.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 94.0) no description available & (gnl|cdd|86303 : 83.1) no description available & (reliability: 252.0) & (original description: Putative BnaAnng24670D, Description = BnaAnng24670D protein, PFAM = PF03358)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01421_66906-74346' '(at3g12260 : 181.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 127.0) no description available & (reliability: 362.0) & (original description: Putative At3g12260, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01954_18936-22032' '(q8h9d2|nqr_soltu : 295.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 262.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 192.0) no description available & (gnl|cdd|86303 : 133.0) no description available & (reliability: 524.0) & (original description: Putative chrR, Description = NADPH-dependent FMN reductase, PFAM = PF03358)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01954_86832-91433' '(q8h9d2|nqr_soltu : 303.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 270.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 212.0) no description available & (gnl|cdd|86303 : 142.0) no description available & (reliability: 540.0) & (original description: Putative azr, Description = NADPH-dependent FMN reductase, PFAM = PF03358)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf02438_250926-261695' '(gnl|cdd|38300 : 473.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 308.0) no description available & (reliability: 840.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf04114_63184-68780' '(q01300|nu1m_pethy : 141.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 134.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 107.0) no description available & (gnl|cdd|84559 : 107.0) no description available & (reliability: 268.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf04775_68798-73917' '(gnl|cdd|38300 : 474.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 313.0) no description available & (reliability: 840.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf11424_22436-26799' '(gnl|cdd|38300 : 464.0) no description available & (at4g28510 : 416.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 312.0) no description available & (reliability: 832.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T
'9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf30554_7028-12641' '(q01300|nu1m_pethy : 192.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 184.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 153.0) no description available & (gnl|cdd|84559 : 149.0) no description available & (reliability: 368.0) & (original description: Putative orf108c, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold38867_13073-19637' '(at3g48680 : 384.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|31007 : 146.0) no description available & (reliability: 768.0) & (original description: Putative GAMMACAL2, Description = Gamma carbonic anhydrase-like 2, mitochondrial, PFAM = )' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold43227_5120-7530' '(at5g63510 : 181.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase like 1 (GAMMA CAL1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase-like 2 (TAIR:AT3G48680.1). & (reliability: 362.0) & (original description: Putative At3g48680, Description = AtCAL1, PFAM = )' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold71631_703-6956' '(at1g47260 : 337.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 2 (GAMMA CA2); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: response to salt stress, regulation of oxygen and reactive oxygen species metabolic process, anther dehiscence, photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 1 (TAIR:AT1G19580.1); Has 12062 Blast hits to 12006 proteins in 2273 species: Archae - 302; Bacteria - 8576; Metazoa - 53; Fungi - 108; Plants - 233; Viruses - 0; Other Eukaryotes - 2790 (source: NCBI BLink). & (gnl|cdd|31007 : 151.0) no description available & (reliability: 674.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.5scaffold268_587196-594343' '(at1g19580 : 442.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 198.0) no description available & (reliability: 884.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.5scaffold3042_273325-283368' '(at1g19580 : 457.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 204.0) no description available & (reliability: 914.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben044scf00023219ctg000_1075-9943' '(at1g19580 : 457.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 204.0) no description available & (reliability: 914.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf00338_613496-620823' '(at3g48680 : 386.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|31007 : 143.0) no description available & (reliability: 772.0) & (original description: Putative GAMMACAL2, Description = Gamma carbonic anhydrase-like 2, mitochondrial, PFAM = )' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf00606_244733-255826' '(at1g19580 : 422.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 174.0) no description available & (reliability: 844.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf04113_588555-595930' '(at1g19580 : 444.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 196.0) no description available & (reliability: 888.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T
'9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf08194_272320-281497' '(at1g19580 : 456.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 203.0) no description available & (reliability: 912.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold9577_1-7692' '(at3g03070 : 159.0) NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: Zinc finger, CHCC-type (InterPro:IPR019401), NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria (InterPro:IPR016668); Has 288 Blast hits to 288 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 142; Fungi - 84; Plants - 40; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38666 : 123.0) no description available & (reliability: 318.0) & (original description: Putative nuoS6, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, PFAM = PF10276)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold19212_33178-34603' '(q43644|ndus1_soltu : 277.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 215.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 194.0) no description available & (gnl|cdd|82828 : 164.0) no description available & (reliability: 430.0) & (original description: Putative nqo, Description = NADH-quinone oxidoreductase, PFAM = PF00384;PF09326)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold33175_2674-4997' '(q01300|nu1m_pethy : 128.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 124.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|84559 : 99.5) no description available & (gnl|cdd|39967 : 99.0) no description available & (reliability: 248.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold42522_4921-8538' '(atmg01320 : 246.0) encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.; NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1). & (p93401|nu2m_oenbe : 222.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 85.2) no description available & (reliability: 492.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold53244_12599-14035' '(q36450|ndus2_nicsy : 167.0) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7) - Nicotiana sylvestris (Wood tobacco) & (atmg00510 : 160.0) NADH dehydrogenase subunit 7; NADH dehydrogenase subunit 7 (NAD7); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction, cellular respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: leaf whorl, guard cell, cultured cell, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NADH dehydrogenase I, D subunit (InterPro:IPR010219), NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase subunit H (TAIR:ATCG01110.1). & (gnl|cdd|38081 : 143.0) no description available & (gnl|cdd|81837 : 126.0) no description available & (reliability: 320.0) & (original description: Putative nad7, Description = NADH dehydrogenase subunit 7, PFAM = PF00346)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold70790_2765-5274' '(atmg00580 : 181.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 180.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 165.0) no description available & (gnl|cdd|81762 : 159.0) no description available & (reliability: 362.0) & (original description: Putative nad4, Description = NADH-ubiquinone oxidoreductase chain 4, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold87752_770-5798' '(q43844|ndus7_soltu : 313.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 302.0) no description available & (at5g11770 : 283.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 282.0) no description available & (reliability: 566.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold690_42270-184700' '(q36450|ndus2_nicsy : 177.0) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7) - Nicotiana sylvestris (Wood tobacco) & (atmg00510 : 171.0) NADH dehydrogenase subunit 7; NADH dehydrogenase subunit 7 (NAD7); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction, cellular respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: leaf whorl, guard cell, cultured cell, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NADH dehydrogenase I, D subunit (InterPro:IPR010219), NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase subunit H (TAIR:ATCG01110.1). & (gnl|cdd|38081 : 152.0) no description available & (gnl|cdd|81837 : 137.0) no description available & (reliability: 342.0) & (original description: Putative orfI, Description = OrfI protein, PFAM = PF00346)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold825_76577-82801' '(at5g67590 : 135.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 133.0) no description available & (gnl|cdd|68375 : 101.0) no description available & (reliability: 270.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold1549_389618-396934' '(at3g03100 : 263.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 169.0) no description available & (gnl|cdd|68638 : 138.0) no description available & (reliability: 526.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold2763_420777-426061' '(at2g02050 : 142.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 107.0) no description available & (reliability: 284.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold3423_65911-69576' '(at5g08530 : 871.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (gnl|cdd|37869 : 812.0) no description available & (gnl|cdd|32078 : 635.0) no description available & (reliability: 1742.0) & (original description: Putative frr, Description = NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, PFAM = PF01512;PF10589;PF10531)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold4943_154995-160570' '(q01300|nu1m_pethy : 191.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 183.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 152.0) no description available & (gnl|cdd|84559 : 148.0) no description available & (reliability: 366.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00000321ctg014_1-2235' '(atmg00665 : 318.0) Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c.; NADH dehydrogenase 5B (NAD5B); CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, chain 5 (InterPro:IPR003945), NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal (InterPro:IPR001516), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 5A (TAIR:ATMG00513.1). & (p10330|nu5m_oenbe : 310.0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) - Oenothera bertiana (Bertero's evening primrose) & (reliability: 636.0) & (original description: Putative nad5, Description = NADH dehydrogenase subunit 5, PFAM = PF06455)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00001006ctg017_4645-5319' '(p27062|nu3m_pangi : 170.0) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3) - Panax ginseng (Korean ginseng) & (atmg00990 : 145.0) NADH dehydrogenase subunit 3; NADH dehydrogenase 3 (NAD3); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|81991 : 116.0) no description available & (gnl|cdd|39861 : 105.0) no description available & (reliability: 290.0) & (original description: Putative ND3, Description = NADH-ubiquinone oxidoreductase chain 3, PFAM = PF00507)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00001941ctg015_2748-13716' '(o24143|ndus8_tobac : 387.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Nicotiana tabacum (Co & (at1g79010 : 350.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 302.0) no description available & (gnl|cdd|81787 : 235.0) no description available & (reliability: 700.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00002904ctg000_1-2295' '(at2g07689 : 362.0) NADH-Ubiquinone/plastoquinone (complex I) protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone, ATP synthesis coupled electron transport; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2B (TAIR:ATMG01320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93401|nu2m_oenbe : 318.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 174.0) no description available & (gnl|cdd|39867 : 130.0) no description available & (reliability: 724.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00004547ctg004_4064-6695' '(q43644|ndus1_soltu : 276.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 228.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29469 : 209.0) no description available & (gnl|cdd|37493 : 208.0) no description available & (reliability: 456.0) & (original description: Putative nqo3, Description = NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial, PFAM = PF00384)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00009094ctg004_3477-5791' '(at2g02050 : 122.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 100.0) no description available & (reliability: 244.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00012899ctg000_29288-32327' '(atmg00580 : 236.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 233.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 152.0) no description available & (gnl|cdd|81762 : 141.0) no description available & (reliability: 472.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00017037ctg003_2212-4658' '(q04050|nu4m_bracm : 257.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (atmg00580 : 254.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (gnl|cdd|81762 : 125.0) no description available & (gnl|cdd|40042 : 113.0) no description available & (reliability: 508.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF01059)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00020503ctg006_922-3481' '(atmg00070 : 287.0) NADH dehydrogenase subunit 9; NADH dehydrogenase subunit 9 (NAD9); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (p80261|ndus3_soltu : 278.0) NADH-ubiquinone oxidoreductase 27 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-27kD) (CI-27kD) (NADH dehydrogenase subunit 9) - Solanum tuberosum (Potato) & (gnl|cdd|36925 : 218.0) no description available & (gnl|cdd|81836 : 138.0) no description available & (reliability: 574.0) & (original description: Putative nad9, Description = NADH dehydrogenase subunit 9, PFAM = PF00329)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00020657ctg004_1-6475' '(at4g26965 : 110.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaAnng22240D, Description = BnaAnng22240D protein, PFAM = PF05071)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00023723ctg009_11814-17961' '(at5g67590 : 152.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 142.0) no description available & (gnl|cdd|68375 : 109.0) no description available & (reliability: 304.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00091_99687-106554' '(p80269|ndus8_soltu : 377.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Solanum tuberosum (Po & (at1g79010 : 346.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 303.0) no description available & (gnl|cdd|81787 : 239.0) no description available & (reliability: 692.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00149_217525-220094' '(atmg00070 : 369.0) NADH dehydrogenase subunit 9; NADH dehydrogenase subunit 9 (NAD9); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (p80261|ndus3_soltu : 361.0) NADH-ubiquinone oxidoreductase 27 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-27kD) (CI-27kD) (NADH dehydrogenase subunit 9) - Solanum tuberosum (Potato) & (gnl|cdd|36925 : 287.0) no description available & (gnl|cdd|81836 : 169.0) no description available & (reliability: 738.0) & (original description: Putative NAD9, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, PFAM = PF00329)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00236_87943-95912' '(q43844|ndus7_soltu : 343.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 303.0) no description available & (at5g11770 : 283.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 281.0) no description available & (reliability: 566.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00258_182379-191420' '(q43644|ndus1_soltu : 1331.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 1143.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 1070.0) no description available & (gnl|cdd|82828 : 961.0) no description available & (reliability: 2286.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF13510;PF10588;PF09326;PF00384)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00258_185929-189158' '(q43644|ndus1_soltu : 279.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 229.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 210.0) no description available & (gnl|cdd|29469 : 210.0) no description available & (reliability: 458.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF00384)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00542_476410-482235' '(q43644|ndus1_soltu : 384.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 374.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 367.0) no description available & (gnl|cdd|82828 : 367.0) no description available & (reliability: 748.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF10588)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00849_203598-206521' '(atmg00580 : 251.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 248.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 166.0) no description available & (gnl|cdd|81762 : 157.0) no description available & (reliability: 502.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00854_343496-800092' '(q01300|nu1m_pethy : 170.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 162.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 140.0) no description available & (gnl|cdd|84559 : 137.0) no description available & (reliability: 324.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146;PF00146)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01063_550006-554463' '(at3g03070 : 164.0) NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: Zinc finger, CHCC-type (InterPro:IPR019401), NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria (InterPro:IPR016668); Has 288 Blast hits to 288 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 142; Fungi - 84; Plants - 40; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38666 : 123.0) no description available & (reliability: 328.0) & (original description: Putative At3g03070, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, PFAM = PF10276)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01063_650258-658202' '(at3g03100 : 263.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 168.0) no description available & (gnl|cdd|68638 : 137.0) no description available & (reliability: 526.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01241_436489-438773' '(at2g02050 : 117.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 101.0) no description available & (reliability: 234.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01375_726441-734965' '(at5g52840 : 237.0) NADH-ubiquinone oxidoreductase-related; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, respiratory chain complex I, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ETC complex I subunit (InterPro:IPR006806); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28005.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38575 : 125.0) no description available & (reliability: 474.0) & (original description: Putative At5g52840, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial, PFAM = PF04716)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01494_206556-210017' '(q37680|nu5m_wheat : 792.0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) - Triticum aestivum (Wheat) & (atmg00665 : 789.0) Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c.; NADH dehydrogenase 5B (NAD5B); CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, chain 5 (InterPro:IPR003945), NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal (InterPro:IPR001516), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 5A (TAIR:ATMG00513.1). & (gnl|cdd|81988 : 561.0) no description available & (gnl|cdd|39867 : 237.0) no description available & (reliability: 1578.0) & (original description: Putative nad5, Description = NADH-ubiquinone oxidoreductase chain 5, PFAM = PF00662;PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01512_720652-740753' '(q43844|ndus7_soltu : 317.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 302.0) no description available & (at5g11770 : 284.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 282.0) no description available & (reliability: 568.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02627_193170-204237' '(at4g26965 : 188.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative At4g26965, Description = NADH:ubiquinone oxidoreductase subunit-17.2, PFAM = PF05071)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02723_51704-65690' '(at5g67590 : 148.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 133.0) no description available & (gnl|cdd|68375 : 115.0) no description available & (reliability: 296.0) & (original description: Putative FRO1, Description = NADH dehydrogenase (Ubiquinone) Fe-S protein 4, PFAM = PF04800)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02881_610399-612802' '(at1g49140 : 164.0) Complex I subunit NDUFS6; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT3G18410.2); Has 165 Blast hits to 165 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 92; Plants - 61; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39212 : 89.8) no description available & (reliability: 328.0) & (original description: Putative At3g18410, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, PFAM = PF10249)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02974_200304-202696' '(at3g18410 : 157.0) Complex I subunit NDUFS6; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT1G49140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39212 : 85.2) no description available & (reliability: 314.0) & (original description: Putative At3g18410, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, PFAM = PF10249)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03104_333424-340060' '(at4g04860 : 392.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q4g2j3|der22_maize : 384.0) Derlin-2.2 (ZmDerlin2-2) - Zea mays (Maize) & (gnl|cdd|36076 : 250.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 768.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03341_143746-191520' '(at3g03100 : 224.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 147.0) no description available & (gnl|cdd|68638 : 140.0) no description available & (reliability: 448.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03365_27072-39722' '(at2g20360 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 371.0) no description available & (gnl|cdd|31046 : 86.1) no description available & (reliability: 884.0) & (original description: Putative ndufa9a, Description = NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, 9, PFAM = PF13460)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03365_28511-43629' '(at2g20360 : 551.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 454.0) no description available & (gnl|cdd|31046 : 93.4) no description available & (reliability: 1102.0) & (original description: Putative nuoA9, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial, PFAM = PF13460)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03396_502238-504921' '(atmg00270 : 332.0) NADH dehydrogenase subunit 6; NADH dehydrogenase 6 (NAD6); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 (InterPro:IPR001457); BEST Arabidopsis thaliana protein match is: Cytochrome b/b6 protein (TAIR:ATMG00590.1). & (p60498|nu6m_bracm : 332.0) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH dehydrogenase subunit 6) - Brassica campestris (Field mustard) & (gnl|cdd|81994 : 132.0) no description available & (reliability: 664.0) & (original description: Putative nad6, Description = NADH-ubiquinone oxidoreductase chain 6, PFAM = PF00499)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03953_266252-268605' '(p27062|nu3m_pangi : 176.0) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3) - Panax ginseng (Korean ginseng) & (atmg00990 : 152.0) NADH dehydrogenase subunit 3; NADH dehydrogenase 3 (NAD3); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|81991 : 123.0) no description available & (gnl|cdd|39861 : 110.0) no description available & (reliability: 304.0) & (original description: Putative ND3, Description = NADH-ubiquinone oxidoreductase chain 3, PFAM = PF00507)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04114_63184-68780' '(q01300|nu1m_pethy : 141.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 134.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 107.0) no description available & (gnl|cdd|84559 : 107.0) no description available & (reliability: 268.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04420_528447-542829' '(at2g47690 : 134.0) NADH-ubiquinone oxidoreductase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT3G62790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At3g62790, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B, PFAM = PF10200)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04607_424707-431565' '(at5g67590 : 176.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 162.0) no description available & (gnl|cdd|68375 : 124.0) no description available & (reliability: 352.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05079_67012-69524' '(p27572|nu4m_wheat : 223.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Triticum aestivum (Wheat) & (atmg00580 : 222.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (gnl|cdd|40042 : 178.0) no description available & (gnl|cdd|81762 : 173.0) no description available & (reliability: 444.0) & (original description: Putative nad4, Description = NADH-ubiquinone oxidoreductase chain 4, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05506_49495-52698' '(at5g47890 : 130.0) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38656 : 113.0) no description available & (reliability: 260.0) & (original description: Putative Os04g0310500, Description = Os04g0310500 protein, PFAM = PF05047)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05588_1274883-1278747' '(at5g08530 : 885.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (gnl|cdd|37869 : 814.0) no description available & (gnl|cdd|32078 : 638.0) no description available & (reliability: 1770.0) & (original description: Putative frr, Description = NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, PFAM = PF01512;PF10589;PF10531)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05654_30562-32471' '(at2g07689 : 353.0) NADH-Ubiquinone/plastoquinone (complex I) protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone, ATP synthesis coupled electron transport; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2B (TAIR:ATMG01320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93401|nu2m_oenbe : 310.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 165.0) no description available & (gnl|cdd|39867 : 121.0) no description available & (reliability: 706.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf06203_86642-97692' '(p80269|ndus8_soltu : 398.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Solanum tuberosum (Po & (at1g79010 : 354.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 304.0) no description available & (gnl|cdd|81787 : 237.0) no description available & (reliability: 708.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf07275_16612-19770' '(at5g47890 : 132.0) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38656 : 113.0) no description available & (reliability: 264.0) & (original description: Putative At5g47890, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, PFAM = PF05047)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf07790_345442-351543' '(at4g04860 : 395.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q851x7|derl2_orysa : 385.0) Derlin-2 (OsDerlin 2-1) - Oryza sativa (Rice) & (gnl|cdd|36076 : 254.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 776.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf09071_108262-133832' '(at2g20360 : 551.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 455.0) no description available & (gnl|cdd|31046 : 93.4) no description available & (reliability: 1102.0) & (original description: Putative At2g20360, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial, PFAM = PF13460)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf09321_69753-73250' '(gnl|cdd|36900 : 299.0) no description available & (q43844|ndus7_soltu : 286.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|81942 : 286.0) no description available & (at5g11770 : 281.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf12089_71544-80149' '(at5g18800 : 158.0) Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT3G06310.3); Has 415 Blast hits to 415 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 109; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|38668 : 125.0) no description available & (reliability: 316.0) & (original description: Putative At5g18800, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, PFAM = PF06747)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf15047_7907-10671' '(gnl|cdd|36900 : 156.0) no description available & (gnl|cdd|81942 : 143.0) no description available & (q43844|ndus7_soltu : 127.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (at5g11770 : 126.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf25598_42107-45681' '(atmg01320 : 267.0) encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.; NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1). & (p93401|nu2m_oenbe : 243.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 94.0) no description available & (reliability: 534.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T
'9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf30554_7028-12641' '(q01300|nu1m_pethy : 192.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 184.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 153.0) no description available & (gnl|cdd|84559 : 149.0) no description available & (reliability: 368.0) & (original description: Putative orf108c, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T
'9.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH' '' ''
'9.2.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II' '' ''
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben044scf00003675ctg002_12508-20238' '(at4g05020 : 898.0) NAD(P)H dehydrogenase B2 (NDB2); FUNCTIONS IN: disulfide oxidoreductase activity, oxidoreductase activity, FAD binding, calcium ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, extrinsic to mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1). & (gnl|cdd|37706 : 515.0) no description available & (gnl|cdd|31444 : 268.0) no description available & (reliability: 1796.0) & (original description: Putative NDB2, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial, PFAM = PF00036;PF07992)' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf00214_325587-332550' '(at4g21490 : 817.0) NAD(P)H dehydrogenase B3 (NDB3); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-HAND 2 (InterPro:IPR018249), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B2 (TAIR:AT4G05020.1); Has 16626 Blast hits to 16156 proteins in 2577 species: Archae - 456; Bacteria - 13275; Metazoa - 114; Fungi - 758; Plants - 505; Viruses - 0; Other Eukaryotes - 1518 (source: NCBI BLink). & (gnl|cdd|37706 : 499.0) no description available & (gnl|cdd|31444 : 268.0) no description available & (reliability: 1634.0) & (original description: Putative NDB3, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial, PFAM = PF07992)' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf00756_178090-184493' '(at4g28220 : 822.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 485.0) no description available & (gnl|cdd|31444 : 265.0) no description available & (reliability: 1644.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf01529_449380-457157' '(at4g05020 : 909.0) NAD(P)H dehydrogenase B2 (NDB2); FUNCTIONS IN: disulfide oxidoreductase activity, oxidoreductase activity, FAD binding, calcium ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, extrinsic to mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1). & (gnl|cdd|37706 : 524.0) no description available & (gnl|cdd|31444 : 270.0) no description available & (reliability: 1818.0) & (original description: Putative NDB2, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial, PFAM = PF00036;PF07992)' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf02869_284075-291529' '(gnl|cdd|37706 : 113.0) no description available & (at4g28220 : 94.4) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative NDB1, Description = NAD(P)H dehydrogenase B2, PFAM = )' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf07823_424-9507' '(at4g28220 : 819.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 483.0) no description available & (gnl|cdd|31444 : 269.0) no description available & (reliability: 1638.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T
'9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf16974_62093-83688' '(at4g28220 : 838.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 496.0) no description available & (gnl|cdd|31444 : 273.0) no description available & (reliability: 1676.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T
'9.2.1.3' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.mitochondrial' 'niben101scf01227_530979-534677' '(at5g08740 : 689.0) NAD(P)H dehydrogenase C1 (NDC1); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, cell wall, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 10792 Blast hits to 10785 proteins in 2211 species: Archae - 358; Bacteria - 8162; Metazoa - 316; Fungi - 520; Plants - 321; Viruses - 0; Other Eukaryotes - 1115 (source: NCBI BLink). & (gnl|cdd|31444 : 258.0) no description available & (gnl|cdd|37706 : 129.0) no description available & (reliability: 1378.0) & (original description: Putative NDC1, Description = Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial, PFAM = PF07992)' T
'9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'nbv0.3scaffold92622_703-4577' '(at1g07180 : 338.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|37706 : 212.0) no description available & (gnl|cdd|31444 : 123.0) no description available & (reliability: 676.0) & (original description: Putative NDA1, Description = Putative NADH dehydrogenase, PFAM = PF07992)' T
'9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben044scf00028150ctg000_7523-12289' '(at2g29990 : 681.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 514.0) no description available & (gnl|cdd|31444 : 302.0) no description available & (reliability: 1362.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T
'9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf00180_19039-23941' '(at2g29990 : 671.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 510.0) no description available & (gnl|cdd|31444 : 301.0) no description available & (reliability: 1342.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T
'9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf05880_368849-375459' '(at1g07180 : 726.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|37706 : 522.0) no description available & (gnl|cdd|31444 : 289.0) no description available & (reliability: 1452.0) & (original description: Putative NDA1, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial, PFAM = PF07992)' T
'9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf12528_123671-140366' '(at2g29990 : 753.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 556.0) no description available & (gnl|cdd|31444 : 295.0) no description available & (reliability: 1506.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T
'9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'nbv0.5scaffold322_479553-482027' '(at2g43400 : 112.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (gnl|cdd|37626 : 112.0) no description available & (reliability: 224.0) & (original description: Putative etf, Description = Electron transfer flavoprotein-ubiquinone oxidoreductase, PFAM = PF13450)' T
'9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'nbv0.5scaffold719_101511-107095' '(at5g43430 : 372.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (gnl|cdd|38390 : 335.0) no description available & (gnl|cdd|32269 : 240.0) no description available & (reliability: 744.0) & (original description: Putative ETFB, Description = Electron transfer flavoprotein subunit beta, mitochondrial, PFAM = PF01012)' T
'9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf00415_400657-406621' '(at5g43430 : 372.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (gnl|cdd|38390 : 335.0) no description available & (gnl|cdd|32269 : 241.0) no description available & (reliability: 744.0) & (original description: Putative ETFB, Description = Electron transfer flavoprotein subunit beta, mitochondrial, PFAM = PF01012)' T
'9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf11774_112878-119652' '(at1g50940 : 404.0) Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness.; electron transfer flavoprotein alpha (ETFALPHA); FUNCTIONS IN: copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein, alpha subunit, C-terminal (InterPro:IPR014731), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730), Electron transfer flavoprotein, alpha subunit (InterPro:IPR001308), Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site (InterPro:IPR018206); Has 7540 Blast hits to 7533 proteins in 1658 species: Archae - 158; Bacteria - 4517; Metazoa - 162; Fungi - 143; Plants - 45; Viruses - 0; Other Eukaryotes - 2515 (source: NCBI BLink). & (gnl|cdd|39157 : 359.0) no description available & (gnl|cdd|32208 : 272.0) no description available & (reliability: 808.0) & (original description: Putative ETFA, Description = Electron transfer flavoprotein subunit alpha, mitochondrial, PFAM = PF00766;PF01012)' T
'9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf20935_11306-36330' '(at2g43400 : 912.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (gnl|cdd|37626 : 859.0) no description available & (gnl|cdd|30989 : 260.0) no description available & (reliability: 1824.0) & (original description: Putative ETFQO, Description = Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial, PFAM = PF13450;PF05187)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'nbv0.5scaffold118_193336-197318' '(q40578|aox2_tobac : 409.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 407.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 407.0) no description available & (reliability: 814.0) & (original description: Putative aox, Description = Alternative oxidase, PFAM = PF01786)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'nbv0.5scaffold1495_1203-8446' '(gnl|cdd|85678 : 477.0) no description available & (q41266|aox2_soybn : 441.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 431.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben044scf00005203ctg022_3071-9657' '(gnl|cdd|85678 : 478.0) no description available & (q41266|aox2_soybn : 441.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 430.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf00239_714738-718706' '(q41224|aox1_tobac : 672.0) Alternative oxidase 1, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 504.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 497.0) no description available & (reliability: 1008.0) & (original description: Putative AOX1, Description = Ubiquinol oxidase 1, mitochondrial, PFAM = PF01786)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf06109_48826-52755' '(q41224|aox1_tobac : 644.0) Alternative oxidase 1, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 490.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 488.0) no description available & (reliability: 980.0) & (original description: Putative AOX1, Description = Ubiquinol oxidase 1, mitochondrial, PFAM = PF01786)' T
'9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf07773_136550-143808' '(gnl|cdd|85678 : 477.0) no description available & (q41266|aox2_soybn : 442.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 431.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'nbv0.3scaffold18290_18298-25945' '(p46270|ucr10_soltu : 110.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at3g52730 : 108.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|38704 : 88.5) no description available & (reliability: 216.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'nbv0.3scaffold76173_1299-7612' '(p51135|ucri5_tobac : 490.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 5) (RISP5) - Nicotiana tabacum (Common tobacco) & (at5g13430 : 393.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: male gametophyte, guard cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36884 : 258.0) no description available & (gnl|cdd|58540 : 225.0) no description available & (reliability: 786.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF00355;PF02921)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00262_321516-325249' '(p46269|ucrq_soltu : 126.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 117.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00497_731149-736342' '(p51132|ucri2_tobac : 506.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 2) (RISP2) - Nicotiana tabacum (Common tobacco) & (at5g13440 : 394.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36884 : 255.0) no description available & (gnl|cdd|58540 : 222.0) no description available & (reliability: 788.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF00355;PF02921)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00986_232882-246068' '(p51135|ucri5_tobac : 493.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 5) (RISP5) - Nicotiana tabacum (Common tobacco) & (at5g13440 : 392.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36884 : 257.0) no description available & (gnl|cdd|58540 : 225.0) no description available & (reliability: 784.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF02921;PF00355)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf01396_419835-426428' '(p48502|ucr6_soltu : 194.0) Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) - Solanum tuberosum (Potato) & (at5g25450 : 168.0) Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1). & (gnl|cdd|38650 : 122.0) no description available & (gnl|cdd|85938 : 105.0) no description available & (reliability: 336.0) & (original description: Putative qcr7, Description = Cytochrome b-c1 complex subunit 7, PFAM = PF02271)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf02614_83096-89191' '(p46269|ucrq_soltu : 123.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 115.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf03643_252831-256041' '(atmg00220 : 469.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 463.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|29347 : 207.0) no description available & (gnl|cdd|39862 : 202.0) no description available & (reliability: 938.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04103_656711-660799' '(at5g25450 : 166.0) Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1). & (p48502|ucr6_soltu : 160.0) Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) - Solanum tuberosum (Potato) & (gnl|cdd|38650 : 131.0) no description available & (gnl|cdd|85938 : 93.1) no description available & (reliability: 332.0) & (original description: Putative qcr7, Description = Cytochrome b-c1 complex subunit 7, PFAM = PF02271)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04134_175354-180533' '(at3g52730 : 114.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (p46270|ucr10_soltu : 108.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (gnl|cdd|38704 : 95.1) no description available & (reliability: 228.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04436_604581-610912' '(p46269|ucrq_soltu : 122.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 115.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf07635_3146-6096' '(atmg00220 : 709.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 701.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|31481 : 292.0) no description available & (gnl|cdd|39862 : 277.0) no description available & (reliability: 1418.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T
'9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf08373_126673-135347' '(p46270|ucr10_soltu : 112.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at3g52730 : 111.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|38704 : 90.1) no description available & (reliability: 222.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold15236_1560-8055' '(p25076|cy11_soltu : 498.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 477.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 457.0) no description available & (gnl|cdd|65908 : 368.0) no description available & (reliability: 954.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold18025_6657-9499' '(at3g51790 : 258.0) putative transmembrane protein G1p (AtG1) mRNA, complete; transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink). & (gnl|cdd|32483 : 112.0) no description available & (reliability: 516.0) & (original description: Putative AtG1, Description = At3g51790, PFAM = PF03100)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold22505_12621-18694' '(at1g49380 : 720.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 403.0) no description available & (reliability: 1440.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140;PF05140)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold34717_1-3790' '(p00052|cyc_phaau : 195.0) Cytochrome c - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g10040 : 190.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 152.0) no description available & (gnl|cdd|33277 : 128.0) no description available & (reliability: 380.0) & (original description: Putative CYTC1, Description = Cytochrome c, PFAM = PF00034)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.5scaffold113_424624-429247' '(p00057|cyc_ricco : 175.0) Cytochrome c - Ricinus communis (Castor bean) & (at4g10040 : 174.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 135.0) no description available & (gnl|cdd|33277 : 112.0) no description available & (reliability: 348.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.5scaffold7299_22765-54192' '(q04647|ccbs_dauca : 208.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 181.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 362.0) & (original description: Putative yejR, Description = Cytochrome c biogenesis FN, PFAM = )' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben044scf00006967ctg013_8620-11921' '(q04647|ccbs_dauca : 758.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 552.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 1104.0) & (original description: Putative CCMFN1, Description = Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1, PFAM = PF01578)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00123_432064-446990' '(p25076|cy11_soltu : 595.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 464.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 459.0) no description available & (gnl|cdd|65908 : 372.0) no description available & (reliability: 928.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00321_521403-527472' '(at1g49380 : 748.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 411.0) no description available & (reliability: 1496.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140;PF05140)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00901_740062-747095' '(p25076|cy11_soltu : 562.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 468.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 454.0) no description available & (gnl|cdd|65908 : 369.0) no description available & (reliability: 936.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01582_257183-261330' '(atmg00180 : 646.0) cytochrome c biogenesis orf452; cytochrome C biogenesis 452 (CCB452); LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07815.1). & (p38451|ymf02_marpo : 214.0) Hypothetical 37.0 kDa protein in RPS2 3'region (ORF 322) - Marchantia polymorpha (Liverwort) & (reliability: 1292.0) & (original description: Putative CCMFC, Description = Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein, PFAM = PF16327)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01623_922608-974093' '(q04647|ccbs_dauca : 210.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 182.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 364.0) & (original description: Putative yejR, Description = Cytochrome c biogenesis FN, PFAM = PF01578)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01623_971452-973934' '(q04647|ccbs_dauca : 278.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00960 : 192.0) Encodes a protein of the mitochondrial membrane which has been shown to be present in a number of unidentified complexes including a 500-KDa complex postulated to have heme lyase activity, in which another protein (AtCCMH, AT1G15220) is also involved. cytochrome c biogenesis orf203.; CCB203; FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: mitochondrial inner membrane, protein complex; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569); BEST Arabidopsis thaliana protein match is: Cytochrome C assembly protein (TAIR:AT2G07768.1). & (reliability: 384.0) & (original description: Putative ccmF, Description = Cytochrome c-type biogenesis protein CcmF, PFAM = PF01578)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01749_140448-143290' '(at3g51790 : 257.0) putative transmembrane protein G1p (AtG1) mRNA, complete; transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink). & (gnl|cdd|32483 : 112.0) no description available & (reliability: 514.0) & (original description: Putative AtG1, Description = At3g51790, PFAM = PF03100)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf02182_1922022-1925811' '(p00052|cyc_phaau : 182.0) Cytochrome c - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g10040 : 179.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 153.0) no description available & (gnl|cdd|33277 : 129.0) no description available & (reliability: 358.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf03422_517073-519714' '(at1g15220 : 132.0) Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.; CCMH; CONTAINS InterPro DOMAIN/s: Cytochrome C biogenesis protein CcmH (InterPro:IPR005616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative CCMH, Description = Cytochrome c-type biogenesis CcmH-like mitochondrial protein, PFAM = PF03918)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf03600_312158-319624' '(p25076|cy11_soltu : 498.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 477.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 458.0) no description available & (gnl|cdd|65908 : 368.0) no description available & (reliability: 954.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf06646_41702-47638' '(at1g15220 : 206.0) Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.; CCMH; CONTAINS InterPro DOMAIN/s: Cytochrome C biogenesis protein CcmH (InterPro:IPR005616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32902 : 93.5) no description available & (reliability: 412.0) & (original description: Putative CCMH, Description = Cytochrome c-type biogenesis CcmH-like mitochondrial protein, PFAM = PF03918)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf09710_6435-9052' '(atmg00110 : 293.0) Encodes a mitochondria-encoded cytochrome c biogenesis protein.; cytochrome C biogenesis 206 (CCB206); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein CcmB (InterPro:IPR003544). & (p38454|ccmb_marpo : 169.0) Putative cytochrome c biogenesis ccmB-like mitochondrial protein (ORF 277) - Marchantia polymorpha (Liverwort) & (gnl|cdd|67017 : 90.6) no description available & (reliability: 586.0) & (original description: Putative ccmB, Description = Cytochrome c biogenesis B, PFAM = )' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf10575_45432-51484' '(at1g49380 : 378.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 166.0) no description available & (reliability: 756.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140)' T
'9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf21408_69272-75988' '(p00055|cyc_orysa : 197.0) Cytochrome c - Oryza sativa (Rice) & (at4g10040 : 193.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 152.0) no description available & (gnl|cdd|33277 : 133.0) no description available & (reliability: 386.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold802_3549-10145' '(at1g22450 : 139.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 126.0) no description available & (gnl|cdd|58650 : 122.0) no description available & (reliability: 278.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold4065_41054-54078' '(at3g08950 : 365.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 304.0) no description available & (gnl|cdd|48517 : 207.0) no description available & (reliability: 730.0) & (original description: Putative SCO1, Description = Putative SCO1 protein, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold4866_61510-66433' '(at4g37830 : 114.0) cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative COX6A, Description = Cytochrome c oxidase subunit 6a, mitochondrial, PFAM = PF02046)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold15232_9792-15498' '(at4g28060 : 132.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT5G57815.1); Has 578 Blast hits to 578 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 306; Fungi - 118; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38267 : 127.0) no description available & (gnl|cdd|58650 : 123.0) no description available & (reliability: 264.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit VIb, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold43471_627-10260' '(at1g57600 : 635.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 247.0) no description available & (gnl|cdd|31882 : 99.0) no description available & (reliability: 1270.0) & (original description: Putative At1g57600, Description = MBOAT (Membrane bound O-acyl transferase)-like protein, PFAM = PF03062)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold55223_1-8927' '(at1g22450 : 132.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 124.0) no description available & (gnl|cdd|58650 : 122.0) no description available & (reliability: 264.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold109888_1-2634' '(atmg00160 : 225.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (p98012|cox2_betvu : 224.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (gnl|cdd|39964 : 158.0) no description available & (gnl|cdd|66473 : 86.7) no description available & (reliability: 450.0) & (original description: Putative cox2, Description = Cytochrome oxidase subunit II, PFAM = PF00252;PF02790)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold143406_1-1218' '(at1g80230 : 84.3) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = )' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold90_592250-608120' '(at1g57600 : 711.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 283.0) no description available & (gnl|cdd|86224 : 97.1) no description available & (reliability: 1422.0) & (original description: Putative At1g57600, Description = MBOAT (Membrane bound O-acyl transferase)-like protein, PFAM = PF03062)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold310_238581-241799' '(at3g15640 : 114.0) Rubredoxin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT1G80230.1); Has 464 Blast hits to 464 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 86; Plants - 102; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38562 : 90.5) no description available & (reliability: 228.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold1107_46747-65913' '(at1g80230 : 125.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 103.0) no description available & (gnl|cdd|28837 : 99.5) no description available & (reliability: 250.0) & (original description: Putative CytC5b, Description = Cytochrome c oxidase subunit 5B, PFAM = PF01215)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold1787_329951-335138' '(at4g39740 : 246.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 223.0) no description available & (gnl|cdd|48517 : 170.0) no description available & (reliability: 492.0) & (original description: Putative HCC2, Description = Putative electon transport protein SCO1/SCO2, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold3730_91899-99471' '(at1g80230 : 186.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 141.0) no description available & (gnl|cdd|28837 : 121.0) no description available & (reliability: 372.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold4558_21832-27496' '(at4g39740 : 239.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 215.0) no description available & (gnl|cdd|48517 : 167.0) no description available & (reliability: 478.0) & (original description: Putative HCC2, Description = Putative electon transport protein SCO1/SCO2, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold10363_2005-4799' '(p32808|cox3_helan : 447.0) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III) - Helianthus annuus (Common sunflower) & (atmg00730 : 419.0) Encodes cytochrome c oxidase subunit 3.; cytochrome c oxidase subunit 3 (COX3); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit III (InterPro:IPR000298); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit III (TAIR:AT2G07687.1). & (gnl|cdd|84823 : 370.0) no description available & (gnl|cdd|39863 : 338.0) no description available & (reliability: 838.0) & (original description: Putative COX3, Description = Cytochrome c oxidase subunit 3, PFAM = PF00510)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold10438_2372-5952' '(p07506|cox1_soybn : 903.0) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) - Glycine max (Soybean) & (atmg01360 : 884.0) cytochrome c oxidase subunit 1; cytochrome oxidase (COX1); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit I bacterial type (InterPro:IPR014241), Cytochrome c oxidase, subunit I (InterPro:IPR000883). & (gnl|cdd|29934 : 818.0) no description available & (gnl|cdd|39966 : 249.0) no description available & (reliability: 1768.0) & (original description: Putative coxI, Description = Cytochrome c oxidase subunit 1, PFAM = PF00115)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben044scf00000524ctg000_10295-14004' '(p98012|cox2_betvu : 469.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (atmg00160 : 464.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (gnl|cdd|39964 : 362.0) no description available & (gnl|cdd|84533 : 192.0) no description available & (reliability: 928.0) & (original description: Putative COX2, Description = Cytochrome c oxidase subunit 2, PFAM = PF02790;PF00116)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben044scf00013238ctg025_11549-25191' '(at3g08950 : 363.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 303.0) no description available & (gnl|cdd|48517 : 207.0) no description available & (reliability: 726.0) & (original description: Putative HCC1, Description = Protein SCO1 homolog 1, mitochondrial, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00123_648137-656389' '(at1g80230 : 182.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 142.0) no description available & (gnl|cdd|28837 : 119.0) no description available & (reliability: 364.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00149_576667-597742' '(at3g08950 : 365.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 304.0) no description available & (gnl|cdd|48517 : 208.0) no description available & (reliability: 730.0) & (original description: Putative v1g79458, Description = Predicted protein, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00702_89909-96159' '(at1g28140 : 325.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|34972 : 109.0) no description available & (reliability: 650.0) & (original description: Putative CPL10, Description = Predicted protein, PFAM = PF10063)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00901_650020-668619' '(at1g80230 : 184.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 141.0) no description available & (gnl|cdd|28837 : 122.0) no description available & (reliability: 368.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01353_231432-233620' '(q8vy39|cx5c2_helan : 100.0) Cytochrome c oxidase polypeptide Vc-2 (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c-2) - Helianthus annuus (Common sunflower) & (gnl|cdd|69331 : 100.0) no description available & (at5g61310 : 97.8) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT2G47380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01825_545689-551939' '(at4g39740 : 263.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 248.0) no description available & (gnl|cdd|48517 : 171.0) no description available & (reliability: 526.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01825_552229-545238' '(at4g39740 : 264.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 248.0) no description available & (gnl|cdd|48517 : 171.0) no description available & (reliability: 528.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02160_605956-609766' '(p07506|cox1_soybn : 820.0) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) - Glycine max (Soybean) & (atmg01360 : 810.0) cytochrome c oxidase subunit 1; cytochrome oxidase (COX1); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit I bacterial type (InterPro:IPR014241), Cytochrome c oxidase, subunit I (InterPro:IPR000883). & (gnl|cdd|29934 : 753.0) no description available & (gnl|cdd|39966 : 239.0) no description available & (reliability: 1620.0) & (original description: Putative coxI, Description = Cytochrome c oxidase subunit 1, PFAM = PF00115)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02247_125861-133174' '(at3g17910 : 355.0) Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly.; SURFEIT 1 (SURF1); CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT1G48510.1); Has 1714 Blast hits to 1712 proteins in 488 species: Archae - 0; Bacteria - 777; Metazoa - 126; Fungi - 127; Plants - 43; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (gnl|cdd|36776 : 179.0) no description available & (gnl|cdd|33155 : 121.0) no description available & (reliability: 710.0) & (original description: Putative SURF1, Description = Surfeit locus protein 1, PFAM = PF02104)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02367_549345-555941' '(at1g22450 : 140.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 129.0) no description available & (gnl|cdd|58650 : 121.0) no description available & (reliability: 280.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02537_206389-215623' '(at1g22450 : 131.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 124.0) no description available & (gnl|cdd|58650 : 121.0) no description available & (reliability: 262.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02714_657142-673288' '(at1g57600 : 646.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 252.0) no description available & (gnl|cdd|31882 : 104.0) no description available & (reliability: 1292.0) & (original description: Putative At1g57600, Description = Putative membrane-bound O-acyltransferase C24H6.01c, PFAM = PF03062)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf03964_118668-131361' '(at1g22450 : 138.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 120.0) no description available & (gnl|cdd|58650 : 108.0) no description available & (reliability: 276.0) & (original description: Putative cox6b1, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06569_192908-200217' '(at4g39740 : 259.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 244.0) no description available & (gnl|cdd|48517 : 169.0) no description available & (reliability: 518.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06864_18967-23472' '(gnl|cdd|69331 : 110.0) no description available & (p19173|cox5c_ipoba : 87.8) Cytochrome c oxidase polypeptide Vc (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c) - Ipomoea batatas (Sweet potato) (Batate) & (at5g40382 : 80.5) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT5G61310.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06969_146474-150659' '(at1g66590 : 118.0) cytochrome c oxidase 19-1 (COX19-1); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38687 : 92.5) no description available & (reliability: 236.0) & (original description: Putative PHYPADRAFT_154024, Description = Predicted protein, PFAM = PF06747)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf07008_35689-41845' '(at1g66590 : 138.0) cytochrome c oxidase 19-1 (COX19-1); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38687 : 107.0) no description available & (reliability: 276.0) & (original description: Putative Sb09g028140, Description = Putative uncharacterized protein Sb09g028140, PFAM = PF06747)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf07616_47606-58525' '(at1g02410 : 332.0) cytochrome c oxidase assembly protein CtaG / Cox11 family; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 2749 Blast hits to 2749 proteins in 659 species: Archae - 0; Bacteria - 997; Metazoa - 98; Fungi - 130; Plants - 41; Viruses - 0; Other Eukaryotes - 1483 (source: NCBI BLink). & (gnl|cdd|37751 : 295.0) no description available & (gnl|cdd|68031 : 249.0) no description available & (reliability: 664.0) & (original description: Putative CTAG, Description = Cytochrome c oxidase assembly protein ctaG, PFAM = PF04442)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf09028_21131-26988' '(at3g17910 : 364.0) Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly.; SURFEIT 1 (SURF1); CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT1G48510.1); Has 1714 Blast hits to 1712 proteins in 488 species: Archae - 0; Bacteria - 777; Metazoa - 126; Fungi - 127; Plants - 43; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (gnl|cdd|36776 : 181.0) no description available & (gnl|cdd|33155 : 126.0) no description available & (reliability: 728.0) & (original description: Putative SURF1, Description = Surfeit locus protein 1, PFAM = PF02104)' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf10132_61561-63752' '(p19173|cox5c_ipoba : 107.0) Cytochrome c oxidase polypeptide Vc (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c) - Ipomoea batatas (Sweet potato) (Batate) & (gnl|cdd|69331 : 105.0) no description available & (at5g40382 : 97.4) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT5G61310.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T
'9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf10694_1320-4300' '(atmg00160 : 226.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (p98012|cox2_betvu : 225.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (gnl|cdd|39964 : 156.0) no description available & (gnl|cdd|66473 : 85.5) no description available & (reliability: 452.0) & (original description: Putative cox2, Description = Cytochrome oxidase subunit II, PFAM = PF02790;PF00252)' T
'9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf01209_29753-37246' '(at3g54110 : 496.0) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.; plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). & (gnl|cdd|35972 : 387.0) no description available & (gnl|cdd|84566 : 85.3) no description available & (reliability: 992.0) & (original description: Putative PUMP1, Description = Mitochondrial uncoupling protein 1, PFAM = PF00153;PF00153;PF00153)' T
'9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf07399_115187-122003' '(at3g54110 : 497.0) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.; plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). & (gnl|cdd|35972 : 388.0) no description available & (gnl|cdd|84566 : 85.3) no description available & (reliability: 994.0) & (original description: Putative PUMP1, Description = Mitochondrial uncoupling protein 1, PFAM = PF00153;PF00153;PF00153)' T
'9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf07511_140546-143514' '(at2g22500 : 389.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 359.0) no description available & (gnl|cdd|84566 : 84.6) no description available & (reliability: 736.0) & (original description: Putative PUMP4, Description = Mitochondrial uncoupling protein 4, PFAM = PF00153;PF00153;PF00153)' T
'9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf14299_151872-154996' '(at2g22500 : 405.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 364.0) no description available & (gnl|cdd|84566 : 83.4) no description available & (reliability: 768.0) & (original description: Putative ucpB, Description = Mitochondrial 2-oxoglutarate/malate carrier protein, PFAM = PF00153;PF00153;PF00153)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.3scaffold7333_34323-38597' '(at1g51650 : 123.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 122.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 246.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.3scaffold46201_5886-12110' '(p22778|atpo_ipoba : 314.0) ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) - Ipomoea batatas (Sweet potato) (Batate) & (at5g13450 : 231.0) delta subunit of Mt ATP synthase (ATP5); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, cobalt ion binding, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 5632 Blast hits to 5632 proteins in 1944 species: Archae - 0; Bacteria - 3697; Metazoa - 218; Fungi - 134; Plants - 154; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|36875 : 202.0) no description available & (gnl|cdd|84616 : 159.0) no description available & (reliability: 462.0) & (original description: Putative atpH, Description = Oligomycin sensitivity conferring protein, PFAM = PF00213)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold165_844543-850149' '(p17614|atpbm_nicpl : 921.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 853.0) no description available & (at5g08680 : 843.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 813.0) no description available & (reliability: 1686.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold654_453273-455779' '(gnl|cdd|79277 : 210.0) no description available & (gnl|cdd|36564 : 181.0) no description available & (p06541|atpb_chlre : 176.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 162.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 318.0) & (original description: Putative atbB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold2591_116916-120101' '(at4g26210 : 205.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.8) no description available & (reliability: 410.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold2922_207593-210243' '(p17614|atpbm_nicpl : 216.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g08680 : 135.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 118.0) no description available & (gnl|cdd|82909 : 114.0) no description available & (reliability: 270.0) & (original description: Putative atpD, Description = ATP synthase subunit beta, PFAM = PF02874;PF11421)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00003250ctg003_2482-4949' '(p41248|ymf19_helan : 246.0) Hypothetical protein ymf19 (ORFB) - Helianthus annuus (Common sunflower) & (atmg00480 : 231.0) Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.; Plant mitochondrial ATPase, F0 complex, subunit 8 protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit 8, mitochondrial, plant (InterPro:IPR003319), Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); BEST Arabidopsis thaliana protein match is: Plant mitochondrial ATPase, F0 complex, subunit 8 protein (TAIR:AT2G07707.1). & (gnl|cdd|69942 : 97.0) no description available & (reliability: 462.0) & (original description: Putative atp8, Description = ATPase subunit 8, PFAM = PF06449;PF02326)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00006615ctg003_1-4110' '(at5g16350 : 89.7) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G12420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative FOP, Description = O-acyltransferase (WSD1-like) family protein, PFAM = )' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00019305ctg019_15078-20789' '(p17614|atpbm_nicpl : 926.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 855.0) no description available & (at5g08690 : 842.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 810.0) no description available & (reliability: 1684.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF00006;PF11421)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00033_172072-187188' '(p26360|atpg3_ipoba : 511.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 468.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (gnl|cdd|84628 : 289.0) no description available & (gnl|cdd|36744 : 286.0) no description available & (reliability: 936.0) & (original description: Putative ATPC, Description = ATP synthase subunit gamma, mitochondrial, PFAM = PF00231)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00163_791575-807652' '(q40089|atp4_ipoba : 332.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 264.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.8) no description available & (reliability: 528.0) & (original description: Putative PPFRU36, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00430_110311-112577' '(at5g59613 : 80.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1). & (reliability: 160.2) & (original description: Putative At3g46430, Description = ATP synthase 6 kDa subunit, mitochondrial, PFAM = )' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00454_646955-652350' '(q40089|atp4_ipoba : 337.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 274.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.0) no description available & (reliability: 548.0) & (original description: Putative atpC, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00551_654997-658113' '(at4g26210 : 201.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 93.1) no description available & (reliability: 402.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00854_1082163-1085431' '(gnl|cdd|82909 : 135.0) no description available & (gnl|cdd|36564 : 117.0) no description available & (q8s8w8|atpb_atrbe : 114.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00480 : 111.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 206.0) & (original description: Putative atpB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00876_194713-202595' '(at5g53390 : 464.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|70441 : 213.0) no description available & (reliability: 836.0) & (original description: Putative FOP, Description = FOLDED PETALS, PFAM = PF03007;PF06974)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00905_1611663-1617888' '(at3g49190 : 195.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1419 Blast hits to 1410 proteins in 214 species: Archae - 2; Bacteria - 1155; Metazoa - 6; Fungi - 2; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|70441 : 86.8) no description available & (reliability: 372.0) & (original description: Putative TCM_046721, Description = O-acyltransferase family protein, PFAM = PF03007;PF06974)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00974_18055-24407' '(p26360|atpg3_ipoba : 513.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 476.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (gnl|cdd|36744 : 289.0) no description available & (gnl|cdd|84628 : 286.0) no description available & (reliability: 952.0) & (original description: Putative ATPC, Description = ATP synthase subunit gamma, mitochondrial, PFAM = PF00231)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01146_418340-422041' '(at4g26210 : 200.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.8) no description available & (reliability: 400.0) & (original description: Putative At2g19680, Description = Copia-like retroelement pol polyprotein, PFAM = PF04718)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01271_170643-177816' '(at1g51650 : 120.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 120.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 240.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01460_482222-487506' '(p17614|atpbm_nicpl : 937.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 856.0) no description available & (at5g08690 : 840.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 810.0) no description available & (reliability: 1680.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01949_21687-24154' '(p41248|ymf19_helan : 280.0) Hypothetical protein ymf19 (ORFB) - Helianthus annuus (Common sunflower) & (atmg00480 : 258.0) Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.; Plant mitochondrial ATPase, F0 complex, subunit 8 protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit 8, mitochondrial, plant (InterPro:IPR003319), Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); BEST Arabidopsis thaliana protein match is: Plant mitochondrial ATPase, F0 complex, subunit 8 protein (TAIR:AT2G07707.1). & (gnl|cdd|69942 : 111.0) no description available & (reliability: 516.0) & (original description: Putative atp8, Description = ATPase subunit 8, PFAM = PF06449;PF02326)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf02338_72995-78634' '(at4g29480 : 186.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT2G19680.2); Has 96 Blast hits to 96 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68296 : 87.3) no description available & (reliability: 372.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf02828_15251-30892' '(p17614|atpbm_nicpl : 858.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 856.0) no description available & (gnl|cdd|36564 : 813.0) no description available & (at5g08690 : 802.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1604.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03039_314599-317709' '(at1g51650 : 119.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 119.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 238.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03579_209741-227458' '(p22778|atpo_ipoba : 305.0) ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) - Ipomoea batatas (Sweet potato) (Batate) & (at5g13450 : 229.0) delta subunit of Mt ATP synthase (ATP5); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, cobalt ion binding, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 5632 Blast hits to 5632 proteins in 1944 species: Archae - 0; Bacteria - 3697; Metazoa - 218; Fungi - 134; Plants - 154; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|36875 : 203.0) no description available & (gnl|cdd|84616 : 158.0) no description available & (reliability: 458.0) & (original description: Putative atpH, Description = Oligomycin sensitivity conferring protein, PFAM = PF00213)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03679_340419-347434' '(q40089|atp4_ipoba : 335.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 262.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 159.0) no description available & (gnl|cdd|30704 : 83.0) no description available & (reliability: 524.0) & (original description: Putative atpC, Description = ATP synthase F1, epsilon subunit, PFAM = PF02823)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03765_2176-5035' '(p17254|atp9_helan : 87.8) ATP synthase protein 9, mitochondrial (EC 3.6.3.14) (Lipid-binding protein) - Helianthus annuus (Common sunflower) & (atmg01080 : 82.8) subunit 9 of mitochondrial F0-ATPase; mitochondrial F0-ATPase subunit 9 (ATP9); FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454); BEST Arabidopsis thaliana protein match is: ATP synthase subunit C family protein (TAIR:AT2G07671.1). & (reliability: 165.6) & (original description: Putative ATP9, Description = ATP synthase subunit 9, mitochondrial, PFAM = PF00137)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04184_65735-75782' '(at3g52300 : 234.0) "ATP synthase D chain, mitochondrial" (ATPQ); FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, cytosolic ribosome, nucleolus, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38576 : 118.0) no description available & (reliability: 468.0) & (original description: Putative atp5, Description = ATP synthase subunit D, PFAM = PF05873)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04737_40189-46021' '(at3g52300 : 234.0) "ATP synthase D chain, mitochondrial" (ATPQ); FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, cytosolic ribosome, nucleolus, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38576 : 119.0) no description available & (reliability: 468.0) & (original description: Putative atpQ, Description = ATP synthase subunit D, PFAM = PF05873)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04958_68122-71648' '(p05495|atpam_nicpl : 979.0) ATP synthase subunit alpha, mitochondrial (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g07698 : 937.0) ATPase, F1 complex, alpha subunit protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, zinc ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: male gametophyte, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase subunit 1 (TAIR:ATMG01190.1); Has 42544 Blast hits to 42509 proteins in 10112 species: Archae - 769; Bacteria - 22602; Metazoa - 1520; Fungi - 703; Plants - 8267; Viruses - 0; Other Eukaryotes - 8683 (source: NCBI BLink). & (gnl|cdd|82910 : 796.0) no description available & (gnl|cdd|36567 : 337.0) no description available & (reliability: 1874.0) & (original description: Putative ATPA, Description = ATP synthase subunit alpha, mitochondrial, PFAM = PF00006;PF00306;PF02874)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04973_54053-61401' '(p17614|atpbm_nicpl : 955.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 854.0) no description available & (at5g08670 : 838.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, plasma membrane, chloroplast, mitochondrial respiratory chain complex I, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 805.0) no description available & (reliability: 1676.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF11421;PF02874;PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf05449_57106-60513' '(at4g26210 : 204.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.4) no description available & (reliability: 408.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf07103_165009-167573' '(gnl|cdd|79277 : 195.0) no description available & (gnl|cdd|36564 : 169.0) no description available & (p06541|atpb_chlre : 162.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 149.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 294.0) & (original description: Putative atbB, Description = ATP synthase subunit beta, PFAM = PF00006)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf07741_190877-195413' '(at1g51650 : 121.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 121.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 242.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08179_130615-137373' '(q40089|atp4_ipoba : 335.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 270.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.4) no description available & (reliability: 540.0) & (original description: Putative atpC, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08565_17167-20351' '(p05499|atp6_tobac : 640.0) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6) - Nicotiana tabacum (Common tobacco) & (atmg00410 : 433.0) ATPase subunit 6; ATPase subunit 6-1 (ATP6-1); CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568); BEST Arabidopsis thaliana protein match is: ATPase, F0 complex, subunit A protein (TAIR:AT2G07741.1). & (gnl|cdd|39864 : 217.0) no description available & (gnl|cdd|84536 : 182.0) no description available & (reliability: 866.0) & (original description: Putative ATP6, Description = ATP synthase subunit a, PFAM = PF00119)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08672_395665-397353' '(p09003|mi25_tobac : 298.0) Uncharacterized mitochondrial 22 kDa protein (ORF 25) - Nicotiana tabacum (Common tobacco) & (atmg00640 : 251.0) encodes a plant b subunit of mitochondrial ATP synthase based on structural similarity and the presence in the F(0) complex.; hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B, mitochondrial (InterPro:IPR008688). & (gnl|cdd|68956 : 147.0) no description available & (reliability: 502.0) & (original description: Putative atp4, Description = ATPase subunit 4, PFAM = PF05405)' T
'9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf12308_103252-109459' '(p17614|atpbm_nicpl : 944.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 855.0) no description available & (at5g08680 : 839.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 808.0) no description available & (reliability: 1678.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.3scaffold3294_65441-74912' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 456.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.3scaffold21476_16560-27592' '(at4g01660 : 682.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 499.0) no description available & (gnl|cdd|31005 : 242.0) no description available & (reliability: 1364.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold1066_285652-293460' '(at4g21090 : 225.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 189.0) no description available & (reliability: 450.0) & (original description: Putative adxhom, Description = Ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold2318_234619-252823' '(at4g05450 : 229.0) mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 456.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold2683_193068-215585' '(at4g21090 : 226.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 190.0) no description available & (reliability: 452.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold3507_268022-279051' '(at4g01660 : 687.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 500.0) no description available & (gnl|cdd|31005 : 243.0) no description available & (reliability: 1374.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben044ctg26167358_1-4718' '(at4g21090 : 222.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 186.0) no description available & (reliability: 444.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf00327_181564-191679' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 438.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf02043_685074-690922' '(at2g03690 : 352.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38454 : 291.0) no description available & (gnl|cdd|68588 : 291.0) no description available & (reliability: 704.0) & (original description: Putative coq4, Description = Coenzyme Q biosynthesis protein 4 homolog, PFAM = PF05019)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf05955_335299-339383' '(at4g01660 : 139.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative ABC1, Description = Ubiquinone biosynthesis protein, PFAM = )' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf09098_108588-119351' '(at4g01660 : 685.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 502.0) no description available & (gnl|cdd|31005 : 240.0) no description available & (reliability: 1370.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf10092_33169-50450' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 438.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf10498_246222-255845' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 193.0) no description available & (reliability: 456.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'9.1001' 'mitochondrial electron transport / ATP synthesis' 'ubiquinone-20' 'Respiration; Redox electron carrier' M
'9.1001' 'mitochondrial electron transport / ATP synthesis' 'vitamin k1' 'Respiration; Redox electron carrier' M
'10' 'cell wall' 'nbv0.5scaffold4348_9516-12939' '(at4g24140 : 315.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 107.0) no description available & (reliability: 610.0) & (original description: Putative BnaA08g02430D, Description = BnaA08g02430D protein, PFAM = PF00561)' T
'10' 'cell wall' 'niben044scf00002645ctg010_1-2441' '(at5g17780 : 194.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 104.0) no description available & (reliability: 376.0) & (original description: Putative BDG1, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T
'10' 'cell wall' 'niben101scf11471_58112-64111' '(at4g24140 : 605.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 204.0) no description available & (gnl|cdd|30941 : 95.2) no description available & (reliability: 1174.0) & (original description: Putative BDG1, Description = Putative alpha/beta-hydrolase involved in synthesis of cutin, PFAM = PF00561)' T
'10' 'cell wall' 'niben101scf17701_10987-17885' '(at4g24140 : 592.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 204.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 1144.0) & (original description: Putative Os06g0132500, Description = Os06g0132500 protein, PFAM = PF00561)' T
'10.1' 'cell wall.precursor synthesis' 'niben044scf00013930ctg006_7578-16727' '(at1g31070 : 826.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 581.0) no description available & (gnl|cdd|34006 : 258.0) no description available & (reliability: 1652.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'10.1' 'cell wall.precursor synthesis' 'niben101scf01047_1-9056' '(at5g18070 : 696.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 655.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (gnl|cdd|37748 : 614.0) no description available & (gnl|cdd|31306 : 122.0) no description available & (reliability: 1392.0) & (original description: Putative DRT101, Description = Phosphoacetylglucosamine mutase, PFAM = PF00408;PF02878;PF02880)' T
'10.1' 'cell wall.precursor synthesis' 'niben101scf01739_385108-394953' '(at1g31070 : 825.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 584.0) no description available & (gnl|cdd|34006 : 259.0) no description available & (reliability: 1650.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'10.1' 'cell wall.precursor synthesis' 'niben101scf03705_260633-269690' '(at1g31070 : 835.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 585.0) no description available & (gnl|cdd|34006 : 261.0) no description available & (reliability: 1670.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'10.1' 'cell wall.precursor synthesis' 'niben101scf10448_31359-45535' '(at5g18070 : 700.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 650.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (gnl|cdd|37748 : 615.0) no description available & (gnl|cdd|31306 : 118.0) no description available & (reliability: 1400.0) & (original description: Putative DRT101, Description = Phosphoacetylglucosamine mutase, PFAM = PF00408;PF02878;PF02878;PF02880)' T
'10.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase' '' ''
'10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben044scf00039976ctg006_1091-4926' '(at2g39770 : 662.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 559.0) no description available & (gnl|cdd|31401 : 298.0) no description available & (reliability: 1324.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00132;PF00483)' T
'10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf00586_1420-4555' '(at2g39770 : 634.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 544.0) no description available & (gnl|cdd|31401 : 292.0) no description available & (reliability: 1268.0) & (original description: Putative mpg1, Description = Mannose-1-phosphate guanyltransferase, PFAM = PF00132;PF00483)' T
'10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf00806_482806-486515' '(at2g39770 : 658.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 553.0) no description available & (gnl|cdd|31401 : 297.0) no description available & (reliability: 1316.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00132;PF00483)' T
'10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf10330_39817-43572' '(at2g39770 : 664.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 556.0) no description available & (gnl|cdd|31401 : 296.0) no description available & (reliability: 1328.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00483;PF00132)' T
'10.1.1.2' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP fucose and fucokinase' 'niben101scf14922_56658-67339' '(at1g01220 : 1452.0) Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.; L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink). & (gnl|cdd|87412 : 433.0) no description available & (gnl|cdd|39843 : 196.0) no description available & (reliability: 2904.0) & (original description: Putative FKGP, Description = Bifunctional fucokinase/fucose pyrophosphorylase, PFAM = PF08544;PF07959;PF00288)' T
'10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'niben101scf05029_23524-41024' '(at5g52560 : 1016.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 305.0) no description available & (gnl|cdd|34006 : 95.4) no description available & (reliability: 2032.0) & (original description: Putative USP, Description = UDP-sugar pyrophosphorylase, PFAM = PF01704)' T
'10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'niben101scf08753_258668-278377' '(at5g52560 : 1015.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 307.0) no description available & (gnl|cdd|34006 : 95.8) no description available & (reliability: 2030.0) & (original description: Putative USP, Description = UDP-sugar pyrophosphorylase, PFAM = PF01704)' T
'10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf00324_255790-262101' '(at4g10960 : 602.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36585 : 501.0) no description available & (q43070|gale1_pea : 496.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|31284 : 451.0) no description available & (reliability: 1204.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T
'10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf02011_438259-444247' '(at4g10960 : 588.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36585 : 510.0) no description available & (q43070|gale1_pea : 481.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|31284 : 447.0) no description available & (reliability: 1176.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T
'10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf07391_538125-543297' '(at1g12780 : 619.0) Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.; UDP-D-glucose/UDP-D-galactose 4-epimerase 1 (UGE1); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress, galactose biosynthetic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 3 (TAIR:AT1G63180.1); Has 42430 Blast hits to 42420 proteins in 2995 species: Archae - 799; Bacteria - 25009; Metazoa - 650; Fungi - 500; Plants - 1081; Viruses - 38; Other Eukaryotes - 14353 (source: NCBI BLink). & (q43070|gale1_pea : 618.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|36585 : 497.0) no description available & (gnl|cdd|31284 : 447.0) no description available & (reliability: 1238.0) & (original description: Putative UGE1, Description = Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1, PFAM = PF16363)' T
'10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf01557_368965-376680' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 387.0) no description available & (gnl|cdd|84032 : 252.0) no description available & (reliability: 1510.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase 1, PFAM = PF01370)' T
'10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf02252_163508-169208' '(at1g08200 : 736.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 384.0) no description available & (gnl|cdd|84032 : 262.0) no description available & (reliability: 1472.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase, PFAM = PF01370)' T
'10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf03862_361409-366264' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 387.0) no description available & (gnl|cdd|84032 : 256.0) no description available & (reliability: 1510.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase 1, PFAM = PF01370)' T
'10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf03973_152509-158612' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 385.0) no description available & (gnl|cdd|84032 : 257.0) no description available & (reliability: 1510.0) & (original description: Putative UAXs, Description = UDP-apiose/xylose synthase, PFAM = PF01370)' T
'10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf06081_345628-354280' '(at1g08200 : 733.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 382.0) no description available & (gnl|cdd|84032 : 263.0) no description available & (reliability: 1466.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase, PFAM = PF01370)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'nbv0.3scaffold1712_40655-44094' '(gnl|cdd|37877 : 930.0) no description available & (at5g15490 : 917.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 915.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 354.0) no description available & (reliability: 1834.0) & (original description: Putative UGD2, Description = UDP-glucose 6-dehydrogenase 2, PFAM = PF03720;PF03721;PF00984)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben044scf00039500ctg001_1119-4558' '(gnl|cdd|37877 : 921.0) no description available & (at5g15490 : 915.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 910.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 356.0) no description available & (reliability: 1830.0) & (original description: Putative UGD3, Description = UDP-glucose 6-dehydrogenase 3, PFAM = PF03721;PF00984;PF03720)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf03819_147537-150976' '(gnl|cdd|37877 : 927.0) no description available & (at5g15490 : 923.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 919.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 359.0) no description available & (reliability: 1846.0) & (original description: Putative UGD3, Description = UDP-glucose 6-dehydrogenase 3, PFAM = PF00984;PF03720;PF03721)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf08002_235828-239267' '(gnl|cdd|37877 : 925.0) no description available & (at5g15490 : 921.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 916.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 356.0) no description available & (reliability: 1842.0) & (original description: Putative ugdh, Description = UDP-glucose 6-dehydrogenase, PFAM = PF00984;PF03720;PF03721)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf08721_123274-126713' '(gnl|cdd|37877 : 901.0) no description available & (q96558|ugdh_soybn : 883.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at3g29360 : 875.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31208 : 351.0) no description available & (reliability: 1750.0) & (original description: Putative kiwi, Description = UDP-glucose 6-dehydrogenase, PFAM = PF03720;PF00984;PF03721)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf09554_54814-58253' '(gnl|cdd|37877 : 931.0) no description available & (at3g29360 : 916.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q96558|ugdh_soybn : 914.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 354.0) no description available & (reliability: 1832.0) & (original description: Putative UGD2, Description = UDP-glucose 6-dehydrogenase 2, PFAM = PF03721;PF00984;PF03720)' T
'10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf11806_33929-37368' '(gnl|cdd|37877 : 904.0) no description available & (q96558|ugdh_soybn : 888.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at3g29360 : 877.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31208 : 352.0) no description available & (reliability: 1754.0) & (original description: Putative UGD1, Description = UDP-glucose 6-dehydrogenase 1, PFAM = PF03721;PF03720;PF00984)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'nbv0.5scaffold7595_1-3230' '(at3g46440 : 602.0) encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-XYL synthase 5 (UXS5); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3 (TAIR:AT5G59290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36642 : 525.0) no description available & (gnl|cdd|30800 : 210.0) no description available & (q2r1v8|gme2_orysa : 112.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1204.0) & (original description: Putative rfbB, Description = NAD-dependent epimerase/dehydratase, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf00059_252207-263947' '(at3g53520 : 655.0) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT analysis. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-glucuronic acid decarboxylase 1 (UXS1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.2). & (gnl|cdd|36642 : 542.0) no description available & (gnl|cdd|30800 : 216.0) no description available & (q338b5|gme1_orysa : 99.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1310.0) & (original description: Putative UXS1, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf00669_84515-94006' '(at3g53520 : 650.0) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT analysis. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-glucuronic acid decarboxylase 1 (UXS1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.2). & (gnl|cdd|36642 : 544.0) no description available & (gnl|cdd|30800 : 217.0) no description available & (q338b5|gme1_orysa : 103.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative UXS1, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf05147_106488-114264' '(at2g47650 : 555.0) encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-xylose synthase 4 (UXS4); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 484.0) no description available & (gnl|cdd|30800 : 166.0) no description available & (q2r1v8|gme2_orysa : 103.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1110.0) & (original description: Putative rfbB, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf09403_47785-55838' '(at3g62830 : 716.0) encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, dTDP-glucose 4,6-dehydratase activity, catalytic activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: plasma membrane, Golgi membrane, membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36642 : 554.0) no description available & (gnl|cdd|30800 : 205.0) no description available & (q338b5|gme1_orysa : 113.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative UXS2, Description = UDP-glucuronic acid decarboxylase 2, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf10015_24099-29198' '(at2g28760 : 589.0) UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 45408 Blast hits to 45356 proteins in 3037 species: Archae - 861; Bacteria - 26677; Metazoa - 782; Fungi - 385; Plants - 1435; Viruses - 88; Other Eukaryotes - 15180 (source: NCBI BLink). & (gnl|cdd|36642 : 528.0) no description available & (gnl|cdd|30800 : 210.0) no description available & (q2r1v8|gme2_orysa : 104.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1178.0) & (original description: Putative UXS6, Description = UDP-glucuronic acid decarboxylase 6, PFAM = PF16363)' T
'10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf13118_119849-124599' '(at3g62830 : 692.0) encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, dTDP-glucose 4,6-dehydratase activity, catalytic activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: plasma membrane, Golgi membrane, membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36642 : 553.0) no description available & (gnl|cdd|30800 : 209.0) no description available & (q338b5|gme1_orysa : 113.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1384.0) & (original description: Putative rfbB, Description = dTDP-glucose 4,6-dehydratase, PFAM = PF16363)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben044scf00009218ctg007_4387-7818' '(at3g23820 : 631.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 431.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 95.9) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1262.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf00603_855575-858879' '(at4g00110 : 675.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 438.0) no description available & (gnl|cdd|30800 : 200.0) no description available & (q43070|gale1_pea : 103.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1350.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02104_188923-192679' '(at3g23820 : 628.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 423.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 97.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1256.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02494_729488-732711' '(at4g00110 : 572.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 432.0) no description available & (gnl|cdd|30800 : 195.0) no description available & (q43070|gale1_pea : 96.3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1144.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02569_120802-124136' '(at1g02000 : 579.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink). & (gnl|cdd|36585 : 425.0) no description available & (gnl|cdd|30800 : 194.0) no description available & (q43070|gale1_pea : 87.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1158.0) & (original description: Putative GAE5, Description = UDP-glucuronate 4-epimerase 5, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf05109_242928-246220' '(at4g30440 : 732.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 1 (GAE1); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43669 Blast hits to 43658 proteins in 3000 species: Archae - 796; Bacteria - 26151; Metazoa - 773; Fungi - 435; Plants - 1177; Viruses - 35; Other Eukaryotes - 14302 (source: NCBI BLink). & (gnl|cdd|36585 : 439.0) no description available & (gnl|cdd|30800 : 203.0) no description available & (q43070|gale1_pea : 99.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1464.0) & (original description: Putative GAE1, Description = UDP-glucuronate 4-epimerase 1, PFAM = PF16363)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf05317_68577-71884' '(at4g00110 : 657.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 438.0) no description available & (gnl|cdd|30800 : 201.0) no description available & (q43070|gale1_pea : 102.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1314.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf10608_403130-406479' '(at3g23820 : 631.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 430.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 95.1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1262.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf11361_17204-20508' '(at4g00110 : 702.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 444.0) no description available & (gnl|cdd|30800 : 199.0) no description available & (q43070|gale1_pea : 107.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1404.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf11408_261934-265211' '(at4g30440 : 749.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 1 (GAE1); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43669 Blast hits to 43658 proteins in 3000 species: Archae - 796; Bacteria - 26151; Metazoa - 773; Fungi - 435; Plants - 1177; Viruses - 35; Other Eukaryotes - 14302 (source: NCBI BLink). & (gnl|cdd|36585 : 427.0) no description available & (gnl|cdd|30800 : 201.0) no description available & (q43070|gale1_pea : 85.9) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1498.0) & (original description: Putative GAE1, Description = UDP-glucuronate 4-epimerase 1, PFAM = PF01370)' T
'10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf12414_56026-59249' '(at1g02000 : 588.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink). & (gnl|cdd|36585 : 430.0) no description available & (gnl|cdd|30800 : 198.0) no description available & (q43070|gale1_pea : 94.4) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1176.0) & (original description: Putative uge, Description = Uridine diphosphate galacturonate 4-epimerase, PFAM = PF01370)' T
'10.1.7' 'cell wall.precursor synthesis.GMD' 'niben044scf00022257ctg000_1-2724' '(at3g51160 : 657.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 579.0) no description available & (gnl|cdd|31286 : 498.0) no description available & (reliability: 1314.0) & (original description: Putative MUR1, Description = GDP-mannose 4,6 dehydratase 2, PFAM = PF16363)' T
'10.1.7' 'cell wall.precursor synthesis.GMD' 'niben101scf03735_560296-563970' '(at3g51160 : 659.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 578.0) no description available & (gnl|cdd|31286 : 497.0) no description available & (reliability: 1318.0) & (original description: Putative MUR1, Description = GDP-mannose 4,6 dehydratase 2, PFAM = PF16363)' T
'10.1.7' 'cell wall.precursor synthesis.GMD' 'niben101scf05201_606526-609498' '(at3g51160 : 657.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 586.0) no description available & (gnl|cdd|31286 : 501.0) no description available & (reliability: 1314.0) & (original description: Putative gmd, Description = GDP-mannose 4,6-dehydratase, PFAM = PF16363)' T
'10.1.8' 'cell wall.precursor synthesis.GER' 'niben101scf03736_192858-195796' '(at1g17890 : 546.0) GER2; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 (TAIR:AT1G73250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67wr2|fcl1_orysa : 516.0) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) - Oryza sativa (Rice) & (gnl|cdd|36644 : 444.0) no description available & (gnl|cdd|85412 : 198.0) no description available & (reliability: 1092.0) & (original description: Putative GER2, Description = Putative GDP-L-fucose synthase 2, PFAM = PF01370)' T
'10.1.8' 'cell wall.precursor synthesis.GER' 'niben101scf08538_194584-197522' '(at1g17890 : 545.0) GER2; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 (TAIR:AT1G73250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67wr2|fcl1_orysa : 511.0) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) - Oryza sativa (Rice) & (gnl|cdd|36644 : 443.0) no description available & (gnl|cdd|85412 : 199.0) no description available & (reliability: 1090.0) & (original description: Putative fcl, Description = GDP-L-fucose synthase, PFAM = PF01370)' T
'10.1.9' 'cell wall.precursor synthesis.MUR4' 'nbv0.5scaffold5466_3257-131139' '(at1g30620 : 194.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 193.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 148.0) no description available & (gnl|cdd|31284 : 146.0) no description available & (reliability: 388.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T
'10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf00271_601085-607392' '(at1g30620 : 743.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 685.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 464.0) no description available & (gnl|cdd|31284 : 397.0) no description available & (reliability: 1486.0) & (original description: Putative MUR4, Description = UDP-arabinose 4-epimerase 1, PFAM = PF16363)' T
'10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf03539_10375-12833' '(at1g30620 : 189.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 187.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 143.0) no description available & (gnl|cdd|31284 : 141.0) no description available & (reliability: 378.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T
'10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf11138_229101-235138' '(at1g30620 : 737.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h930|arae1_orysa : 677.0) Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1) (OsUEL-1) - Oryza sativa (Rice) & (gnl|cdd|36585 : 462.0) no description available & (gnl|cdd|31284 : 400.0) no description available & (reliability: 1474.0) & (original description: Putative MUR4, Description = UDP-arabinose 4-epimerase 1, PFAM = PF16363)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'nbv0.5scaffold5630_129692-133778' '(at1g78570 : 1235.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 534.0) no description available & (gnl|cdd|31285 : 384.0) no description available & (q8h0b6|arae2_orysa : 105.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2470.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF16363;PF04321)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf00160_919301-923403' '(at1g78570 : 1246.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 526.0) no description available & (gnl|cdd|31285 : 376.0) no description available & (q8h0b6|arae2_orysa : 107.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2492.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF04321;PF16363)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf01892_190630-194513' '(at1g78570 : 1242.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 529.0) no description available & (gnl|cdd|31285 : 376.0) no description available & (q8h0b6|arae2_orysa : 105.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2484.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF04321;PF16363)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf01983_646145-651150' '(at1g78570 : 1240.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 537.0) no description available & (gnl|cdd|31285 : 384.0) no description available & (q8h0b6|arae2_orysa : 107.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2480.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321;PF16363)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf08156_1019225-1024051' '(at1g78570 : 1086.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 475.0) no description available & (gnl|cdd|31285 : 373.0) no description available & (q8h0b2|arae3_orysa : 104.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (reliability: 2172.0) & (original description: Putative rfbB, Description = dTDP-D-glucose 4,6-dehydratase, PFAM = PF16363;PF04321)' T
'10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf16022_537493-541551' '(at1g63000 : 538.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|31288 : 83.8) no description available & (reliability: 1026.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321)' T
'10.1.11' 'cell wall.precursor synthesis.UER' 'niben101scf16022_537493-541551' '(at1g63000 : 538.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|31288 : 83.8) no description available & (reliability: 1076.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321)' T
'10.1.12' 'cell wall.precursor synthesis.KDO pathway' '' ''
'10.1.12.1' 'cell wall.precursor synthesis.KDO pathway.arabinose-5-phosphate isomerase' 'niben044scf00000264ctg011_12253-17737' '(at3g54690 : 494.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink). & (gnl|cdd|83570 : 196.0) no description available & (reliability: 988.0) & (original description: Putative SETH3, Description = Probable arabinose 5-phosphate isomerase, PFAM = PF01380;PF00571;PF00571)' T
'10.1.12.1' 'cell wall.precursor synthesis.KDO pathway.arabinose-5-phosphate isomerase' 'niben101scf06687_214631-219932' '(at3g54690 : 492.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink). & (gnl|cdd|83570 : 198.0) no description available & (reliability: 984.0) & (original description: Putative SETH3, Description = Probable arabinose 5-phosphate isomerase, PFAM = PF01380;PF00571;PF00571)' T
'10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben044scf00003596ctg009_2803-7007' '(at1g79500 : 392.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 385.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 327.0) no description available & (reliability: 784.0) & (original description: Putative kdsA, Description = 3-deoxy-D-manno-2-octulosonic acid-8-phosphate, PFAM = PF00793)' T
'10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben044scf00011838ctg013_4024-12930' '(at1g79500 : 520.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 511.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 401.0) no description available & (reliability: 1040.0) & (original description: Putative kdsA, Description = 3-desoxy-D-manno octulosonic acid-8-phosphate synthase, PFAM = PF00793)' T
'10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben101scf01154_31253-35765' '(at1g79500 : 387.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 382.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 325.0) no description available & (reliability: 774.0) & (original description: Putative kdsA, Description = 3-deoxy-D-manno-2-octulosonic acid-8-phosphate, PFAM = PF00793)' T
'10.1.12.3' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Phosphatase' '' ''
'10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'nbv0.5scaffold5830_29456-33684' '(at1g53000 : 233.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 181.0) no description available & (reliability: 466.0) & (original description: Putative cks, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, PFAM = PF02348)' T
'10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'niben044scf00013184ctg001_394-5769' '(at1g53000 : 433.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 326.0) no description available & (reliability: 866.0) & (original description: Putative KDSB, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, PFAM = PF02348)' T
'10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'niben101scf04989_59524-87201' '(at1g53000 : 459.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 321.0) no description available & (reliability: 918.0) & (original description: Putative KDSB, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, PFAM = PF02348)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'nbv0.5scaffold6466_14910-27421' '(at1g67070 : 495.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 480.0) no description available & (gnl|cdd|85328 : 328.0) no description available & (reliability: 990.0) & (original description: Putative PMI2, Description = Mannose-6-phosphate isomerase 2, PFAM = PF01238)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben044scf00003816ctg015_25006-29912' '(at3g02570 : 507.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 497.0) no description available & (gnl|cdd|85328 : 320.0) no description available & (reliability: 1014.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf00894_318918-329336' '(at3g02570 : 502.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 496.0) no description available & (gnl|cdd|85328 : 322.0) no description available & (reliability: 1004.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf02381_377502-384930' '(at1g67070 : 499.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 491.0) no description available & (gnl|cdd|85328 : 312.0) no description available & (reliability: 998.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf03015_747331-754011' '(at1g67070 : 492.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 482.0) no description available & (gnl|cdd|85328 : 330.0) no description available & (reliability: 984.0) & (original description: Putative mpi, Description = Mannose-6-phosphate isomerase, PFAM = PF01238)' T
'10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf10375_231513-246142' '(at3g02570 : 502.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 492.0) no description available & (gnl|cdd|85328 : 322.0) no description available & (reliability: 1004.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T
'10.1.21' 'cell wall.precursor synthesis.phosphomannomutase' 'niben101scf04895_36267-42144' '(at2g45790 : 426.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|38399 : 389.0) no description available & (gnl|cdd|86298 : 349.0) no description available & (reliability: 852.0) & (original description: Putative pmm, Description = Phosphomannomutase, PFAM = PF03332)' T
'10.1.21' 'cell wall.precursor synthesis.phosphomannomutase' 'niben101scf07459_126085-132534' '(at2g45790 : 427.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|38399 : 392.0) no description available & (gnl|cdd|86298 : 351.0) no description available & (reliability: 854.0) & (original description: Putative pmm, Description = Phosphomannomutase, PFAM = PF03332)' T
'10.1.30' 'cell wall.precursor synthesis.sugar kinases' '' ''
'10.1.30.1' 'cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase' 'nbv0.3scaffold31813_7274-18782' '(at3g10700 : 510.0) Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.; galacturonic acid kinase (GalAK); FUNCTIONS IN: ATP binding, galactokinase activity, galacturonokinase activity; INVOLVED IN: carbohydrate phosphorylation, D-galacturonate metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 3493 Blast hits to 3446 proteins in 1360 species: Archae - 42; Bacteria - 2414; Metazoa - 241; Fungi - 181; Plants - 121; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|30502 : 183.0) no description available & (gnl|cdd|35850 : 168.0) no description available & (reliability: 1020.0) & (original description: Putative GALAK, Description = Galacturonokinase, PFAM = PF00288;PF08544)' T
'10.1.30.1' 'cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase' 'niben101scf03284_309346-322328' '(at3g10700 : 568.0) Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.; galacturonic acid kinase (GalAK); FUNCTIONS IN: ATP binding, galactokinase activity, galacturonokinase activity; INVOLVED IN: carbohydrate phosphorylation, D-galacturonate metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 3493 Blast hits to 3446 proteins in 1360 species: Archae - 42; Bacteria - 2414; Metazoa - 241; Fungi - 181; Plants - 121; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|35850 : 208.0) no description available & (gnl|cdd|30502 : 205.0) no description available & (reliability: 1136.0) & (original description: Putative GALAK, Description = Galacturonokinase, PFAM = PF00288;PF10509;PF08544)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'nbv0.5scaffold52_112317-142131' '(at4g16130 : 1406.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 381.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2812.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF10509;PF13528;PF00288)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'nbv0.5scaffold82_15511-617401' '(at4g16130 : 457.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben044scf00023719ctg001_17798-25532' '(at4g16130 : 374.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 130.0) no description available & (reliability: 748.0) & (original description: Putative ARA, Description = L-arabinokinase, PFAM = PF13528)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben044scf00043991ctg000_166-5723' '(at4g16130 : 620.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|30502 : 116.0) no description available & (reliability: 1240.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544;PF00288)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf00087_58441-83535' '(at4g16130 : 1589.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 424.0) no description available & (gnl|cdd|81444 : 129.0) no description available & (reliability: 3178.0) & (original description: Putative galK, Description = L-arabinokinase, PFAM = PF10509;PF00288;PF13528;PF08544)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf00360_268896-293424' '(at4g16130 : 1597.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 424.0) no description available & (gnl|cdd|30502 : 132.0) no description available & (reliability: 3194.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509;PF08544)' T
'10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf03540_33750-66975' '(at4g16130 : 1434.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 383.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2868.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509)' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'nbv0.3scaffold36904_10986-16905' '(at3g01640 : 206.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative gkup, Description = GHMP kinase, PFAM = )' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben044scf00031000ctg002_1-4550' '(at3g01640 : 463.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative GLAK2, Description = GLAK2, PFAM = PF00288)' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben044scf00037492ctg003_2883-10031' '(at3g01640 : 181.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative gkup, Description = Glucuronokinase 1, PFAM = )' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf00046_289545-295464' '(at3g01640 : 345.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative gkup, Description = GHMP kinase, PFAM = PF00288)' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf03766_867968-874670' '(at3g01640 : 496.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 992.0) & (original description: Putative GLCAK1, Description = Glucuronokinase 1, PFAM = PF00288)' T
'10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf14755_110960-115000' '(at3g01640 : 171.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative MVK, Description = Glucuronokinase 1, PFAM = )' T
'10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold688_9364-13980' '(at4g07960 : 1052.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2104.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold42143_11418-16506' '(at5g49720 : 929.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 891.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 454.0) no description available & (reliability: 1858.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T
'10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold48664_1971-6647' '(at4g07960 : 1027.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 135.0) no description available & (reliability: 2054.0) & (original description: Putative CSLC3, Description = Cellulose synthase-like family C3 protein, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00008093ctg005_1-2069' '(at3g07330 : 270.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative CSLC2, Description = Xyloglucan glycosyltransferase, PFAM = )' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00014844ctg024_21161-26262' '(at5g49720 : 887.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 845.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 451.0) no description available & (reliability: 1774.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00017685ctg008_5306-9641' '(at5g03760 : 511.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00028575ctg004_31309-35981' '(q7xuk4|gun12_orysa : 375.0) Endoglucanase 12 (EC 3.2.1.4) (Endo-1,4-beta glucanase 12) (OsGLU3) - Oryza sativa (Rice) & (at1g65610 : 360.0) KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 353.0) no description available & (reliability: 690.0) & (original description: Putative CEL, Description = Endoglucanase, PFAM = PF00759)' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00031498ctg000_1862-9860' '(at3g07330 : 715.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|31408 : 128.0) no description available & (reliability: 1430.0) & (original description: Putative cslA1, Description = Xyloglucan glycosyltransferase, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben044scf00039134ctg000_7685-13282' '(at4g31590 : 1004.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2008.0) & (original description: Putative CSLC5, Description = Probable xyloglucan glycosyltransferase 5, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf00905_617005-623028' '(at4g31590 : 1022.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2044.0) & (original description: Putative CSLC5, Description = Probable xyloglucan glycosyltransferase 5, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf01108_679082-685651' '(at5g22740 : 778.0) encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein; cellulose synthase-like A02 (CSLA02); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5133 Blast hits to 5129 proteins in 1484 species: Archae - 200; Bacteria - 4017; Metazoa - 35; Fungi - 91; Plants - 482; Viruses - 11; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|31408 : 121.0) no description available & (reliability: 1556.0) & (original description: Putative CSLA2, Description = Glucomannan 4-beta-mannosyltransferase 2, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf01481_14812-22147' '(at5g03760 : 353.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF00535)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf02714_47807-55560' '(at5g49720 : 908.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 864.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 455.0) no description available & (reliability: 1816.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf03753_13711-19065' '(at5g49720 : 932.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 894.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 452.0) no description available & (reliability: 1864.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf03991_4387-12493' '(at5g03760 : 905.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 124.0) no description available & (reliability: 1810.0) & (original description: Putative ManS, Description = Mannan synthase 1, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf04626_165875-170527' '(at3g28180 : 929.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C4 (CSLC04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5595 Blast hits to 5589 proteins in 1569 species: Archae - 192; Bacteria - 4449; Metazoa - 13; Fungi - 97; Plants - 511; Viruses - 16; Other Eukaryotes - 317 (source: NCBI BLink). & (gnl|cdd|31408 : 148.0) no description available & (reliability: 1858.0) & (original description: Putative cslA1, Description = Xyloglucan glycosyltransferase, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf04700_789917-794593' '(at4g07960 : 1028.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 134.0) no description available & (reliability: 2056.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf05392_103002-111060' '(at5g03760 : 912.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 123.0) no description available & (reliability: 1824.0) & (original description: Putative CSLA9, Description = Glucomannan 4-beta-mannosyltransferase 9, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf05697_731701-740817' '(at5g03760 : 773.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 122.0) no description available & (reliability: 1546.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf06125_185774-192004' '(at5g03760 : 842.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 126.0) no description available & (reliability: 1684.0) & (original description: Putative CSLA3, Description = Probable mannan synthase 3, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf06280_185134-190039' '(at5g22130 : 501.0) member of Glycosyltransferase Family- 50; PEANUT 1 (PNT1); FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups, alpha-1,4-mannosyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process, cellulose biosynthetic process, plant-type cell wall biogenesis, embryo development, cell division; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, DXD (InterPro:IPR007704). & (q500w7|pigm_arath : 501.0) GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) (Protein PEANUT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|39096 : 329.0) no description available & (gnl|cdd|86771 : 222.0) no description available & (reliability: 1002.0) & (original description: Putative PIGM, Description = GPI mannosyltransferase 1, PFAM = PF05007)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf07070_169132-173785' '(at3g28180 : 944.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C4 (CSLC04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5595 Blast hits to 5589 proteins in 1569 species: Archae - 192; Bacteria - 4449; Metazoa - 13; Fungi - 97; Plants - 511; Viruses - 16; Other Eukaryotes - 317 (source: NCBI BLink). & (gnl|cdd|31408 : 149.0) no description available & (reliability: 1888.0) & (original description: Putative CSLC4, Description = Xyloglucan glycosyltransferase 4, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf10224_192929-198895' '(at5g22740 : 831.0) encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein; cellulose synthase-like A02 (CSLA02); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5133 Blast hits to 5129 proteins in 1484 species: Archae - 200; Bacteria - 4017; Metazoa - 35; Fungi - 91; Plants - 482; Viruses - 11; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|31408 : 127.0) no description available & (reliability: 1662.0) & (original description: Putative CSLA2, Description = Glucomannan 4-beta-mannosyltransferase 2, PFAM = PF13632)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf11168_45096-50829' '(at5g03760 : 762.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 123.0) no description available & (reliability: 1524.0) & (original description: Putative ManS, Description = Mannan synthase 1, PFAM = PF13641)' T
'10.2' 'cell wall.cellulose synthesis' 'niben101scf14843_17346-21958' '(at4g07960 : 1070.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 143.0) no description available & (reliability: 2140.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold8886_14231-20695' '(at3g03050 : 1961.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1372.0) no description available & (reliability: 3922.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF14570;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold11253_2745-9145' '(at1g02730 : 1646.0) Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.; cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|67186 : 1304.0) no description available & (reliability: 3292.0) & (original description: Putative CSLD5, Description = Cellulose synthase-like protein D5, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold17644_20911-30434' '(at4g23990 : 235.0) encodes a protein similar to cellulose synthase; cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 229.0) no description available & (reliability: 470.0) & (original description: Putative CSLH, Description = Cellulose synthase-like protein D3, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold18045_24841-33340' '(at5g64740 : 1729.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1496.0) no description available & (reliability: 3458.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold22699_11391-21406' '(at4g32410 : 1922.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1551.0) no description available & (reliability: 3844.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold26906_6741-14999' '(at5g64740 : 1721.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1494.0) no description available & (reliability: 3442.0) & (original description: Putative CESA3, Description = Probable cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold50950_6606-14316' '(at5g64740 : 1701.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1458.0) no description available & (reliability: 3402.0) & (original description: Putative cesA4, Description = Cellulose synthase, PFAM = PF03552;PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold159_648758-658353' '(at5g64740 : 1756.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1516.0) no description available & (reliability: 3512.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold540_261593-269293' '(at1g55850 : 699.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 313.0) no description available & (reliability: 1398.0) & (original description: Putative CSLE6, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2279_226008-236159' '(at4g24000 : 504.0) encodes a protein similar to cellulose synthase; cellulose synthase like G2 (CSLG2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2950 Blast hits to 2333 proteins in 442 species: Archae - 3; Bacteria - 792; Metazoa - 2; Fungi - 20; Plants - 2101; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|67186 : 292.0) no description available & (reliability: 1008.0) & (original description: Putative Sb03g047220, Description = Putative uncharacterized protein Sb03g047220, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2391_326414-340312' '(at1g55850 : 791.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 304.0) no description available & (gnl|cdd|36905 : 203.0) no description available & (reliability: 1582.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E1, PFAM = PF01105;PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2412_236489-294361' '(at4g24010 : 378.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 343.0) no description available & (reliability: 756.0) & (original description: Putative glysoja_033236, Description = Cellulose synthase-like protein G1, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2482_249790-261581' '(at5g05170 : 1858.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1562.0) no description available & (reliability: 3716.0) & (original description: Putative CESA3, Description = Cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold4753_29429-46049' '(at1g55850 : 662.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 329.0) no description available & (reliability: 1324.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold5414_12931-21329' '(at5g44030 : 1621.0) Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; cellulose synthase A4 (CESA4); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, defense response to bacterium, defense response to fungus, secondary cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 3263 Blast hits to 2832 proteins in 640 species: Archae - 9; Bacteria - 1071; Metazoa - 1; Fungi - 31; Plants - 2051; Viruses - 7; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|67186 : 1558.0) no description available & (reliability: 3242.0) & (original description: Putative CESA4, Description = Cellulose synthase A catalytic subunit 4 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold9700_3751-14866' '(at2g32540 : 699.0) encodes a gene similar to cellulose synthase; cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|67186 : 506.0) no description available & (reliability: 1398.0) & (original description: Putative CSLH1, Description = Cellulose synthase-like protein H1, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00005464ctg008_1-7362' '(at5g05170 : 1493.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1213.0) no description available & (reliability: 2986.0) & (original description: Putative CES, Description = Cellulose synthase A, PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00007839ctg015_1656-8023' '(at3g03050 : 1977.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1360.0) no description available & (reliability: 3954.0) & (original description: Putative cslD1, Description = Cellulose synthase, PFAM = PF03552;PF14570)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00017162ctg003_1476-6056' '(at1g55850 : 115.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 98.1) no description available & (reliability: 230.0) & (original description: Putative CSLB1, Description = Cellulose synthase-like protein H1, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00017685ctg008_5306-9641' '(at5g03760 : 511.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13632)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00019760ctg008_20447-26889' '(at3g03050 : 1991.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1372.0) no description available & (reliability: 3982.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf00581_20479-26893' '(at4g18780 : 1593.0) Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; IRREGULAR XYLEM 1 (IRX1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 7 processes; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase A4 (TAIR:AT5G44030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67186 : 1544.0) no description available & (reliability: 3186.0) & (original description: Putative CESA8, Description = Cellulose synthase A catalytic subunit 8 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01071_302574-311000' '(at5g64740 : 1734.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1496.0) no description available & (reliability: 3468.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01146_918255-926213' '(at2g33100 : 1582.0) encodes a gene similar to cellulose synthase; cellulose synthase-like D1 (CSLD1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen germination, plant-type cell wall biogenesis, polysaccharide biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3587 Blast hits to 2817 proteins in 647 species: Archae - 12; Bacteria - 1535; Metazoa - 3; Fungi - 28; Plants - 1916; Viruses - 7; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1260.0) no description available & (reliability: 3164.0) & (original description: Putative CSLD1, Description = Cellulose synthase-like protein D1, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01382_292829-300544' '(at5g17420 : 1758.0) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).; IRREGULAR XYLEM 3 (IRX3); FUNCTIONS IN: cellulose synthase activity; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, secondary cell wall biogenesis, rhamnogalacturonan I side chain metabolic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1518.0) no description available & (reliability: 3516.0) & (original description: Putative CESA7, Description = Cellulose synthase A catalytic subunit 7 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01481_14812-22147' '(at5g03760 : 353.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF00535)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01623_675301-681701' '(at1g02730 : 1643.0) Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.; cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|67186 : 1304.0) no description available & (reliability: 3286.0) & (original description: Putative CSLD5, Description = Cellulose synthase-like protein D5, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01849_377823-384896' '(at1g55850 : 793.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 304.0) no description available & (reliability: 1586.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E1, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf02476_293039-301463' '(at4g24010 : 393.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 347.0) no description available & (reliability: 786.0) & (original description: Putative PGSC0003DMG400011752, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03059_6429-18742' '(at4g24010 : 480.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 442.0) no description available & (reliability: 960.0) & (original description: Putative glysoja_033236, Description = Cellulose synthase-like protein G1, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03222_177298-188133' '(at4g32410 : 1919.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1546.0) no description available & (reliability: 3838.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03326_103576-110384' '(at3g03050 : 2001.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1368.0) no description available & (reliability: 4002.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03365_523777-532406' '(at5g44030 : 1617.0) Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; cellulose synthase A4 (CESA4); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, defense response to bacterium, defense response to fungus, secondary cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 3263 Blast hits to 2832 proteins in 640 species: Archae - 9; Bacteria - 1071; Metazoa - 1; Fungi - 31; Plants - 2051; Viruses - 7; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|67186 : 1559.0) no description available & (reliability: 3234.0) & (original description: Putative CESA4, Description = Cellulose synthase A catalytic subunit 4 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf04405_5586-17980' '(at2g32540 : 442.0) encodes a gene similar to cellulose synthase; cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|67186 : 342.0) no description available & (reliability: 884.0) & (original description: Putative At2g32530, Description = Putative cellulose synthase, PFAM = PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf04634_20216-29274' '(at2g21770 : 1645.0) cellulose synthase, related to CESA6.; cellulose synthase A9 (CESA9); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: seed coat development, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A2 (TAIR:AT4G39350.1); Has 3186 Blast hits to 2819 proteins in 625 species: Archae - 9; Bacteria - 1125; Metazoa - 1; Fungi - 19; Plants - 1939; Viruses - 5; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|67186 : 1489.0) no description available & (reliability: 3290.0) & (original description: Putative Z632, Description = Cellulose synthase, PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf05697_731701-740817' '(at5g03760 : 773.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 122.0) no description available & (reliability: 1456.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13641)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06125_185774-192004' '(at5g03760 : 842.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 126.0) no description available & (reliability: 1590.0) & (original description: Putative CSLA3, Description = Probable mannan synthase 3, PFAM = PF13641)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06375_329667-336308' '(gnl|cdd|67186 : 1472.0) no description available & (at5g64740 : 1461.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2922.0) & (original description: Putative CESA3, Description = Probable cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06423_208681-227006' '(at1g55850 : 665.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 334.0) no description available & (reliability: 1330.0) & (original description: Putative CSLE6, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06504_2587-10860' '(at4g23990 : 817.0) encodes a protein similar to cellulose synthase; cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 414.0) no description available & (reliability: 1634.0) & (original description: Putative CSLG3, Description = Cellulose synthase-like protein G3, PFAM = PF03552;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06966_84997-92886' '(at5g64740 : 1762.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1512.0) no description available & (reliability: 3524.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf07824_6453-16329' '(at4g32410 : 1924.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1552.0) no description available & (reliability: 3848.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf09867_279470-287816' '(at4g38190 : 1845.0) encodes a gene similar to cellulose synthase; cellulose synthase like D4 (CSLD4); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3503 Blast hits to 2866 proteins in 674 species: Archae - 22; Bacteria - 1611; Metazoa - 5; Fungi - 10; Plants - 1761; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|67186 : 1303.0) no description available & (reliability: 3690.0) & (original description: Putative CSLD4, Description = Cellulose synthase-like protein D4, PFAM = PF03552;PF03552;PF14570)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf14115_225303-231785' '(at3g03050 : 1955.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1369.0) no description available & (reliability: 3910.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T
'10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf14566_107589-115490' '(at5g17420 : 1741.0) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).; IRREGULAR XYLEM 3 (IRX3); FUNCTIONS IN: cellulose synthase activity; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, secondary cell wall biogenesis, rhamnogalacturonan I side chain metabolic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1524.0) no description available & (reliability: 3482.0) & (original description: Putative CESA7, Description = Cellulose synthase A catalytic subunit 7 [UDP-forming], PFAM = PF14569;PF03552)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.3scaffold9046_35606-41740' '(at5g15630 : 723.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 655.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 201.0) no description available & (reliability: 1446.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.5scaffold1165_410185-415178' '(at5g60920 : 631.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 617.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1262.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.5scaffold3145_268522-271124' '(at5g60920 : 284.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 268.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 177.0) no description available & (reliability: 568.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00000376ctg011_1757-5531' '(q6z4g8|cobl1_orysa : 385.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at5g60920 : 374.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 105.0) no description available & (reliability: 748.0) & (original description: Putative BC1L6, Description = COBRA-like protein 1, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00029554ctg008_281-4816' '(at5g60920 : 602.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 583.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1204.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00034948ctg002_1-4448' '(at3g20580 : 813.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 271.0) no description available & (q6z4g7|cobl6_orysa : 129.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00036180ctg001_27739-35405' '(at3g20580 : 743.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 254.0) no description available & (q7xr91|cobl7_orysa : 141.0) COBRA-like 7 protein precursor (BRITTLE CULM1-like 3 protein) - Oryza sativa (Rice) & (reliability: 1486.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00135_60022-79283' '(q6z4g8|cobl1_orysa : 427.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at5g60920 : 412.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 108.0) no description available & (reliability: 824.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00135_60151-79394' '(q6z4g8|cobl1_orysa : 400.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at3g02210 : 379.0) COBRA-like protein 1 precursor (COBL1); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 2 precursor (TAIR:AT3G29810.1); Has 380 Blast hits to 369 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 109.0) no description available & (reliability: 758.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00176_1040149-1044183' '(at3g20580 : 748.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 255.0) no description available & (q6z4g7|cobl6_orysa : 141.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1496.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00391_505315-510104' '(at3g20580 : 800.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 260.0) no description available & (q6z4g7|cobl6_orysa : 130.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1600.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf01970_699170-704294' '(at1g09790 : 506.0) COBRA-like protein 6 precursor (COBL6); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 376 Blast hits to 369 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 376; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 483.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 145.0) no description available & (reliability: 1012.0) & (original description: Putative COBL6, Description = COBRA-like protein 6, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf02289_558406-564812' '(at5g15630 : 723.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 655.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 201.0) no description available & (reliability: 1446.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf02945_91517-96817' '(at4g16120 : 815.0) putative membrane-anchored cell wall protein; COBRA-like protein-7 precursor (COBL7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, Golgi apparatus, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 8 precursor (TAIR:AT3G16860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 288.0) no description available & (q6z4g8|cobl1_orysa : 139.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (reliability: 1630.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf04339_222446-227758' '(at3g20580 : 818.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 271.0) no description available & (q6z4g7|cobl6_orysa : 129.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1636.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf05618_290977-296717' '(at5g60920 : 685.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 671.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 208.0) no description available & (reliability: 1370.0) & (original description: Putative COB, Description = Protein COBRA, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf06076_18853-22420' '(at5g60920 : 290.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 272.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 182.0) no description available & (reliability: 580.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_219557-223427' '(at5g15630 : 524.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 504.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 181.0) no description available & (reliability: 1048.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_233169-237700' '(at5g15630 : 710.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 670.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 192.0) no description available & (reliability: 1420.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_236969-242689' '(at5g60920 : 668.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 659.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 194.0) no description available & (reliability: 1336.0) & (original description: Putative COBL1, Description = COBRA-like protein 1, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf10887_3078-7920' '(at5g60920 : 711.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 689.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 205.0) no description available & (reliability: 1422.0) & (original description: Putative COB, Description = Protein COBRA, PFAM = PF04833)' T
'10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf13572_45127-50120' '(at5g60920 : 620.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 614.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1240.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T
'10.2.1001' 'cell wall degradation' 'ribose' 'cell wall degradation; minor CHO metabolism; auxin metabolism' M
'10.2.1002' 'cell wall degradation' 'ribonate' 'cell wall degradation; minor CHO metabolism; auxin metabolism' M
'10.2.1003' 'cell wall degradation' 'fucose' 'cell wall degradation' M
'10.2.1004' 'cell wall degradation' 'mannose' 'cell wall degradation; minor CHO metabolism' M
'10.2.1005' 'cell wall degradation' 'galactose' 'cell wall degradation; minor CHO metabolism' M
'10.2.1006' 'cell wall degradation' 'arabinose' 'cell wall degradation; minor CHO metabolism' M
'10.2.1007' 'cell wall degradation' 'galacturonate' 'cell wall degradation' M
'10.2.1008' 'cell wall degradation' 'glucosamine' 'cell wall degradation' M
'10.2.1009' 'cell wall degradation' 'glucosaminate' 'cell wall degradation' M
'10.2.1010' 'cell wall degradation' 'rhamnose' 'cell wall degradation; minor CHO metabolism' M
'10.2.1011' 'cell wall degradation' 'melibiose' 'cell wall degradation; minor CHO metabolism' M
'10.2.1012' 'cell wall degradation' 'levoglucosan' 'cell wall degradation, degradation of cellulose' M
'10.2.1013' 'cell wall degradation' 'hydroxyproline' 'cell wall degradation' M
'10.3' 'cell wall.hemicellulose synthesis' 'nbv0.3scaffold73_109378-114777' '(at5g03795 : 509.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 316.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 944.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold2082_212341-217992' '(at5g03795 : 511.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 313.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 946.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold3896_214289-220199' '(at5g62620 : 853.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 308.0) no description available & (gnl|cdd|85659 : 89.2) no description available & (reliability: 1706.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T
'10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold5912_481-6826' '(at5g20260 : 137.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11130.1); Has 1489 Blast hits to 1482 proteins in 115 species: Archae - 0; Bacteria - 12; Metazoa - 396; Fungi - 4; Plants - 968; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At3g42180, Description = Putative glycosyltransferase, PFAM = )' T
'10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold6869_11815-64812' '(at5g16890 : 406.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 110.0) no description available & (reliability: 812.0) & (original description: Putative AT5G16890, Description = Putative glucuronoxylan glucuronosyltransferase F8H, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben044scf00025657ctg000_14468-21251' '(at5g25310 : 497.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G03795.1); Has 1327 Blast hits to 1319 proteins in 106 species: Archae - 0; Bacteria - 6; Metazoa - 283; Fungi - 4; Plants - 949; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|36239 : 300.0) no description available & (gnl|cdd|66673 : 185.0) no description available & (reliability: 994.0) & (original description: Putative At5g25310, Description = Probable glycosyltransferase At5g25310, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00024_250572-255626' '(at5g62620 : 926.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 89.2) no description available & (reliability: 1852.0) & (original description: Putative BnaAnng17780D, Description = BnaAnng17780D protein, PFAM = PF01762;PF00337)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00063_1392567-1397028' '(at1g74680 : 538.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|66673 : 259.0) no description available & (gnl|cdd|36239 : 254.0) no description available & (reliability: 1004.0) & (original description: Putative BnaA07g22100D, Description = BnaA07g22100D protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00488_474652-480045' '(at5g62620 : 889.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 316.0) no description available & (gnl|cdd|84703 : 90.7) no description available & (reliability: 1778.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF00337;PF01762)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00519_39551-43340' '(q9m5q1|fut1_pea : 673.0) Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea) & (gnl|cdd|66898 : 633.0) no description available & (at2g03220 : 617.0) member of Glycosyltransferase Family- 37; fucosyltransferase 1 (FT1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: plant-type cell wall biogenesis, xyloglucan biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 7 (TAIR:AT1G14070.1); Has 329 Blast hits to 320 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 326; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1234.0) & (original description: Putative FT1, Description = Galactoside 2-alpha-L-fucosyltransferase, PFAM = PF03254)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00543_211920-217880' '(at5g62620 : 877.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 313.0) no description available & (gnl|cdd|85659 : 91.9) no description available & (reliability: 1754.0) & (original description: Putative GALT5, Description = Hydroxyproline O-galactosyltransferase GALT5, PFAM = PF00337;PF01762)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01063_449864-457223' '(at5g16890 : 671.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 239.0) no description available & (gnl|cdd|66673 : 196.0) no description available & (reliability: 1342.0) & (original description: Putative BnaA10g17600D, Description = BnaA10g17600D protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01459_33033-38996' '(at3g45400 : 614.0) exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36239 : 243.0) no description available & (gnl|cdd|66673 : 233.0) no description available & (reliability: 1228.0) & (original description: Putative BnaC03g55320D, Description = BnaC03g55320D protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01908_3129-7567' '(at1g74680 : 554.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 247.0) no description available & (reliability: 1024.0) & (original description: Putative At1g74680, Description = At1g74680/F1M20_36, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf02571_120588-125712' '(at5g62620 : 875.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 102.0) no description available & (reliability: 1750.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf03227_424087-428749' '(at3g45400 : 635.0) exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|66673 : 252.0) no description available & (gnl|cdd|36239 : 250.0) no description available & (reliability: 1270.0) & (original description: Putative BnaC03g55320D, Description = BnaC03g55320D protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf03326_119031-122653' '(at5g16890 : 236.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 107.0) no description available & (gnl|cdd|66673 : 100.0) no description available & (reliability: 472.0) & (original description: Putative ARAD1, Description = Arabinosyltransferase-like protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf07231_208436-213692' '(q9m5q1|fut1_pea : 739.0) Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea) & (at2g03220 : 674.0) member of Glycosyltransferase Family- 37; fucosyltransferase 1 (FT1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: plant-type cell wall biogenesis, xyloglucan biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 7 (TAIR:AT1G14070.1); Has 329 Blast hits to 320 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 326; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66898 : 660.0) no description available & (reliability: 1348.0) & (original description: Putative FT1, Description = Galactoside 2-alpha-L-fucosyltransferase, PFAM = PF03254)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf10492_62762-75570' '(at5g25310 : 459.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G03795.1); Has 1327 Blast hits to 1319 proteins in 106 species: Archae - 0; Bacteria - 6; Metazoa - 283; Fungi - 4; Plants - 949; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|36239 : 291.0) no description available & (gnl|cdd|66673 : 183.0) no description available & (reliability: 918.0) & (original description: Putative At5g25310, Description = Probable glycosyltransferase At5g25310, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 874.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T
'10.3' 'cell wall.hemicellulose synthesis' 'niben101scf16197_264164-277455' '(at5g03795 : 483.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 297.0) no description available & (gnl|cdd|66673 : 214.0) no description available & (reliability: 890.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T
'10.3.1' 'cell wall.hemicellulose synthesis.xyloglucan' '' ''
'10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf00063_595710-599503' '(at2g29040 : 546.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 533.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 305.0) no description available & (reliability: 1066.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T
'10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf09071_86984-90771' '(at2g20370 : 825.0) Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials.; MURUS 3 (MUR3); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G29040.1); Has 481 Blast hits to 480 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 455; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q8h038|katam_orysa : 794.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 317.0) no description available & (gnl|cdd|66673 : 316.0) no description available & (reliability: 1650.0) & (original description: Putative MUR3, Description = Xyloglucan galactosyltransferase MUR3, PFAM = PF03016)' T
'10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf11469_16054-19847' '(at2g29040 : 548.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 528.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 306.0) no description available & (reliability: 1064.0) & (original description: Putative Os03g0144800, Description = Xyloglucan galactosyltransferase KATAMARI1 homolog, PFAM = PF03016)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.3scaffold18719_19395-24400' '(at4g33330 : 616.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 206.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1232.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.5scaffold1053_686029-692419' '(at1g77130 : 850.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 261.0) no description available & (gnl|cdd|85496 : 130.0) no description available & (reliability: 1700.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.5scaffold4705_84343-90067' '(at2g37090 : 381.0) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.; IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits to 584 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|48336 : 210.0) no description available & (gnl|cdd|36689 : 203.0) no description available & (reliability: 762.0) & (original description: Putative IRX9, Description = Probable beta-1,4-xylosyltransferase IRX9, PFAM = PF03360)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00012222ctg009_770-7045' '(at4g33330 : 740.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 234.0) no description available & (gnl|cdd|85496 : 132.0) no description available & (reliability: 1480.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00043338ctg000_1-4345' '(at3g18660 : 850.0) Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.; plant glycogenin-like starch initiation protein 1 (PGSIP1); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 (TAIR:AT1G77130.1). & (gnl|cdd|37161 : 274.0) no description available & (gnl|cdd|85496 : 132.0) no description available & (reliability: 1700.0) & (original description: Putative GUX1, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 1, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00046432ctg005_1-4662' '(at5g54690 : 788.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1576.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00057887ctg002_43-7066' '(at1g77130 : 843.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 255.0) no description available & (gnl|cdd|85496 : 131.0) no description available & (reliability: 1686.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf00090_1261329-1268329' '(at4g33330 : 660.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 224.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1320.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf00972_39366-47849' '(at1g77130 : 881.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 260.0) no description available & (gnl|cdd|85496 : 130.0) no description available & (reliability: 1762.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf01032_239558-244563' '(at4g33330 : 643.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 214.0) no description available & (gnl|cdd|85496 : 125.0) no description available & (reliability: 1286.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf01191_160628-165590' '(at1g54940 : 478.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 207.0) no description available & (gnl|cdd|85496 : 118.0) no description available & (reliability: 880.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf02215_533394-537074' '(at3g50760 : 463.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 910.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf03653_214666-222016' '(at5g67230 : 507.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 14-LIKE (IRX14-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G36890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36689 : 239.0) no description available & (gnl|cdd|48336 : 221.0) no description available & (reliability: 932.0) & (original description: Putative IRX14H, Description = Probable beta-1,4-xylosyltransferase IRX14H, PFAM = PF03360)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf04339_12347-17122' '(at5g54690 : 769.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 182.0) no description available & (reliability: 1538.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf04557_455932-459638' '(at2g28110 : 556.0) Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings.; FRAGILE FIBER 8 (FRA8); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 227.0) no description available & (gnl|cdd|66673 : 201.0) no description available & (reliability: 1112.0) & (original description: Putative IRX7, Description = Probable glucuronoxylan glucuronosyltransferase IRX7, PFAM = PF03016)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf08580_62111-68104' '(at2g37090 : 377.0) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.; IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits to 584 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|48336 : 207.0) no description available & (gnl|cdd|36689 : 197.0) no description available & (reliability: 754.0) & (original description: Putative IRX9, Description = Probable beta-1,4-xylosyltransferase IRX9, PFAM = PF03360)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf09127_101260-105762' '(at1g54940 : 496.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 208.0) no description available & (gnl|cdd|85496 : 117.0) no description available & (reliability: 912.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf09791_50340-53377' '(at3g50760 : 464.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 870.0) & (original description: Putative PGSC0003DMG400010088, Description = Hexosyltransferase, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf13041_295779-303187' '(at4g33330 : 726.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 238.0) no description available & (gnl|cdd|85496 : 135.0) no description available & (reliability: 1452.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf13644_111584-116598' '(at5g54690 : 810.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 1620.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T
'10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf18061_95304-98395' '(at3g50760 : 471.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 922.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'10.3.3' 'cell wall.hemicellulose synthesis.arabinoxylan' '' ''
'10.3.4' 'cell wall.hemicellulose synthesis.glucomannan' '' ''
'10.3.5' 'cell wall.hemicellulose synthesis.galactomannan' '' ''
'10.4' 'cell wall.pectin synthesis' 'nbv0.5scaffold2392_117686-122409' '(at3g02350 : 803.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1450.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T
'10.4' 'cell wall.pectin synthesis' 'niben044scf00016850ctg021_3468-8229' '(at3g02350 : 802.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1450.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T
'10.4' 'cell wall.pectin synthesis' 'niben101scf07720_89215-94524' '(at3g25140 : 859.0) Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.; QUASIMODO 1 (QUA1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, pectin biosynthetic process, homogalacturonan biosynthetic process; LOCATED IN: mitochondrion, Golgi apparatus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 9 (TAIR:AT3G02350.1); Has 1333 Blast hits to 1331 proteins in 208 species: Archae - 0; Bacteria - 350; Metazoa - 145; Fungi - 2; Plants - 818; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|85496 : 190.0) no description available & (reliability: 1718.0) & (original description: Putative GAUT8, Description = Galacturonosyltransferase 8, PFAM = PF01501)' T
'10.4.1' 'cell wall.pectin synthesis.homogalacturonan' '' ''
'10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'nbv0.3scaffold70115_1321-7076' '(at3g61130 : 1010.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85496 : 188.0) no description available & (reliability: 2020.0) & (original description: Putative GAUT1, Description = Polygalacturonate 4-alpha-galacturonosyltransferase, PFAM = PF01501)' T
'10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'niben101scf04294_505845-512150' '(at4g38270 : 776.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 3 (GAUT3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1424.0) & (original description: Putative GAUT3, Description = Probable galacturonosyltransferase 3, PFAM = PF01501)' T
'10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'niben101scf05118_48289-59356' '(at3g61130 : 915.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85496 : 199.0) no description available & (reliability: 1830.0) & (original description: Putative GAUT1, Description = Polygalacturonate 4-alpha-galacturonosyltransferase, PFAM = PF01501)' T
'10.4.2' 'cell wall.pectin synthesis.rhamnogalacturonan I' '' ''
'10.4.3' 'cell wall.pectin synthesis.rhamnogalacturonan II' '' ''
'10.4.3.6' 'cell wall.pectin synthesis.rhamnogalacturonan II.Xylose Transferase with Fucose Acceptor' 'niben101scf01756_107844-114511' '(at4g01220 : 508.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: rhamnogalacturonan xylosyltransferase 2 (TAIR:AT4G01750.1); Has 275 Blast hits to 271 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 1016.0) & (original description: Putative MGP4, Description = UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4, PFAM = PF03407)' T
'10.4.4' 'cell wall.pectin synthesis.Xylogalacturonan' '' ''
'10.4.4.1' 'cell wall.pectin synthesis.Xylogalacturonan.Xylose Transferase' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 810.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T
'10.5' 'cell wall.cell wall proteins' 'nbv0.3scaffold18891_26701-33011' '(at3g48530 : 496.0) SNF1-related protein kinase regulatory subunit gamma 1 (KING1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G69800.1); Has 3278 Blast hits to 3263 proteins in 1076 species: Archae - 152; Bacteria - 2121; Metazoa - 342; Fungi - 134; Plants - 135; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36975 : 225.0) no description available & (gnl|cdd|73140 : 134.0) no description available & (reliability: 992.0) & (original description: Putative KING1, Description = SNF1-related protein kinase regulatory subunit gamma-1, PFAM = PF00571;PF00571;PF00571)' T
'10.5' 'cell wall.cell wall proteins' 'niben101scf04754_262538-265584' '(at3g58800 : 368.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative BnaC08g29550D, Description = BnaC08g29550D protein, PFAM = )' T
'10.5' 'cell wall.cell wall proteins' 'niben101scf07244_415501-418580' '(at3g58800 : 373.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative BnaC08g29550D, Description = BnaC08g29550D protein, PFAM = )' T
'10.5' 'cell wall.cell wall proteins' 'niben101scf09025_76950-83802' '(at3g48530 : 533.0) SNF1-related protein kinase regulatory subunit gamma 1 (KING1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G69800.1); Has 3278 Blast hits to 3263 proteins in 1076 species: Archae - 152; Bacteria - 2121; Metazoa - 342; Fungi - 134; Plants - 135; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36975 : 224.0) no description available & (gnl|cdd|73140 : 134.0) no description available & (reliability: 1066.0) & (original description: Putative KING1, Description = SNF1-related protein kinase regulatory subunit gamma-1, PFAM = PF00571;PF00571;PF00571)' T
'10.5.1' 'cell wall.cell wall proteins.AGPs' '' ''
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold5812_20151-22867' '(at5g60490 : 173.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative fla11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold6794_16477-19745' '(at3g46550 : 328.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold39249_7121-9945' '(at2g24450 : 130.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold41912_11810-16865' '(at5g06390 : 587.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 341.0) no description available & (reliability: 1174.0) & (original description: Putative FLA16, Description = Fasciclin-like arabinogalactan protein 16, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold67264_1-4121' '(at4g12730 : 336.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold96481_1159-4424' '(at4g12730 : 386.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold702_273408-278588' '(at5g06390 : 560.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 311.0) no description available & (reliability: 1120.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 16, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold2183_287413-290747' '(at4g12730 : 387.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold6802_64150-67035' '(at5g60490 : 178.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative FLA5, Description = Fasciclin-like arabinogalactan protein 5, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00027714ctg002_30078-33571' '(at3g46550 : 346.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00037788ctg003_21039-24179' '(at5g03170 : 174.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00058600ctg000_1-3349' '(at4g12730 : 384.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative FLA2, Description = Fasciclin-like arabinogalactan protein 2, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00061760ctg000_324-3592' '(at3g46550 : 332.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00468_100049-103317' '(at3g46550 : 335.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00509_87949-91039' '(at5g03170 : 184.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00550_46136-49401' '(at2g45470 : 382.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative FLA10, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00788_421623-424441' '(at2g24450 : 137.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00788_459812-462636' '(at2g24450 : 130.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BnaA09g41380D, Description = BnaA09g41380D protein, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00861_809290-816049' '(at5g06390 : 571.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 347.0) no description available & (reliability: 1142.0) & (original description: Putative FLA17, Description = Fasciclin-like arabinogalactan protein 17, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01037_931298-934098' '(at2g04780 : 212.0) fasciclin-like arabinogalactan-protein 7 (Fla7); FASCICLIN-like arabinoogalactan 7 (FLA7); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 6 (TAIR:AT2G20520.1); Has 713 Blast hits to 707 proteins in 79 species: Archae - 4; Bacteria - 65; Metazoa - 1; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative FLA7, Description = Fasciclin-like arabinogalactan protein 7, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01484_42413-47961' '(at5g06390 : 576.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 335.0) no description available & (reliability: 1152.0) & (original description: Putative FLA15, Description = Fasciclin-like arabinogalactan protein 15, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01535_172135-176164' '(at5g55730 : 185.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 370.0) & (original description: Putative FLA, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01911_35926-38669' '(at5g03170 : 192.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03271_310394-313203' '(at5g55730 : 185.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 370.0) & (original description: Putative FLA, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03563_163934-166734' '(at2g04780 : 209.0) fasciclin-like arabinogalactan-protein 7 (Fla7); FASCICLIN-like arabinoogalactan 7 (FLA7); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 6 (TAIR:AT2G20520.1); Has 713 Blast hits to 707 proteins in 79 species: Archae - 4; Bacteria - 65; Metazoa - 1; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative FLA7, Description = Fasciclin-like arabinogalactan protein 7, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03757_197274-202454' '(at5g06390 : 565.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 336.0) no description available & (reliability: 1130.0) & (original description: Putative FLA17, Description = Fasciclin-like arabinogalactan protein 17, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04650_710081-713301' '(at4g12730 : 389.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04792_333988-336740' '(at1g03870 : 174.0) fasciclin-like arabinogalactan-protein 9 (Fla9); FASCICLIN-like arabinoogalactan 9 (FLA9); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 13 precursor (TAIR:AT5G44130.1); Has 1005 Blast hits to 985 proteins in 182 species: Archae - 18; Bacteria - 304; Metazoa - 15; Fungi - 9; Plants - 624; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04813_66137-69402' '(at2g45470 : 381.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 762.0) & (original description: Putative FLA10, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04847_64964-68150' '(at5g55730 : 401.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 802.0) & (original description: Putative BnaA03g11240D, Description = BnaA03g11240D protein, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05372_250065-252814' '(at5g03170 : 185.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05486_167069-169842' '(at5g60490 : 163.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative fla11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05667_216682-219941' '(at3g46550 : 339.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06123_80857-105022' '(at5g60490 : 181.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative fla11, Description = Putative cell surface adhesion protein, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06123_91993-94763' '(at5g60490 : 167.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85998 : 80.4) no description available & (reliability: 334.0) & (original description: Putative FLA5, Description = Fasciclin-like arabinogalactan protein 5, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06156_454534-457433' '(at3g12660 : 115.0) fasciclin-like arabinogalactan-protein, family (FLA14); FASCICLIN-like arabinogalactan protein 14 precursor (FLA14); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 278 Blast hits to 274 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 267; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = )' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08199_251306-259678' '(at3g46550 : 333.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative FLA9, Description = Fasciclin-like arabinogalactan protein 9, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08300_59937-62689' '(at1g03870 : 179.0) fasciclin-like arabinogalactan-protein 9 (Fla9); FASCICLIN-like arabinoogalactan 9 (FLA9); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 13 precursor (TAIR:AT5G44130.1); Has 1005 Blast hits to 985 proteins in 182 species: Archae - 18; Bacteria - 304; Metazoa - 15; Fungi - 9; Plants - 624; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative FLA6, Description = Fasciclin-like arabinogalactan protein 6, PFAM = PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08370_127687-130931' '(at5g55730 : 400.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 800.0) & (original description: Putative FLA2, Description = Fasciclin-like arabinogalactan protein 2, PFAM = PF02469;PF02469)' T
'10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf32632_6874-11087' '(at4g12730 : 332.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative Sb02g019380, Description = Putative uncharacterized protein Sb02g019380, PFAM = PF02469;PF02469)' T
'10.5.1.2' 'cell wall.cell wall proteins.AGPs.AGP Fucosyltransferase' '' ''
'10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'nbv0.3scaffold96548_1-2096' '(at4g38770 : 92.4) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (gnl|cdd|70214 : 83.6) no description available & (reliability: 184.8) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T
'10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben044scf00002857ctg006_5462-9318' '(at4g38770 : 122.0) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (gnl|cdd|70214 : 83.2) no description available & (reliability: 244.0) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T
'10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben101scf01847_276900-280895' '(at4g38770 : 117.0) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PRP2, Description = Proline-rich protein 2, PFAM = PF01190)' T
'10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben101scf04327_200596-211464' '(gnl|cdd|70214 : 108.0) no description available & (at4g38770 : 96.7) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.3scaffold1438_54752-58893' '(at1g62440 : 454.0) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.; leucine-rich repeat/extensin 2 (LRX2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat/extensin 1 (TAIR:AT1G12040.1); Has 394418 Blast hits to 112735 proteins in 3055 species: Archae - 811; Bacteria - 65245; Metazoa - 131456; Fungi - 52175; Plants - 95400; Viruses - 7676; Other Eukaryotes - 41655 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 94.0) no description available & (reliability: 908.0) & (original description: Putative LRX6, Description = Leucine-rich repeat extensin-like protein 6, PFAM = PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.3scaffold53701_5498-10366' '(at3g24480 : 579.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 111.0) no description available & (gnl|cdd|75061 : 85.5) no description available & (reliability: 1158.0) & (original description: Putative LRX7, Description = Leucine-rich repeat extensin-like protein 7, PFAM = )' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold991_252105-256973' '(at3g24480 : 579.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 111.0) no description available & (gnl|cdd|75061 : 85.1) no description available & (reliability: 1158.0) & (original description: Putative BnaA03g38910D, Description = BnaA03g38910D protein, PFAM = )' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold2982_273357-276976' '(at2g15880 : 491.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 982.0) & (original description: Putative BnaCnng78240D, Description = BnaCnng78240D protein, PFAM = PF13855;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold3148_173735-177252' '(at4g13340 : 454.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.0) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855;PF08263;PF12799)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold9168_17608-21482' '(at3g19020 : 404.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 95.1) no description available & (gnl|cdd|75061 : 85.9) no description available & (reliability: 808.0) & (original description: Putative BnaA03g38910D, Description = BnaA03g38910D protein, PFAM = PF13855;PF08263)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00016274ctg010_21976-26104' '(at2g15880 : 388.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 112.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 99.3) no description available & (gnl|cdd|78817 : 92.1) no description available & (reliability: 776.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00019394ctg008_1-2725' '(at2g15880 : 484.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 84.3) no description available & (reliability: 968.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00024482ctg003_5884-9560' '(at3g24480 : 582.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35481 : 110.0) no description available & (gnl|cdd|75061 : 85.5) no description available & (reliability: 1164.0) & (original description: Putative LRX4, Description = Leucine-rich repeat extensin-like protein 4, PFAM = )' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00042991ctg007_9394-14247' '(at3g24480 : 581.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 109.0) no description available & (gnl|cdd|75061 : 89.0) no description available & (reliability: 1162.0) & (original description: Putative BnaC08g41590D, Description = BnaC08g41590D protein, PFAM = )' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00060166ctg000_1250-4032' '(at3g22800 : 408.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 229273 Blast hits to 72952 proteins in 2610 species: Archae - 422; Bacteria - 37303; Metazoa - 68145; Fungi - 17365; Plants - 71911; Viruses - 5341; Other Eukaryotes - 28786 (source: NCBI BLink). & (p93194|rpk1_iponi : 110.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 816.0) & (original description: Putative Sb02g004260, Description = Putative uncharacterized protein Sb02g004260, PFAM = PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf00643_138000-212260' '(at4g06744 : 374.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 109.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 748.0) & (original description: Putative LRX3, Description = Uncharacterized protein At4g06744 family, PFAM = PF00560)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf01586_225742-230507' '(at3g24480 : 580.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 84.3) no description available & (reliability: 1160.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf01750_735812-769662' '(at4g13340 : 454.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.8) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF12799;PF08263;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf02357_690386-693759' '(at2g42800 : 415.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 110.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 95.4) no description available & (reliability: 830.0) & (original description: Putative RLP29, Description = At2g42800, PFAM = PF13855;PF13855;PF00560)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf02390_207304-210701' '(at2g42800 : 409.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 118.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 87.8) no description available & (reliability: 818.0) & (original description: Putative NARK, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF13855;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf03080_481061-485142' '(at3g19020 : 404.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 101.0) no description available & (gnl|cdd|75061 : 91.7) no description available & (reliability: 808.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf03307_401255-404454' '(at4g29240 : 426.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G19780.1); Has 63461 Blast hits to 20951 proteins in 903 species: Archae - 14; Bacteria - 2781; Metazoa - 8815; Fungi - 480; Plants - 47912; Viruses - 34; Other Eukaryotes - 3425 (source: NCBI BLink). & (p93194|rpk1_iponi : 132.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 852.0) & (original description: Putative Os05g0188700, Description = Os05g0188700 protein, PFAM = PF08263;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf05467_11122-14492' '(at2g42800 : 426.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 109.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 101.0) no description available & (reliability: 852.0) & (original description: Putative RLP29, Description = At2g42800, PFAM = PF13855;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf07563_258217-261494' '(at4g06744 : 377.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 92.8) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 754.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = PF08263)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf10412_213058-216318' '(at2g15880 : 484.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.8) no description available & (reliability: 968.0) & (original description: Putative LRX4, Description = Leucine-rich repeat extensin-like protein 4, PFAM = PF13855;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf14274_135357-138435' '(at4g29240 : 430.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G19780.1); Has 63461 Blast hits to 20951 proteins in 903 species: Archae - 14; Bacteria - 2781; Metazoa - 8815; Fungi - 480; Plants - 47912; Viruses - 34; Other Eukaryotes - 3425 (source: NCBI BLink). & (p93194|rpk1_iponi : 132.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 860.0) & (original description: Putative BnaC09g10090D, Description = BnaC09g10090D protein, PFAM = PF13855;PF08263)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf16542_140690-145041' '(at1g62440 : 454.0) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.; leucine-rich repeat/extensin 2 (LRX2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat/extensin 1 (TAIR:AT1G12040.1); Has 394418 Blast hits to 112735 proteins in 3055 species: Archae - 811; Bacteria - 65245; Metazoa - 131456; Fungi - 52175; Plants - 95400; Viruses - 7676; Other Eukaryotes - 41655 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 92.8) no description available & (gnl|cdd|75061 : 84.3) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf18057_38150-41289' '(at4g28380 : 395.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19020.1); Has 56971 Blast hits to 17893 proteins in 671 species: Archae - 10; Bacteria - 1073; Metazoa - 6575; Fungi - 300; Plants - 46284; Viruses - 0; Other Eukaryotes - 2729 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative BnaCnng78240D, Description = BnaCnng78240D protein, PFAM = PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf20135_48025-52430' '(at3g19020 : 417.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 119.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 101.0) no description available & (gnl|cdd|75061 : 89.3) no description available & (reliability: 834.0) & (original description: Putative LRX2, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T
'10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf21895_91688-94924' '(at4g06744 : 379.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 86.3) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 758.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = )' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'nbv0.3scaffold15632_1-5358' '(at4g28300 : 253.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 84.9) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'nbv0.3scaffold48156_598-6507' '(at3g22440 : 582.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 321.0) no description available & (reliability: 1164.0) & (original description: Putative FRL4A, Description = FRIGIDA-like protein 4a, PFAM = PF07899)' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben044scf00036599ctg002_18415-26030' '(at4g28300 : 247.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 96.4) no description available & (reliability: 494.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf00058_756099-763595' '(at3g22440 : 564.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 321.0) no description available & (reliability: 1128.0) & (original description: Putative FRL4A, Description = FRIGIDA-like protein 4a, PFAM = PF07899)' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf03432_30007-38787' '(at3g22440 : 237.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 223.0) no description available & (reliability: 474.0) & (original description: Putative PGSC0003DMG400018590, Description = Os03g0794900 protein, PFAM = PF07899)' T
'10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf06208_1-5541' '(at4g28300 : 283.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 88.3) no description available & (reliability: 566.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'nbv0.3scaffold56729_3264-7458' '(q8ru27|uptg2_soltu : 685.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 672.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 570.0) no description available & (reliability: 1344.0) & (original description: Putative UPTG, Description = Alpha-1,4-glucan-protein synthase [UDP-forming], PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00020043ctg003_6074-9403' '(q9sc19|uptg1_soltu : 624.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 620.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 540.0) no description available & (reliability: 1240.0) & (original description: Putative RGP, Description = Reversibly glycosylated polypeptide family, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00033013ctg002_3027-7424' '(q8ru27|uptg2_soltu : 686.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 671.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 570.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00055939ctg003_3871-8615' '(gnl|cdd|72787 : 504.0) no description available & (at5g16510 : 489.0) Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell junction, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 238 Blast hits to 236 proteins in 43 species: Archae - 22; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o04300|uptg_pea : 365.0) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) - Pisum sativum (Garden pea) & (reliability: 978.0) & (original description: Putative RGP5, Description = Probable UDP-arabinopyranose mutase 5, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf00177_1188391-1195248' '(at5g16510 : 520.0) Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell junction, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 238 Blast hits to 236 proteins in 43 species: Archae - 22; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|72787 : 507.0) no description available & (o04300|uptg_pea : 375.0) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) - Pisum sativum (Garden pea) & (reliability: 1040.0) & (original description: Putative RGP5, Description = Probable UDP-arabinopyranose mutase 5, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf00821_1-4395' '(q8ru27|uptg2_soltu : 710.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 660.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 565.0) no description available & (reliability: 1320.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf01521_194016-198957' '(q8ru27|uptg2_soltu : 724.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 669.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 576.0) no description available & (reliability: 1338.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf03056_27368-32426' '(q8ru27|uptg2_soltu : 687.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 670.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 571.0) no description available & (reliability: 1340.0) & (original description: Putative UAM3, Description = UDP-arabinopyranose mutase 3, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05414_24592-29096' '(q9sc19|uptg1_soltu : 719.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g02230 : 671.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 575.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG1, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 1, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05618_417099-421327' '(q9sc19|uptg1_soltu : 670.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 657.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 564.0) no description available & (reliability: 1314.0) & (original description: Putative RGP4, Description = Probable UDP-arabinopyranose mutase 4, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05620_182219-186910' '(q8ru27|uptg2_soltu : 731.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 671.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 579.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05620_182234-186652' '(q8ru27|uptg2_soltu : 724.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 668.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 578.0) no description available & (reliability: 1336.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf06825_423139-426472' '(q9sc19|uptg1_soltu : 625.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 621.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 541.0) no description available & (reliability: 1242.0) & (original description: Putative UAM2, Description = Probable UDP-arabinopyranose mutase 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf14390_25941-31656' '(q8ru27|uptg2_soltu : 671.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 653.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 562.0) no description available & (reliability: 1306.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf17815_36368-40788' '(q8ru27|uptg2_soltu : 734.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 666.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 578.0) no description available & (reliability: 1332.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T
'10.6' 'cell wall.degradation' 'nbv0.3scaffold24408_12992-19421' '(at5g34940 : 671.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 380.0) no description available & (reliability: 1342.0) & (original description: Putative BnaC07g31120D, Description = BnaC07g31120D protein, PFAM = PF03662)' T
'10.6' 'cell wall.degradation' 'nbv0.5scaffold2575_173340-179563' '(at5g34940 : 558.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 381.0) no description available & (reliability: 1116.0) & (original description: Putative BnaA10g23380D, Description = BnaA10g23380D protein, PFAM = PF03662)' T
'10.6' 'cell wall.degradation' 'niben044scf00002908ctg002_4799-7104' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400014303, Description = Peptidoglycan-binding LysM domain protein, PFAM = PF01476)' T
'10.6' 'cell wall.degradation' 'niben044scf00026934ctg003_3702-9936' '(at5g34940 : 674.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 402.0) no description available & (reliability: 1348.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T
'10.6' 'cell wall.degradation' 'niben101scf00282_27988-30293' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400014303, Description = Peptidoglycan-binding LysM domain protein, PFAM = PF01476)' T
'10.6' 'cell wall.degradation' 'niben101scf00906_118543-120863' '(at3g52790 : 110.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392); BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative Ccrd_007644, Description = Peptidoglycan-binding lysin domain-containing protein, PFAM = PF01476)' T
'10.6' 'cell wall.degradation' 'niben101scf02085_1839774-1845997' '(at5g34940 : 579.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 378.0) no description available & (reliability: 1158.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T
'10.6' 'cell wall.degradation' 'niben101scf05552_1016299-1018661' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At4g25433, Description = At4g25433, PFAM = PF01476)' T
'10.6' 'cell wall.degradation' 'niben101scf16691_10553-19579' '(at5g34940 : 673.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 400.0) no description available & (reliability: 1346.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.3scaffold17380_16517-23126' '(at2g32990 : 665.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 615.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 551.0) no description available & (reliability: 1330.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.3scaffold52188_2552-10547' '(at5g20950 : 959.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1918.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold722_284789-291398' '(at2g32990 : 666.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 610.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 556.0) no description available & (reliability: 1332.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold3026_264519-270870' '(at5g04885 : 865.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1706.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF01915;PF00933)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold3532_186817-190661' '(at3g43860 : 543.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 501.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 378.0) no description available & (reliability: 1086.0) & (original description: Putative GH9B4, Description = Endo-1,4-beta-glucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00011140ctg006_11842-18139' '(at5g20950 : 958.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 263.0) no description available & (reliability: 1916.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00024745ctg007_8005-13474' '(at5g04885 : 860.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 251.0) no description available & (reliability: 1558.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00029313ctg001_1-7253' '(p22503|gun_phavu : 622.0) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase) (Abscission cellulase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g09740 : 600.0) glycosyl hydrolase 9B14 (GH9B14); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B15 (TAIR:AT4G23560.1); Has 1884 Blast hits to 1872 proteins in 267 species: Archae - 2; Bacteria - 724; Metazoa - 173; Fungi - 19; Plants - 922; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|85009 : 529.0) no description available & (reliability: 1200.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00048725ctg005_10902-13436' '(at3g47000 : 286.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|85764 : 151.0) no description available & (reliability: 572.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00023_489554-495401' '(at2g32990 : 666.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 605.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 548.0) no description available & (reliability: 1332.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00261_66767-70670' '(at3g43860 : 548.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 499.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 385.0) no description available & (reliability: 1096.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00286_568477-576548' '(at5g20950 : 621.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 160.0) no description available & (reliability: 1242.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00856_114462-128637' '(at5g04885 : 956.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 249.0) no description available & (reliability: 1740.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf01184_1647446-1652520' '(at1g71380 : 662.0) cellulase 3 (CEL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 5 (TAIR:AT1G22880.1); Has 1752 Blast hits to 1741 proteins in 250 species: Archae - 2; Bacteria - 607; Metazoa - 172; Fungi - 17; Plants - 917; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|85009 : 568.0) no description available & (q7xth4|gun11_orysa : 559.0) Endoglucanase 11 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 11) (OsGLU4) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf01418_216370-220380' '(at3g43860 : 664.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 613.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 485.0) no description available & (reliability: 1328.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf02250_26307-33032' '(at3g47000 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 268.0) no description available & (reliability: 1804.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf05588_640668-647428' '(at5g20950 : 989.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1978.0) & (original description: Putative BGL, Description = Beta-glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf05588_826642-833218' '(at5g20950 : 951.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 246.0) no description available & (reliability: 1902.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06189_254527-261986' '(at3g47000 : 905.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 267.0) no description available & (reliability: 1810.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06267_302543-307717' '(q69sg5|gun24_orysa : 627.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (at1g19940 : 606.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 466.0) no description available & (reliability: 1212.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06775_69948-79469' '(at5g20950 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1804.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf07470_49965-58962' '(at3g47000 : 903.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 275.0) no description available & (reliability: 1806.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf08133_2624-9724' '(at2g32990 : 775.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 691.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 562.0) no description available & (reliability: 1550.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf08411_142941-152015' '(p22503|gun_phavu : 635.0) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase) (Abscission cellulase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g09740 : 611.0) glycosyl hydrolase 9B14 (GH9B14); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B15 (TAIR:AT4G23560.1); Has 1884 Blast hits to 1872 proteins in 267 species: Archae - 2; Bacteria - 724; Metazoa - 173; Fungi - 19; Plants - 922; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|85009 : 543.0) no description available & (reliability: 1222.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf09698_79828-91472' '(at5g20950 : 887.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1774.0) & (original description: Putative BG, Description = Endo-alpha-1,4-glucanase, PFAM = PF01915;PF00933)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf11743_67294-74707' '(at1g19940 : 678.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (q69sg5|gun24_orysa : 670.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (gnl|cdd|85009 : 464.0) no description available & (reliability: 1356.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf13289_312750-319422' '(at5g20950 : 961.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 261.0) no description available & (reliability: 1922.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold26285_431-4435' '(at5g57550 : 373.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 356.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 724.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold31079_3060-11616' '(p48981|bgal_maldo : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1076.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2110.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold42617_5200-9426' '(at5g57550 : 391.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 369.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 734.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold46605_9016-14661' '(at4g33840 : 537.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1074.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold96773_1-4449' '(at5g66460 : 361.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 100.0) no description available & (reliability: 722.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold102365_218-3490' '(at4g25810 : 395.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 389.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 335.0) no description available & (reliability: 770.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold468_503812-511381' '(at5g10560 : 965.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 358.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 184.0) no description available & (reliability: 1930.0) & (original description: Putative BXL6, Description = Probable beta-D-xylosidase 6, PFAM = PF00933;PF14310;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1091_98688-103898' '(at5g66460 : 436.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 102.0) no description available & (reliability: 872.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1463_152915-448225' '(q7y1x1|est_hevbr : 88.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (at5g14450 : 87.8) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative At3g27950, Description = GDSL esterase/lipase, PFAM = )' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1795_62321-65641' '(at5g49360 : 189.0) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 1 (BXL1); FUNCTIONS IN: alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: seed coat development; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 2 (TAIR:AT1G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ARF, Description = Putative beta-D-xylosidase 2, PFAM = )' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold2376_1-4602' '(at5g66460 : 280.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative manA, Description = Mannan endo-1,4-beta-mannosidase-like protein, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold2445_202268-213261' '(at4g33840 : 502.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1004.0) & (original description: Putative PGSC0003DMG400014606, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold3592_1250-4896' '(p35694|bru1_soybn : 396.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|29536 : 339.0) no description available & (reliability: 776.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold5939_97662-107006' '(at4g33840 : 559.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1118.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00000286ctg009_1391-8886' '(at4g33840 : 497.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 994.0) & (original description: Putative BnaA03g50660D, Description = BnaA03g50660D protein, PFAM = PF00331;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00001387ctg010_1-1830' '(at1g02640 : 276.0) encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 2 (BXL2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 1 (TAIR:AT5G49360.1); Has 9578 Blast hits to 8300 proteins in 1224 species: Archae - 65; Bacteria - 5802; Metazoa - 17; Fungi - 1614; Plants - 527; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (p83344|xynb_prupe : 237.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 552.0) & (original description: Putative ARF, Description = Putative beta-D-xylosidase 2, PFAM = PF14310)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00001654ctg000_11897-16773' '(at5g66460 : 249.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 84.3) no description available & (reliability: 498.0) & (original description: Putative MAN6, Description = Endo-beta-1,4-mannanase, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00005165ctg006_1-9379' '(at1g58370 : 1243.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 234.0) no description available & (reliability: 2486.0) & (original description: Putative xynZ, Description = Beta-xylanase, PFAM = PF02018;PF02018;PF02018;PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00008871ctg006_1-2003' '(at4g25810 : 396.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 395.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 339.0) no description available & (reliability: 778.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00015861ctg003_14985-21545' '(at5g66460 : 417.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 108.0) no description available & (reliability: 834.0) & (original description: Putative manA, Description = Mannan endo-1,4-beta-mannosidase-like protein, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00025658ctg006_2473-6421' '(at5g01930 : 646.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 115.0) no description available & (reliability: 1292.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00033056ctg000_1-4190' '(at5g66460 : 437.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 106.0) no description available & (reliability: 874.0) & (original description: Putative manA, Description = (1-4)-beta-mannan endohydrolase, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00035404ctg000_2978-7946' '(at4g33840 : 575.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1150.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00039533ctg003_10307-20286' '(at1g78060 : 1027.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 365.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85764 : 203.0) no description available & (reliability: 2054.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF14310;PF01915;PF00933)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00044931ctg006_1-2653' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (p35694|bru1_soybn : 321.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 634.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00048158ctg007_1-3311' '(at5g57550 : 351.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 330.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 652.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00057082ctg004_2992-8490' '(at3g10740 : 488.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification.; alpha-L-arabinofuranosidase 1 (ASD1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal (InterPro:IPR010720), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 2 (TAIR:AT5G26120.1); Has 1627 Blast hits to 1611 proteins in 407 species: Archae - 8; Bacteria - 1238; Metazoa - 0; Fungi - 173; Plants - 169; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|87190 : 106.0) no description available & (reliability: 976.0) & (original description: Putative Sb01g036960, Description = Putative uncharacterized protein Sb01g036960, PFAM = PF06964)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101ctg13782_1-2126' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 388.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 333.0) no description available & (reliability: 768.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00069_925002-984804' '(at5g10560 : 953.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 351.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 188.0) no description available & (reliability: 1906.0) & (original description: Putative Sb06g023450, Description = Putative uncharacterized protein Sb06g023450, PFAM = PF00933;PF01915;PF14310)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00113_408874-419694' '(at4g33830 : 454.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47910 : 178.0) no description available & (reliability: 908.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00279_109349-116989' '(at5g64570 : 1155.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 471.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 200.0) no description available & (reliability: 2310.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF00933;PF14310;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00422_194493-206257' '(p48981|bgal_maldo : 1095.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1065.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2094.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00630_386264-397902' '(at1g78060 : 941.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 331.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 191.0) no description available & (reliability: 1882.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF00933;PF14310;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00663_459059-470164' '(at4g25810 : 367.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 361.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 706.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00761_393316-397223' '(at5g66460 : 428.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 109.0) no description available & (reliability: 856.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00766_133534-149440' '(at3g26430 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 430.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 317.0) no description available & (reliability: 920.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00996_274304-277803' '(at4g14130 : 356.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 353.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 332.0) no description available & (reliability: 684.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01184_1493012-1497203' '(at5g66460 : 439.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 96.6) no description available & (reliability: 878.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01209_484105-490843' '(at3g19620 : 771.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-D-xylosidase 4 (TAIR:AT5G64570.1); Has 9087 Blast hits to 7801 proteins in 1160 species: Archae - 63; Bacteria - 5399; Metazoa - 17; Fungi - 1628; Plants - 528; Viruses - 0; Other Eukaryotes - 1452 (source: NCBI BLink). & (p83344|xynb_prupe : 378.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 196.0) no description available & (reliability: 1542.0) & (original description: Putative Sb03g012290, Description = Putative uncharacterized protein Sb03g012290, PFAM = PF14310;PF01915;PF00933)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01591_28500-35914' '(at5g57550 : 340.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 317.0) no description available & (p35694|bru1_soybn : 316.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 644.0) & (original description: Putative xet1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01894_194314-200825' '(at5g64570 : 1042.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 427.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 193.0) no description available & (reliability: 2084.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF00933;PF01915;PF14310)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02348_591555-601006' '(at1g58370 : 1252.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 233.0) no description available & (reliability: 2504.0) & (original description: Putative xynZ, Description = Beta-xylanase, PFAM = PF00331;PF02018;PF02018;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02375_376815-383552' '(at1g58370 : 1282.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 244.0) no description available & (reliability: 2564.0) & (original description: Putative Xyn1, Description = Endo-1,4-beta-xylanase, PFAM = PF00331;PF02018;PF02018;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02413_186870-192308' '(at5g57550 : 379.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 364.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 724.0) & (original description: Putative XTH25, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 25, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02413_227990-234096' '(at5g57550 : 358.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 331.0) no description available & (p35694|bru1_soybn : 329.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 672.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02459_445735-449746' '(at5g66460 : 440.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 102.0) no description available & (reliability: 880.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf03143_1147990-1154143' '(at3g26430 : 507.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 432.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 319.0) no description available & (reliability: 930.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf03881_28534-35196' '(at5g64570 : 1040.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 426.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 195.0) no description available & (reliability: 2080.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF14310;PF00933;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf04392_426191-431777' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 371.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 336.0) no description available & (reliability: 728.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05304_1156824-1160866' '(at3g10890 : 433.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, petal, embryo, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10900.1); Has 765 Blast hits to 758 proteins in 196 species: Archae - 23; Bacteria - 223; Metazoa - 0; Fungi - 184; Plants - 307; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|33716 : 112.0) no description available & (reliability: 866.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05702_309186-312242' '(at3g23730 : 380.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p35694|bru1_soybn : 358.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 684.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05890_276567-282872' '(at2g28100 : 672.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 612.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (gnl|cdd|33467 : 219.0) no description available & (gnl|cdd|38550 : 162.0) no description available & (reliability: 1344.0) & (original description: Putative FUC1, Description = Alpha-L-fucosidase 1, PFAM = PF01120)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06171_76977-82230' '(at5g66460 : 543.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 108.0) no description available & (reliability: 1086.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase 7, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06375_56962-63534' '(at1g78060 : 986.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 340.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 204.0) no description available & (reliability: 1972.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF01915;PF00933;PF14310)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06535_261619-274255' '(at5g49360 : 1085.0) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 1 (BXL1); FUNCTIONS IN: alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: seed coat development; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 2 (TAIR:AT1G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 630.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85764 : 196.0) no description available & (reliability: 2170.0) & (original description: Putative BXL1, Description = Beta-D-xylosidase 1, PFAM = PF14310;PF00933;PF01915)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06716_91794-103918' '(at3g10740 : 926.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification.; alpha-L-arabinofuranosidase 1 (ASD1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal (InterPro:IPR010720), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 2 (TAIR:AT5G26120.1); Has 1627 Blast hits to 1611 proteins in 407 species: Archae - 8; Bacteria - 1238; Metazoa - 0; Fungi - 173; Plants - 169; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|33336 : 140.0) no description available & (reliability: 1852.0) & (original description: Putative ASD1, Description = Alpha-L-arabinofuranosidase 1, PFAM = PF06964)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06884_124192-128499' '(at2g28100 : 477.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 451.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (gnl|cdd|33467 : 207.0) no description available & (gnl|cdd|38550 : 132.0) no description available & (reliability: 954.0) & (original description: Putative FUC1, Description = Alpha-L-fucosidase 1, PFAM = PF01120)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07027_397990-400622' '(p45582|bgal_aspof : 100.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at1g45130 : 99.4) beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|35717 : 93.8) no description available & (gnl|cdd|85374 : 81.0) no description available & (reliability: 186.4) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07244_60647-63772' '(at4g14130 : 362.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 357.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 680.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07608_235805-241969' '(at4g33840 : 529.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 185.0) no description available & (reliability: 1058.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07882_2448-6341' '(at3g10890 : 435.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, petal, embryo, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10900.1); Has 765 Blast hits to 758 proteins in 196 species: Archae - 23; Bacteria - 223; Metazoa - 0; Fungi - 184; Plants - 307; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|33716 : 107.0) no description available & (reliability: 870.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09505_171063-176787' '(at4g33840 : 547.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1094.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09505_171279-174402' '(at4g33840 : 229.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 147.0) no description available & (reliability: 458.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09654_141856-146995' '(at4g33840 : 518.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 191.0) no description available & (reliability: 1036.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331;PF02018)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09906_175625-180939' '(at5g01930 : 654.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 116.0) no description available & (reliability: 1308.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf10835_1799-6777' '(at5g66460 : 586.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 112.0) no description available & (reliability: 1172.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase 7, PFAM = PF00150)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf14470_7844-10954' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p35694|bru1_soybn : 319.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 634.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf16089_26458-33301' '(at5g01930 : 648.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 114.0) no description available & (reliability: 1296.0) & (original description: Putative MAN4, Description = Mannan endo-1,4-beta-mannosidase 4, PFAM = PF00150)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold2493_59210-69639' '(at5g04310 : 581.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 411.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 1162.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold5135_53299-59127' '(at1g14420 : 449.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 394.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 233.0) no description available & (reliability: 898.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold5537_39149-42830' '(at1g11920 : 504.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 14 (TAIR:AT4G22080.1); Has 1675 Blast hits to 1668 proteins in 273 species: Archae - 0; Bacteria - 759; Metazoa - 0; Fungi - 209; Plants - 697; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p40973|pel_lillo : 332.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 220.0) no description available & (reliability: 1008.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold9388_12610-17249' '(at1g78400 : 280.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR:AT2G33160.1); Has 3713 Blast hits to 3693 proteins in 464 species: Archae - 4; Bacteria - 847; Metazoa - 14; Fungi - 1259; Plants - 1481; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 249.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 225.0) no description available & (reliability: 560.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold13479_25042-32414' '(at3g16850 : 510.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 172.0) no description available & (p35338|pglr2_maize : 91.3) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1020.0) & (original description: Putative At5g49215, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold16322_19833-34407' '(at2g22620 : 604.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 234.0) no description available & (reliability: 1208.0) & (original description: Putative PGSC0003DMG400015675, Description = Rhamnogalacturonate lyase, PFAM = PF14686;PF14683;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold27951_246-17000' '(at1g09910 : 709.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 249.0) no description available & (reliability: 1418.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold34762_1555-5393' '(at3g61490 : 716.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 195.0) no description available & (p26216|pglr1_maize : 97.8) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1432.0) & (original description: Putative BnaA03g52530D, Description = BnaA03g52530D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold38518_2981-12712' '(at4g33440 : 605.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G62110.1); Has 4317 Blast hits to 4300 proteins in 507 species: Archae - 6; Bacteria - 1547; Metazoa - 14; Fungi - 1180; Plants - 1416; Viruses - 2; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|34993 : 205.0) no description available & (p35336|pglr_actch : 87.8) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1210.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold40652_332-5144' '(at1g09910 : 263.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold46649_3057-7880' '(p35336|pglr_actch : 423.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 397.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 305.0) no description available & (reliability: 794.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold57477_435-5369' '(at1g17150 : 315.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 302.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 280.0) no description available & (reliability: 630.0) & (original description: Putative PG2C, Description = Exopolygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold66860_2055-10071' '(at3g42950 : 724.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 225.0) no description available & (q39786|pglr_goshi : 101.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1448.0) & (original description: Putative BnaA08g22190D, Description = BnaA08g22190D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold80624_1625-5691' '(at1g70370 : 669.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 262.0) no description available & (reliability: 1338.0) & (original description: Putative PGL3, Description = Polygalacturonase 1 beta-like protein 3, PFAM = PF03181)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold587_331117-338553' '(at4g23500 : 680.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G61490.3); Has 4172 Blast hits to 4159 proteins in 509 species: Archae - 6; Bacteria - 1479; Metazoa - 14; Fungi - 1128; Plants - 1399; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|34993 : 199.0) no description available & (p26216|pglr1_maize : 91.3) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1360.0) & (original description: Putative PG2, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold820_388612-404094' '(at2g22620 : 764.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 246.0) no description available & (reliability: 1528.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF14686;PF06045;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1195_72962-82093' '(at3g61490 : 716.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 194.0) no description available & (p35338|pglr2_maize : 107.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1432.0) & (original description: Putative pco064986a, Description = Putative polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1308_24756-208353' '(at1g09890 : 750.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 177.0) no description available & (reliability: 1500.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14683;PF14686;PF06045;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1308_98864-132378' '(at1g09890 : 501.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 261.0) no description available & (reliability: 1002.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2067_259614-271663' '(at1g80170 : 166.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 115.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 332.0) & (original description: Putative PG, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2085_278655-283839' '(at1g67750 : 634.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 229.0) no description available & (reliability: 1268.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2430_85418-221399' '(at1g78400 : 129.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR:AT2G33160.1); Has 3713 Blast hits to 3693 proteins in 464 species: Archae - 4; Bacteria - 847; Metazoa - 14; Fungi - 1259; Plants - 1481; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 100.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400017348, Description = Polygalacturonase/glycoside hydrolase family protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2897_217729-224014' '(at5g04310 : 582.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 399.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 231.0) no description available & (reliability: 1164.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold3054_269393-280395' '(at5g04310 : 579.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 390.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1158.0) & (original description: Putative PMR6, Description = Probable pectate lyase 13, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold4735_76455-80875' '(p48979|pglr_prupe : 223.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 187.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 124.0) no description available & (reliability: 374.0) & (original description: Putative PGC, Description = Polygalacturonase C, PFAM = PF00295;PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold5393_57916-63635' '(at4g23500 : 653.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G61490.3); Has 4172 Blast hits to 4159 proteins in 509 species: Archae - 6; Bacteria - 1479; Metazoa - 14; Fungi - 1128; Plants - 1399; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|34993 : 188.0) no description available & (p35336|pglr_actch : 83.6) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1306.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold5871_90221-95536' '(at3g15720 : 290.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 263.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 247.0) no description available & (reliability: 580.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold7566_31020-40485' '(at1g48100 : 656.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4526 Blast hits to 4502 proteins in 576 species: Archae - 8; Bacteria - 1381; Metazoa - 30; Fungi - 1439; Plants - 1518; Viruses - 5; Other Eukaryotes - 145 (source: NCBI BLink). & (p35336|pglr_actch : 289.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 257.0) no description available & (reliability: 1312.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00000648ctg004_4110-10824' '(at2g22620 : 575.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 1150.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00001161ctg003_14829-20167' '(at1g67750 : 636.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 230.0) no description available & (reliability: 1272.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00003054ctg007_8526-12992' '(at5g17200 : 286.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G15720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48978|pglr_maldo : 241.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 236.0) no description available & (reliability: 572.0) & (original description: Putative BnaC09g40790D, Description = BnaC09g40790D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00005744ctg031_17993-22791' '(at2g43870 : 471.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (p48979|pglr_prupe : 460.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 260.0) no description available & (reliability: 942.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00005902ctg007_5528-12073' '(at3g15720 : 320.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 273.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 265.0) no description available & (reliability: 640.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00006041ctg006_2239-9888' '(at4g13710 : 674.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 419.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1348.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00006698ctg006_8617-13037' '(p48979|pglr_prupe : 521.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 479.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 255.0) no description available & (reliability: 958.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00008717ctg008_1428-3622' '(p40973|pel_lillo : 301.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at5g15110 : 300.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G01270.1); Has 1602 Blast hits to 1594 proteins in 273 species: Archae - 0; Bacteria - 694; Metazoa - 0; Fungi - 171; Plants - 721; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|47932 : 178.0) no description available & (reliability: 600.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00008717ctg011_1-1213' '(at1g14420 : 165.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40972|pel_tobac : 149.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 330.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = )' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00010452ctg024_1037-4198' '(q05967|pglr_tobac : 431.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 293.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 288.0) no description available & (reliability: 586.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00011461ctg017_9779-13260' '(p40972|pel_tobac : 555.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at3g01270 : 431.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 213.0) no description available & (reliability: 862.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013050ctg003_1-4976' '(at3g61490 : 714.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 190.0) no description available & (p35338|pglr2_maize : 107.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1428.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013375ctg004_7782-12682' '(at2g33160 : 404.0) glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; FUNCTIONS IN: polygalacturonase activity, nucleic acid binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 4055 Blast hits to 4034 proteins in 453 species: Archae - 8; Bacteria - 853; Metazoa - 14; Fungi - 1250; Plants - 1822; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 337.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 276.0) no description available & (reliability: 808.0) & (original description: Putative plaa2, Description = Exopolygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013839ctg010_1-3799' '(at3g42950 : 625.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 162.0) no description available & (q39786|pglr_goshi : 85.9) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1250.0) & (original description: Putative PG5, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00016770ctg003_39615-44530' '(at1g02460 : 579.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 298.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 276.0) no description available & (reliability: 1158.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00018164ctg031_14-6500' '(at3g07970 : 309.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 288.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 256.0) no description available & (reliability: 618.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00024093ctg008_1-7301' '(q05967|pglr_tobac : 297.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at1g02790 : 284.0) encodes a exopolygalacturonase.; polygalacturonase 4 (PGA4); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 4155 Blast hits to 4140 proteins in 501 species: Archae - 6; Bacteria - 1251; Metazoa - 14; Fungi - 1275; Plants - 1482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|84675 : 276.0) no description available & (reliability: 568.0) & (original description: Putative PGA3, Description = Exopolygalacturonase clone GBGE184, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00028897ctg010_9361-19157' '(gnl|cdd|69561 : 229.0) no description available & (at1g09910 : 194.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00029149ctg012_1-11589' '(gnl|cdd|69561 : 230.0) no description available & (at1g09910 : 195.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00029940ctg003_51935-62762' '(at3g54920 : 580.0) Powdery mildew resistant mutant encodes a pectate lyase-like protein; powdery mildew resistant 6 (PMR6); CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 2753 Blast hits to 2553 proteins in 415 species: Archae - 3; Bacteria - 1039; Metazoa - 313; Fungi - 409; Plants - 814; Viruses - 7; Other Eukaryotes - 168 (source: NCBI BLink). & (p40973|pel_lillo : 412.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 223.0) no description available & (reliability: 1160.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00032402ctg010_3839-5644' '(at4g32375 : 91.7) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G32380.1); Has 34506 Blast hits to 17777 proteins in 1595 species: Archae - 136; Bacteria - 7511; Metazoa - 8673; Fungi - 3661; Plants - 8148; Viruses - 1351; Other Eukaryotes - 5026 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative At4g32370, Description = BnaC01g06140D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00033720ctg005_1-1568' '(at5g06860 : 114.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p35334|pgip1_phavu : 97.1) Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (PGIP-1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 228.0) & (original description: Putative pgip, Description = Polygalacturonase inhibiting protein, PFAM = )' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00034230ctg005_9661-15842' '(at4g23820 : 637.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1); Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6; Bacteria - 1472; Metazoa - 14; Fungi - 1146; Plants - 1414; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|34993 : 197.0) no description available & (p35338|pglr2_maize : 89.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1274.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00052142ctg001_2761-9437' '(at3g26610 : 551.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4342 Blast hits to 4315 proteins in 504 species: Archae - 6; Bacteria - 1404; Metazoa - 14; Fungi - 1284; Plants - 1492; Viruses - 2; Other Eukaryotes - 140 (source: NCBI BLink). & (p35336|pglr_actch : 247.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 247.0) no description available & (reliability: 1102.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00053024ctg000_1428-4787' '(at5g04310 : 489.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 341.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 978.0) & (original description: Putative PL2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00061465ctg000_1-6802' '(at2g22620 : 625.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 1250.0) & (original description: Putative At2g22620, Description = Rhamnogalacturonate lyase-like protein, PFAM = PF14686;PF06045;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00046_558011-562699' '(at5g63180 : 614.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 399.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 232.0) no description available & (reliability: 1228.0) & (original description: Putative 9612, Description = Probable pectate lyase P18, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00168_773547-778517' '(at2g43890 : 514.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G05650.1); Has 3985 Blast hits to 3965 proteins in 478 species: Archae - 4; Bacteria - 1086; Metazoa - 14; Fungi - 1267; Plants - 1489; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (p48979|pglr_prupe : 424.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 269.0) no description available & (reliability: 1028.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00168_896518-900867' '(at2g43880 : 457.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 384.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 259.0) no description available & (reliability: 914.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00171_17471-23607' '(at4g13710 : 682.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 404.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 233.0) no description available & (reliability: 1364.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00231_736249-742305' '(at1g23460 : 585.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 352.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 296.0) no description available & (reliability: 1170.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00265_244027-251739' '(q05967|pglr_tobac : 305.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at1g02790 : 303.0) encodes a exopolygalacturonase.; polygalacturonase 4 (PGA4); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 4155 Blast hits to 4140 proteins in 501 species: Archae - 6; Bacteria - 1251; Metazoa - 14; Fungi - 1275; Plants - 1482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|84675 : 275.0) no description available & (reliability: 606.0) & (original description: Putative PGA3, Description = Exopolygalacturonase clone GBGE184, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00339_631192-637864' '(at1g14420 : 515.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 478.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 1030.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00457_893433-903908' '(at3g53190 : 617.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 384.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 224.0) no description available & (reliability: 1234.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00561_1-8153' '(at1g09910 : 712.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 220.0) no description available & (reliability: 1424.0) & (original description: Putative BnaC05g07390D, Description = BnaC05g07390D protein, PFAM = PF14686;PF14683;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00593_437708-441626' '(p40973|pel_lillo : 529.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at3g01270 : 518.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 222.0) no description available & (reliability: 1036.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00637_451089-454081' '(at5g06860 : 405.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p58822|pgip2_phavu : 298.0) Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 810.0) & (original description: Putative pgip, Description = Polygalacturonase inhibitor, PFAM = PF00560;PF13855;PF08263)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00751_640174-644805' '(p48979|pglr_prupe : 444.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 439.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 274.0) no description available & (reliability: 878.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01155_421532-426647' '(at1g70370 : 719.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 281.0) no description available & (reliability: 1438.0) & (original description: Putative GP1, Description = Polygalacturonase-1 non-catalytic subunit beta, PFAM = PF03181)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01209_537783-548929' '(p35336|pglr_actch : 527.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g57510 : 421.0) Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.; ADPG1; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: polygalacturonase abscission zone A. thaliana (TAIR:AT2G41850.1); Has 4405 Blast hits to 4383 proteins in 555 species: Archae - 8; Bacteria - 1458; Metazoa - 14; Fungi - 1288; Plants - 1499; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|84675 : 343.0) no description available & (reliability: 842.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01220_213489-221352' '(at3g07010 : 660.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G48900.1); Has 1586 Blast hits to 1578 proteins in 262 species: Archae - 0; Bacteria - 663; Metazoa - 0; Fungi - 221; Plants - 695; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (p40973|pel_lillo : 404.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1320.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01314_55333-66458' '(at3g07970 : 313.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 290.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 262.0) no description available & (reliability: 626.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01362_499768-505596' '(at1g14420 : 491.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 430.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 232.0) no description available & (reliability: 982.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01430_495979-501595' '(at3g16850 : 503.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 171.0) no description available & (p35338|pglr2_maize : 91.7) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1006.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01655_90318-95216' '(at3g61490 : 732.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 189.0) no description available & (p35338|pglr2_maize : 108.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1464.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01721_84517-92217' '(p48979|pglr_prupe : 489.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 456.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 262.0) no description available & (reliability: 912.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01742_140319-143440' '(at1g60590 : 244.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1); Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6; Bacteria - 1298; Metazoa - 151; Fungi - 1295; Plants - 1596; Viruses - 3; Other Eukaryotes - 176 (source: NCBI BLink). & (p35336|pglr_actch : 139.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 133.0) no description available & (reliability: 488.0) & (original description: Putative PG, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01773_180313-186376' '(at1g02460 : 615.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 295.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 255.0) no description available & (reliability: 1230.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01917_1294568-1302458' '(at1g09910 : 942.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 293.0) no description available & (reliability: 1884.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF06045;PF14686;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01964_160646-165480' '(at1g02460 : 556.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 291.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 277.0) no description available & (reliability: 1112.0) & (original description: Putative ZePG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02132_182326-186438' '(p40973|pel_lillo : 492.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at1g14420 : 484.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 222.0) no description available & (reliability: 968.0) & (original description: Putative PGSC0003DMG400018142, Description = Pectate lyase, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02145_822168-826007' '(at4g22080 : 561.0) root hair specific 14 (RHS14); FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G22090.1); Has 1685 Blast hits to 1680 proteins in 281 species: Archae - 2; Bacteria - 749; Metazoa - 0; Fungi - 223; Plants - 700; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40973|pel_lillo : 379.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 227.0) no description available & (reliability: 1122.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02170_329751-369463' '(at1g11920 : 368.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 14 (TAIR:AT4G22080.1); Has 1675 Blast hits to 1668 proteins in 273 species: Archae - 0; Bacteria - 759; Metazoa - 0; Fungi - 209; Plants - 697; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p40973|pel_lillo : 263.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 171.0) no description available & (reliability: 736.0) & (original description: Putative B12, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_1288-9045' '(p48979|pglr_prupe : 451.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 446.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 278.0) no description available & (reliability: 892.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_69906-74770' '(at2g43880 : 472.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 393.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 264.0) no description available & (reliability: 944.0) & (original description: Putative G9, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_168330-171803' '(at2g43880 : 469.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 387.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 270.0) no description available & (reliability: 938.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02253_570400-573783' '(p40972|pel_tobac : 778.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at1g14420 : 432.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 217.0) no description available & (reliability: 864.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02615_173549-181372' '(at1g09890 : 884.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 295.0) no description available & (reliability: 1768.0) & (original description: Putative BnaA06g05810D, Description = BnaA06g05810D protein, PFAM = PF14686;PF14683;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02646_432297-436840' '(p48979|pglr_prupe : 521.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 483.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 257.0) no description available & (reliability: 966.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02724_67181-77315' '(at4g33440 : 624.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G62110.1); Has 4317 Blast hits to 4300 proteins in 507 species: Archae - 6; Bacteria - 1547; Metazoa - 14; Fungi - 1180; Plants - 1416; Viruses - 2; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|34993 : 208.0) no description available & (p35336|pglr_actch : 99.8) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1248.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02774_392549-405495' '(at2g22620 : 696.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 161.0) no description available & (reliability: 1392.0) & (original description: Putative At2g22620, Description = Rhamnogalacturonate lyase-like protein, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02819_578490-583129' '(at1g17150 : 286.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 251.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 233.0) no description available & (reliability: 572.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02949_269456-274640' '(at1g67750 : 667.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 421.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 230.0) no description available & (reliability: 1334.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03045_567925-572517' '(at1g23460 : 595.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 350.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 292.0) no description available & (reliability: 1190.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03264_561697-566636' '(p35336|pglr_actch : 420.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 392.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 300.0) no description available & (reliability: 784.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03284_832626-841909' '(at1g60590 : 535.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1); Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6; Bacteria - 1298; Metazoa - 151; Fungi - 1295; Plants - 1596; Viruses - 3; Other Eukaryotes - 176 (source: NCBI BLink). & (p35336|pglr_actch : 292.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 256.0) no description available & (reliability: 1070.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03362_596455-602905' '(at3g26610 : 538.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4342 Blast hits to 4315 proteins in 504 species: Archae - 6; Bacteria - 1404; Metazoa - 14; Fungi - 1284; Plants - 1492; Viruses - 2; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|84675 : 249.0) no description available & (p35336|pglr_actch : 247.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1076.0) & (original description: Putative At3g26610, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03437_324783-333718' '(at1g19170 : 686.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 4384 Blast hits to 4371 proteins in 509 species: Archae - 6; Bacteria - 1552; Metazoa - 14; Fungi - 1224; Plants - 1428; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34993 : 225.0) no description available & (q39786|pglr_goshi : 100.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1372.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03444_146712-150822' '(at5g63180 : 622.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 401.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 1244.0) & (original description: Putative 9612, Description = Probable pectate lyase P18, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03624_799262-807847' '(at1g09890 : 822.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 250.0) no description available & (reliability: 1644.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14686;PF14683;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03624_799310-806511' '(at1g09890 : 823.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 245.0) no description available & (reliability: 1646.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14683;PF06045;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03706_268302-273149' '(at3g16850 : 536.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 182.0) no description available & (p48979|pglr_prupe : 85.9) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (reliability: 1072.0) & (original description: Putative At3g16850, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03930_266615-271503' '(at5g17200 : 290.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G15720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48978|pglr_maldo : 248.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 243.0) no description available & (reliability: 580.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03930_377328-383197' '(at1g80170 : 510.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 366.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 298.0) no description available & (reliability: 1020.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03985_559803-566173' '(at4g23820 : 636.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1); Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6; Bacteria - 1472; Metazoa - 14; Fungi - 1146; Plants - 1414; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|34993 : 196.0) no description available & (p35338|pglr2_maize : 90.5) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1272.0) & (original description: Putative BnaA03g46290D, Description = BnaA03g46290D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04362_44942-52479' '(at5g04310 : 608.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 414.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 223.0) no description available & (reliability: 1216.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04407_223475-228361' '(at3g15720 : 298.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 269.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 253.0) no description available & (reliability: 596.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_264880-274630' '(at1g09910 : 712.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 221.0) no description available & (reliability: 1424.0) & (original description: Putative BnaC05g07390D, Description = BnaC05g07390D protein, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_279671-298906' '(at2g22620 : 695.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 173.0) no description available & (reliability: 1390.0) & (original description: Putative Os08g0554300, Description = Os08g0554300 protein, PFAM = PF06045;PF14686;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_550152-563247' '(at2g22620 : 710.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 220.0) no description available & (reliability: 1420.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF14683;PF06045;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf05514_53972-63875' '(at2g22620 : 683.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 198.0) no description available & (reliability: 1366.0) & (original description: Putative BnaC08g34880D, Description = BnaC08g34880D protein, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06023_378439-390386' '(at3g57790 : 566.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 3246 Blast hits to 3240 proteins in 468 species: Archae - 6; Bacteria - 1493; Metazoa - 3; Fungi - 347; Plants - 1297; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|34993 : 172.0) no description available & (reliability: 1132.0) & (original description: Putative Sb02g028280, Description = Putative uncharacterized protein Sb02g028280, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06164_115056-119097' '(at1g23760 : 648.0) Encodes aromatic rich glycoprotein JP630.; JP630; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 1783 Blast hits to 1423 proteins in 248 species: Archae - 0; Bacteria - 362; Metazoa - 287; Fungi - 197; Plants - 556; Viruses - 4; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|66831 : 266.0) no description available & (reliability: 1296.0) & (original description: Putative PGL3, Description = Polygalacturonase 1 beta-like protein 3, PFAM = PF03181)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06172_29221-34156' '(at1g14420 : 486.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 452.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 972.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF04431;PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06347_201762-208242' '(at3g07970 : 299.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 273.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 242.0) no description available & (reliability: 598.0) & (original description: Putative MPG3, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06437_469713-473928' '(at3g53190 : 499.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 360.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 222.0) no description available & (reliability: 998.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_60070-78167' '(at2g22620 : 694.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 233.0) no description available & (reliability: 1388.0) & (original description: Putative PGSC0003DMG400015675, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF14686;PF06045;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_68940-76760' '(at2g22620 : 603.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 233.0) no description available & (reliability: 1206.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF14686;PF14683;PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_111396-127744' '(at2g22620 : 759.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 246.0) no description available & (reliability: 1518.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF06045;PF14686;PF14683)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06999_178585-185180' '(at3g53190 : 617.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 384.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 224.0) no description available & (reliability: 1234.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07323_61332-67008' '(at1g23460 : 555.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 328.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 280.0) no description available & (reliability: 1110.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07382_138231-152299' '(at1g80170 : 459.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 344.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 286.0) no description available & (reliability: 918.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07402_735583-748126' '(gnl|cdd|69561 : 184.0) no description available & (at2g22620 : 150.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 300.0) & (original description: Putative Ccrd_012996, Description = Rhamnogalacturonate lyase, PFAM = PF06045)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07511_421176-439114' '(at1g09910 : 743.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 248.0) no description available & (reliability: 1486.0) & (original description: Putative PGSC0003DMG400014600, Description = Rhamnogalacturonate lyase, PFAM = PF06045;PF14683;PF14686)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07576_499977-504850' '(at3g61490 : 707.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 190.0) no description available & (p35338|pglr2_maize : 99.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1414.0) & (original description: Putative LOC100284735, Description = Glycoside hydrolase, family 28, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07829_109747-115359' '(at1g80170 : 509.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 363.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 297.0) no description available & (reliability: 1018.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf08637_34794-38899' '(at1g70370 : 742.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 289.0) no description available & (reliability: 1484.0) & (original description: Putative GP1, Description = Polygalacturonase-1 non-catalytic subunit beta, PFAM = PF03181)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09260_107478-113717' '(at1g48100 : 653.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4526 Blast hits to 4502 proteins in 576 species: Archae - 8; Bacteria - 1381; Metazoa - 30; Fungi - 1439; Plants - 1518; Viruses - 5; Other Eukaryotes - 145 (source: NCBI BLink). & (p35336|pglr_actch : 284.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 252.0) no description available & (reliability: 1306.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09438_46802-50495' '(p48979|pglr_prupe : 482.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 480.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 267.0) no description available & (reliability: 960.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09684_122022-126754' '(at2g33160 : 408.0) glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; FUNCTIONS IN: polygalacturonase activity, nucleic acid binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 4055 Blast hits to 4034 proteins in 453 species: Archae - 8; Bacteria - 853; Metazoa - 14; Fungi - 1250; Plants - 1822; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 333.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 278.0) no description available & (reliability: 816.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09698_179133-186619' '(p35336|pglr_actch : 502.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at2g41850 : 409.0) ADPG2.; polygalacturonase abscission zone A. thaliana (PGAZAT); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, floral organ abscission, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4465 Blast hits to 4447 proteins in 569 species: Archae - 8; Bacteria - 1510; Metazoa - 14; Fungi - 1290; Plants - 1500; Viruses - 5; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|84675 : 338.0) no description available & (reliability: 818.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf10058_5335-40988' '(p35336|pglr_actch : 419.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 395.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 302.0) no description available & (reliability: 790.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf10747_21241-28301' '(at3g55140 : 583.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47932 : 206.0) no description available & (p40972|pel_tobac : 156.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 1166.0) & (original description: Putative PL4, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12321_113202-118869' '(q05967|pglr_tobac : 542.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 379.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 333.0) no description available & (reliability: 758.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12321_119225-126116' '(q05967|pglr_tobac : 680.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84675 : 374.0) no description available & (at3g07820 : 370.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12680_125103-291029' '(at1g67750 : 639.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 231.0) no description available & (reliability: 1278.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12708_102150-106539' '(p48979|pglr_prupe : 463.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 449.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 262.0) no description available & (reliability: 898.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12708_166316-170499' '(at2g43880 : 454.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 375.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 279.0) no description available & (reliability: 908.0) & (original description: Putative BnaC04g49340D, Description = BnaC04g49340D protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12976_67430-72364' '(at1g17150 : 302.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 291.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 273.0) no description available & (reliability: 604.0) & (original description: Putative PG2C, Description = Exopolygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf13268_101696-110051' '(at3g55140 : 490.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47932 : 202.0) no description available & (p40972|pel_tobac : 142.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 980.0) & (original description: Putative PL4, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf13411_575763-586542' '(q05967|pglr_tobac : 537.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 375.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 344.0) no description available & (reliability: 750.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf14344_387-12764' '(at3g57790 : 577.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 3246 Blast hits to 3240 proteins in 468 species: Archae - 6; Bacteria - 1493; Metazoa - 3; Fungi - 347; Plants - 1297; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|34993 : 167.0) no description available & (reliability: 1154.0) & (original description: Putative At3g57790, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf14768_46139-50280' '(at4g24780 : 633.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 405.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 1266.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf15310_16925-22655' '(at4g18180 : 301.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39786|pglr_goshi : 262.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 261.0) no description available & (reliability: 602.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf16657_13794-22831' '(at3g42950 : 755.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 226.0) no description available & (p35339|pglr3_maize : 94.7) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1510.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf18696_62453-66161' '(p40972|pel_tobac : 558.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at3g01270 : 427.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 209.0) no description available & (reliability: 854.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf18696_80328-85176' '(at1g14420 : 456.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40972|pel_tobac : 405.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47932 : 229.0) no description available & (reliability: 912.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf19421_53768-58399' '(p40973|pel_lillo : 440.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at1g14420 : 433.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 212.0) no description available & (reliability: 866.0) & (original description: Putative AT59, Description = Probable pectate lyase 3, PFAM = PF04431;PF00544)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf28267_35086-44112' '(at3g15720 : 327.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 279.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 265.0) no description available & (reliability: 654.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T
'10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf28780_197832-200019' '(at5g06860 : 394.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p58822|pgip2_phavu : 304.0) Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35838 : 81.6) no description available & (reliability: 788.0) & (original description: Putative pgip, Description = Polygalacturonase inhibitor, PFAM = PF13855;PF00560;PF08263)' T
'10.6.1001' 'cell wall.degradation' '1,6-anhydroglucose' 'very tentative' M
'10.7' 'cell wall.modification' 'nbv0.3scaffold358_23294-48534' '(at4g30380 : 144.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold5512_29607-32859' '(q7xwu8|expa1_orysa : 360.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 353.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 98.7) no description available & (reliability: 706.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold6251_31724-34904' '(at5g39280 : 321.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (q40636|expa2_orysa : 275.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|86296 : 92.6) no description available & (reliability: 642.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold11786_38753-43467' '(at2g37640 : 416.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 383.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 98.0) no description available & (reliability: 832.0) & (original description: Putative EXPA3, Description = Expansin-A3, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold15657_4095-6701' '(q7xt40|exb15_orysa : 152.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (at1g65680 : 149.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative cim1, Description = Putative expansin-B2, PFAM = PF01357)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold25745_22983-28324' '(at5g13870 : 388.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39857|xth_soybn : 385.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (gnl|cdd|29536 : 288.0) no description available & (reliability: 776.0) & (original description: Putative PsEXT6, Description = Xyloglucan endotransglucosylase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold26285_431-4435' '(at5g57550 : 373.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 356.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 746.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold32129_17951-23639' '(at1g32170 : 405.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 257.0) no description available & (p93349|xth_tobac : 188.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 810.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold32749_1386-6662' '(at2g37640 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 340.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|86296 : 83.7) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold39512_32116-35800' '(at3g44990 : 374.0) xyloglucan endo-transglycosylase; xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29536 : 272.0) no description available & (p93349|xth_tobac : 184.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 748.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold42617_5200-9426' '(at5g57550 : 391.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 369.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 782.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.3scaffold102365_218-3490' '(at4g25810 : 395.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 389.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 335.0) no description available & (reliability: 790.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'nbv0.5scaffold87_434357-437168' '(at2g14620 : 138.0) xyloglucan endotransglucosylase/hydrolase 10 (XTH10); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2030 Blast hits to 2016 proteins in 268 species: Archae - 0; Bacteria - 182; Metazoa - 0; Fungi - 404; Plants - 1378; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|29536 : 126.0) no description available & (p35694|bru1_soybn : 96.7) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 276.0) & (original description: Putative XTH1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'nbv0.5scaffold1672_219756-223251' '(at2g18660 : 86.7) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.; plant natriuretic peptide A (PNP-A); LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: Barwin-related endoglucanase (TAIR:AT4G30380.1); Has 232 Blast hits to 231 proteins in 52 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 6; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Ave1, Description = Avirulent on Ve1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'nbv0.5scaffold2491_141039-144342' '(p93349|xth_tobac : 553.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 435.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 320.0) no description available & (reliability: 870.0) & (original description: Putative TfXTH2, Description = Xyloglucan endotransglycosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'nbv0.5scaffold3592_1250-4896' '(p35694|bru1_soybn : 396.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|29536 : 339.0) no description available & (reliability: 788.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben044scf00000443ctg007_706-4096' '(q7xwu8|expa1_orysa : 354.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 345.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 101.0) no description available & (reliability: 690.0) & (original description: Putative EXPA12, Description = Expansin-A12, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben044scf00001344ctg002_4627-8310' '(gnl|cdd|29536 : 173.0) no description available & (at4g13080 : 163.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39857|xth_soybn : 140.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 326.0) & (original description: Putative xth26, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben044scf00002007ctg003_1-2287' '(at1g65680 : 130.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 124.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben044scf00005020ctg002_1-3217' '(at1g12560 : 331.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 326.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 86.0) no description available & (reliability: 662.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben044scf00008871ctg006_1-2003' '(at4g25810 : 396.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 395.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 339.0) no description available & (reliability: 792.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben044scf00008944ctg014_1-2208' '(at4g28850 : 378.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 304.0) no description available & (q39857|xth_soybn : 262.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 756.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben044scf00011133ctg008_774-5131' '(p35694|bru1_soybn : 435.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g14130 : 415.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (reliability: 830.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben044scf00012858ctg009_139-4077' '(at4g13090 : 246.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q8lnz5|xthb_phaan : 211.0) Probable xyloglucan endotransglucosylase/hydrolase protein B precursor (EC 2.4.1.207) (VaXTH2) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (gnl|cdd|29536 : 207.0) no description available & (reliability: 492.0) & (original description: Putative xth21, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben044scf00014150ctg005_5956-17069' '(at5g39280 : 322.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 270.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 92.6) no description available & (reliability: 644.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben044scf00019839ctg013_2775-9114' '(at2g40610 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 305.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 106.0) no description available & (reliability: 640.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben044scf00033546ctg001_16602-19937' '(at1g65680 : 144.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 140.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben044scf00040433ctg004_14433-22752' '(at4g30380 : 142.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben044scf00044931ctg006_1-2653' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (p35694|bru1_soybn : 321.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 696.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben044scf00048158ctg007_1-3311' '(at5g57550 : 351.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 330.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 702.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben044scf00056847ctg001_456-2756' '(at1g12560 : 333.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 326.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 86.0) no description available & (reliability: 666.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben044scf00059769ctg001_1167-4487' '(at2g03090 : 361.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 317.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 112.0) no description available & (reliability: 722.0) & (original description: Putative EXPA1, Description = Expansin-A1, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101ctg13782_1-2126' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 388.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 333.0) no description available & (reliability: 788.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00063_1025822-1030275' '(at2g03090 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zgu9|expa5_orysa : 320.0) Expansin-A5 precursor (OsEXPA5) (Alpha-expansin-5) (OsEXP5) (OsaEXPa1.20) - Oryza sativa (Rice) & (gnl|cdd|85405 : 107.0) no description available & (reliability: 704.0) & (original description: Putative EXPA15, Description = Expansin-A15, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00073_104254-107693' '(at1g65680 : 146.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 144.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 292.0) & (original description: Putative expB, Description = Barwin-like endoglucanase, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf00103_63371-66535' '(at2g40610 : 284.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p93442|expa4_orysa : 276.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|86296 : 85.3) no description available & (reliability: 568.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00176_923827-928133' '(at1g11545 : 348.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 247.0) no description available & (p93349|xth_tobac : 211.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 696.0) & (original description: Putative xth13, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00369_573002-577299' '(p93349|xth_tobac : 617.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 449.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 319.0) no description available & (reliability: 898.0) & (original description: Putative XTH, Description = Probable xyloglucan endotransglucosylase/hydrolase protein, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00397_843851-847750' '(at1g65680 : 293.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 290.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.5) no description available & (reliability: 586.0) & (original description: Putative cim1, Description = Cytokinin induced message, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00457_1309948-1313867' '(at2g36870 : 474.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (gnl|cdd|29536 : 273.0) no description available & (p93349|xth_tobac : 191.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 948.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf00490_150743-153927' '(at1g12560 : 333.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 322.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 87.9) no description available & (reliability: 666.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00526_353203-381348' '(q850k7|exlb1_orysa : 299.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (at4g17030 : 173.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf00527_709857-713918' '(at2g45110 : 221.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B4 (EXPB4); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: beta expansin 6 (TAIR:AT1G65681.1); Has 2182 Blast hits to 2179 proteins in 176 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 32; Plants - 2098; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q6h676|exb11_orysa : 221.0) Expansin-B11 precursor (OsEXPB11) (Beta-expansin-11) (OsaEXPb1.20) - Oryza sativa (Rice) & (gnl|cdd|85405 : 108.0) no description available & (reliability: 442.0) & (original description: Putative EXPB1, Description = Expansin-B1, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00536_403547-407792' '(at1g11545 : 444.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 310.0) no description available & (p93349|xth_tobac : 265.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 888.0) & (original description: Putative xth19, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00539_296525-300892' '(q7xwu8|expa1_orysa : 355.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 101.0) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf00614_105806-111077' '(at4g17030 : 291.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q850k7|exlb1_orysa : 179.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (reliability: 582.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00640_406467-412980' '(at4g28250 : 369.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 330.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (gnl|cdd|85405 : 101.0) no description available & (reliability: 738.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00663_459059-470164' '(at4g25810 : 367.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 361.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 734.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00773_646308-649937' '(at2g40610 : 354.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 339.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 115.0) no description available & (reliability: 708.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf00780_375-4326' '(at3g45970 : 290.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A1 (EXLA1); INVOLVED IN: unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A3 (TAIR:AT3G45960.2); Has 1876 Blast hits to 1873 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q10s70|exla1_orysa : 285.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative EXLA2, Description = Expansin-like A2, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf00887_435072-438273' '(at4g03210 : 336.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29536 : 336.0) no description available & (q41542|xth_wheat : 298.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 672.0) & (original description: Putative XTH6, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 6, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf00953_538053-543024' '(at2g14620 : 408.0) xyloglucan endotransglucosylase/hydrolase 10 (XTH10); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2030 Blast hits to 2016 proteins in 268 species: Archae - 0; Bacteria - 182; Metazoa - 0; Fungi - 404; Plants - 1378; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|29536 : 300.0) no description available & (q41542|xth_wheat : 265.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 816.0) & (original description: Putative XTH10, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 10, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf00984_414588-419915' '(at1g14720 : 448.0) member of Glycoside Hydrolase Family 16; xyloglucan endotransglucosylase/hydrolase 28 (XTH28); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: fruit development, stamen filament development; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: endoxyloglucan transferase A3 (TAIR:AT2G01850.1); Has 2041 Blast hits to 2031 proteins in 289 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 395; Plants - 1341; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|29536 : 277.0) no description available & (p93349|xth_tobac : 183.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative XTH28, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 28, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf00996_274304-277803' '(at4g14130 : 356.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 353.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 332.0) no description available & (reliability: 712.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf01025_1043143-1047962' '(at2g37640 : 384.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 371.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 96.0) no description available & (reliability: 768.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01111_90505-94685' '(at1g12560 : 330.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 320.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 85.6) no description available & (reliability: 660.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01143_1202150-1205591' '(at5g39280 : 323.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 274.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 93.7) no description available & (reliability: 646.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01237_899740-904402' '(q7xt39|expb5_orysa : 97.4) Expansin-B5 precursor (OsEXPB5) (Beta-expansin-5) (OsaEXPb1.19) - Oryza sativa (Rice) & (at3g60570 : 91.7) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B5 (EXPB5); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 1985 Blast hits to 1982 proteins in 144 species: Archae - 0; Bacteria - 10; Metazoa - 1; Fungi - 27; Plants - 1928; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|85405 : 80.2) no description available & (reliability: 183.4) & (original description: Putative PGSC0003DMG400011638, Description = Expansin B2, BETA 1.4, PFAM = PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf01237_1355423-1361762' '(at2g40610 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 305.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 106.0) no description available & (reliability: 640.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01320_381225-387272' '(at3g03220 : 415.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A13 (EXPA13); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2069 Blast hits to 2066 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2056; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q7xud0|exp10_orysa : 345.0) Expansin-A10 precursor (OsEXPA10) (Alpha-expansin-10) (OsEXP10) (OsaEXPa1.28) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.9) no description available & (reliability: 830.0) & (original description: Putative EXPA13, Description = Expansin-A13, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01436_181907-211896' '(at1g65680 : 147.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 142.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01436_207966-211983' '(at1g65680 : 185.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 179.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 81.4) no description available & (reliability: 370.0) & (original description: Putative cim1, Description = Barwin-like endoglucanase, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf01591_28500-35914' '(at5g57550 : 340.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 317.0) no description available & (p35694|bru1_soybn : 316.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 680.0) & (original description: Putative xet1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf01685_1186904-1190867' '(at4g03210 : 452.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29536 : 314.0) no description available & (q39857|xth_soybn : 305.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 904.0) & (original description: Putative XTH9, Description = Xyloglucan endotransglucosylase/hydrolase protein 9, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf01959_493883-498502' '(at3g15370 : 306.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 12 (EXPA12); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A17 (TAIR:AT4G01630.1); Has 2144 Blast hits to 2141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 40; Plants - 2066; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q7xwu8|expa1_orysa : 235.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (gnl|cdd|85405 : 90.6) no description available & (reliability: 612.0) & (original description: Putative EXPA12, Description = Expansin-A12, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf02413_186870-192308' '(at5g57550 : 379.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 364.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 758.0) & (original description: Putative XTH25, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 25, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf02413_227990-234096' '(at5g57550 : 358.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 331.0) no description available & (p35694|bru1_soybn : 329.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 716.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf02552_289661-292925' '(q7xwu8|expa1_orysa : 360.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 350.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 98.7) no description available & (reliability: 700.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf02860_179478-183886' '(at1g11545 : 444.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 311.0) no description available & (p93349|xth_tobac : 265.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 888.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf02990_518438-521944' '(at4g37800 : 473.0) xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29536 : 332.0) no description available & (p93349|xth_tobac : 305.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 946.0) & (original description: Putative XTH6, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 6, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf02990_637140-640620' '(at4g37800 : 475.0) xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p93349|xth_tobac : 304.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 950.0) & (original description: Putative XTH7, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 7, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf03056_191348-194735' '(at5g39280 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (q852a1|expa7_orysa : 278.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|86296 : 91.8) no description available & (reliability: 640.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03128_784307-788065' '(q4pr43|exp23_orysa : 361.0) Expansin-A23 precursor (OsEXPA23) (Alpha-expansin-23) (OsEXP23) (OsaEXPa1.12) - Oryza sativa (Rice) & (at1g20190 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 99.9) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03170_124746-128816' '(gnl|cdd|29536 : 223.0) no description available & (at4g13080 : 218.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41542|xth_wheat : 186.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 436.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf03284_1-2330' '(at4g30380 : 145.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03545_182221-187484' '(at2g39700 : 423.0) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q852a1|expa7_orysa : 409.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 101.0) no description available & (reliability: 846.0) & (original description: Putative exp9, Description = Expansin9, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03638_102223-107920' '(at1g32170 : 408.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 257.0) no description available & (p93349|xth_tobac : 188.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 816.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf03644_168288-172320' '(at1g65680 : 247.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 244.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 98.0) no description available & (reliability: 494.0) & (original description: Putative cim1, Description = Cytokinin induced message, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03644_168825-170620' '(at1g65680 : 133.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 126.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (reliability: 266.0) & (original description: Putative cim1, Description = Expansin B protein, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf03852_70426-74003' '(at4g17030 : 270.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q850k7|exlb1_orysa : 185.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf03898_368891-372676' '(at1g11545 : 438.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 307.0) no description available & (p93349|xth_tobac : 266.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 876.0) & (original description: Putative XTH8, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 8, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf03913_225186-229758' '(at4g38400 : 265.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A2 (EXLA2); INVOLVED IN: response to cyclopentenone, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A1 (TAIR:AT3G45970.1); Has 1877 Blast hits to 1874 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1869; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q10s70|exla1_orysa : 241.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative EXLA1, Description = Expansin-like A1, PFAM = PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf04102_391109-395542' '(at4g28250 : 382.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 366.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (gnl|cdd|85405 : 102.0) no description available & (reliability: 764.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf04124_6481-9876' '(q6h677|exb14_orysa : 208.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (at1g65680 : 189.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf04392_426191-431777' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 371.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 336.0) no description available & (reliability: 788.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf04557_38449-42317' '(at3g44990 : 372.0) xyloglucan endo-transglycosylase; xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29536 : 273.0) no description available & (p93349|xth_tobac : 185.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 744.0) & (original description: Putative XTH31, Description = Xyloglucan endotransglucosylase/hydrolase protein 31, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf04643_399226-403180' '(at2g36870 : 453.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (gnl|cdd|29536 : 272.0) no description available & (p93349|xth_tobac : 195.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 906.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf04829_91907-98853' '(at4g28850 : 357.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 291.0) no description available & (p35694|bru1_soybn : 270.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 714.0) & (original description: Putative XTH26, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 26, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf04829_271313-299330' '(at4g28850 : 377.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 302.0) no description available & (q39857|xth_soybn : 261.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 754.0) & (original description: Putative XTH26, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 26, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf05060_738298-741963' '(at2g03090 : 308.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 290.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 111.0) no description available & (reliability: 616.0) & (original description: Putative EXPA10, Description = Expansin-A10, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf05702_309186-312242' '(at3g23730 : 380.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p35694|bru1_soybn : 358.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 760.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf06275_234380-237776' '(at4g30380 : 84.3) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative EGC1, Description = AtEXPR2, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf06482_196798-201213' '(at2g37640 : 419.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 386.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 96.4) no description available & (reliability: 838.0) & (original description: Putative EXPA3, Description = Expansin-A3, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf06848_323123-327350' '(at3g25050 : 241.0) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.; xyloglucan endotransglucosylase/hydrolase 3 (XTH3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: photoperiodism, flowering, plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 2162 Blast hits to 2140 proteins in 309 species: Archae - 0; Bacteria - 288; Metazoa - 0; Fungi - 427; Plants - 1372; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29536 : 235.0) no description available & (q41542|xth_wheat : 202.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 482.0) & (original description: Putative XTH3, Description = Xyloglucan endotransglucosylase/hydrolase protein 3, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf07231_464027-467908' '(at2g03090 : 354.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40636|expa2_orysa : 314.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 109.0) no description available & (reliability: 708.0) & (original description: Putative EXPA15, Description = Expansin-A15, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf07244_60647-63772' '(at4g14130 : 362.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 357.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 724.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf07325_31411-34811' '(at5g39280 : 296.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 250.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|86296 : 90.6) no description available & (reliability: 592.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf08047_116697-120748' '(at3g45970 : 331.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A1 (EXLA1); INVOLVED IN: unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A3 (TAIR:AT3G45960.2); Has 1876 Blast hits to 1873 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q10s70|exla1_orysa : 308.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 662.0) & (original description: Putative EXLA1, Description = Expansin-like A1, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf08633_67723-72703' '(at1g10550 : 377.0) Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.; xyloglucan:xyloglucosyl transferase 33 (XTH33); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth; LOCATED IN: integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2022 Blast hits to 2008 proteins in 287 species: Archae - 0; Bacteria - 257; Metazoa - 0; Fungi - 351; Plants - 1343; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|29536 : 253.0) no description available & (p93349|xth_tobac : 201.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 754.0) & (original description: Putative XTH33, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 33, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf08899_87481-100604' '(gnl|cdd|29536 : 171.0) no description available & (at4g13080 : 163.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93349|xth_tobac : 138.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 326.0) & (original description: Putative xth26, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf09075_425358-429072' '(at5g65730 : 464.0) xyloglucan endotransglucosylase/hydrolase 6 (XTH6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p93349|xth_tobac : 300.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative XTH7, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf09099_125057-153885' '(at4g13090 : 245.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q41638|xtha_phaan : 211.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (gnl|cdd|29536 : 211.0) no description available & (reliability: 490.0) & (original description: Putative xth21, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf09260_117812-123151' '(at2g01850 : 451.0) EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.; endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|29536 : 289.0) no description available & (p93349|xth_tobac : 201.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 902.0) & (original description: Putative XTH27, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 27, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf09284_92198-95562' '(q850k7|exlb1_orysa : 315.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (at4g17030 : 197.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf09711_54847-59673' '(at1g32170 : 422.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 277.0) no description available & (q41638|xtha_phaan : 198.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 844.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf09816_126654-129329' '(at2g18660 : 89.4) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.; plant natriuretic peptide A (PNP-A); LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: Barwin-related endoglucanase (TAIR:AT4G30380.1); Has 232 Blast hits to 231 proteins in 52 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 6; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Ave1, Description = Avirulent on Ve1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf09938_155660-158136' '(q6h677|exb14_orysa : 130.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (at2g45110 : 118.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B4 (EXPB4); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: beta expansin 6 (TAIR:AT1G65681.1); Has 2182 Blast hits to 2179 proteins in 176 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 32; Plants - 2098; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative cim1, Description = Putative expansin-B14, PFAM = PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf10385_86454-92086' '(at3g03220 : 410.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A13 (EXPA13); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2069 Blast hits to 2066 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2056; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q7xud0|exp10_orysa : 340.0) Expansin-A10 precursor (OsEXPA10) (Alpha-expansin-10) (OsEXP10) (OsaEXPa1.28) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.5) no description available & (reliability: 820.0) & (original description: Putative EXPA13, Description = Expansin-A13, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf10785_75440-81807' '(q8lnz5|xthb_phaan : 473.0) Probable xyloglucan endotransglucosylase/hydrolase protein B precursor (EC 2.4.1.207) (VaXTH2) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (at5g13870 : 462.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 320.0) no description available & (reliability: 924.0) & (original description: Putative XTHB, Description = Probable xyloglucan endotransglucosylase/hydrolase protein B, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf11124_102243-108114' '(at4g13090 : 339.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|29536 : 295.0) no description available & (q41638|xtha_phaan : 279.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 678.0) & (original description: Putative XTH2, Description = Xyloglucan endotransglucosylase/hydrolase protein 2, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf11767_216562-219520' '(at4g30380 : 149.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf12954_168658-173215' '(p93349|xth_tobac : 608.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 449.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 319.0) no description available & (reliability: 898.0) & (original description: Putative XTH, Description = Probable xyloglucan endotransglucosylase/hydrolase protein, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf13833_113545-117792' '(at2g39700 : 423.0) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q852a1|expa7_orysa : 408.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 100.0) no description available & (reliability: 846.0) & (original description: Putative exp9, Description = Expansin9, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf14470_7844-10954' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p35694|bru1_soybn : 319.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 696.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.7' 'cell wall.modification' 'niben101scf15065_3621-7101' '(at1g11545 : 409.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 300.0) no description available & (p93349|xth_tobac : 255.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 818.0) & (original description: Putative XTH8, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 8, PFAM = PF00722;PF06955)' T
'10.7' 'cell wall.modification' 'niben101scf20887_55177-58353' '(p93442|expa4_orysa : 318.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (at2g40610 : 316.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|85405 : 106.0) no description available & (reliability: 632.0) & (original description: Putative EXPA2, Description = Expansin-A2, PFAM = PF03330;PF01357)' T
'10.7' 'cell wall.modification' 'niben101scf25578_32004-35534' '(at2g03090 : 262.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 236.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 109.0) no description available & (reliability: 524.0) & (original description: Putative EXPA1, Description = Expansin-A1, PFAM = PF01357;PF03330)' T
'10.7' 'cell wall.modification' 'niben101scf28230_47392-51741' '(p35694|bru1_soybn : 446.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at3g23730 : 425.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 326.0) no description available & (reliability: 850.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T
'10.8' 'cell wall.pectin*esterases' '' ''
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold4760_8793-13641' '(at5g27870 : 556.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q42920|pme_medsa : 396.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1112.0) & (original description: Putative PME28, Description = Putative pectinesterase/pectinesterase inhibitor 28, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold5504_37589-40176' '(gnl|cdd|85238 : 205.0) no description available & (at5g27870 : 169.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43062|pme_prupe : 147.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 338.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold6755_51525-56935' '(at5g09760 : 615.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 399.0) no description available & (o04887|pme2_citsi : 296.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1230.0) & (original description: Putative PGSC0003DMG400028674, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold7078_52430-57477' '(at1g76160 : 792.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (q00624|aso_brana : 556.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1504.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold16806_13565-19012' '(at5g53370 : 785.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 509.0) no description available & (p83948|pme3_citsi : 462.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1570.0) & (original description: Putative PME61, Description = Probable pectinesterase/pectinesterase inhibitor 61, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 562.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold28650_1-4231' '(at2g36710 : 354.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 237.0) no description available & (q43062|pme_prupe : 141.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 708.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold42436_7660-13011' '(at5g47500 : 376.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 162.0) no description available & (p83948|pme3_citsi : 107.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 752.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold42880_15305-18095' '(at1g05310 : 197.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 106.0) no description available & (reliability: 394.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold75837_3481-7817' '(at5g55590 : 396.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 265.0) no description available & (p83948|pme3_citsi : 164.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 792.0) & (original description: Putative QRT1, Description = Pectinesterase QRT1, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold101800_1-3620' '(at2g47030 : 405.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p41510|pme_brana : 371.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (gnl|cdd|85238 : 352.0) no description available & (reliability: 810.0) & (original description: Putative PGSC0003DMG400005208, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold3_1370010-1373975' '(at5g27870 : 554.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q42920|pme_medsa : 454.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1108.0) & (original description: Putative PME21, Description = Probable pectinesterase/pectinesterase inhibitor 21, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold934_462469-466634' '(at2g47030 : 440.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 407.0) no description available & (p41510|pme_brana : 389.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 880.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold4241_33245-37906' '(at2g26450 : 308.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|85238 : 288.0) no description available & (q43111|pme3_phavu : 245.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 616.0) & (original description: Putative PME28, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold4619_1554-6760' '(at5g53370 : 766.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 516.0) no description available & (q43062|pme_prupe : 456.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1532.0) & (original description: Putative PME34, Description = Probable pectinesterase/pectinesterase inhibitor 34, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6574_25673-29499' '(at5g04960 : 562.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 492.0) no description available & (q43111|pme3_phavu : 477.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1124.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6576_91849-98432' '(at2g21610 : 376.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 266.0) no description available & (q43062|pme_prupe : 166.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 752.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6795_6734-13428' '(at5g47500 : 540.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 234.0) no description available & (p83948|pme3_citsi : 152.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1080.0) & (original description: Putative PME68, Description = Probable pectinesterase 68, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00001373ctg013_57208-61310' '(at3g05610 : 478.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 468.0) no description available & (q42920|pme_medsa : 396.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 956.0) & (original description: Putative PPE1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 858.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 536.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 834.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005957ctg005_11667-15683' '(at4g02300 : 518.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 517.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 940.0) & (original description: Putative PME39, Description = Probable pectinesterase/pectinesterase inhibitor 39, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00009648ctg000_1545-4769' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g43270 : 287.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 44 (TAIR:AT4G33220.1); Has 2924 Blast hits to 2864 proteins in 331 species: Archae - 6; Bacteria - 617; Metazoa - 1; Fungi - 199; Plants - 2076; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00013388ctg011_73-4055' '(at5g04960 : 583.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q43111|pme3_phavu : 484.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1166.0) & (original description: Putative PME24, Description = Putative pectinesterase/pectinesterase inhibitor 24, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00013968ctg008_23775-27818' '(gnl|cdd|85238 : 492.0) no description available & (at2g26450 : 470.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p83948|pme3_citsi : 433.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 940.0) & (original description: Putative PME13, Description = Probable pectinesterase/pectinesterase inhibitor 13, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00014250ctg006_1-4047' '(at3g17060 : 249.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 148.0) no description available & (p83948|pme3_citsi : 107.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 498.0) & (original description: Putative PME10, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00016578ctg009_2-3004' '(at5g09760 : 317.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 111.0) no description available & (p83218|pme_dauca : 81.3) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 634.0) & (original description: Putative PME51, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00019474ctg000_1-3925' '(at2g21610 : 436.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 283.0) no description available & (p83948|pme3_citsi : 181.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 872.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00026099ctg003_2560-7412' '(at1g02810 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 478.0) no description available & (q43062|pme_prupe : 364.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1248.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00028198ctg002_6646-12271' '(at1g76160 : 819.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 617.0) no description available & (p29162|ntp3_tobac : 580.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 144.0) no description available & (reliability: 1552.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00028683ctg000_1-1441' '(at5g53370 : 410.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 378.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 820.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00035242ctg008_1-4901' '(at3g05620 : 712.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 488.0) no description available & (q43062|pme_prupe : 475.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1424.0) & (original description: Putative PME22, Description = Putative pectinesterase/pectinesterase inhibitor 22, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00094_36263-43372' '(at3g05610 : 494.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 435.0) no description available & (q42920|pme_medsa : 412.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 988.0) & (original description: Putative per, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00176_1017072-1021195' '(at1g11580 : 648.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 536.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1296.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00240_381895-386953' '(at1g53840 : 641.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q43111|pme3_phavu : 637.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|85238 : 464.0) no description available & (reliability: 1282.0) & (original description: Putative MPE3, Description = Pectinesterase 3, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00342_63936-74582' '(gnl|cdd|85238 : 416.0) no description available & (at2g26450 : 412.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p83948|pme3_citsi : 334.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 824.0) & (original description: Putative Sb07g022100, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00369_1880587-1885435' '(at5g27870 : 555.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 475.0) no description available & (q42920|pme_medsa : 397.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1110.0) & (original description: Putative PME21, Description = Probable pectinesterase/pectinesterase inhibitor 21, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00446_654508-660350' '(at5g09760 : 668.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 402.0) no description available & (o04887|pme2_citsi : 283.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1336.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00454_544103-549785' '(at5g07410 : 400.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G69940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85238 : 245.0) no description available & (p83948|pme3_citsi : 169.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 800.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00465_324926-329024' '(at2g47030 : 370.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 368.0) no description available & (p41510|pme_brana : 353.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 740.0) & (original description: Putative PGSC0003DMG400005208, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 546.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00893_98080-102144' '(at2g21610 : 430.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 281.0) no description available & (p83218|pme_dauca : 186.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 860.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01022_264706-279461' '(at3g17060 : 440.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 249.0) no description available & (p83948|pme3_citsi : 167.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 880.0) & (original description: Putative PME67, Description = Probable pectinesterase 67, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01559_162944-172533' '(at1g05310 : 392.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 243.0) no description available & (p83218|pme_dauca : 140.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 784.0) & (original description: Putative PME3, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01623_205927-213512' '(at4g02320 : 533.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 512.0) no description available & (p83948|pme3_citsi : 508.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 972.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01773_502677-506546' '(at2g47030 : 395.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p41510|pme_brana : 367.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (gnl|cdd|85238 : 352.0) no description available & (reliability: 790.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01927_380119-387528' '(at5g19730 : 578.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 293.0) no description available & (p83948|pme3_citsi : 184.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1156.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02066_629518-633624' '(at5g49180 : 554.0) Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.; Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, developing seed stage, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G06830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 493.0) no description available & (q42920|pme_medsa : 439.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1108.0) & (original description: Putative PME58, Description = Probable pectinesterase/pectinesterase inhibitor 58, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02111_1618250-1625810' '(at3g17060 : 429.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 249.0) no description available & (p83948|pme3_citsi : 170.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 858.0) & (original description: Putative PME67, Description = Probable pectinesterase 67, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02125_206173-209289' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 291.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g05620 : 290.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative PGSC0003DMG400019198, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02502_1020511-1031870' '(at2g36710 : 434.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 282.0) no description available & (q43062|pme_prupe : 172.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 868.0) & (original description: Putative PME15, Description = Probable pectinesterase 15, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02502_1020996-1031891' '(at2g36710 : 429.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 281.0) no description available & (q43062|pme_prupe : 171.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 858.0) & (original description: Putative PME14, Description = Putative pectinesterase 14, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02807_1009744-1015125' '(at1g05310 : 482.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 270.0) no description available & (p83948|pme3_citsi : 155.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 964.0) & (original description: Putative PME8, Description = Probable pectinesterase 8, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02830_169655-174406' '(at5g04960 : 540.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 502.0) no description available & (q43111|pme3_phavu : 460.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1080.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02864_1180961-1190325' '(gnl|cdd|85238 : 407.0) no description available & (at2g26440 : 310.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 306.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 620.0) & (original description: Putative pme5, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02930_22790-29378' '(at3g10720 : 649.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q43062|pme_prupe : 394.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1298.0) & (original description: Putative PME25, Description = Probable pectinesterase/pectinesterase inhibitor 25, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02949_1542678-1547024' '(at4g02330 : 549.0) ATPMEPCRB; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G02810.1); Has 2755 Blast hits to 2700 proteins in 321 species: Archae - 8; Bacteria - 597; Metazoa - 1; Fungi - 199; Plants - 1923; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 490.0) no description available & (o04887|pme2_citsi : 424.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1098.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03046_284035-290555' '(at2g36710 : 439.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 295.0) no description available & (q43062|pme_prupe : 180.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 878.0) & (original description: Putative PME15, Description = Probable pectinesterase 15, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03091_80483-86456' '(at5g47500 : 540.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 235.0) no description available & (p83948|pme3_citsi : 153.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1080.0) & (original description: Putative PME68, Description = Probable pectinesterase 68, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03129_802772-807042' '(at5g27870 : 562.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 497.0) no description available & (q42920|pme_medsa : 428.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1124.0) & (original description: Putative PME58, Description = Probable pectinesterase/pectinesterase inhibitor 58, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03141_1112722-1118204' '(at1g76160 : 807.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 607.0) no description available & (q00624|aso_brana : 542.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 138.0) no description available & (reliability: 1592.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03203_779804-784505' '(at5g09760 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 398.0) no description available & (o04887|pme2_citsi : 316.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1248.0) & (original description: Putative PGSC0003DMG400031349, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03488_918685-925484' '(at3g24130 : 325.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 245.0) no description available & (p83948|pme3_citsi : 145.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 650.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03595_1548643-1552532' '(at5g04960 : 585.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 498.0) no description available & (q43111|pme3_phavu : 481.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1170.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03706_180131-191172' '(gnl|cdd|85238 : 534.0) no description available & (at4g02320 : 531.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p83948|pme3_citsi : 522.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1006.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03823_146027-152333' '(p83948|pme3_citsi : 833.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (at3g14310 : 810.0) encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.; pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 543.0) no description available & (reliability: 1620.0) & (original description: Putative PMEU1, Description = Pectinesterase/pectinesterase inhibitor U1, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03823_163066-167878' '(q43111|pme3_phavu : 632.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g53840 : 626.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 469.0) no description available & (reliability: 1252.0) & (original description: Putative MPE3, Description = Pectinesterase 3, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04081_192589-199032' '(at5g04960 : 542.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 502.0) no description available & (q43111|pme3_phavu : 461.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1084.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04113_706061-710356' '(at2g21610 : 372.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 262.0) no description available & (q43062|pme_prupe : 163.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 744.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04711_103725-111530' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p29162|ntp3_tobac : 578.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1706.0) & (original description: Putative sks7, Description = SKU5 similar 7 protein, PFAM = PF07731;PF00394;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05062_95325-99641' '(at2g26440 : 606.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 475.0) no description available & (q43062|pme_prupe : 375.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1212.0) & (original description: Putative PME12, Description = Probable pectinesterase/pectinesterase inhibitor 12, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05385_250978-258812' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (q00624|aso_brana : 574.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1706.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF00394;PF07731;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05551_438840-441667' '(at1g53840 : 122.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|86518 : 101.0) no description available & (q43111|pme3_phavu : 97.1) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 244.0) & (original description: Putative PGSC0003DMG400018145, Description = Pectinesterase, PFAM = PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05772_89510-92869' '(at5g55590 : 390.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 264.0) no description available & (p83948|pme3_citsi : 165.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 780.0) & (original description: Putative QRT1, Description = Pectinesterase QRT1, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06412_354901-375933' '(at5g19730 : 305.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 293.0) no description available & (p83948|pme3_citsi : 186.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 610.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06556_1139590-1144527' '(at3g05610 : 474.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 471.0) no description available & (q42920|pme_medsa : 395.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 948.0) & (original description: Putative PPE1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06556_1210660-1214707' '(at5g27870 : 561.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q42920|pme_medsa : 454.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1122.0) & (original description: Putative per, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06639_176569-181841' '(at5g53370 : 766.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 513.0) no description available & (p83948|pme3_citsi : 456.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1532.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06650_26318-31211' '(at1g02810 : 652.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 482.0) no description available & (o04887|pme2_citsi : 363.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1304.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06954_400085-406497' '(at3g24130 : 369.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 240.0) no description available & (p83948|pme3_citsi : 164.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 738.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07034_984147-987837' '(at5g19730 : 460.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 280.0) no description available & (p83948|pme3_citsi : 179.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 920.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07304_61788-69140' '(at4g33220 : 629.0) pectin methylesterase 44 (PME44); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2773 Blast hits to 2721 proteins in 324 species: Archae - 6; Bacteria - 597; Metazoa - 1; Fungi - 196; Plants - 1948; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q43062|pme_prupe : 626.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (gnl|cdd|85238 : 508.0) no description available & (reliability: 1258.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07680_275154-280119' '(at2g26450 : 417.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|85238 : 417.0) no description available & (p83948|pme3_citsi : 333.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 834.0) & (original description: Putative PME45, Description = Putative pectinesterase/pectinesterase inhibitor 45, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf08047_296441-332148' '(at1g76160 : 826.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 619.0) no description available & (p29162|ntp3_tobac : 583.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 143.0) no description available & (reliability: 1566.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf08723_116967-120622' '(gnl|cdd|85238 : 314.0) no description available & (at4g02300 : 266.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 238.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 498.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf09345_6918-10428' '(gnl|cdd|85238 : 317.0) no description available & (at4g02320 : 269.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (o04887|pme2_citsi : 244.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 500.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf09513_4471-14743' '(at3g29090 : 555.0) Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification.; pectin methylesterase 31 (PME31); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2575 Blast hits to 2532 proteins in 376 species: Archae - 8; Bacteria - 733; Metazoa - 1; Fungi - 195; Plants - 1611; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 277.0) no description available & (p83218|pme_dauca : 182.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 1110.0) & (original description: Putative PME31, Description = Pectinesterase 31, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf10541_47791-52071' '(at1g11580 : 631.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 537.0) no description available & (p83948|pme3_citsi : 457.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1262.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf10737_595-6381' '(at3g24130 : 360.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 214.0) no description available & (p41510|pme_brana : 145.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 720.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11177_70792-79299' '(at5g53370 : 749.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 526.0) no description available & (p83948|pme3_citsi : 453.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1498.0) & (original description: Putative PME61, Description = Probable pectinesterase/pectinesterase inhibitor 61, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11289_56932-60012' '(gnl|cdd|85238 : 355.0) no description available & (q43062|pme_prupe : 286.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at2g26440 : 277.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11490_52776-59895' '(at1g11580 : 551.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 544.0) no description available & (q43062|pme_prupe : 464.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1102.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf12339_11051-17081' '(p83948|pme3_citsi : 771.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (at3g14310 : 724.0) encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.; pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 539.0) no description available & (reliability: 1448.0) & (original description: Putative PMEU1, Description = Pectinesterase/pectinesterase inhibitor U1, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 750.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 608.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf18648_112477-116374' '(at5g55590 : 250.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 166.0) no description available & (o04887|pme2_citsi : 113.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 500.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf18704_124081-130851' '(at4g02320 : 521.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 510.0) no description available & (p83948|pme3_citsi : 507.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 966.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf19584_15106-18893' '(at1g02810 : 655.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 480.0) no description available & (o04887|pme2_citsi : 383.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1310.0) & (original description: Putative PME7, Description = Probable pectinesterase/pectinesterase inhibitor 7, PFAM = PF01095;PF04043)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf21138_147191-152169' '(at5g09760 : 714.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 414.0) no description available & (p83948|pme3_citsi : 298.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1428.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34287_2302-7851' '(at4g22010 : 737.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p29162|ntp3_tobac : 530.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 141.0) no description available & (reliability: 1402.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34287_11700-16691' '(at1g76160 : 786.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 612.0) no description available & (q00624|aso_brana : 554.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1502.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T
'10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34798_75898-80063' '(at2g47030 : 444.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 407.0) no description available & (p41510|pme_brana : 393.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 888.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF04043;PF01095)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold32310_6851-15551' '(at4g19410 : 151.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 302.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold33294_7002-16640' '(at3g09410 : 530.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 546 Blast hits to 540 proteins in 92 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|39488 : 523.0) no description available & (gnl|cdd|66926 : 493.0) no description available & (reliability: 1060.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold67124_645-6334' '(gnl|cdd|66926 : 357.0) no description available & (gnl|cdd|39488 : 346.0) no description available & (at4g19420 : 333.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative BnaC03g35940D, Description = BnaC03g35940D protein, PFAM = PF03283;PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold84_895510-902072' '(gnl|cdd|66926 : 339.0) no description available & (gnl|cdd|39488 : 332.0) no description available & (at4g19410 : 311.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 622.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold257_239233-245988' '(gnl|cdd|66926 : 356.0) no description available & (gnl|cdd|39488 : 339.0) no description available & (at4g19420 : 335.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold1526_329005-366653' '(gnl|cdd|66926 : 368.0) no description available & (at4g19420 : 350.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39488 : 349.0) no description available & (reliability: 700.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold6879_78109-84691' '(gnl|cdd|39488 : 637.0) no description available & (at5g26670 : 619.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 601.0) no description available & (reliability: 1238.0) & (original description: Putative PAE10, Description = Pectin acetylesterase 10, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00016300ctg002_6149-13525' '(gnl|cdd|66926 : 370.0) no description available & (gnl|cdd|39488 : 350.0) no description available & (at4g19420 : 344.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00018253ctg011_7846-13561' '(gnl|cdd|66926 : 335.0) no description available & (gnl|cdd|39488 : 327.0) no description available & (at4g19410 : 309.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 618.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00025713ctg003_1448-4234' '(gnl|cdd|66926 : 170.0) no description available & (gnl|cdd|39488 : 167.0) no description available & (at5g45280 : 164.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00044705ctg008_4049-8309' '(gnl|cdd|66926 : 453.0) no description available & (gnl|cdd|39488 : 439.0) no description available & (at4g19420 : 404.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00049_368396-372656' '(gnl|cdd|66926 : 382.0) no description available & (gnl|cdd|39488 : 367.0) no description available & (at4g19420 : 339.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative PAE7, Description = Pectin acetylesterase 7, PFAM = PF03283;PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00049_368728-371753' '(gnl|cdd|66926 : 122.0) no description available & (gnl|cdd|39488 : 119.0) no description available & (at5g45280 : 110.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00158_584392-592712' '(gnl|cdd|66926 : 354.0) no description available & (gnl|cdd|39488 : 346.0) no description available & (at4g19410 : 323.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 646.0) & (original description: Putative Os01g0892500, Description = Os01g0892500 protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00158_587816-591788' '(gnl|cdd|66926 : 227.0) no description available & (gnl|cdd|39488 : 221.0) no description available & (at4g19410 : 219.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 438.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00672_297808-302493' '(gnl|cdd|39488 : 611.0) no description available & (at5g26670 : 595.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 584.0) no description available & (reliability: 1190.0) & (original description: Putative At3g05910, Description = Pectinacetylesterase family protein, PFAM = PF03283;PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01274_84650-90002' '(gnl|cdd|66926 : 424.0) no description available & (gnl|cdd|39488 : 407.0) no description available & (at4g19420 : 395.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01585_261079-312137' '(at4g19420 : 511.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 499.0) no description available & (gnl|cdd|39488 : 497.0) no description available & (reliability: 1022.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01585_294981-303572' '(at4g19400 : 187.0) Profilin family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: actin cytoskeleton; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02110_109127-111027' '(gnl|cdd|66926 : 143.0) no description available & (gnl|cdd|39488 : 142.0) no description available & (at4g19420 : 134.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative In23, Description = Pectin acetylesterase, family CE13, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02435_238235-244875' '(gnl|cdd|66926 : 265.0) no description available & (gnl|cdd|39488 : 250.0) no description available & (at4g19420 : 248.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02486_553528-560485' '(gnl|cdd|39488 : 623.0) no description available & (at3g05910 : 615.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1). & (gnl|cdd|66926 : 592.0) no description available & (reliability: 1230.0) & (original description: Putative PAE12, Description = Pectin acetylesterase 12, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02714_803616-810044' '(gnl|cdd|39488 : 635.0) no description available & (at5g26670 : 614.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 600.0) no description available & (reliability: 1228.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02760_199640-241092' '(gnl|cdd|66926 : 168.0) no description available & (gnl|cdd|39488 : 163.0) no description available & (at4g19420 : 158.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283;PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf03392_1111065-1115925' '(gnl|cdd|66926 : 371.0) no description available & (gnl|cdd|39488 : 356.0) no description available & (at4g19410 : 321.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 642.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf04270_46494-60000' '(at5g23870 : 574.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39488 : 535.0) no description available & (gnl|cdd|66926 : 476.0) no description available & (reliability: 1148.0) & (original description: Putative PAE9, Description = Pectin acetylesterase 9, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf05468_393320-395742' '(gnl|cdd|66926 : 95.5) no description available & (gnl|cdd|39488 : 92.7) no description available & (at4g19410 : 88.6) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400004527, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf05649_2414-7353' '(gnl|cdd|66926 : 367.0) no description available & (gnl|cdd|39488 : 351.0) no description available & (at4g19410 : 320.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 640.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07054_35621-41345' '(gnl|cdd|66926 : 563.0) no description available & (gnl|cdd|39488 : 557.0) no description available & (at4g19420 : 555.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_393422-397764' '(gnl|cdd|66926 : 451.0) no description available & (gnl|cdd|39488 : 445.0) no description available & (at4g19420 : 438.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 876.0) & (original description: Putative PAE11, Description = Pectin acetylesterase 11, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_393461-397473' '(gnl|cdd|66926 : 447.0) no description available & (gnl|cdd|39488 : 422.0) no description available & (at4g19420 : 416.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_459771-467058' '(gnl|cdd|66926 : 399.0) no description available & (gnl|cdd|39488 : 380.0) no description available & (at4g19420 : 343.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07405_585776-594695' '(at3g09410 : 530.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 546 Blast hits to 540 proteins in 92 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|39488 : 523.0) no description available & (gnl|cdd|66926 : 494.0) no description available & (reliability: 1060.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf08273_439378-446360' '(gnl|cdd|66926 : 346.0) no description available & (gnl|cdd|39488 : 338.0) no description available & (at4g19410 : 317.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 634.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf08565_21767-27336' '(at4g19420 : 604.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 578.0) no description available & (gnl|cdd|39488 : 566.0) no description available & (reliability: 1208.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_574070-624383' '(gnl|cdd|66926 : 243.0) no description available & (gnl|cdd|39488 : 228.0) no description available & (at4g19420 : 224.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_619703-631407' '(gnl|cdd|66926 : 208.0) no description available & (gnl|cdd|39488 : 199.0) no description available & (at5g45280 : 191.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_840169-847958' '(at4g19410 : 147.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 294.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10441_135769-141804' '(gnl|cdd|66926 : 390.0) no description available & (gnl|cdd|39488 : 376.0) no description available & (at4g19420 : 363.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative PAE2, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf12852_65389-73738' '(gnl|cdd|39488 : 627.0) no description available & (at3g05910 : 618.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1). & (gnl|cdd|66926 : 595.0) no description available & (reliability: 1236.0) & (original description: Putative BnaC09g15790D, Description = BnaC09g15790D protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf13545_30926-33994' '(at4g19420 : 200.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39488 : 193.0) no description available & (gnl|cdd|66926 : 189.0) no description available & (reliability: 400.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf16716_53112-57481' '(gnl|cdd|66926 : 425.0) no description available & (gnl|cdd|39488 : 418.0) no description available & (at4g19420 : 393.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T
'10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf28761_10058-15233' '(at4g19420 : 550.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 539.0) no description available & (gnl|cdd|39488 : 533.0) no description available & (reliability: 1100.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold5504_37589-40176' '(gnl|cdd|85238 : 205.0) no description available & (at5g27870 : 169.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43062|pme_prupe : 147.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 316.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold6755_51525-56935' '(at5g09760 : 615.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 399.0) no description available & (o04887|pme2_citsi : 296.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1200.0) & (original description: Putative PGSC0003DMG400028674, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 564.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.5scaffold716_393908-403591' '(at3g60730 : 570.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 487.0) no description available & (o04887|pme2_citsi : 420.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1140.0) & (original description: Putative PME36, Description = Probable pectinesterase/pectinesterase inhibitor 36, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 920.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 548.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 878.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005957ctg005_11667-15683' '(at4g02300 : 518.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 517.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1036.0) & (original description: Putative PME39, Description = Probable pectinesterase/pectinesterase inhibitor 39, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00009648ctg000_1545-4769' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g43270 : 287.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 44 (TAIR:AT4G33220.1); Has 2924 Blast hits to 2864 proteins in 331 species: Archae - 6; Bacteria - 617; Metazoa - 1; Fungi - 199; Plants - 2076; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00148_184590-189814' '(at5g51490 : 580.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51500.1); Has 2839 Blast hits to 2789 proteins in 323 species: Archae - 6; Bacteria - 583; Metazoa - 1; Fungi - 196; Plants - 2021; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (o04887|pme2_citsi : 485.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 435.0) no description available & (reliability: 1160.0) & (original description: Putative PME59, Description = Probable pectinesterase/pectinesterase inhibitor 59, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00446_654508-660350' '(at5g09760 : 668.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 402.0) no description available & (o04887|pme2_citsi : 283.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1258.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 572.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf01623_205927-213512' '(at4g02320 : 533.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 512.0) no description available & (p83948|pme3_citsi : 508.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1066.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02125_206173-209289' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 291.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g05620 : 290.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PGSC0003DMG400019198, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02864_1180961-1190325' '(gnl|cdd|85238 : 407.0) no description available & (at2g26440 : 310.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 306.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 600.0) & (original description: Putative pme5, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02930_22790-29378' '(at3g10720 : 649.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q43062|pme_prupe : 394.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1280.0) & (original description: Putative PME25, Description = Probable pectinesterase/pectinesterase inhibitor 25, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf03203_779804-784505' '(at5g09760 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 398.0) no description available & (o04887|pme2_citsi : 316.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1188.0) & (original description: Putative PGSC0003DMG400031349, Description = Pectinesterase, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf03706_180131-191172' '(gnl|cdd|85238 : 534.0) no description available & (at4g02320 : 531.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p83948|pme3_citsi : 522.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1062.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf04217_422446-427257' '(at3g47400 : 570.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: hypocotyl, flower, root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 3318 Blast hits to 3103 proteins in 411 species: Archae - 8; Bacteria - 807; Metazoa - 11; Fungi - 237; Plants - 1968; Viruses - 75; Other Eukaryotes - 212 (source: NCBI BLink). & (o04887|pme2_citsi : 519.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 459.0) no description available & (reliability: 1140.0) & (original description: Putative PME33, Description = Probable pectinesterase/pectinesterase inhibitor 33, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf04703_599470-604884' '(at3g60730 : 577.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (o04887|pme2_citsi : 426.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1154.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05030_322257-328455' '(at5g51490 : 587.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51500.1); Has 2839 Blast hits to 2789 proteins in 323 species: Archae - 6; Bacteria - 583; Metazoa - 1; Fungi - 196; Plants - 2021; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (o04887|pme2_citsi : 499.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 435.0) no description available & (reliability: 1174.0) & (original description: Putative PME59, Description = Probable pectinesterase/pectinesterase inhibitor 59, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05030_361962-366521' '(o04887|pme2_citsi : 664.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at2g45220 : 650.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85238 : 506.0) no description available & (reliability: 1300.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05407_128409-136394' '(at5g48450 : 800.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 572.0) no description available & (q00624|aso_brana : 457.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 151.0) no description available & (reliability: 1600.0) & (original description: Putative sks3, Description = Protein SKU5-like 3, PFAM = PF07731;PF07732;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf08723_116967-120622' '(gnl|cdd|85238 : 314.0) no description available & (at4g02300 : 266.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 238.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 532.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf09345_6918-10428' '(gnl|cdd|85238 : 317.0) no description available & (at4g02320 : 269.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (o04887|pme2_citsi : 244.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 538.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf09665_206362-211502' '(o04887|pme2_citsi : 697.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at2g45220 : 662.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85238 : 518.0) no description available & (reliability: 1324.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf11289_56932-60012' '(gnl|cdd|85238 : 355.0) no description available & (q43062|pme_prupe : 286.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at2g26440 : 277.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf11361_350040-354768' '(at3g60730 : 578.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 489.0) no description available & (o04887|pme2_citsi : 428.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1156.0) & (original description: Putative PME36, Description = Probable pectinesterase/pectinesterase inhibitor 36, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf15657_266133-272829' '(at5g48450 : 806.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 569.0) no description available & (q00624|aso_brana : 479.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1612.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394;PF07732)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 780.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 608.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf18704_124081-130851' '(at4g02320 : 521.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 510.0) no description available & (p83948|pme3_citsi : 507.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1042.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T
'10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf21138_147191-152169' '(at5g09760 : 714.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 414.0) no description available & (p83948|pme3_citsi : 298.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1288.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T
'11' 'lipid metabolism' 'niben101scf01269_1688859-1694774' '(at3g20480 : 360.0) tetraacyldisaccharide 4'-kinase family protein; FUNCTIONS IN: tetraacyldisaccharide 4'-kinase activity, ATP binding; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetraacyldisaccharide 4'-kinase (InterPro:IPR003758). & (gnl|cdd|31849 : 148.0) no description available & (reliability: 720.0) & (original description: Putative LPXK, Description = Probable tetraacyldisaccharide 4'-kinase, mitochondrial, PFAM = PF02606)' T
'11.1' 'lipid metabolism.FA synthesis and FA elongation' '' ''
'11.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation' 'niben101scf04292_142918-151061' '(at3g56130 : 197.0) biotin/lipoyl attachment domain-containing protein; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2). & (reliability: 394.0) & (original description: Putative At3g15690, Description = Biotin/lipoyl attachment domain-containing protein, PFAM = PF00364)' T
'11.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation' 'niben101scf10152_298472-308639' '(at3g56130 : 188.0) biotin/lipoyl attachment domain-containing protein; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2). & (reliability: 376.0) & (original description: Putative At3g56130, Description = AT3g56130/F18O21_90, PFAM = PF00364)' T
'11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'nbv0.5scaffold63_1247697-1263333' '(at1g36160 : 3751.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2918.0) no description available & (gnl|cdd|87496 : 803.0) no description available & (q2qmg2|mcca_orysa : 214.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7502.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02786;PF00364;PF02785;PF01039;PF08326;PF00289)' T
'11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf00960_1540317-1557025' '(at1g36160 : 3631.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2896.0) no description available & (gnl|cdd|87496 : 770.0) no description available & (q2qmg2|mcca_orysa : 209.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7262.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02785;PF08326;PF00289;PF02786;PF00364;PF01039)' T
'11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf05269_463399-479933' '(at1g36160 : 3695.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2920.0) no description available & (gnl|cdd|87496 : 802.0) no description available & (q2qmg2|mcca_orysa : 212.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7390.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF08326;PF01039;PF00364;PF02785;PF00289;PF02786)' T
'11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf06375_650799-668997' '(at1g36160 : 3712.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2915.0) no description available & (gnl|cdd|87496 : 796.0) no description available & (q2qmg2|mcca_orysa : 214.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7424.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02785;PF00364;PF00289;PF08326;PF01039;PF02786)' T
'11.1.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex' '' ''
'11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf01968_217550-223823' '(at2g38040 : 582.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 421.0) no description available & (reliability: 1164.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T
'11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf09123_70062-77009' '(at2g38040 : 799.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 437.0) no description available & (reliability: 1598.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T
'11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf09584_108695-115105' '(at2g38040 : 587.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 422.0) no description available & (reliability: 1174.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T
'11.1.1.2.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.beta Carboxyltransferase' 'niben044scf00021620ctg011_3410-5852' '(p12219|accd_tobac : 246.0) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) - Nicotiana tabacum (Common tobacco) & (atcg00500 : 94.0) Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.; acetyl-CoA carboxylase carboxyl transferase subunit beta (ACCD); FUNCTIONS IN: protein binding, acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, acetate CoA-transferase complex, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-CoA carboxylase carboxyl transferase, beta subunit (InterPro:IPR000438). & (reliability: 188.0) & (original description: Putative accD, Description = Acetyl-CoA carboxylase, PFAM = )' T
'11.1.1.2.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.beta Carboxyltransferase' 'niben101scf11178_173428-176343' '(p12219|accd_tobac : 956.0) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) - Nicotiana tabacum (Common tobacco) & (atcg00500 : 592.0) Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.; acetyl-CoA carboxylase carboxyl transferase subunit beta (ACCD); FUNCTIONS IN: protein binding, acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, acetate CoA-transferase complex, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-CoA carboxylase carboxyl transferase, beta subunit (InterPro:IPR000438). & (gnl|cdd|81680 : 376.0) no description available & (gnl|cdd|35760 : 325.0) no description available & (reliability: 1184.0) & (original description: Putative accD, Description = Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic, PFAM = PF01039)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.3scaffold9179_2848-10452' '(at5g16390 : 148.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 143.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (gnl|cdd|81929 : 143.0) no description available & (reliability: 296.0) & (original description: Putative BCCP2, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.3scaffold14617_34154-39678' '(gnl|cdd|81929 : 144.0) no description available & (at5g16390 : 139.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 131.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 278.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.5scaffold265_207869-215304' '(at3g15690 : 223.0) Single hybrid motif superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G52670.1); Has 3111 Blast hits to 3110 proteins in 1263 species: Archae - 10; Bacteria - 2402; Metazoa - 8; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At3g15690, Description = Putative acetyl-CoA carboxylase biotin-containing subunit, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben044scf00007414ctg003_6641-14393' '(at5g16390 : 146.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81929 : 146.0) no description available & (q42783|bccp_soybn : 139.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 292.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben044scf00015644ctg028_8033-14409' '(at1g52670 : 187.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At3g15690, Description = Putative acetyl-CoA carboxylase biotin-containing subunit, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf00653_179567-187240' '(at5g16390 : 160.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 156.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (gnl|cdd|81929 : 140.0) no description available & (reliability: 320.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf04375_780202-802345' '(gnl|cdd|81929 : 130.0) no description available & (at5g16390 : 129.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 118.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 258.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf07382_82111-99073' '(at1g52670 : 226.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At1g52670, Description = Single hybrid motif superfamily protein, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf10532_35723-41568' '(gnl|cdd|81929 : 142.0) no description available & (at5g16390 : 141.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 130.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 282.0) & (original description: Putative accB, Description = Acetyl-CoA carboxylase, biotin carboxyl carrier protein, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf12165_24403-29056' '(gnl|cdd|81929 : 144.0) no description available & (at5g15530 : 139.0) biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,; biotin carboxyl carrier protein 2 (BCCP2); FUNCTIONS IN: biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: chloroplastic acetylcoenzyme A carboxylase 1 (TAIR:AT5G16390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42783|bccp_soybn : 125.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 278.0) & (original description: Putative BCCP2, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic, PFAM = PF00364)' T
'11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf12266_232689-242617' '(at1g52670 : 191.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative F383_25561, Description = Pyruvate carboxylase subunit b, PFAM = PF00364)' T
'11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'niben101scf04077_351942-375148' '(at5g35360 : 909.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (gnl|cdd|82696 : 751.0) no description available & (gnl|cdd|35459 : 717.0) no description available & (q2qmg2|mcca_orysa : 426.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1818.0) & (original description: Putative accC, Description = Acetyl-CoA carboxylase, biotin carboxylase, PFAM = PF00289;PF02785;PF02786)' T
'11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'niben101scf06829_235026-251914' '(at5g35360 : 905.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (gnl|cdd|82696 : 750.0) no description available & (gnl|cdd|35459 : 715.0) no description available & (q2qmg2|mcca_orysa : 428.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1810.0) & (original description: Putative accC, Description = Acetyl-CoA carboxylase, biotin carboxylase, PFAM = PF00289;PF02786;PF02785)' T
'11.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Transacylase' 'niben101scf02357_875685-882441' '(at2g30200 : 510.0) catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding; FUNCTIONS IN: binding, transferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Acyl transferase domain (InterPro:IPR001227), Acyl transferase (InterPro:IPR014043), Malonyl-CoA ACP transacylase, ACP-binding (InterPro:IPR016036); Has 15695 Blast hits to 14359 proteins in 2779 species: Archae - 4; Bacteria - 11793; Metazoa - 195; Fungi - 1104; Plants - 63; Viruses - 0; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|38137 : 369.0) no description available & (gnl|cdd|30679 : 287.0) no description available & (reliability: 1020.0) & (original description: Putative fabD, Description = Malonyl CoA-acyl carrier protein transacylase, PFAM = PF00698)' T
'11.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Transacylase' 'niben101scf05467_200643-207154' '(at2g30200 : 511.0) catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding; FUNCTIONS IN: binding, transferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Acyl transferase domain (InterPro:IPR001227), Acyl transferase (InterPro:IPR014043), Malonyl-CoA ACP transacylase, ACP-binding (InterPro:IPR016036); Has 15695 Blast hits to 14359 proteins in 2779 species: Archae - 4; Bacteria - 11793; Metazoa - 195; Fungi - 1104; Plants - 63; Viruses - 0; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|38137 : 374.0) no description available & (gnl|cdd|30679 : 288.0) no description available & (reliability: 1022.0) & (original description: Putative fabD, Description = Malonyl-CoA:ACP transacylase, PFAM = PF00698)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'nbv0.3scaffold25470_24033-28550' '(at2g04540 : 392.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36608 : 304.0) no description available & (gnl|cdd|82192 : 297.0) no description available & (p23902|kasc1_horvu : 130.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 784.0) & (original description: Putative fabF, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 2, PFAM = PF00109)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00000760ctg001_81-15152' '(q07510|fabh_spiol : 548.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (at1g62640 : 546.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82946 : 427.0) no description available & (reliability: 1092.0) & (original description: Putative KAS3A, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic, PFAM = PF08541;PF08545)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00033926ctg003_2777-9287' '(at1g74960 : 674.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 597.0) no description available & (gnl|cdd|29421 : 517.0) no description available & (p23902|kasc1_horvu : 408.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1348.0) & (original description: Putative KAS2, Description = 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00037550ctg002_1-21681' '(at5g46290 : 758.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 701.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 589.0) no description available & (gnl|cdd|81931 : 519.0) no description available & (reliability: 1516.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF02801;PF00109)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf00811_1031804-1042175' '(at2g04540 : 648.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36608 : 554.0) no description available & (gnl|cdd|82192 : 541.0) no description available & (p23902|kasc1_horvu : 253.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1296.0) & (original description: Putative KAS, Description = 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf02437_647368-655084' '(at1g74960 : 684.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 594.0) no description available & (gnl|cdd|29421 : 516.0) no description available & (p23902|kasc1_horvu : 426.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1368.0) & (original description: Putative KAS2, Description = 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf02972_360270-367333' '(at5g46290 : 642.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 627.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 550.0) no description available & (gnl|cdd|29421 : 513.0) no description available & (reliability: 1284.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf03330_19816-30151' '(at1g74960 : 700.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 593.0) no description available & (gnl|cdd|29421 : 515.0) no description available & (p23902|kasc1_horvu : 412.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1400.0) & (original description: Putative fabF, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 2, PFAM = PF02801;PF00109)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf07728_305916-312267' '(at5g46290 : 792.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 706.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 589.0) no description available & (gnl|cdd|81931 : 521.0) no description available & (reliability: 1584.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf07826_339411-355558' '(at5g46290 : 771.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 717.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 590.0) no description available & (gnl|cdd|81931 : 528.0) no description available & (reliability: 1542.0) & (original description: Putative KAS12, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf08936_787262-801738' '(at1g62640 : 579.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07510|fabh_spiol : 572.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (gnl|cdd|82946 : 424.0) no description available & (reliability: 1158.0) & (original description: Putative KAS3A, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic, PFAM = PF08541;PF08545)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf10810_97006-107202' '(at1g74960 : 702.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 594.0) no description available & (gnl|cdd|29421 : 512.0) no description available & (p23902|kasc1_horvu : 418.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1404.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF02801;PF00109)' T
'11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf12889_24331-53638' '(at1g62640 : 513.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07510|fabh_spiol : 489.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (gnl|cdd|82946 : 400.0) no description available & (reliability: 1026.0) & (original description: Putative KAS, Description = Beta-keto-ACP synthase, PFAM = PF08545;PF08541)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.3scaffold28291_10993-21919' '(q93x67|fabg2_brana : 308.0) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) - Brassica napus (Rape) & (at1g24360 : 293.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 277.0) no description available & (gnl|cdd|36414 : 248.0) no description available & (reliability: 586.0) & (original description: Putative bkr4, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 4, PFAM = PF00106)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.5scaffold45_1205146-1210755' '(q93x62|fabg1_brana : 155.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 149.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|76850 : 97.4) no description available & (gnl|cdd|36414 : 93.9) no description available & (reliability: 298.0) & (original description: Putative bkr2, Description = 3-oxoacyl-(Acyl-carrier-protein) reductase, PFAM = PF00106)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.5scaffold45_1205194-1236842' '(q93x62|fabg1_brana : 307.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 294.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 268.0) no description available & (gnl|cdd|36414 : 237.0) no description available & (reliability: 588.0) & (original description: Putative gbkr1, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic, PFAM = PF13561;PF13561)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben044scf00007070ctg006_19659-32090' '(q93x62|fabg1_brana : 371.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 356.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 320.0) no description available & (gnl|cdd|36414 : 293.0) no description available & (reliability: 712.0) & (original description: Putative CLKR27, Description = 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic, PFAM = PF13561)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben101scf05634_327123-331932' '(q93x62|fabg1_brana : 155.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 149.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|76850 : 97.4) no description available & (gnl|cdd|36414 : 92.4) no description available & (reliability: 298.0) & (original description: Putative bkr2, Description = 3-oxoacyl-(Acyl-carrier-protein) reductase, PFAM = PF00106)' T
'11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben101scf18951_113316-120969' '(q93x62|fabg1_brana : 365.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 340.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 308.0) no description available & (gnl|cdd|36414 : 292.0) no description available & (reliability: 680.0) & (original description: Putative gbkr1, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic, PFAM = PF13561)' T
'11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf00279_701309-710701' '(at5g10160 : 309.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 202.0) no description available & (reliability: 618.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T
'11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf02335_456138-463556' '(at5g10160 : 309.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 203.0) no description available & (reliability: 618.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T
'11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf02513_751562-757522' '(at5g10160 : 300.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 203.0) no description available & (reliability: 600.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T
'11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf08566_865920-872127' '(at2g22230 : 167.0) Thioesterase superfamily protein; FUNCTIONS IN: crotonoyl-[acyl-carrier-protein] hydratase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: defense response to fungus, incompatible interaction, fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G10160.1); Has 7405 Blast hits to 7398 proteins in 2208 species: Archae - 0; Bacteria - 5424; Metazoa - 2; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|80441 : 137.0) no description available & (reliability: 334.0) & (original description: Putative fabZ, Description = (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase, PFAM = PF07977)' T
'11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben044scf00004941ctg020_716-6136' '(p80030|fabi_brana : 467.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 462.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (gnl|cdd|75497 : 432.0) no description available & (gnl|cdd|35944 : 87.8) no description available & (reliability: 924.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T
'11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf00340_347538-352599' '(at2g05990 : 513.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 504.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 430.0) no description available & (gnl|cdd|35944 : 90.9) no description available & (reliability: 1026.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T
'11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf02344_140031-144539' '(at2g05990 : 502.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 489.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 431.0) no description available & (gnl|cdd|35944 : 97.4) no description available & (reliability: 1004.0) & (original description: Putative fabI, Description = Enoyl-ACP reductase, PFAM = PF13561)' T
'11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf06661_429690-435643' '(p80030|fabi_brana : 469.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 467.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (gnl|cdd|75497 : 436.0) no description available & (gnl|cdd|35944 : 90.5) no description available & (reliability: 934.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T
'11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf09417_60746-65495' '(at2g05990 : 498.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 483.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 430.0) no description available & (gnl|cdd|35944 : 93.2) no description available & (reliability: 996.0) & (original description: Putative MOD1, Description = Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic, PFAM = PF13561)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'nbv0.3scaffold14554_17707-23460' '(q9sqi3|fatb_goshi : 545.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (at1g08510 : 542.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|85587 : 345.0) no description available & (reliability: 1084.0) & (original description: Putative fatB, Description = Fatty acyl-ACP thioesterase B, PFAM = PF01643;PF12590)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf04024_129073-134012' '(at1g08510 : 286.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 284.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 262.0) no description available & (reliability: 572.0) & (original description: Putative fatA, Description = Acyl-ACP thioesterase, PFAM = PF01643)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf04915_36957-45720' '(at3g25110 : 479.0) Encodes a FatA acyl-ACP thioesterase; fatA acyl-ACP thioesterase (FaTA); CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: Acyl-ACP thioesterase (TAIR:AT4G13050.1); Has 1414 Blast hits to 1414 proteins in 571 species: Archae - 0; Bacteria - 1089; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|85587 : 329.0) no description available & (q9sqi3|fatb_goshi : 233.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (reliability: 958.0) & (original description: Putative FATA, Description = Oleoyl-acyl carrier protein thioesterase, chloroplastic, PFAM = PF01643)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf08341_399165-404477' '(at1g08510 : 546.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 544.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 342.0) no description available & (reliability: 1092.0) & (original description: Putative fatB, Description = Fatty acyl-ACP thioesterase B, PFAM = PF12590;PF01643)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf08799_34506-41344' '(at3g25110 : 473.0) Encodes a FatA acyl-ACP thioesterase; fatA acyl-ACP thioesterase (FaTA); CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: Acyl-ACP thioesterase (TAIR:AT4G13050.1); Has 1414 Blast hits to 1414 proteins in 571 species: Archae - 0; Bacteria - 1089; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|85587 : 323.0) no description available & (q9sqi3|fatb_goshi : 241.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (reliability: 946.0) & (original description: Putative FATA2, Description = Oleoyl-acyl carrier protein thioesterase 2, chloroplastic, PFAM = PF01643)' T
'11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf10950_15490-19903' '(at1g08510 : 327.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 320.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 268.0) no description available & (reliability: 654.0) & (original description: Putative FATA1, Description = Acyl-ACP thioesterase, PFAM = PF01643)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.3scaffold1268_2316-34901' '(at5g35930 : 985.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, catalytic activity, AMP binding, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Pyrrolo-quinoline quinone beta-propeller repeat (InterPro:IPR018391), Pyrrolo-quinoline quinone repeat (InterPro:IPR002372), AMP-dependent synthetase/ligase (InterPro:IPR000873), Phosphopantetheine attachment site (InterPro:IPR006162), Acyl carrier protein-like (InterPro:IPR009081), AMP-binding, conserved site (InterPro:IPR020845), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39848 : 339.0) no description available & (gnl|cdd|84817 : 251.0) no description available & (reliability: 1970.0) & (original description: Putative At5g35930, Description = Putative acyl-activating enzyme 19, PFAM = PF13360;PF13360;PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.3scaffold37668_1-4983' '(at5g36880 : 282.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|36390 : 187.0) no description available & (gnl|cdd|81141 : 160.0) no description available & (reliability: 564.0) & (original description: Putative acss2l, Description = LOC568763 protein, PFAM = PF00501;PF16177)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold1965_358774-368102' '(at3g16170 : 541.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 290.0) no description available & (gnl|cdd|36391 : 246.0) no description available & (q42982|4cl2_orysa : 101.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative fcs, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold3033_232506-235129' '(at1g55320 : 249.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 150.0) no description available & (gnl|cdd|30714 : 87.7) no description available & (reliability: 498.0) & (original description: Putative AAE17, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold3033_235130-240616' '(at1g55320 : 479.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 229.0) no description available & (gnl|cdd|30714 : 119.0) no description available & (reliability: 958.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00009193ctg005_23536-25764' '(at3g16910 : 471.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 426.0) no description available & (gnl|cdd|36391 : 273.0) no description available & (q42982|4cl2_orysa : 89.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00012536ctg009_1-6367' '(at3g16170 : 439.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 263.0) no description available & (gnl|cdd|36391 : 192.0) no description available & (q42982|4cl2_orysa : 85.1) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 878.0) & (original description: Putative acsf3, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00012601ctg001_3878-12798' '(at5g23050 : 622.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 377.0) no description available & (gnl|cdd|30714 : 233.0) no description available & (reliability: 1244.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00015761ctg003_310-11740' '(at1g21540 : 721.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 676.0) no description available & (gnl|cdd|36391 : 528.0) no description available & (o24145|4cl1_tobac : 179.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1442.0) & (original description: Putative AEE10, Description = Probable acyl-activating enzyme 10, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00022436ctg006_8150-21157' '(at3g23790 : 871.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 466.0) no description available & (gnl|cdd|31225 : 443.0) no description available & (q42982|4cl2_orysa : 85.9) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1742.0) & (original description: Putative AAE16, Description = Probable acyl-activating enzyme 16, chloroplastic, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00022436ctg007_150-3643' '(at3g23790 : 90.1) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative AAE15, Description = Long-chain-fatty-acid CoA ligase, putative, PFAM = )' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00050152ctg011_1-4383' '(at2g17650 : 783.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 765.0) no description available & (gnl|cdd|36391 : 507.0) no description available & (o24145|4cl1_tobac : 142.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1566.0) & (original description: Putative AAE2, Description = Probable acyl-activating enzyme 2, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00094_379735-388916' '(at3g16910 : 902.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 774.0) no description available & (gnl|cdd|36391 : 492.0) no description available & (o24145|4cl1_tobac : 122.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1804.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00150_277702-294682' '(at1g55320 : 1014.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 494.0) no description available & (gnl|cdd|30714 : 267.0) no description available & (reliability: 2028.0) & (original description: Putative AAE18, Description = Probable acyl-activating enzyme 18, peroxisomal, PFAM = PF16177;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00595_964922-970690' '(at3g48990 : 786.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 438.0) no description available & (gnl|cdd|30666 : 407.0) no description available & (o24145|4cl1_tobac : 172.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1572.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02009_34571-70783' '(at1g21540 : 698.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 659.0) no description available & (gnl|cdd|36391 : 515.0) no description available & (o24145|4cl1_tobac : 187.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1396.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02009_58551-70786' '(at1g21540 : 698.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 659.0) no description available & (gnl|cdd|36391 : 515.0) no description available & (o24145|4cl1_tobac : 187.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1396.0) & (original description: Putative AEE9, Description = Probable acyl-activating enzyme 9, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02041_105028-110184' '(at2g17650 : 796.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 760.0) no description available & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 143.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1592.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02072_269531-272904' '(at1g55320 : 171.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 126.0) no description available & (gnl|cdd|30714 : 91.1) no description available & (reliability: 342.0) & (original description: Putative AAE17, Description = Acetyl-coenzyme A synthetase, PFAM = )' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02572_1162-12373' '(at3g16170 : 730.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 373.0) no description available & (gnl|cdd|36391 : 333.0) no description available & (o24145|4cl1_tobac : 125.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1460.0) & (original description: Putative ACSF3, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03565_43918-49206' '(at3g48990 : 750.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 445.0) no description available & (gnl|cdd|30666 : 415.0) no description available & (o24145|4cl1_tobac : 165.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1500.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03888_95301-97772' '(at3g23790 : 176.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 104.0) no description available & (gnl|cdd|31225 : 88.1) no description available & (reliability: 352.0) & (original description: Putative AAE15, Description = Long-chain-fatty-acid CoA ligase (AMP-forming), PFAM = )' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03979_156010-180655' '(at5g36880 : 1150.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 859.0) no description available & (gnl|cdd|36390 : 803.0) no description available & (o24145|4cl1_tobac : 88.6) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2300.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03979_157234-180631' '(at5g36880 : 950.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 677.0) no description available & (gnl|cdd|36390 : 641.0) no description available & (reliability: 1900.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf04020_67046-71181' '(gnl|cdd|82505 : 738.0) no description available & (at1g65880 : 672.0) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.; benzoyloxyglucosinolate 1 (BZO1); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 76758 Blast hits to 70084 proteins in 3572 species: Archae - 1128; Bacteria - 49908; Metazoa - 3256; Fungi - 3775; Plants - 2105; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink). & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 137.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1338.0) & (original description: Putative AAE20, Description = Benzoate--CoA ligase, peroxisomal, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf04020_275533-279903' '(gnl|cdd|82505 : 734.0) no description available & (at1g66120 : 662.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 78414 Blast hits to 71735 proteins in 3650 species: Archae - 1135; Bacteria - 51527; Metazoa - 3303; Fungi - 3365; Plants - 2332; Viruses - 1; Other Eukaryotes - 16751 (source: NCBI BLink). & (gnl|cdd|36391 : 516.0) no description available & (q42982|4cl2_orysa : 143.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative AAE, Description = Acyl-activating enzyme-like protein, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf05827_178462-193832' '(at5g23050 : 889.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 423.0) no description available & (gnl|cdd|30714 : 237.0) no description available & (reliability: 1778.0) & (original description: Putative AAE17, Description = Probable acyl-activating enzyme 17, peroxisomal, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf05910_13901-17553' '(at5g16340 : 758.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 5 (TAIR:AT5G16370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82505 : 699.0) no description available & (gnl|cdd|36391 : 543.0) no description available & (q42982|4cl2_orysa : 172.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1516.0) & (original description: Putative AAE6, Description = Probable acyl-activating enzyme 6, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf07601_85090-112948' '(at5g36880 : 1220.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 842.0) no description available & (gnl|cdd|36390 : 797.0) no description available & (reliability: 2440.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF13193;PF16177;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf08415_41803-48219' '(at3g48990 : 786.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 445.0) no description available & (gnl|cdd|30666 : 414.0) no description available & (o24145|4cl1_tobac : 175.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1572.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf08575_283695-287347' '(at5g16370 : 655.0) acyl activating enzyme 5 (AAE5); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G16340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82505 : 647.0) no description available & (gnl|cdd|36391 : 527.0) no description available & (o24145|4cl1_tobac : 128.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1310.0) & (original description: Putative AAE5, Description = Probable acyl-activating enzyme 5, peroxisomal, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09203_169270-176966' '(at3g16910 : 886.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 794.0) no description available & (gnl|cdd|36391 : 494.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1772.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09291_82733-88313' '(at2g17650 : 804.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 757.0) no description available & (gnl|cdd|36391 : 526.0) no description available & (o24145|4cl1_tobac : 155.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1608.0) & (original description: Putative AAE2, Description = Probable acyl-activating enzyme 2, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09442_18199-26791' '(at2g17650 : 728.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 712.0) no description available & (gnl|cdd|36391 : 484.0) no description available & (o24145|4cl1_tobac : 130.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1456.0) & (original description: Putative acsB, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09442_76926-101926' '(gnl|cdd|82505 : 609.0) no description available & (at1g20560 : 538.0) acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 73688 Blast hits to 67811 proteins in 3570 species: Archae - 1118; Bacteria - 49573; Metazoa - 3114; Fungi - 3286; Plants - 2213; Viruses - 1; Other Eukaryotes - 14383 (source: NCBI BLink). & (gnl|cdd|36391 : 418.0) no description available & (o24145|4cl1_tobac : 134.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1076.0) & (original description: Putative AAE1, Description = Probable acyl-activating enzyme 1, peroxisomal, PFAM = PF00501;PF13193)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf10608_60617-80649' '(at3g23790 : 957.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 486.0) no description available & (gnl|cdd|31225 : 447.0) no description available & (o24145|4cl1_tobac : 87.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1914.0) & (original description: Putative AAE16, Description = Probable acyl-activating enzyme 16, chloroplastic, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf11341_45802-57145' '(at5g23050 : 873.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 458.0) no description available & (gnl|cdd|30714 : 264.0) no description available & (reliability: 1746.0) & (original description: Putative AAE17, Description = Probable acyl-activating enzyme 17, peroxisomal, PFAM = PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf12935_140840-147963' '(at1g20560 : 829.0) acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 73688 Blast hits to 67811 proteins in 3570 species: Archae - 1118; Bacteria - 49573; Metazoa - 3114; Fungi - 3286; Plants - 2213; Viruses - 1; Other Eukaryotes - 14383 (source: NCBI BLink). & (gnl|cdd|82505 : 779.0) no description available & (gnl|cdd|36391 : 528.0) no description available & (o24145|4cl1_tobac : 143.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1658.0) & (original description: Putative AAE1, Description = Probable acyl-activating enzyme 1, peroxisomal, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf13411_214811-219150' '(gnl|cdd|82505 : 748.0) no description available & (at2g17650 : 722.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|36391 : 505.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1444.0) & (original description: Putative 4CL, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T
'11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf39201_2005-11520' '(at3g16170 : 739.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|30666 : 363.0) no description available & (gnl|cdd|36391 : 317.0) no description available & (o24145|4cl1_tobac : 125.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1478.0) & (original description: Putative AAE13, Description = Malonate--CoA ligase, PFAM = PF00501;PF13193)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'nbv0.3scaffold6366_18904-28511' '(at1g77590 : 1100.0) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.; long chain acyl-CoA synthetase 9 (LACS9); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G04350.2); Has 68698 Blast hits to 57242 proteins in 3549 species: Archae - 1129; Bacteria - 47028; Metazoa - 2860; Fungi - 3365; Plants - 2152; Viruses - 2; Other Eukaryotes - 12162 (source: NCBI BLink). & (gnl|cdd|36395 : 911.0) no description available & (gnl|cdd|31225 : 450.0) no description available & (reliability: 2200.0) & (original description: Putative LACS9, Description = Long chain acyl-CoA synthetase 9, chloroplastic, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'nbv0.5scaffold6508_9566-25061' '(at4g23850 : 956.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 749.0) no description available & (gnl|cdd|31225 : 438.0) no description available & (o24145|4cl1_tobac : 99.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1912.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00000522ctg006_3094-13677' '(at4g23850 : 1085.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 813.0) no description available & (gnl|cdd|31225 : 447.0) no description available & (o24145|4cl1_tobac : 96.7) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2170.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00012208ctg019_6409-15292' '(at2g04350 : 859.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 753.0) no description available & (gnl|cdd|31225 : 388.0) no description available & (reliability: 1718.0) & (original description: Putative acsl4, Description = LOC100174803 protein, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00014597ctg000_8037-17538' '(at1g49430 : 958.0) Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.; long-chain acyl-CoA synthetase 2 (LACS2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G64400.1); Has 53337 Blast hits to 50359 proteins in 3209 species: Archae - 917; Bacteria - 34261; Metazoa - 2388; Fungi - 2032; Plants - 1855; Viruses - 1; Other Eukaryotes - 11883 (source: NCBI BLink). & (gnl|cdd|36470 : 713.0) no description available & (gnl|cdd|31225 : 442.0) no description available & (o24145|4cl1_tobac : 108.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1916.0) & (original description: Putative LACS2, Description = Long chain acyl-CoA synthetase 2, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf00793_93931-101030' '(at2g47240 : 922.0) Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis; LONG-CHAIN ACYL-COA SYNTHASE 1 (LACS1); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, very long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid biosynthetic process, cutin biosynthetic process, wax biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G23850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36470 : 727.0) no description available & (gnl|cdd|31225 : 464.0) no description available & (q42982|4cl2_orysa : 91.3) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1844.0) & (original description: Putative LACS1, Description = Long chain acyl-CoA synthetase 1, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf01434_132419-147952' '(at5g27600 : 1130.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36470 : 756.0) no description available & (gnl|cdd|31225 : 480.0) no description available & (p14912|4cl1_petcr : 116.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 2260.0) & (original description: Putative LACS7, Description = Long chain acyl-CoA synthetase 7, peroxisomal, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf01434_145500-148029' '(at5g27600 : 146.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36470 : 93.4) no description available & (reliability: 292.0) & (original description: Putative LACS1, Description = Hypothetical_protein, PFAM = )' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf02790_376189-384935' '(at2g04350 : 1061.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 910.0) no description available & (gnl|cdd|31225 : 446.0) no description available & (reliability: 2122.0) & (original description: Putative LACS8, Description = Long chain acyl-CoA synthetase 8, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf02972_127950-138780' '(at4g23850 : 1048.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 815.0) no description available & (gnl|cdd|31225 : 454.0) no description available & (o24145|4cl1_tobac : 99.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2096.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf04727_796471-806384' '(at2g04350 : 1063.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 904.0) no description available & (gnl|cdd|31225 : 443.0) no description available & (reliability: 2126.0) & (original description: Putative LACS8, Description = Long chain acyl-CoA synthetase 8, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf04968_930-25623' '(at4g23850 : 585.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 425.0) no description available & (gnl|cdd|31225 : 208.0) no description available & (reliability: 1170.0) & (original description: Putative bvACS, Description = Long-Chain Acyl-CoA Synthetase, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf05534_227152-236075' '(at1g77590 : 1056.0) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.; long chain acyl-CoA synthetase 9 (LACS9); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G04350.2); Has 68698 Blast hits to 57242 proteins in 3549 species: Archae - 1129; Bacteria - 47028; Metazoa - 2860; Fungi - 3365; Plants - 2152; Viruses - 2; Other Eukaryotes - 12162 (source: NCBI BLink). & (gnl|cdd|36395 : 907.0) no description available & (gnl|cdd|31225 : 445.0) no description available & (reliability: 2112.0) & (original description: Putative LACS9, Description = Long chain acyl-CoA synthetase 9, chloroplastic, PFAM = PF00501)' T
'11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf14323_95290-110210' '(at4g23850 : 1099.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 826.0) no description available & (gnl|cdd|31225 : 457.0) no description available & (o24145|4cl1_tobac : 98.6) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2198.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'nbv0.3scaffold4733_5056-8483' '(at2g26640 : 803.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 454.0) no description available & (reliability: 1606.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 908.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben044scf00044912ctg007_1-9678' '(at1g04220 : 642.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 441.0) no description available & (reliability: 1284.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf02329_151914-155314' '(at1g07720 : 676.0) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 3 (KCS3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 12 (TAIR:AT2G28630.1); Has 2897 Blast hits to 2863 proteins in 795 species: Archae - 0; Bacteria - 1421; Metazoa - 0; Fungi - 2; Plants - 1311; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|87517 : 381.0) no description available & (reliability: 1352.0) & (original description: Putative KCS3, Description = 3-ketoacyl-CoA synthase 3, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf02339_96170-101179' '(at2g26640 : 820.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 542.0) no description available & (reliability: 1640.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf04082_46852-50926' '(at1g04220 : 640.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 438.0) no description available & (reliability: 1280.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf04944_116710-120242' '(at2g26640 : 863.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 542.0) no description available & (reliability: 1726.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf05676_698542-701939' '(at2g28630 : 685.0) Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 12 (KCS12); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 3 (TAIR:AT1G07720.1); Has 2195 Blast hits to 2173 proteins in 528 species: Archae - 0; Bacteria - 1011; Metazoa - 0; Fungi - 4; Plants - 1037; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|87517 : 396.0) no description available & (reliability: 1370.0) & (original description: Putative KCS12, Description = 3-ketoacyl-CoA synthase 12, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf06722_65212-68612' '(at1g07720 : 684.0) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 3 (KCS3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 12 (TAIR:AT2G28630.1); Has 2897 Blast hits to 2863 proteins in 795 species: Archae - 0; Bacteria - 1421; Metazoa - 0; Fungi - 2; Plants - 1311; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|87517 : 381.0) no description available & (reliability: 1368.0) & (original description: Putative KCS3, Description = 3-ketoacyl-CoA synthase 3, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf06901_124485-129521' '(at2g26640 : 794.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 527.0) no description available & (reliability: 1588.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08328_84619-87753' '(at2g26640 : 848.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 523.0) no description available & (reliability: 1696.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 860.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 884.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08470_28730-32608' '(at1g04220 : 613.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 433.0) no description available & (reliability: 1226.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08523_90041-93576' '(at2g26640 : 888.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 549.0) no description available & (reliability: 1776.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08392;PF08541)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 688.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf09024_64533-70374' '(at1g01120 : 832.0) Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.; 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 512.0) no description available & (reliability: 1664.0) & (original description: Putative KCS1, Description = 3-ketoacyl-CoA synthase 1, PFAM = PF08392;PF08541)' T
'11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 852.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf02348_69110-75723' '(at4g24510 : 287.0) Involved in C28 to C30 fatty acid elongation.; ECERIFERUM 2 (CER2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: wax biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G13840.1); Has 1252 Blast hits to 1252 proteins in 85 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 1240; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66174 : 119.0) no description available & (reliability: 574.0) & (original description: Putative CER2, Description = Protein ECERIFERUM 1, PFAM = PF02458)' T
'11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 810.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 844.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 714.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'nbv0.5scaffold220_868382-877951' '(at1g65290 : 163.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 118.0) no description available & (reliability: 326.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'nbv0.5scaffold3735_183566-189377' '(gnl|cdd|36959 : 98.4) no description available & (at1g65290 : 97.8) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben044scf00000261ctg002_1725-11184' '(at1g65290 : 181.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 134.0) no description available & (gnl|cdd|80807 : 84.1) no description available & (reliability: 362.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben044scf00048410ctg001_544-5820' '(at1g65290 : 100.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 98.4) no description available & (reliability: 200.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf03855_36528-40907' '(p08817|acp2_horvu : 121.0) Acyl carrier protein 2, chloroplast precursor (Acyl carrier protein II) (ACP II) - Hordeum vulgare (Barley) & (at5g27200 : 106.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36959 : 105.0) no description available & (reliability: 212.0) & (original description: Putative ACP1, Description = Acyl carrier protein 1, chloroplastic, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf04146_284665-290078' '(p08817|acp2_horvu : 120.0) Acyl carrier protein 2, chloroplast precursor (Acyl carrier protein II) (ACP II) - Hordeum vulgare (Barley) & (at5g27200 : 104.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36959 : 104.0) no description available & (reliability: 208.0) & (original description: Putative ACP3, Description = Acyl carrier protein 3, chloroplastic, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf04375_519011-536439' '(at1g65290 : 174.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 129.0) no description available & (reliability: 348.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf05912_259823-263940' '(p07854|acp1_spiol : 102.0) Acyl carrier protein 1, chloroplast precursor (Acyl carrier protein I) (ACP I) - Spinacia oleracea (Spinach) & (gnl|cdd|36959 : 99.0) no description available & (at5g27200 : 89.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative acpP, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf06441_50970-56781' '(at1g65290 : 99.8) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 98.0) no description available & (reliability: 199.6) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf07639_594760-599573' '(at2g44620 : 160.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble.; mitochondrial acyl carrier protein 1 (MTACP-1); FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, cofactor binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 2 (TAIR:AT1G65290.1); Has 7851 Blast hits to 7848 proteins in 2525 species: Archae - 0; Bacteria - 5315; Metazoa - 204; Fungi - 139; Plants - 352; Viruses - 2; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|36959 : 113.0) no description available & (reliability: 320.0) & (original description: Putative MTACP1, Description = Acyl carrier protein 1, mitochondrial, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf10834_250585-262166' '(at1g65290 : 181.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 135.0) no description available & (gnl|cdd|80807 : 84.5) no description available & (reliability: 362.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T
'11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf17787_7262-9803' '(at5g47630 : 115.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. Its role is currently obscure as it is weakly expressed and has not yet been identified by mitochondrial proteome analysis.; mitochondrial acyl carrier protein 3 (mtACP3); FUNCTIONS IN: acyl carrier activity, cofactor binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 7384 Blast hits to 7383 proteins in 2545 species: Archae - 0; Bacteria - 5039; Metazoa - 204; Fungi - 139; Plants - 211; Viruses - 2; Other Eukaryotes - 1789 (source: NCBI BLink). & (gnl|cdd|36959 : 103.0) no description available & (reliability: 230.0) & (original description: Putative MTACP2, Description = Acyl carrier protein 3, mitochondrial, PFAM = PF00550)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.3scaffold10137_4499-8225' '(at4g24230 : 119.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.3scaffold27628_14784-23694' '(at4g24230 : 117.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.5scaffold2203_335926-349153' '(at3g05420 : 841.0) Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35600 : 275.0) no description available & (q39610|dyha_chlre : 80.1) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 1682.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF01344;PF13415;PF00887;PF13418)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf00369_161423-175868' '(at3g05420 : 814.0) Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35600 : 280.0) no description available & (q39610|dyha_chlre : 87.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 1628.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF00887;PF01344;PF13418;PF13415)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf04083_421510-427925' '(at5g53470 : 384.0) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.; acyl-CoA binding protein 1 (ACBP1); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36035 : 120.0) no description available & (gnl|cdd|29261 : 108.0) no description available & (reliability: 768.0) & (original description: Putative ACBP1, Description = Acyl-CoA-binding domain-containing protein 1, PFAM = PF13637;PF00887)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf08843_284353-290023' '(at4g24230 : 120.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding domain-containing protein 3, PFAM = PF00887)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf19261_114064-118115' '(at4g24230 : 106.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding domain-containing protein 3, PFAM = PF00887)' T
'11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf32453_36898-41059' '(o04066|acbp_ricco : 138.0) Acyl-CoA-binding protein (ACBP) - Ricinus communis (Castor bean) & (at1g31812 : 119.0) Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.; acyl-CoA-binding protein 6 (ACBP6); FUNCTIONS IN: phosphatidylcholine binding, acyl-CoA binding; INVOLVED IN: response to freezing, response to cold, lipid transport; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 1 (TAIR:AT5G53470.1); Has 1828 Blast hits to 1828 proteins in 405 species: Archae - 0; Bacteria - 293; Metazoa - 888; Fungi - 180; Plants - 233; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|64738 : 112.0) no description available & (gnl|cdd|36035 : 92.0) no description available & (reliability: 238.0) & (original description: Putative acbp3, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'nbv0.5scaffold364_628247-738730' '(gnl|cdd|67043 : 293.0) no description available & (at1g43800 : 292.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p22337|stad_ricco : 257.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (reliability: 584.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben044scf00036794ctg000_1-5408' '(p46253|stad_soltu : 685.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (gnl|cdd|67043 : 625.0) no description available & (at2g43710 : 615.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00505_422344-424684' '(gnl|cdd|67043 : 135.0) no description available & (p46253|stad_soltu : 110.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (at1g43800 : 104.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00809_132681-138884' '(p22337|stad_ricco : 728.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (at2g43710 : 678.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|67043 : 631.0) no description available & (reliability: 1356.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00863_1032008-1037430' '(p46253|stad_soltu : 703.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (at2g43710 : 631.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|67043 : 620.0) no description available & (reliability: 1262.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf26075_3565-7939' '(gnl|cdd|67043 : 525.0) no description available & (at1g43800 : 513.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p46253|stad_soltu : 471.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (reliability: 1026.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T
'11.1.20' 'lipid metabolism.FA synthesis and FA elongation.MCD' 'niben044scf00011308ctg002_1158-6456' '(at4g04320 : 243.0) malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38228 : 221.0) no description available & (gnl|cdd|68849 : 203.0) no description available & (reliability: 486.0) & (original description: Putative Mlycd, Description = Mlycd protein, PFAM = PF05292)' T
'11.1.20' 'lipid metabolism.FA synthesis and FA elongation.MCD' 'niben101scf09590_32436-44116' '(at4g04320 : 627.0) malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38228 : 355.0) no description available & (gnl|cdd|68849 : 337.0) no description available & (reliability: 1254.0) & (original description: Putative matA, Description = Malonyl-CoA decarboxylase, PFAM = PF05292;PF17408)' T
'11.1.30' 'lipid metabolism.FA synthesis and FA elongation.pyruvate kinase' 'niben101scf00276_790989-803005' '(q40546|kpyg_tobac : 998.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at1g32440 : 758.0) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.; plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink). & (gnl|cdd|37534 : 506.0) no description available & (gnl|cdd|30817 : 464.0) no description available & (reliability: 1516.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T
'11.1.30' 'lipid metabolism.FA synthesis and FA elongation.pyruvate kinase' 'niben101scf06684_344827-354906' '(at5g52920 : 950.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40546|kpyg_tobac : 746.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37534 : 534.0) no description available & (gnl|cdd|81761 : 477.0) no description available & (reliability: 1900.0) & (original description: Putative PKP2, Description = Plastidial pyruvate kinase 2, PFAM = PF02887;PF00224)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'nbv0.3scaffold322_129476-137593' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 514.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1296.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'nbv0.5scaffold2050_64698-78135' '(at3g25860 : 521.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 402.0) no description available & (gnl|cdd|84002 : 351.0) no description available & (reliability: 1042.0) & (original description: Putative aceF, Description = Branched-chain alpha-keto acid dehydrogenase subunit E2, PFAM = PF00364;PF02817;PF00198)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben044scf00026414ctg006_2935-6231' '(at3g25860 : 463.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 360.0) no description available & (gnl|cdd|84002 : 317.0) no description available & (reliability: 926.0) & (original description: Putative LTA2, Description = Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic, PFAM = PF02817;PF00198;PF00364)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben044scf00055337ctg002_1-8010' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 561.0) no description available & (gnl|cdd|81943 : 544.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1770.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf00332_548090-558842' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 566.0) no description available & (gnl|cdd|81943 : 548.0) no description available & (p31023|dldh_pea : 236.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1770.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf00466_488120-497396' '(at3g16950 : 583.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|36549 : 370.0) no description available & (gnl|cdd|81943 : 363.0) no description available & (p31023|dldh_pea : 143.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative dld2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf02517_1816765-1832955' '(at3g25860 : 519.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 395.0) no description available & (gnl|cdd|84002 : 359.0) no description available & (reliability: 1038.0) & (original description: Putative LTA2, Description = Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic, PFAM = PF00364;PF02817;PF00198)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf04473_319942-329009' '(at4g16155 : 862.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 551.0) no description available & (gnl|cdd|81943 : 537.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1724.0) & (original description: Putative lpdA, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf07691_2396-11872' '(at4g16155 : 840.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 558.0) no description available & (gnl|cdd|81943 : 541.0) no description available & (p31023|dldh_pea : 234.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1680.0) & (original description: Putative lpd2, Description = Lipoamide dehydrogenase, PFAM = PF07992;PF02852)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf10390_43569-56591' '(at1g30120 : 629.0) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.; pyruvate dehydrogenase E1 beta (PDH-E1 BETA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plastid pyruvate dehydrogenase complex, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT2G34590.1); Has 14229 Blast hits to 14219 proteins in 2378 species: Archae - 200; Bacteria - 8952; Metazoa - 481; Fungi - 222; Plants - 270; Viruses - 0; Other Eukaryotes - 4104 (source: NCBI BLink). & (gnl|cdd|79356 : 595.0) no description available & (gnl|cdd|35744 : 518.0) no description available & (q9mur4|odpb_mesvi : 419.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1254.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, PFAM = PF02780;PF02779)' T
'11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf14210_124631-132800' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 515.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1296.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T
'11.1.1001' 'lipid metabolism.FA synthesis and FA elongation' 'eicosanoate' '' M
'11.1.1002' 'lipid metabolism.FA synthesis and FA elongation' 'nonanoate' '' M
'11.1.1003' 'lipid metabolism.FA synthesis and FA elongation' 'tetradecanoic acid' '' M
'11.2' 'lipid metabolism.FA desaturation' '' ''
'11.2.1' 'lipid metabolism.FA desaturation.desaturase' 'niben044scf00008106ctg004_4226-7732' '(at3g15850 : 452.0) Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.; fatty acid desaturase 5 (FAD5); CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT3G15870.1); Has 3424 Blast hits to 3424 proteins in 822 species: Archae - 0; Bacteria - 1534; Metazoa - 801; Fungi - 236; Plants - 106; Viruses - 4; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|36813 : 358.0) no description available & (gnl|cdd|31588 : 240.0) no description available & (reliability: 904.0) & (original description: Putative ADS3, Description = Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic, PFAM = PF00487)' T
'11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'nbv0.3scaffold32012_8144-14933' '(at2g34770 : 365.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 304.0) no description available & (reliability: 730.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T
'11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'nbv0.5scaffold8188_31858-38665' '(at2g34770 : 366.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 305.0) no description available & (reliability: 732.0) & (original description: Putative fa2h, Description = Ceramide very long chain fatty acid hydroxylase, PFAM = PF04116)' T
'11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'niben101scf06685_38975-43466' '(at2g34770 : 368.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 303.0) no description available & (reliability: 736.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T
'11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'niben101scf32747_25687-30669' '(at2g34770 : 289.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 275.0) no description available & (reliability: 578.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold2743_25020-69963' '(p48619|fad3c_ricco : 605.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 595.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1190.0) & (original description: Putative FAD7, Description = Chloroplast glycerolipid omega-3-fatty acid desaturase, PFAM = PF11960;PF00487)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold4227_22814-55545' '(p48626|fad3e_tobac : 610.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at3g11170 : 553.0) Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.; fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1106.0) & (original description: Putative FAD3, Description = Omega-3 fatty acid desaturase, endoplasmic reticulum, PFAM = PF00487;PF11960)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold5323_109571-113684' '(p48619|fad3c_ricco : 663.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 641.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 228.0) no description available & (reliability: 1282.0) & (original description: Putative FAD7, Description = Omega-3 fatty acid desaturase, chloroplastic, PFAM = PF11960;PF00487)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf00318_988225-992285' '(p48619|fad3c_ricco : 674.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 644.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 223.0) no description available & (reliability: 1288.0) & (original description: Putative FAD7, Description = Omega-3 fatty acid desaturase, chloroplastic, PFAM = PF11960;PF00487)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf03414_141430-145636' '(p48626|fad3e_tobac : 745.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at2g29980 : 538.0) Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.; fatty acid desaturase 3 (FAD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2074 Blast hits to 2074 proteins in 524 species: Archae - 0; Bacteria - 643; Metazoa - 17; Fungi - 254; Plants - 868; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1076.0) & (original description: Putative FAD3, Description = Omega-3 fatty acid desaturase, endoplasmic reticulum, PFAM = PF00487;PF11960)' T
'11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf11417_118948-123425' '(p48626|fad3e_tobac : 589.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at3g11170 : 535.0) Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.; fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|58173 : 216.0) no description available & (reliability: 1070.0) & (original description: Putative desB, Description = Omega-3 fatty acid desaturase, PFAM = PF00487;PF11960)' T
'11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf00774_178194-188077' '(p48627|fad6c_brana : 659.0) Omega-6 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Brassica napus (Rape) & (at4g30950 : 652.0) Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.; fatty acid desaturase 6 (FAD6); FUNCTIONS IN: omega-6 fatty acid desaturase activity; INVOLVED IN: photoinhibition, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 3227 Blast hits to 3218 proteins in 733 species: Archae - 0; Bacteria - 1371; Metazoa - 67; Fungi - 380; Plants - 896; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (gnl|cdd|58173 : 215.0) no description available & (reliability: 1304.0) & (original description: Putative fad6, Description = Chloroplast omega-6 fatty acid desaturase, PFAM = PF00487)' T
'11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf02374_119817-122902' '(p48631|fd6e2_soybn : 493.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (at3g12120 : 492.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|58173 : 179.0) no description available & (reliability: 984.0) & (original description: Putative FAD12, Description = Delta(12)-acyl-lipid-desaturase, PFAM = PF00487)' T
'11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf06661_76655-79806' '(at3g12120 : 632.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (p48631|fd6e2_soybn : 630.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (gnl|cdd|58173 : 208.0) no description available & (reliability: 1264.0) & (original description: Putative fad2, Description = Fatty acid desaturase 2, PFAM = PF11960;PF00487)' T
'11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf09401_259630-262840' '(at3g12120 : 489.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (p48631|fd6e2_soybn : 488.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (gnl|cdd|58173 : 174.0) no description available & (reliability: 978.0) & (original description: Putative fad2, Description = Delta-12 fatty acid desaturase, PFAM = PF11960;PF00487)' T
'11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf09417_176623-179771' '(p48631|fd6e2_soybn : 593.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (at3g12120 : 590.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|58173 : 219.0) no description available & (reliability: 1180.0) & (original description: Putative FAD12, Description = Delta(12)-acyl-lipid-desaturase, PFAM = PF11960;PF00487)' T
'11.2.1001' 'lipid metabolism.FA desaturation' '9,12-octadecadieneoic acid' '' M
'11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold1369_58791-66156' '(q9m571|peamt_spiol : 830.0) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (at1g73600 : 822.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink). & (gnl|cdd|36483 : 286.0) no description available & (gnl|cdd|32411 : 100.0) no description available & (reliability: 1644.0) & (original description: Putative pmt, Description = Zgc:153034, PFAM = PF08241;PF13649)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold18126_9083-17076' '(at2g39290 : 242.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 156.0) no description available & (gnl|cdd|83521 : 135.0) no description available & (reliability: 484.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold24443_10525-14585' '(at2g38110 : 546.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.5scaffold2824_29653-34545' '(at1g06520 : 601.0) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.; glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1202.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF12710;PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00000747ctg008_1-4817' '(at1g15110 : 568.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 419.0) no description available & (gnl|cdd|66691 : 374.0) no description available & (reliability: 1136.0) & (original description: Putative PTDSS2, Description = Phosphatidylserine synthase 2, PFAM = PF03034)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00014872ctg004_512-7582' '(at2g39290 : 281.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 142.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 562.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00014872ctg004_5148-7657' '(at3g55030 : 80.9) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00026025ctg010_2538-9851' '(q9m571|peamt_spiol : 798.0) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (at1g73600 : 794.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink). & (gnl|cdd|36483 : 275.0) no description available & (gnl|cdd|32411 : 95.3) no description available & (reliability: 1588.0) & (original description: Putative PEAMT, Description = Phosphoethanolamine N-methyltransferase, PFAM = PF13489;PF13649)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00047965ctg002_2002-8295' '(at2g39290 : 187.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 111.0) no description available & (reliability: 374.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00048573ctg006_9311-14154' '(at2g38110 : 760.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1520.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF12710;PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00128_304358-309033' '(at2g38110 : 554.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00369_890251-895134' '(at3g05510 : 494.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G78690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38058 : 297.0) no description available & (gnl|cdd|47863 : 82.7) no description available & (reliability: 988.0) & (original description: Putative BnaA03g29030D, Description = BnaA03g29030D protein, PFAM = PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00884_43945-51712' '(at2g39290 : 267.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 146.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 534.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00884_49270-51797' '(at3g55030 : 83.2) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf01716_56767-61693' '(at1g01610 : 749.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity. Involved in cutin assembly. Is functional redundant of GPAT8.; glycerol-3-phosphate acyltransferase 4 (GPAT4); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 410 Blast hits to 396 proteins in 34 species: Archae - 0; Bacteria - 20; Metazoa - 10; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1498.0) & (original description: Putative GPAT4, Description = Glycerol-3-phosphate 2-O-acyltransferase 4, PFAM = PF12710;PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02085_1007586-1011061' '(at2g38110 : 494.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 988.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553;PF12710)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02541_671725-678269' '(at4g04870 : 278.0) Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria.; cardiolipin synthase (CLS); FUNCTIONS IN: phosphatidyltransferase activity, cardiolipin synthase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36830 : 170.0) no description available & (reliability: 556.0) & (original description: Putative CLS, Description = Cardiolipin synthase (CMP-forming), mitochondrial, PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02806_103077-107519' '(at2g38110 : 506.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02919_424387-432031' '(at3g18000 : 778.0) Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.; XIPOTL 1 (XPL1); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G48600.2); Has 22524 Blast hits to 22132 proteins in 2666 species: Archae - 571; Bacteria - 16701; Metazoa - 242; Fungi - 923; Plants - 574; Viruses - 10; Other Eukaryotes - 3503 (source: NCBI BLink). & (q9fr44|peam1_arath : 778.0) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|36483 : 245.0) no description available & (gnl|cdd|32411 : 94.2) no description available & (reliability: 1556.0) & (original description: Putative pmt, Description = Phosphoethanolamine N-methyltransferase, PFAM = PF08241;PF13489)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf03795_13499-19915' '(at1g06520 : 564.0) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.; glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative GPAT1, Description = Glycerol-3-phosphate acyltransferase 1, PFAM = PF12710)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf04024_121662-129072' '(at1g15110 : 696.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 503.0) no description available & (gnl|cdd|66691 : 384.0) no description available & (reliability: 1392.0) & (original description: Putative PSS1, Description = CDP-diacylglycerol--serine O-phosphatidyltransferase 1, PFAM = PF03034)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf05009_19015-27163' '(at2g39290 : 177.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 110.0) no description available & (reliability: 354.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf05629_64058-68038' '(at3g11430 : 634.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf06950_1190-8825' '(at2g46090 : 481.0) Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.; Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Conserved hypothetical protein CHP00147 (InterPro:IPR005218); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.2); Has 6078 Blast hits to 6077 proteins in 1657 species: Archae - 15; Bacteria - 4829; Metazoa - 327; Fungi - 124; Plants - 145; Viruses - 0; Other Eukaryotes - 638 (source: NCBI BLink). & (gnl|cdd|31785 : 195.0) no description available & (gnl|cdd|36332 : 183.0) no description available & (reliability: 962.0) & (original description: Putative LCKB2, Description = Sphingoid long-chain bases kinase 2, mitochondrial, PFAM = PF00781)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf08653_657550-672834' '(at3g18000 : 839.0) Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.; XIPOTL 1 (XPL1); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G48600.2); Has 22524 Blast hits to 22132 proteins in 2666 species: Archae - 571; Bacteria - 16701; Metazoa - 242; Fungi - 923; Plants - 574; Viruses - 10; Other Eukaryotes - 3503 (source: NCBI BLink). & (q9fr44|peam1_arath : 839.0) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|36483 : 277.0) no description available & (gnl|cdd|32411 : 96.1) no description available & (reliability: 1678.0) & (original description: Putative NMT1, Description = Phosphoethanolamine N-methyltransferase 1, PFAM = PF08241;PF13489)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf08973_129217-134131' '(at3g11430 : 655.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative GPAT4, Description = Phospholipid/glycerol acyltransferase, PFAM = PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf10067_306673-311434' '(at3g11430 : 647.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1294.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553)' T
'11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf13601_17094-28883' '(at1g15110 : 689.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 495.0) no description available & (gnl|cdd|66691 : 384.0) no description available & (reliability: 1378.0) & (original description: Putative PSS1, Description = CDP-diacylglycerol--serine O-phosphatidyltransferase 1, PFAM = PF03034)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'nbv0.5scaffold813_511277-519685' '(q41745|lpat_maize : 425.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) - Zea mays (Maize) & (at3g57650 : 418.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36718 : 295.0) no description available & (reliability: 836.0) & (original description: Putative LPAT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase 2, PFAM = PF01553;PF16076)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01124_1622701-1632081' '(at3g57650 : 591.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (q9xfw4|lpat2_brana : 585.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica napus (Rape) & (gnl|cdd|36718 : 336.0) no description available & (reliability: 1182.0) & (original description: Putative LPAT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase 2, PFAM = PF16076;PF01553)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01822_1302499-1323646' '(q39639|plsb_cucsa : 569.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Cucumis sativus (Cucumber) & (at1g32200 : 550.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|65360 : 91.5) no description available & (reliability: 1100.0) & (original description: Putative ATS1, Description = Glycerol-3-phosphate acyltransferase, chloroplastic, PFAM = PF14829;PF01553)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01859_576671-579981' '(at1g75020 : 460.0) lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36718 : 306.0) no description available & (q6iwy1|lpat2_braol : 169.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (reliability: 920.0) & (original description: Putative LPAT4, Description = Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4, PFAM = PF01553;PF16076)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf02436_14899-29826' '(q39639|plsb_cucsa : 565.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Cucumis sativus (Cucumber) & (at1g32200 : 546.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|65360 : 86.9) no description available & (reliability: 1092.0) & (original description: Putative gpat, Description = Glycerol-3-phosphate acyltransferase, chloroplastic, PFAM = PF01553;PF14829)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf05799_95094-107123' '(at1g75020 : 349.0) lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36718 : 230.0) no description available & (q6iwy1|lpat2_braol : 123.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (reliability: 698.0) & (original description: Putative LPAT4, Description = Phospholipid/glycerol acyltransferase family protein, PFAM = PF01553;PF16076)' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf06782_128766-148823' '(q6iwy1|lpat2_braol : 142.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (at3g57650 : 141.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36718 : 105.0) no description available & (reliability: 282.0) & (original description: Putative LPAT, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1, PFAM = )' T
'11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf10575_190316-194733' '(at3g18850 : 460.0) lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1643 Blast hits to 1638 proteins in 497 species: Archae - 0; Bacteria - 573; Metazoa - 538; Fungi - 198; Plants - 153; Viruses - 6; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36718 : 288.0) no description available & (q6iwy1|lpat2_braol : 172.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47863 : 82.3) no description available & (reliability: 920.0) & (original description: Putative LPAT5, Description = Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5, PFAM = PF01553;PF16076)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'nbv0.5scaffold1588_314581-320861' '(at1g71697 : 428.0) Encodes choline kinase. mRNA levels are increased in response to wounding.; choline kinase 1 (CK1); FUNCTIONS IN: choline kinase activity; INVOLVED IN: response to salt stress, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline kinase, N-terminal (InterPro:IPR007521), Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1492 Blast hits to 1438 proteins in 366 species: Archae - 0; Bacteria - 350; Metazoa - 439; Fungi - 247; Plants - 163; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|37897 : 351.0) no description available & (gnl|cdd|85580 : 251.0) no description available & (reliability: 856.0) & (original description: Putative CK1, Description = Probable choline kinase 1, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf00271_910736-921499' '(at1g74320 : 474.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 332.0) no description available & (gnl|cdd|85580 : 245.0) no description available & (reliability: 948.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf01060_265360-271660' '(at1g74320 : 468.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 334.0) no description available & (gnl|cdd|85580 : 250.0) no description available & (reliability: 936.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf02312_36110-51678' '(at2g26830 : 523.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|39918 : 392.0) no description available & (gnl|cdd|85580 : 213.0) no description available & (reliability: 1046.0) & (original description: Putative EMB1187, Description = Probable ethanolamine kinase, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf04103_503254-517019' '(at2g26830 : 530.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|39918 : 396.0) no description available & (gnl|cdd|85580 : 212.0) no description available & (reliability: 1060.0) & (original description: Putative EMB1187, Description = Probable ethanolamine kinase, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf09156_4455-107900' '(at1g71697 : 177.0) Encodes choline kinase. mRNA levels are increased in response to wounding.; choline kinase 1 (CK1); FUNCTIONS IN: choline kinase activity; INVOLVED IN: response to salt stress, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline kinase, N-terminal (InterPro:IPR007521), Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1492 Blast hits to 1438 proteins in 366 species: Archae - 0; Bacteria - 350; Metazoa - 439; Fungi - 247; Plants - 163; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|37897 : 147.0) no description available & (gnl|cdd|85580 : 131.0) no description available & (reliability: 354.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T
'11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf20077_17643-22658' '(at1g74320 : 447.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 353.0) no description available & (gnl|cdd|85580 : 250.0) no description available & (reliability: 894.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.3scaffold18126_9083-17076' '(at2g39290 : 242.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 156.0) no description available & (gnl|cdd|83521 : 135.0) no description available & (reliability: 466.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.3scaffold54407_1-13641' '(at3g60620 : 402.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 286.0) no description available & (gnl|cdd|85270 : 166.0) no description available & (reliability: 804.0) & (original description: Putative CDS5, Description = Phosphatidate cytidylyltransferase 5, chloroplastic, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.5scaffold501_164246-178573' '(at3g60620 : 431.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 284.0) no description available & (gnl|cdd|85270 : 161.0) no description available & (reliability: 862.0) & (original description: Putative CDS4, Description = Phosphatidate cytidylyltransferase 4, chloroplastic, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00014872ctg004_512-7582' '(at2g39290 : 281.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 142.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 554.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00014872ctg004_5148-7657' '(at3g55030 : 80.9) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00047965ctg002_2002-8295' '(at2g39290 : 187.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 111.0) no description available & (reliability: 362.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00058295ctg002_1265-5156' '(at3g60620 : 145.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 121.0) no description available & (gnl|cdd|85270 : 98.9) no description available & (reliability: 290.0) & (original description: Putative cdsA, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00288_1249098-1254751' '(q2n2k0|phyk3_soybn : 339.0) Probable phytol kinase 3, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (at5g58560 : 333.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39654 : 184.0) no description available & (reliability: 666.0) & (original description: Putative FOLK, Description = Farnesol kinase, chloroplastic, PFAM = )' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00288_1250135-1252529' '(at5g58560 : 86.7) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative FOLK, Description = Putative phytol kinase 3, chloroplastic, PFAM = )' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00486_313177-322340' '(o04940|cds1_soltu : 783.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 658.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 500.0) no description available & (gnl|cdd|85270 : 179.0) no description available & (reliability: 1316.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase 1, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00884_43945-51712' '(at2g39290 : 267.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 146.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 526.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00884_49270-51797' '(at3g55030 : 83.2) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf02362_314223-321179' '(at5g58560 : 268.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q2n2k0|phyk3_soybn : 262.0) Probable phytol kinase 3, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (gnl|cdd|39654 : 155.0) no description available & (reliability: 536.0) & (original description: Putative BnaA03g56250D, Description = BnaA03g56250D protein, PFAM = )' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03599_186400-202123' '(at3g60620 : 437.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 291.0) no description available & (gnl|cdd|85270 : 165.0) no description available & (reliability: 874.0) & (original description: Putative CDS4, Description = Phosphatidate cytidylyltransferase 4, chloroplastic, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03824_315923-328714' '(o04940|cds1_soltu : 713.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 655.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 509.0) no description available & (gnl|cdd|85270 : 174.0) no description available & (reliability: 1310.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase 1, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03824_322229-325289' '(at1g62430 : 246.0) Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis.; CDP-diacylglycerol synthase 1 (CDS1); CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 2 (TAIR:AT4G22340.1); Has 7098 Blast hits to 7086 proteins in 2534 species: Archae - 0; Bacteria - 4982; Metazoa - 186; Fungi - 135; Plants - 138; Viruses - 0; Other Eukaryotes - 1657 (source: NCBI BLink). & (o04940|cds1_soltu : 239.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (gnl|cdd|36653 : 190.0) no description available & (reliability: 492.0) & (original description: Putative cds1, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf04987_115660-126669' '(o04940|cds1_soltu : 614.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 550.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 421.0) no description available & (gnl|cdd|85270 : 175.0) no description available & (reliability: 1100.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf05009_19015-27163' '(at2g39290 : 177.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 110.0) no description available & (reliability: 342.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T
'11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf11895_293352-299375' '(at4g26770 : 554.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 7211 Blast hits to 7203 proteins in 2581 species: Archae - 0; Bacteria - 5077; Metazoa - 186; Fungi - 148; Plants - 138; Viruses - 0; Other Eukaryotes - 1662 (source: NCBI BLink). & (o04940|cds1_soltu : 533.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (gnl|cdd|36653 : 460.0) no description available & (gnl|cdd|85270 : 172.0) no description available & (reliability: 1108.0) & (original description: Putative CDS3, Description = Phosphatidate cytidylyltransferase 3, PFAM = PF01148)' T
'11.3.4' 'lipid metabolism.Phospholipid synthesis.CDP-diacylglycerol-inositol 3-phosphatidyltransferase' 'niben101scf01061_746620-759815' '(at1g68000 : 319.0) phosphatidylinositol synthase 1; phosphatidylinositol synthase 1 (PIS1); CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (TAIR:AT4G38570.1); Has 2907 Blast hits to 2907 proteins in 1088 species: Archae - 25; Bacteria - 1785; Metazoa - 167; Fungi - 194; Plants - 81; Viruses - 0; Other Eukaryotes - 655 (source: NCBI BLink). & (gnl|cdd|38450 : 241.0) no description available & (reliability: 638.0) & (original description: Putative PIS1, Description = CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1, PFAM = PF01066)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'nbv0.5scaffold1314_204773-210604' '(at5g63770 : 389.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 224.0) no description available & (gnl|cdd|47394 : 180.0) no description available & (reliability: 778.0) & (original description: Putative BnaA02g33890D, Description = BnaA02g33890D protein, PFAM = PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'nbv0.5scaffold7711_51096-57304' '(at4g21534 : 531.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1). & (gnl|cdd|36332 : 294.0) no description available & (gnl|cdd|31785 : 135.0) no description available & (reliability: 1062.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00008692ctg000_1-3483' '(at4g30340 : 150.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 90.5) no description available & (reliability: 300.0) & (original description: Putative DGK, Description = DAG kinase, PFAM = PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00011051ctg001_17083-23018' '(at5g63770 : 847.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 482.0) no description available & (gnl|cdd|47394 : 173.0) no description available & (reliability: 1694.0) & (original description: Putative DGK2, Description = Diacylglycerol kinase 2, PFAM = PF00781;PF00609;PF00130)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00014753ctg006_15222-25389' '(at2g20900 : 577.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 324.0) no description available & (gnl|cdd|47394 : 108.0) no description available & (reliability: 1154.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00609;PF00609;PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00018163ctg003_7629-16393' '(at2g20900 : 392.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 204.0) no description available & (gnl|cdd|47394 : 109.0) no description available & (reliability: 784.0) & (original description: Putative DGK, Description = Diacylglycerol kinase, PFAM = PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01346_146552-154763' '(at5g07920 : 1102.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 554.0) no description available & (gnl|cdd|47394 : 198.0) no description available & (reliability: 2204.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00781;PF00130;PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01409_984056-1001245' '(at4g30340 : 668.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 408.0) no description available & (gnl|cdd|47394 : 114.0) no description available & (reliability: 1336.0) & (original description: Putative DGK7, Description = Diacylglycerol kinase 7, PFAM = PF00609;PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01594_387802-397833' '(at5g63770 : 982.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 541.0) no description available & (gnl|cdd|47394 : 204.0) no description available & (reliability: 1964.0) & (original description: Putative DGK2, Description = Diacylglycerol kinase 2, PFAM = PF00781;PF00130;PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01635_234013-250175' '(at4g30340 : 665.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 399.0) no description available & (gnl|cdd|47394 : 113.0) no description available & (reliability: 1330.0) & (original description: Putative Os02g0787800, Description = Diacylglycerol kinase, PFAM = PF00781;PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf02646_250332-259514' '(at5g07920 : 1077.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 560.0) no description available & (gnl|cdd|47394 : 203.0) no description available & (reliability: 2154.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00609;PF00781;PF00130)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf02869_459463-471496' '(at2g20900 : 766.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 373.0) no description available & (gnl|cdd|47394 : 123.0) no description available & (reliability: 1532.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00609;PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf05143_80908-93434' '(at4g21540 : 538.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 259.0) no description available & (gnl|cdd|31785 : 116.0) no description available & (reliability: 1066.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf06654_267750-291038' '(at2g20900 : 738.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 367.0) no description available & (gnl|cdd|47394 : 122.0) no description available & (reliability: 1476.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase, PFAM = PF00609;PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf07069_70775-83765' '(at4g21540 : 588.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 291.0) no description available & (gnl|cdd|31785 : 130.0) no description available & (reliability: 1132.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf08443_26777-38163' '(at2g20900 : 619.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 337.0) no description available & (gnl|cdd|47394 : 115.0) no description available & (reliability: 1238.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00781;PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf08721_138025-144800' '(at5g07920 : 1093.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 549.0) no description available & (gnl|cdd|47394 : 200.0) no description available & (reliability: 2186.0) & (original description: Putative DGK, Description = Diacylglycerol kinase, PFAM = PF00609;PF00130;PF00781)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf11806_16591-22922' '(at5g07920 : 1089.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 559.0) no description available & (gnl|cdd|47394 : 206.0) no description available & (reliability: 2178.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00130;PF00781;PF00609)' T
'11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf19517_1-17823' '(at4g30340 : 652.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 392.0) no description available & (gnl|cdd|47394 : 111.0) no description available & (reliability: 1304.0) & (original description: Putative DGK7, Description = Diacylglycerol kinase 7, PFAM = PF00781;PF00609)' T
'11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01559_97254-102966' '(at2g32260 : 412.0) phosphorylcholine cytidylyltransferase (CCT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase2 (TAIR:AT4G15130.1); Has 2466 Blast hits to 2109 proteins in 632 species: Archae - 27; Bacteria - 791; Metazoa - 538; Fungi - 333; Plants - 250; Viruses - 5; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|38015 : 352.0) no description available & (gnl|cdd|28836 : 248.0) no description available & (reliability: 824.0) & (original description: Putative CPCT, Description = Cholinephosphate cytidylyltransferase, PFAM = PF01467)' T
'11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01559_97260-102969' '(at2g32260 : 423.0) phosphorylcholine cytidylyltransferase (CCT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase2 (TAIR:AT4G15130.1); Has 2466 Blast hits to 2109 proteins in 632 species: Archae - 27; Bacteria - 791; Metazoa - 538; Fungi - 333; Plants - 250; Viruses - 5; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|38015 : 346.0) no description available & (gnl|cdd|28836 : 243.0) no description available & (reliability: 846.0) & (original description: Putative CCT1, Description = Choline-phosphate cytidylyltransferase 1, PFAM = PF01467)' T
'11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01739_941595-951096' '(at4g15130 : 354.0) phosphorylcholine cytidylyltransferase2 (CCT2); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 2568 Blast hits to 2194 proteins in 660 species: Archae - 25; Bacteria - 876; Metazoa - 531; Fungi - 328; Plants - 264; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|38015 : 337.0) no description available & (gnl|cdd|28836 : 238.0) no description available & (reliability: 708.0) & (original description: Putative CCT, Description = Choline-phosphate cytidylyltransferase B, PFAM = PF01467)' T
'11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf03525_70380-79870' '(at4g15130 : 363.0) phosphorylcholine cytidylyltransferase2 (CCT2); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 2568 Blast hits to 2194 proteins in 660 species: Archae - 25; Bacteria - 876; Metazoa - 531; Fungi - 328; Plants - 264; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|38015 : 333.0) no description available & (gnl|cdd|28836 : 238.0) no description available & (reliability: 726.0) & (original description: Putative CCT1, Description = Choline-phosphate cytidylyltransferase 1, PFAM = PF01467)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.3scaffold3358_64132-74928' '(at3g23510 : 1020.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 259.0) no description available & (reliability: 2040.0) & (original description: Putative At3g23480, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.3scaffold20024_16948-20159' '(at3g23530 : 116.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_141069-175345' '(at3g23510 : 387.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 228.0) no description available & (reliability: 774.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_272521-296788' '(at3g23530 : 1229.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 287.0) no description available & (reliability: 2458.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF13450)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_274072-289222' '(at3g23530 : 573.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 216.0) no description available & (reliability: 1146.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold5940_44053-97228' '(at3g23510 : 1172.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 264.0) no description available & (reliability: 2344.0) & (original description: Putative At3g23470, Description = At3g23470, PFAM = PF13450;PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold5940_53292-56703' '(at3g23530 : 246.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 100.0) no description available & (reliability: 492.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00019935ctg003_4539-9262' '(at3g23530 : 474.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 224.0) no description available & (reliability: 948.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00020771ctg001_13110-17815' '(at3g23510 : 590.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 276.0) no description available & (reliability: 1180.0) & (original description: Putative BnaCnng54610D, Description = BnaCnng54610D protein, PFAM = PF01593)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00020771ctg001_13837-16582' '(at3g23530 : 171.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF01593)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_20497-48491' '(at3g23530 : 1378.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 332.0) no description available & (reliability: 2756.0) & (original description: Putative azo3309, Description = Conserved hypothetical amine oxidoreductase, PFAM = PF01593;PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_23912-28870' '(at3g23530 : 173.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative At3g23510, Description = Cyclopropane fatty acid synthase, PFAM = )' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_327476-354012' '(at3g23530 : 1185.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 286.0) no description available & (reliability: 2370.0) & (original description: Putative Sb05g026910, Description = Putative uncharacterized protein Sb05g026910, PFAM = PF13450;PF02353;PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_329027-344374' '(at3g23530 : 557.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 178.0) no description available & (reliability: 1114.0) & (original description: Putative At3g23470, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_329110-346328' '(at3g23510 : 706.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 155.0) no description available & (reliability: 1412.0) & (original description: Putative RCOM_1167880, Description = 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative, PFAM = PF02353;PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_502520-628151' '(at3g23510 : 386.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 212.0) no description available & (reliability: 772.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_510016-651587' '(at3g23510 : 1219.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 262.0) no description available & (reliability: 2438.0) & (original description: Putative At3g23470, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF13450)' T
'11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_635769-639578' '(at3g23530 : 251.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 108.0) no description available & (reliability: 502.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T
'11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'nbv0.3scaffold9011_23176-49887' '(at5g57190 : 890.0) Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.; phosphatidylserine decarboxylase 2 (PSD2); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Calcium-binding EF-hand (InterPro:IPR002048), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Phosphatidylserine decarboxylase (InterPro:IPR005221); BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 3 (TAIR:AT4G25970.1); Has 3739 Blast hits to 3658 proteins in 1335 species: Archae - 3; Bacteria - 2361; Metazoa - 260; Fungi - 489; Plants - 195; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|37630 : 678.0) no description available & (gnl|cdd|73832 : 246.0) no description available & (reliability: 1780.0) & (original description: Putative PSD2, Description = Phosphatidylserine decarboxylase proenzyme 2, PFAM = PF02666;PF13202;PF00168)' T
'11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'nbv0.5scaffold4046_87868-115254' '(at5g57190 : 867.0) Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.; phosphatidylserine decarboxylase 2 (PSD2); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Calcium-binding EF-hand (InterPro:IPR002048), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Phosphatidylserine decarboxylase (InterPro:IPR005221); BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 3 (TAIR:AT4G25970.1); Has 3739 Blast hits to 3658 proteins in 1335 species: Archae - 3; Bacteria - 2361; Metazoa - 260; Fungi - 489; Plants - 195; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|37630 : 670.0) no description available & (gnl|cdd|73832 : 246.0) no description available & (reliability: 1734.0) & (original description: Putative PSD2, Description = Phosphatidylserine decarboxylase proenzyme 2, PFAM = PF02666;PF13202)' T
'11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'niben101scf03710_493272-509955' '(at4g16700 : 524.0) Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.; phosphatidylserine decarboxylase 1 (PSD1); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Phosphatidylserine decarboxylase (InterPro:IPR005221); Has 2996 Blast hits to 2984 proteins in 1194 species: Archae - 0; Bacteria - 2050; Metazoa - 197; Fungi - 312; Plants - 68; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (gnl|cdd|37631 : 338.0) no description available & (gnl|cdd|74500 : 160.0) no description available & (reliability: 1048.0) & (original description: Putative PSD1, Description = Phosphatidylserine decarboxylase proenzyme 1, mitochondrial, PFAM = PF02666)' T
'11.3.9' 'lipid metabolism.Phospholipid synthesis.choline monooxygenase' 'nbv0.3scaffold20234_15936-22887' '(at4g29890 : 561.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o04121|chmo_spiol : 449.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Spinacia oleracea (Spinach) & (gnl|cdd|58561 : 212.0) no description available & (reliability: 1122.0) & (original description: Putative cmo1, Description = Choline monooxygenase, PFAM = PF00848;PF00355)' T
'11.3.9' 'lipid metabolism.Phospholipid synthesis.choline monooxygenase' 'niben101scf04852_38986-52272' '(at4g29890 : 561.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o04121|chmo_spiol : 451.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Spinacia oleracea (Spinach) & (gnl|cdd|58561 : 209.0) no description available & (reliability: 1122.0) & (original description: Putative cmo1, Description = Choline monooxygenase, PFAM = PF00355;PF00848)' T
'11.3.10' 'lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase' 'niben101scf04040_704572-709476' '(at4g33110 : 543.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (gnl|cdd|32411 : 206.0) no description available & (reliability: 1086.0) & (original description: Putative cnmt, Description = Coclaurine N-methyltransferase, PFAM = PF02353)' T
'11.3.10' 'lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase' 'niben101scf04040_704949-708583' '(at4g33110 : 378.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (gnl|cdd|32411 : 185.0) no description available & (reliability: 756.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T
'11.4' 'lipid metabolism.TAG synthesis' 'nbv0.3scaffold24011_14297-16755' '(gnl|cdd|65100 : 139.0) no description available & (at5g40420 : 115.0) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29527|oleo6_goshi : 110.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 230.0) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold1849_28904-52712' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 229.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold3164_17232-29057' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold4218_26231-37299' '(at2g19450 : 661.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 363.0) no description available & (gnl|cdd|34661 : 164.0) no description available & (reliability: 1322.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T
'11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold4932_62887-68468' '(gnl|cdd|68610 : 234.0) no description available & (at1g70680 : 194.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative PXG3, Description = Probable peroxygenase 3, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben044scf00013327ctg002_8735-17606' '(at2g19450 : 493.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 303.0) no description available & (gnl|cdd|34661 : 147.0) no description available & (reliability: 986.0) & (original description: Putative DGAT, Description = Putative diacylglycerol acyltransferase, PFAM = PF03062)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben044scf00020084ctg005_1-2725' '(at2g19450 : 182.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 117.0) no description available & (reliability: 364.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf00163_1989255-1992134' '(gnl|cdd|65100 : 129.0) no description available & (p29110|oleo3_brana : 116.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 115.0) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative c3, Description = Oleosin-like protein, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02077_1286993-1289442' '(gnl|cdd|65100 : 135.0) no description available & (p29527|oleo6_goshi : 84.7) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (at5g40420 : 83.2) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02217_271606-274025' '(at2g25890 : 95.5) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65100 : 92.6) no description available & (p29110|oleo3_brana : 85.9) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (reliability: 191.0) & (original description: Putative ole1, Description = Oleosin1, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02376_50603-69192' '(gnl|cdd|68610 : 238.0) no description available & (at1g70670 : 216.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02585_36344-40008' '(at3g01570 : 139.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 516 Blast hits to 516 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 516; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|65100 : 136.0) no description available & (p29527|oleo6_goshi : 115.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 278.0) & (original description: Putative ole2, Description = Oleosin, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02786_431986-434489' '(at3g18570 : 120.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT1G48990.1); Has 346 Blast hits to 346 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 346; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|65100 : 92.6) no description available & (reliability: 240.0) & (original description: Putative Sb09g029350, Description = Putative uncharacterized protein Sb09g029350, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02790_82311-93615' '(at2g19450 : 639.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 343.0) no description available & (gnl|cdd|34661 : 145.0) no description available & (reliability: 1278.0) & (original description: Putative DGAT1, Description = O-acyltransferase, PFAM = PF03062)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf04328_191384-194583' '(gnl|cdd|65100 : 136.0) no description available & (at3g01570 : 110.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 516 Blast hits to 516 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 516; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29528|oleo7_goshi : 99.8) Oleosin 16.4 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 220.0) & (original description: Putative ole2, Description = Oleosin, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf06078_481619-483988' '(gnl|cdd|65100 : 121.0) no description available & (q42980|oleo1_orysa : 99.0) Oleosin 16 kDa (OSE701) - Oryza sativa (Rice) & (at4g25140 : 90.1) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative oleI, Description = Oleosin, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08293_164196-166633' '(gnl|cdd|65100 : 136.0) no description available & (p29110|oleo3_brana : 131.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 129.0) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative c3, Description = Oleosin-like protein, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08368_571714-640609' '(gnl|cdd|68610 : 250.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08368_617692-663536' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf09317_243634-246035' '(gnl|cdd|65100 : 121.0) no description available & (p29110|oleo3_brana : 92.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 90.5) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative c3, Description = Oleosin, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf11744_141088-143552' '(gnl|cdd|65100 : 139.0) no description available & (at5g40420 : 123.0) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29527|oleo6_goshi : 119.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 246.0) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T
'11.4' 'lipid metabolism.TAG synthesis' 'niben101scf16152_46154-62543' '(at2g19450 : 667.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 341.0) no description available & (gnl|cdd|34661 : 140.0) no description available & (reliability: 1334.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T
'11.5' 'lipid metabolism.glyceral metabolism' '' ''
'11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'nbv0.5scaffold2971_178242-183383' '(at1g80460 : 832.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 671.0) no description available & (gnl|cdd|37728 : 537.0) no description available & (reliability: 1664.0) & (original description: Putative GLPK, Description = Glycerol kinase, PFAM = PF02782;PF00370)' T
'11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'niben044scf00032663ctg000_16404-21640' '(at1g80460 : 837.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 671.0) no description available & (gnl|cdd|37728 : 538.0) no description available & (reliability: 1674.0) & (original description: Putative GLPK, Description = Glycerol kinase, PFAM = PF02782;PF00370)' T
'11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'niben044scf00057619ctg001_8929-12317' '(at1g80460 : 386.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 335.0) no description available & (gnl|cdd|37728 : 259.0) no description available & (reliability: 772.0) & (original description: Putative gk, Description = ATP:glycerol 3-phosphotransferase, PFAM = PF02782)' T
'11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'nbv0.3scaffold69145_1-4293' '(at5g40610 : 598.0) NAD-dependent glycerol-3-phosphate dehydrogenase family protein; FUNCTIONS IN: in 9 functions; INVOLVED IN: oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168), NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic (InterPro:IPR017751), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT2G40690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37922 : 475.0) no description available & (gnl|cdd|30589 : 283.0) no description available & (reliability: 1196.0) & (original description: Putative GPDH, Description = Glycerol-3-phosphate dehydrogenase [NAD(+)], PFAM = PF07479;PF01210)' T
'11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben044scf00004562ctg003_3475-8453' '(at2g41540 : 809.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 348.0) no description available & (gnl|cdd|30589 : 113.0) no description available & (reliability: 1618.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF07479;PF01210)' T
'11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf01612_235050-252101' '(at2g41540 : 770.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 347.0) no description available & (gnl|cdd|30589 : 114.0) no description available & (reliability: 1540.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF01210;PF07479)' T
'11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf11084_209066-215498' '(at2g41540 : 812.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 351.0) no description available & (gnl|cdd|30589 : 112.0) no description available & (reliability: 1624.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF01210;PF07479)' T
'11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf14436_60240-66976' '(at2g40690 : 608.0) Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.; GLY1; FUNCTIONS IN: glycerol-3-phosphate dehydrogenase [NAD+] activity; INVOLVED IN: systemic acquired resistance, glycerol-3-phosphate metabolic process, glycerolipid biosynthetic process, glycerolipid metabolic process; LOCATED IN: glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT5G40610.1); Has 8663 Blast hits to 8662 proteins in 2795 species: Archae - 24; Bacteria - 5277; Metazoa - 643; Fungi - 297; Plants - 161; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|80508 : 352.0) no description available & (gnl|cdd|37922 : 320.0) no description available & (reliability: 1216.0) & (original description: Putative GLY1, Description = Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic, PFAM = PF01210;PF07479)' T
'11.5.3' 'lipid metabolism.glyceral metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase' 'niben044scf00015876ctg007_5691-8158' '(gnl|cdd|35265 : 106.0) no description available & (at3g10370 : 105.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|30923 : 87.3) no description available & (reliability: 210.0) & (original description: Putative glpA, Description = Glycerol-3-phosphate dehydrogenase, PFAM = PF01266)' T
'11.5.3' 'lipid metabolism.glyceral metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase' 'niben101scf03252_386785-404208' '(at3g10370 : 1001.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|35265 : 730.0) no description available & (gnl|cdd|30923 : 434.0) no description available & (reliability: 2002.0) & (original description: Putative SDP6, Description = Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial, PFAM = PF01266;PF16901)' T
'11.5.1001' 'lipid metabolism.glyceral metabolism' '1-monohexadecanoglycerol' '' M
'11.5.1002' 'lipid metabolism.glyceral metabolism' '1-monooctodecanoglycerol' '' M
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold426_110256-115332' '(at1g27950 : 132.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative LTPG1, Description = Non-specific lipid transfer protein GPI-anchored 1, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold20600_26087-31130' '(at1g64720 : 466.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 257.0) no description available & (gnl|cdd|29139 : 116.0) no description available & (reliability: 932.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold28265_11640-15954' '(at1g21360 : 193.0) glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38431 : 157.0) no description available & (gnl|cdd|87613 : 148.0) no description available & (reliability: 386.0) & (original description: Putative GLTP3, Description = Glycolipid transfer protein 3, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.5scaffold2342_194370-199769' '(at1g27950 : 132.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Ltp2, Description = Lipid transfer protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00005988ctg011_10996-14650' '(q42952|nltp1_tobac : 151.0) Nonspecific lipid-transfer protein 1 precursor (LTP 1) (Pathogenesis-related protein 14) (PR-14) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|72939 : 99.6) no description available & (at3g51590 : 87.4) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 12 (LTP12); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: D pollen mother cell meiosis stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 1073 Blast hits to 1072 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1069; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative LTP1, Description = Non-specific lipid-transfer protein 1, PFAM = PF00234)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00013910ctg003_174-3383' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative MTR_3g083760, Description = Lipid transfer protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00049536ctg000_20512-26217' '(at2g33470 : 323.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 213.0) no description available & (gnl|cdd|87613 : 200.0) no description available & (reliability: 646.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00103_51922-54749' '(q9m5x7|nltp_maldo : 107.0) Nonspecific lipid-transfer protein precursor (LTP) (Allergen Mal d 3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|72939 : 106.0) no description available & (at3g08770 : 99.0) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 198.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00225_598443-603244' '(at1g64720 : 457.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 258.0) no description available & (gnl|cdd|29139 : 118.0) no description available & (reliability: 914.0) & (original description: Putative At5g54170, Description = Lipid-binding START domain-containing protein, PFAM = PF01852)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00367_206019-209567' '(at2g33470 : 314.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 215.0) no description available & (gnl|cdd|87613 : 186.0) no description available & (reliability: 628.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00541_626057-630371' '(at1g21360 : 195.0) glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38431 : 157.0) no description available & (gnl|cdd|87613 : 148.0) no description available & (reliability: 374.0) & (original description: Putative GLTP3, Description = Glycolipid transfer protein 3, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00944_756107-761486' '(at2g33470 : 323.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 214.0) no description available & (gnl|cdd|87613 : 200.0) no description available & (reliability: 646.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf02006_160160-163973' '(at2g44300 : 153.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03101_10910-14287' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Os07g0198300, Description = Lipid binding protein, putative, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03293_41250-44093' '(at2g44300 : 127.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AtXYP10, Description = Lipid binding protein, putative, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03864_26363-31406' '(at1g64720 : 468.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 257.0) no description available & (gnl|cdd|29139 : 116.0) no description available & (reliability: 936.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf04556_448226-451482' '(at2g44300 : 176.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative YLS3, Description = Protein YLS3, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf04600_119698-122066' '(gnl|cdd|72939 : 102.0) no description available & (q9m5x7|nltp_maldo : 96.3) Nonspecific lipid-transfer protein precursor (LTP) (Allergen Mal d 3) - Malus domestica (Apple) (Malus sylvestris) & (at5g59320 : 85.5) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 3 (LTP3); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus; LOCATED IN: cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 4 (TAIR:AT5G59310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf07080_348157-352631' '(at1g27950 : 130.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Ltp2, Description = GPI-anchored protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf07590_629560-634263' '(at1g64720 : 456.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 256.0) no description available & (gnl|cdd|29139 : 111.0) no description available & (reliability: 912.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf08679_211150-214988' '(at2g44300 : 156.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf11497_378748-383561' '(at2g44300 : 133.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative YLS3, Description = Putative GPI-anchored protein At1g27950 family, PFAM = PF14368)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf13203_1295-4015' '(gnl|cdd|72939 : 99.6) no description available & (p27631|nltp_dauca : 95.1) Nonspecific lipid-transfer protein precursor (LTP) (Extracellular protein 2) - Daucus carota (Carrot) & (at3g08770 : 88.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 177.2) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf15342_10154-12498' '(q42952|nltp1_tobac : 94.4) Nonspecific lipid-transfer protein 1 precursor (LTP 1) (Pathogenesis-related protein 14) (PR-14) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|72939 : 93.4) no description available & (at2g38540 : 88.2) Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 1 (LP1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: lipid transport; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 2 (TAIR:AT2G38530.1); Has 1149 Blast hits to 1148 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative ltp2, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf20768_109288-115041' '(at3g21260 : 154.0) Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 501 Blast hits to 501 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 110; Plants - 118; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|87613 : 124.0) no description available & (gnl|cdd|38431 : 118.0) no description available & (reliability: 308.0) & (original description: Putative GLTP2, Description = Glycolipid transfer protein (GLTP) family protein, PFAM = PF08718)' T
'11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf29144_71016-73870' '(gnl|cdd|72939 : 101.0) no description available & (q42762|nltp1_goshi : 95.9) Nonspecific lipid-transfer protein precursor (LTP) - Gossypium hirsutum (Upland cotton) & (at5g59310 : 90.5) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 4 (LTP4); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus, lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold15105_477-38985' '(at1g54570 : 811.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 1622.0) & (original description: Putative At1g54570, Description = Acyltransferase-like protein At1g54570, chloroplastic, PFAM = PF12146;PF03982)' T
'11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold32627_13000-21744' '(at3g02030 : 423.0) transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146;PF03982)' T
'11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold72851_1347-8207' '(at1g01020 : 200.0) ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38344 : 133.0) no description available & (gnl|cdd|67761 : 133.0) no description available & (reliability: 370.0) & (original description: Putative ARV1, Description = ARV1, PFAM = PF04161)' T
'11.7' 'lipid metabolism.unassigned' 'nbv0.5scaffold1127_158489-163969' '(at1g54570 : 274.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T
'11.7' 'lipid metabolism.unassigned' 'niben044scf00000631ctg003_470-7680' '(at1g54570 : 340.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T
'11.7' 'lipid metabolism.unassigned' 'niben044scf00031787ctg006_8931-11923' '(at1g54570 : 230.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = )' T
'11.7' 'lipid metabolism.unassigned' 'niben044scf00031787ctg009_961-8940' '(at1g54570 : 182.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = )' T
'11.7' 'lipid metabolism.unassigned' 'niben101scf00109_212200-227863' '(at5g41130 : 700.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1). & (reliability: 1286.0) & (original description: Putative At3g26840, Description = Acyltransferase-like protein At3g26840, chloroplastic, PFAM = PF12146;PF03982)' T
'11.7' 'lipid metabolism.unassigned' 'niben101scf04396_283621-290359' '(at1g54570 : 372.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T
'11.7' 'lipid metabolism.unassigned' 'niben101scf09234_268937-276075' '(at1g54570 : 414.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF03982)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold4297_12701-15500' '(at5g42890 : 175.0) sterol carrier protein 2 (SCP2); FUNCTIONS IN: oxidoreductase activity, sterol binding; INVOLVED IN: glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination; LOCATED IN: peroxisome; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: SCP2 sterol-binding domain (InterPro:IPR003033), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39372 : 109.0) no description available & (reliability: 350.0) & (original description: Putative SCP2, Description = Putative uncharacterized protein At5g42890, PFAM = PF02036)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 490.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold72071_1128-7562' '(at1g76150 : 275.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|48043 : 163.0) no description available & (gnl|cdd|36420 : 142.0) no description available & (reliability: 550.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold84757_196-5257' '(at4g27270 : 314.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 292.0) no description available & (gnl|cdd|81206 : 220.0) no description available & (reliability: 628.0) & (original description: Putative BQR, Description = Benzoquinone reductase, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.5scaffold50_1143475-1157317' '(at1g10030 : 155.0) homolog of yeast ergosterol28 (ERG28); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Erg28-like (InterPro:IPR005352); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|86401 : 118.0) no description available & (gnl|cdd|38665 : 109.0) no description available & (reliability: 310.0) & (original description: Putative At1g10030, Description = Ergosterol biosynthetic protein 28, PFAM = PF03694)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.5scaffold5023_148741-154571' '(at4g27270 : 299.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 297.0) no description available & (gnl|cdd|81206 : 225.0) no description available & (reliability: 598.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00003561ctg015_1-1437' '(at5g07010 : 100.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ST2A, Description = Sulfotransferase, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00012398ctg002_3453-9887' '(at1g76150 : 374.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|36420 : 193.0) no description available & (gnl|cdd|48043 : 163.0) no description available & (reliability: 748.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00015098ctg006_19173-23433' '(at4g27270 : 314.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 292.0) no description available & (gnl|cdd|81206 : 224.0) no description available & (reliability: 628.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00022117ctg014_1-1761' '(at1g76150 : 149.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00040712ctg000_174-6470' '(at5g58800 : 318.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: Quinone reductase family protein (TAIR:AT4G27270.1); Has 3250 Blast hits to 3250 proteins in 1056 species: Archae - 62; Bacteria - 2436; Metazoa - 2; Fungi - 274; Plants - 202; Viruses - 1; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|38345 : 290.0) no description available & (gnl|cdd|81206 : 204.0) no description available & (reliability: 636.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00046540ctg002_1-1452' '(at4g36750 : 115.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 96.5) no description available & (reliability: 230.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = )' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00090_752573-755604' '(at5g42890 : 176.0) sterol carrier protein 2 (SCP2); FUNCTIONS IN: oxidoreductase activity, sterol binding; INVOLVED IN: glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination; LOCATED IN: peroxisome; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: SCP2 sterol-binding domain (InterPro:IPR003033), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39372 : 109.0) no description available & (reliability: 352.0) & (original description: Putative SCP2, Description = Putative uncharacterized protein At5g42890, PFAM = PF02036)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00163_1968387-1971367' '(gnl|cdd|36797 : 270.0) no description available & (at1g13420 : 243.0) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment.; sulfotransferase 4B (ST4B); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2771 Blast hits to 2728 proteins in 191 species: Archae - 0; Bacteria - 215; Metazoa - 1679; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|84950 : 200.0) no description available & (reliability: 486.0) & (original description: Putative SOT8, Description = Cytosolic sulfotransferase 8, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00637_369607-372629' '(gnl|cdd|36797 : 329.0) no description available & (at5g07010 : 325.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 217.0) no description available & (reliability: 650.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 446.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf02375_252401-258927' '(at1g10030 : 155.0) homolog of yeast ergosterol28 (ERG28); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Erg28-like (InterPro:IPR005352); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|86401 : 119.0) no description available & (gnl|cdd|38665 : 110.0) no description available & (reliability: 310.0) & (original description: Putative At1g10030, Description = Ergosterol biosynthetic protein 28, PFAM = PF03694)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf02440_16023-20495' '(at4g27270 : 315.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 294.0) no description available & (gnl|cdd|81206 : 220.0) no description available & (reliability: 630.0) & (original description: Putative FQR1, Description = NAD(P)H dehydrogenase (quinone) FQR1, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf03015_53244-60651' '(at4g36750 : 311.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 263.0) no description available & (gnl|cdd|81206 : 200.0) no description available & (reliability: 622.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 420.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 532.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04240_51321-58064' '(at4g36750 : 315.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 279.0) no description available & (gnl|cdd|81206 : 208.0) no description available & (reliability: 630.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04438_213311-216315' '(gnl|cdd|36797 : 353.0) no description available & (at2g03760 : 328.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|84950 : 231.0) no description available & (reliability: 648.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf05385_224888-231322' '(at1g76150 : 358.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|36420 : 192.0) no description available & (gnl|cdd|48043 : 163.0) no description available & (reliability: 716.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf06112_216341-223149' '(at4g36750 : 317.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 277.0) no description available & (gnl|cdd|81206 : 207.0) no description available & (reliability: 634.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf21257_32350-38211' '(at4g36750 : 311.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 285.0) no description available & (gnl|cdd|81206 : 215.0) no description available & (reliability: 622.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T
'11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf24053_19310-22308' '(at2g03760 : 342.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|36797 : 337.0) no description available & (gnl|cdd|84950 : 223.0) no description available & (reliability: 668.0) & (original description: Putative SOT12, Description = Cytosolic sulfotransferase 12, PFAM = PF00685)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold10503_42144-48313' '(at3g58490 : 478.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 264.0) no description available & (gnl|cdd|48092 : 127.0) no description available & (reliability: 956.0) & (original description: Putative LPPD, Description = Lipid phosphate phosphatase delta, PFAM = PF01569)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold25858_1-7617' '(at1g13580 : 284.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 261.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|86441 : 179.0) no description available & (gnl|cdd|36820 : 176.0) no description available & (reliability: 568.0) & (original description: Putative Os09g0372700, Description = Os09g0372700 protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold40666_13556-16872' '(at2g46210 : 652.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 395.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1304.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold72851_1347-8207' '(at1g01020 : 200.0) ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38344 : 133.0) no description available & (gnl|cdd|67761 : 133.0) no description available & (reliability: 400.0) & (original description: Putative ARV1, Description = ARV1, PFAM = PF04161)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold44_193869-203229' '(at1g27980 : 842.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 789.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 516.0) no description available & (gnl|cdd|30425 : 253.0) no description available & (reliability: 1684.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold4331_121301-130067' '(at3g06470 : 225.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 142.0) no description available & (gnl|cdd|85273 : 97.0) no description available & (reliability: 450.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold4748_119314-121854' '(q6eun0|ascl1_orysa : 181.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 179.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 101.0) no description available & (reliability: 358.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold7711_51096-57304' '(at4g21534 : 531.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1). & (gnl|cdd|36332 : 294.0) no description available & (gnl|cdd|31785 : 135.0) no description available & (reliability: 1052.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00000016ctg013_23315-29592' '(at1g69640 : 372.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 367.0) no description available & (gnl|cdd|32818 : 103.0) no description available & (reliability: 744.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00001096ctg000_13002-16735' '(at2g46210 : 653.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 391.0) no description available & (gnl|cdd|58172 : 192.0) no description available & (reliability: 1306.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00004752ctg003_920-7466' '(at3g19260 : 340.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 311.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 223.0) no description available & (gnl|cdd|86441 : 208.0) no description available & (reliability: 680.0) & (original description: Putative LAG2, Description = LAG1 longevity assurance homolog 2, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00005291ctg004_1878-8221' '(at4g22330 : 399.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 212.0) no description available & (gnl|cdd|37540 : 187.0) no description available & (reliability: 798.0) & (original description: Putative ATCES1, Description = Alkaline ceramidase 3, PFAM = PF05875)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00009823ctg002_2434-7131' '(at1g13580 : 214.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 188.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 131.0) no description available & (gnl|cdd|86441 : 129.0) no description available & (reliability: 428.0) & (original description: Putative Os09g0372700, Description = Os09g0372700 protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00010763ctg010_9109-14680' '(at3g06060 : 410.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 318.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 820.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00010763ctg010_9139-14693' '(at3g06060 : 412.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 319.0) no description available & (gnl|cdd|30648 : 157.0) no description available & (reliability: 824.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00015043ctg013_2287-5145' '(q6eun0|ascl1_orysa : 190.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 188.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 104.0) no description available & (gnl|cdd|86441 : 81.8) no description available & (reliability: 376.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00022114ctg006_46145-49014' '(at4g36830 : 319.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 160.0) no description available & (reliability: 594.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00029924ctg001_7626-14018' '(at1g13580 : 419.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 393.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 251.0) no description available & (gnl|cdd|86441 : 215.0) no description available & (reliability: 838.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00043523ctg002_1527-5076' '(at3g25540 : 306.0) LAG1 homolog 1; LONGEVITY ASSURANCE GENE 1 (LAG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1255 Blast hits to 1255 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 304; Plants - 188; Viruses - 3; Other Eukaryotes - 169 (source: NCBI BLink). & (q6eun0|ascl1_orysa : 305.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 214.0) no description available & (gnl|cdd|86441 : 210.0) no description available & (reliability: 612.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00051080ctg000_486-6334' '(at3g19260 : 220.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 219.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|86441 : 161.0) no description available & (gnl|cdd|36820 : 155.0) no description available & (reliability: 440.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00058016ctg001_8029-10226' '(at5g23450 : 239.0) Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine.; long-chain base (LCB) kinase 1 (LCBK1); FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, sphingolipid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1); Has 1850 Blast hits to 1642 proteins in 445 species: Archae - 2; Bacteria - 669; Metazoa - 552; Fungi - 144; Plants - 247; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36332 : 98.5) no description available & (reliability: 478.0) & (original description: Putative LCBK1, Description = Sphingoid long-chain bases kinase 1, PFAM = )' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf00120_183258-187804' '(at4g04930 : 526.0) Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.; DES-1-LIKE; FUNCTIONS IN: oxidoreductase activity, sphingolipid delta-4 desaturase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sphingolipid delta4-desaturase, N-terminal (InterPro:IPR013866), Fatty acid desaturase, type 1 (InterPro:IPR005804), Sphingolipid delta4-desaturase (InterPro:IPR011388); Has 703 Blast hits to 697 proteins in 257 species: Archae - 0; Bacteria - 174; Metazoa - 227; Fungi - 120; Plants - 36; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38198 : 478.0) no description available & (gnl|cdd|58174 : 440.0) no description available & (reliability: 1052.0) & (original description: Putative des1, Description = Sphingolipid delta(4)-desaturase DES1, PFAM = PF08557;PF00487)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf00494_425091-431232' '(at4g36480 : 688.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36572 : 557.0) no description available & (gnl|cdd|30505 : 304.0) no description available & (reliability: 1376.0) & (original description: Putative LCB1, Description = Long chain base biosynthesis protein 1, PFAM = PF00155)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01171_527997-532057' '(at4g22330 : 407.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 223.0) no description available & (gnl|cdd|37540 : 195.0) no description available & (reliability: 814.0) & (original description: Putative AtCES1, Description = Acyl-CoA independent ceramide synthase, PFAM = PF05875)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01235_14337-30408' '(at4g36480 : 677.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36572 : 543.0) no description available & (gnl|cdd|30505 : 294.0) no description available & (reliability: 1354.0) & (original description: Putative LCB1, Description = Long chain base biosynthesis protein 1, PFAM = PF00155)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01655_531342-535332' '(at2g46210 : 645.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 396.0) no description available & (gnl|cdd|58172 : 178.0) no description available & (reliability: 1290.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01661_217039-221868' '(at1g13580 : 262.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 255.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 225.0) no description available & (gnl|cdd|86441 : 216.0) no description available & (reliability: 524.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01942_129062-136863' '(gnl|cdd|36092 : 322.0) no description available & (at1g69640 : 311.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|32818 : 99.8) no description available & (reliability: 622.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01950_354905-364811' '(at1g27980 : 787.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 764.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 494.0) no description available & (gnl|cdd|30425 : 250.0) no description available & (reliability: 1574.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01998_1015573-1019017' '(at2g46210 : 655.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 390.0) no description available & (gnl|cdd|58172 : 191.0) no description available & (reliability: 1310.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02090_740582-746264' '(gnl|cdd|36092 : 325.0) no description available & (at1g69640 : 322.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|32818 : 101.0) no description available & (reliability: 644.0) & (original description: Putative SC4H, Description = Sphingolipid C4 hydroxylase, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02240_62879-69907' '(at4g04930 : 517.0) Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.; DES-1-LIKE; FUNCTIONS IN: oxidoreductase activity, sphingolipid delta-4 desaturase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sphingolipid delta4-desaturase, N-terminal (InterPro:IPR013866), Fatty acid desaturase, type 1 (InterPro:IPR005804), Sphingolipid delta4-desaturase (InterPro:IPR011388); Has 703 Blast hits to 697 proteins in 257 species: Archae - 0; Bacteria - 174; Metazoa - 227; Fungi - 120; Plants - 36; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38198 : 470.0) no description available & (gnl|cdd|58174 : 431.0) no description available & (reliability: 1034.0) & (original description: Putative des1, Description = Sphingolipid delta(4)-desaturase DES1, PFAM = PF00487;PF08557)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02408_88679-99178' '(at3g19260 : 334.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 298.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 229.0) no description available & (gnl|cdd|86441 : 203.0) no description available & (reliability: 668.0) & (original description: Putative LAG2, Description = LAG1 longevity assurance homolog 2, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf03937_268677-271504' '(at3g06470 : 278.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 157.0) no description available & (gnl|cdd|85273 : 111.0) no description available & (reliability: 556.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04422_13607-20374' '(at3g58490 : 518.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 309.0) no description available & (gnl|cdd|48092 : 149.0) no description available & (reliability: 1036.0) & (original description: Putative LPPD, Description = Lipid phosphate phosphatase delta, PFAM = PF01569)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04430_366925-373317' '(at1g13580 : 399.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 375.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 246.0) no description available & (gnl|cdd|86441 : 213.0) no description available & (reliability: 798.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04800_300484-303419' '(at4g36830 : 247.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 142.0) no description available & (reliability: 482.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04871_2441653-2444969' '(at2g46210 : 646.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 398.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1292.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05140_3994-29535' '(at3g19260 : 306.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 287.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 212.0) no description available & (gnl|cdd|86441 : 190.0) no description available & (reliability: 612.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05143_80908-93434' '(at4g21540 : 538.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 259.0) no description available & (gnl|cdd|31785 : 116.0) no description available & (reliability: 1076.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05399_13607-27455' '(at1g27980 : 828.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 784.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 516.0) no description available & (gnl|cdd|30425 : 254.0) no description available & (reliability: 1656.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05711_42787-49187' '(at3g58490 : 545.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 311.0) no description available & (gnl|cdd|48092 : 156.0) no description available & (reliability: 1090.0) & (original description: Putative LPPD, Description = Phosphatidic acid phosphatase family protein, PFAM = PF01569)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05989_289-6713' '(q6eun0|ascl1_orysa : 192.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 190.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 105.0) no description available & (gnl|cdd|86441 : 82.6) no description available & (reliability: 380.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf06410_1019-6098' '(at2g46210 : 658.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 397.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1316.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf06545_459035-465101' '(at1g69640 : 399.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 377.0) no description available & (gnl|cdd|32818 : 104.0) no description available & (reliability: 798.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07003_29902-32753' '(at3g06470 : 173.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 147.0) no description available & (gnl|cdd|85273 : 112.0) no description available & (reliability: 346.0) & (original description: Putative KCS, Description = GNS1/SUR4 membrane family protein, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07058_244609-250518' '(at1g14290 : 367.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 2 (SBH2); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 1 (TAIR:AT1G69640.1); Has 2314 Blast hits to 2272 proteins in 379 species: Archae - 0; Bacteria - 367; Metazoa - 413; Fungi - 680; Plants - 393; Viruses - 3; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36092 : 365.0) no description available & (gnl|cdd|32818 : 101.0) no description available & (reliability: 734.0) & (original description: Putative sur2, Description = Sphingoid base hydroxylase 2, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07069_70775-83765' '(at4g21540 : 588.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 291.0) no description available & (gnl|cdd|31785 : 130.0) no description available & (reliability: 1176.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf08478_292461-298994' '(at4g22330 : 399.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 211.0) no description available & (gnl|cdd|37540 : 186.0) no description available & (reliability: 798.0) & (original description: Putative AtCES1, Description = Acyl-CoA independent ceramide synthase, PFAM = PF05875)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf11399_34138-38633' '(at3g06060 : 207.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 171.0) no description available & (reliability: 414.0) & (original description: Putative KDSR, Description = 3-ketodihydrosphingosine reductase, PFAM = PF00106)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf11399_34947-40225' '(at3g06060 : 417.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 321.0) no description available & (gnl|cdd|30648 : 160.0) no description available & (reliability: 834.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf12177_9611-12477' '(at1g75000 : 312.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT4G36830.1); Has 217 Blast hits to 217 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 53; Plants - 70; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38281 : 163.0) no description available & (reliability: 624.0) & (original description: Putative BnaC06g35790D, Description = BnaC06g35790D protein, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf12369_138806-141675' '(at4g36830 : 318.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 158.0) no description available & (reliability: 588.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf13263_11972-16898' '(at1g69640 : 370.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 366.0) no description available & (gnl|cdd|32818 : 101.0) no description available & (reliability: 740.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf15049_129608-139577' '(at5g23450 : 899.0) Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine.; long-chain base (LCB) kinase 1 (LCBK1); FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, sphingolipid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1); Has 1850 Blast hits to 1642 proteins in 445 species: Archae - 2; Bacteria - 669; Metazoa - 552; Fungi - 144; Plants - 247; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36332 : 305.0) no description available & (gnl|cdd|31785 : 113.0) no description available & (reliability: 1798.0) & (original description: Putative LCBK1, Description = Sphingoid long-chain bases kinase 1, PFAM = PF00781)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf15349_83408-86265' '(at3g06470 : 249.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 158.0) no description available & (gnl|cdd|85273 : 98.9) no description available & (reliability: 498.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T
'11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf17422_116471-130991' '(at1g13580 : 426.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 390.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 245.0) no description available & (gnl|cdd|86441 : 206.0) no description available & (reliability: 852.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T
'11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'nbv0.3scaffold10782_1427-17474' '(gnl|cdd|37443 : 1162.0) no description available & (at1g07380 : 1156.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|68312 : 1001.0) no description available & (reliability: 2312.0) & (original description: Putative asah2, Description = Neutral ceramidase C, PFAM = PF04734;PF17048)' T
'11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'nbv0.3scaffold27267_3056-21928' '(gnl|cdd|37443 : 890.0) no description available & (gnl|cdd|68312 : 840.0) no description available & (at2g38010 : 822.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1644.0) & (original description: Putative asah2, Description = Neutral ceramidase, PFAM = PF04734;PF17048)' T
'11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'niben101scf02665_467347-485230' '(at1g07380 : 1185.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|37443 : 1163.0) no description available & (gnl|cdd|68312 : 975.0) no description available & (reliability: 2370.0) & (original description: Putative dcd2A, Description = Neutral/alkaline nonlysosomal ceramidase family protein, PFAM = PF17048;PF04734)' T
'11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'niben101scf05385_382151-402718' '(gnl|cdd|37443 : 884.0) no description available & (gnl|cdd|68312 : 834.0) no description available & (at2g38010 : 827.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1654.0) & (original description: Putative asah2, Description = Neutral ceramidase C, PFAM = PF17048;PF04734)' T
'11.8.1.2' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase' 'niben044scf00014917ctg002_9501-15950' '(at5g23670 : 918.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (gnl|cdd|36571 : 779.0) no description available & (gnl|cdd|30505 : 340.0) no description available & (reliability: 1836.0) & (original description: Putative spt, Description = Serine palmitoyltransferase, PFAM = PF00155)' T
'11.8.1.2' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase' 'niben101scf08137_406422-413236' '(at5g23670 : 922.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (gnl|cdd|36571 : 780.0) no description available & (gnl|cdd|30505 : 342.0) no description available & (reliability: 1844.0) & (original description: Putative spt, Description = Serine palmitoyltransferase, PFAM = PF00155)' T
'11.8.1.3' 'lipid metabolism.''exotics'' (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase' 'nbv0.3scaffold16714_26757-37624' '(at2g19880 : 862.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: ceramide glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173). & (gnl|cdd|37758 : 312.0) no description available & (reliability: 1724.0) & (original description: Putative GT21A1, Description = Ceramide beta-glucosyltransferase, PFAM = PF13506)' T
'11.8.1.3' 'lipid metabolism.''exotics'' (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase' 'niben101scf06509_362137-374080' '(at2g19880 : 786.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: ceramide glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173). & (gnl|cdd|37758 : 252.0) no description available & (reliability: 1572.0) & (original description: Putative GT21A1, Description = Ceramide beta-glucosyltransferase, PFAM = PF13506)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'nbv0.5scaffold1124_236229-242260' '(at2g29390 : 357.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 242.0) no description available & (reliability: 714.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben044scf00023249ctg002_208-3188' '(at2g29390 : 391.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 265.0) no description available & (gnl|cdd|32818 : 88.6) no description available & (reliability: 782.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf01655_63715-66612' '(gnl|cdd|36529 : 127.0) no description available & (at4g00840 : 119.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|34870 : 99.7) no description available & (reliability: 224.0) & (original description: Putative REAM, Description = S-acyltransferase, PFAM = PF01529)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf02569_489352-495626' '(at4g12110 : 409.0) Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.; sterol-4alpha-methyl oxidase 1-1 (SMO1-1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol C4-methyl oxidase 1-2 (TAIR:AT4G22756.1); Has 2081 Blast hits to 2076 proteins in 340 species: Archae - 0; Bacteria - 283; Metazoa - 426; Fungi - 681; Plants - 428; Viruses - 3; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36091 : 287.0) no description available & (gnl|cdd|32818 : 97.9) no description available & (reliability: 818.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05278_34832-43024' '(at2g29390 : 436.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 301.0) no description available & (gnl|cdd|32818 : 94.8) no description available & (reliability: 872.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05372_191239-199534' '(at1g07420 : 456.0) Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA; sterol 4-alpha-methyl-oxidase 2-1 (SMO2-1); FUNCTIONS IN: C-4 methylsterol oxidase activity, 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-2 (TAIR:AT2G29390.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36091 : 299.0) no description available & (gnl|cdd|32818 : 94.0) no description available & (reliability: 912.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05811_634934-642173' '(at2g29390 : 429.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 296.0) no description available & (gnl|cdd|32818 : 95.6) no description available & (reliability: 858.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf09516_167222-172498' '(at4g12110 : 390.0) Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.; sterol-4alpha-methyl oxidase 1-1 (SMO1-1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol C4-methyl oxidase 1-2 (TAIR:AT4G22756.1); Has 2081 Blast hits to 2076 proteins in 340 species: Archae - 0; Bacteria - 283; Metazoa - 426; Fungi - 681; Plants - 428; Viruses - 3; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36091 : 266.0) no description available & (gnl|cdd|32818 : 91.3) no description available & (reliability: 780.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.3scaffold4907_1-9627' '(at1g43620 : 332.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|86220 : 116.0) no description available & (reliability: 664.0) & (original description: Putative gstA, Description = Sterol glucosyltransferase, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.3scaffold53173_5351-14056' '(at3g07020 : 547.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|86220 : 119.0) no description available & (reliability: 1094.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.5scaffold58_1035344-1056456' '(at3g07020 : 808.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 153.0) no description available & (gnl|cdd|36406 : 90.0) no description available & (reliability: 1616.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf00177_1092556-1112740' '(at3g07020 : 773.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 158.0) no description available & (gnl|cdd|36406 : 93.8) no description available & (reliability: 1546.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033;PF00201)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf01862_209129-268152' '(at1g43620 : 820.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|32004 : 174.0) no description available & (gnl|cdd|36406 : 95.0) no description available & (reliability: 1640.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF00201;PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf03185_60511-81014' '(at3g07020 : 813.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 163.0) no description available & (gnl|cdd|36406 : 93.1) no description available & (reliability: 1626.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf03954_38097-58244' '(at1g43620 : 826.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|32004 : 176.0) no description available & (gnl|cdd|36406 : 93.8) no description available & (reliability: 1652.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033;PF00201)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf04206_109543-132833' '(at3g07020 : 819.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 155.0) no description available & (gnl|cdd|36406 : 95.0) no description available & (reliability: 1638.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf04206_109643-133250' '(at3g07020 : 785.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 151.0) no description available & (gnl|cdd|36406 : 92.7) no description available & (reliability: 1570.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T
'11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf05316_346793-365801' '(at3g07020 : 761.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 151.0) no description available & (gnl|cdd|36406 : 88.8) no description available & (reliability: 1522.0) & (original description: Putative SgtL3, Description = Putative sterol glucosyltransferase, PFAM = PF00201;PF03033)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'nbv0.3scaffold435_113663-131197' '(at2g26260 : 740.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 357.0) no description available & (gnl|cdd|85225 : 260.0) no description available & (reliability: 1480.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'nbv0.3scaffold4512_4852-14571' '(at2g43420 : 431.0) 3-beta hydroxysteroid dehydrogenase/isomerase family protein; FUNCTIONS IN: binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (TAIR:AT2G26260.1); Has 10307 Blast hits to 10296 proteins in 2122 species: Archae - 301; Bacteria - 6803; Metazoa - 545; Fungi - 280; Plants - 752; Viruses - 81; Other Eukaryotes - 1545 (source: NCBI BLink). & (gnl|cdd|36643 : 238.0) no description available & (gnl|cdd|85225 : 209.0) no description available & (reliability: 862.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF02453;PF01073;PF01073)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf01323_284652-306308' '(at2g26260 : 793.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 371.0) no description available & (gnl|cdd|85225 : 264.0) no description available & (reliability: 1586.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF02453;PF01073)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf03375_109721-122317' '(at2g43420 : 454.0) 3-beta hydroxysteroid dehydrogenase/isomerase family protein; FUNCTIONS IN: binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (TAIR:AT2G26260.1); Has 10307 Blast hits to 10296 proteins in 2122 species: Archae - 301; Bacteria - 6803; Metazoa - 545; Fungi - 280; Plants - 752; Viruses - 81; Other Eukaryotes - 1545 (source: NCBI BLink). & (gnl|cdd|36643 : 258.0) no description available & (gnl|cdd|85225 : 227.0) no description available & (reliability: 908.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf03424_159335-164772' '(at2g33630 : 726.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 15942 Blast hits to 15941 proteins in 2471 species: Archae - 466; Bacteria - 10729; Metazoa - 579; Fungi - 380; Plants - 472; Viruses - 127; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|36643 : 308.0) no description available & (gnl|cdd|85225 : 289.0) no description available & (reliability: 1452.0) & (original description: Putative sdr42e1, Description = Short-chain dehydrogenase/reductase family 42E member 1, PFAM = PF01073;PF14934)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf04940_12174-22361' '(at2g26260 : 619.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 367.0) no description available & (gnl|cdd|85225 : 260.0) no description available & (reliability: 1238.0) & (original description: Putative c4acd, Description = Sterol decarboxylase, PFAM = PF01073)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf07652_197016-218766' '(at2g26260 : 786.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 363.0) no description available & (gnl|cdd|85225 : 262.0) no description available & (reliability: 1572.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T
'11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf18660_93550-98929' '(at2g33630 : 711.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 15942 Blast hits to 15941 proteins in 2471 species: Archae - 466; Bacteria - 10729; Metazoa - 579; Fungi - 380; Plants - 472; Viruses - 127; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|36643 : 303.0) no description available & (gnl|cdd|85225 : 290.0) no description available & (reliability: 1422.0) & (original description: Putative sdr42e1, Description = Short-chain dehydrogenase/reductase family 42E member 1, PFAM = PF14934;PF01073)' T
'11.8.5' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene monooxygenase' '' ''
'11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1994.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T
'11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2228.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T
'11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1224.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T
'11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 316.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T
'11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf16532_80911-109776' '(at2g07050 : 1298.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 1194.0) no description available & (gnl|cdd|29791 : 878.0) no description available & (reliability: 2596.0) & (original description: Putative bAS1, Description = Terpene cyclase/mutase family member, PFAM = PF13243;PF13249)' T
'11.8.7' 'lipid metabolism.'exotics' (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)' 'niben044scf00030141ctg001_2227-5886' '(at3g55360 : 466.0) Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.; ECERIFERUM 10 (CER10); FUNCTIONS IN: fatty acid elongase activity, trans-2-enoyl-CoA reductase (NADPH) activity, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: sphingolipid metabolic process, wax biosynthetic process; LOCATED IN: endoplasmic reticulum, fatty acid elongase complex, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1087 Blast hits to 1087 proteins in 269 species: Archae - 0; Bacteria - 73; Metazoa - 353; Fungi - 144; Plants - 184; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|36852 : 304.0) no description available & (gnl|cdd|66254 : 93.0) no description available & (reliability: 932.0) & (original description: Putative ECR, Description = Very-long-chain enoyl-CoA reductase, PFAM = PF02544)' T
'11.8.7' 'lipid metabolism.'exotics' (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)' 'niben101scf02008_9649-21034' '(at3g55360 : 527.0) Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.; ECERIFERUM 10 (CER10); FUNCTIONS IN: fatty acid elongase activity, trans-2-enoyl-CoA reductase (NADPH) activity, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: sphingolipid metabolic process, wax biosynthetic process; LOCATED IN: endoplasmic reticulum, fatty acid elongase complex, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1087 Blast hits to 1087 proteins in 269 species: Archae - 0; Bacteria - 73; Metazoa - 353; Fungi - 144; Plants - 184; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|36852 : 341.0) no description available & (gnl|cdd|66254 : 98.0) no description available & (reliability: 1054.0) & (original description: Putative ECR, Description = Very-long-chain enoyl-CoA reductase, PFAM = PF02544)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'nbv0.3scaffold53871_3049-12099' '(at4g34640 : 644.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 497.0) no description available & (gnl|cdd|64362 : 315.0) no description available & (reliability: 1288.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'nbv0.5scaffold5195_4110-50945' '(at4g34650 : 457.0) Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function.; squalene synthase 2 (SQS2); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 1 (TAIR:AT4G34640.1); Has 1176 Blast hits to 1175 proteins in 496 species: Archae - 34; Bacteria - 579; Metazoa - 114; Fungi - 168; Plants - 163; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36672 : 378.0) no description available & (gnl|cdd|64362 : 239.0) no description available & (reliability: 914.0) & (original description: Putative TSS, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben044scf00023480ctg004_1-8076' '(at4g34640 : 531.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 396.0) no description available & (gnl|cdd|64362 : 223.0) no description available & (reliability: 1062.0) & (original description: Putative fdfT, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben044scf00050609ctg001_726-6400' '(at4g34640 : 472.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 384.0) no description available & (gnl|cdd|64362 : 227.0) no description available & (reliability: 944.0) & (original description: Putative sqs, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf01025_36586-45286' '(at4g34640 : 635.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 492.0) no description available & (gnl|cdd|64362 : 299.0) no description available & (reliability: 1270.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf01253_19167-37145' '(at4g34650 : 550.0) Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function.; squalene synthase 2 (SQS2); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 1 (TAIR:AT4G34640.1); Has 1176 Blast hits to 1175 proteins in 496 species: Archae - 34; Bacteria - 579; Metazoa - 114; Fungi - 168; Plants - 163; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36672 : 437.0) no description available & (gnl|cdd|64362 : 248.0) no description available & (reliability: 1100.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf04664_253943-263747' '(at4g34640 : 648.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 502.0) no description available & (gnl|cdd|64362 : 321.0) no description available & (reliability: 1296.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf06023_264124-282712' '(at4g34640 : 554.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 441.0) no description available & (gnl|cdd|64362 : 271.0) no description available & (reliability: 1108.0) & (original description: Putative sqs, Description = Squalene synthase, PFAM = PF00494)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'nbv0.3scaffold43831_5080-12029' '(at3g44830 : 869.0) Lecithin:cholesterol acyltransferase family protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 743 Blast hits to 672 proteins in 235 species: Archae - 0; Bacteria - 21; Metazoa - 207; Fungi - 173; Plants - 213; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37580 : 282.0) no description available & (gnl|cdd|66167 : 124.0) no description available & (reliability: 1738.0) & (original description: Putative PDAT2, Description = Putative phospholipid:diacylglycerol acyltransferase 2, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'nbv0.3scaffold45516_5135-15290' '(at5g13640 : 1042.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 303.0) no description available & (gnl|cdd|66167 : 118.0) no description available & (reliability: 2084.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf00736_153449-161258' '(at5g13640 : 1052.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 310.0) no description available & (gnl|cdd|66167 : 128.0) no description available & (reliability: 2104.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf00870_1459946-1466094' '(at5g13640 : 1003.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 299.0) no description available & (gnl|cdd|66167 : 121.0) no description available & (reliability: 2006.0) & (original description: Putative pdat2, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450;PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf02174_135893-144023' '(at4g19860 : 725.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: lecithin:cholesterol acyltransferase 3 (TAIR:AT3G03310.1); Has 596 Blast hits to 589 proteins in 168 species: Archae - 2; Bacteria - 89; Metazoa - 166; Fungi - 41; Plants - 181; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|37580 : 219.0) no description available & (gnl|cdd|66167 : 91.6) no description available & (reliability: 1450.0) & (original description: Putative LCAT4, Description = Lecithin-cholesterol acyltransferase-like 4, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf02425_155756-164016' '(at5g13640 : 1057.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 311.0) no description available & (gnl|cdd|66167 : 129.0) no description available & (reliability: 2114.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450;PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf03973_45373-50886' '(at3g44830 : 914.0) Lecithin:cholesterol acyltransferase family protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 743 Blast hits to 672 proteins in 235 species: Archae - 0; Bacteria - 21; Metazoa - 207; Fungi - 173; Plants - 213; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37580 : 301.0) no description available & (gnl|cdd|66167 : 133.0) no description available & (reliability: 1828.0) & (original description: Putative PDAT2, Description = Putative phospholipid:diacylglycerol acyltransferase 2, PFAM = PF02450;PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf04691_37427-51891' '(at3g03310 : 610.0) lecithin:cholesterol acyltransferase 3 (LCAT3); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G19860.1); Has 560 Blast hits to 555 proteins in 155 species: Archae - 2; Bacteria - 82; Metazoa - 189; Fungi - 22; Plants - 147; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|37580 : 245.0) no description available & (gnl|cdd|66167 : 87.0) no description available & (reliability: 1220.0) & (original description: Putative LCAT3, Description = Phospholipase A(1) LCAT3, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf07797_394576-398838' '(at1g27480 : 511.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|37580 : 250.0) no description available & (gnl|cdd|66167 : 165.0) no description available & (reliability: 1022.0) & (original description: Putative LCAT1, Description = Lecithin-cholesterol acyltransferase-like 1, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf08738_29589-38732' '(at5g13640 : 1052.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 305.0) no description available & (gnl|cdd|66167 : 120.0) no description available & (reliability: 2104.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T
'11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf13185_266233-296385' '(at1g04010 : 1043.0) phospholipid sterol acyl transferase 1 (PSAT1); CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 615 Blast hits to 606 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 241; Fungi - 118; Plants - 150; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|66167 : 288.0) no description available & (gnl|cdd|37580 : 278.0) no description available & (reliability: 2086.0) & (original description: Putative PSAT, Description = Phospholipid--sterol O-acyltransferase, PFAM = PF02450)' T
'11.8.1001' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmasterol' 'secondary metabolism, steroids' M
'11.8.1002' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmastanol' 'secondary metabolism, steroids' M
'11.8.1003' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmasterol acetate' 'secondary metabolism, steroids' M
'11.8.1004' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmastadienone' 'secondary metabolism, steroids' M
'11.8.1005' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'lanosterol' 'secondary metabolism, steroids' M
'11.8.1006' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'ergosterol' 'secondary metabolism, steroids' M
'11.8.1007' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'cholesteryl oleate' 'secondary metabolism, steroids' M
'11.8.1008' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'oleanolate' 'secondary metabolism, steroids' M
'11.8.1009' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'ursolate' 'secondary metabolism, steroids' M
'11.8.1010' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'cholesterol' 'secondary metabolism, steroids' M
'11.8.1011' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'fucosterol' 'secondary metabolism, steroids' M
'11.8.1012' 'lipid metabolism.'exotics' (steroids, squalene etc)' '5-alpha-cholestane' 'secondary metabolism, steroids' M
'11.8.1013' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'digoxin' 'secondary metabolism; from Digitalis (foxglove plant)' M
'11.9' 'lipid metabolism.lipid degradation' 'niben044scf00004782ctg003_19002-23283' '(at4g28570 : 801.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT1G03990.1); Has 3734 Blast hits to 3404 proteins in 773 species: Archae - 46; Bacteria - 2451; Metazoa - 41; Fungi - 246; Plants - 166; Viruses - 0; Other Eukaryotes - 784 (source: NCBI BLink). & (gnl|cdd|84990 : 245.0) no description available & (reliability: 1476.0) & (original description: Putative FAO2, Description = Long-chain-alcohol oxidase FAO2, PFAM = PF00732;PF05199)' T
'11.9' 'lipid metabolism.lipid degradation' 'niben101scf00367_368008-374044' '(at3g23410 : 804.0) Encodes a fatty alcohol oxidase.; fatty alcohol oxidase 3 (FAO3); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3017 Blast hits to 2907 proteins in 684 species: Archae - 34; Bacteria - 1847; Metazoa - 52; Fungi - 221; Plants - 173; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink). & (gnl|cdd|84990 : 263.0) no description available & (reliability: 1608.0) & (original description: Putative FAO1, Description = Long-chain-alcohol oxidase FAO1, PFAM = PF00732;PF05199)' T
'11.9' 'lipid metabolism.lipid degradation' 'niben101scf13185_79139-83888' '(at4g28570 : 810.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT1G03990.1); Has 3734 Blast hits to 3404 proteins in 773 species: Archae - 46; Bacteria - 2451; Metazoa - 41; Fungi - 246; Plants - 166; Viruses - 0; Other Eukaryotes - 784 (source: NCBI BLink). & (gnl|cdd|84990 : 250.0) no description available & (reliability: 1490.0) & (original description: Putative FAO2, Description = Long-chain-alcohol oxidase FAO2, PFAM = PF00732;PF05199)' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'nbv0.5scaffold1425_392168-453839' '(at3g60340 : 449.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 394.0) no description available & (gnl|cdd|65841 : 149.0) no description available & (reliability: 898.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089;PF02089)' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben044scf00014327ctg007_1-2998' '(at3g60340 : 111.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 105.0) no description available & (reliability: 222.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = )' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf00863_495028-500121' '(at3g60340 : 328.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 323.0) no description available & (gnl|cdd|65841 : 129.0) no description available & (reliability: 656.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089)' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf01123_13610-19098' '(at3g60340 : 346.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 334.0) no description available & (gnl|cdd|65841 : 139.0) no description available & (reliability: 692.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089)' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf05028_145170-156727' '(gnl|cdd|37752 : 336.0) no description available & (at3g60340 : 335.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|65841 : 145.0) no description available & (reliability: 670.0) & (original description: Putative BnaAnng23510D, Description = BnaAnng23510D protein, PFAM = PF02089)' T
'11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf05855_177788-184166' '(at3g60340 : 413.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 381.0) no description available & (gnl|cdd|65841 : 162.0) no description available & (reliability: 826.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase, PFAM = PF02089)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold6618_8190-21065' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 314.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 652.0) & (original description: Putative At1g28570, Description = GDSL esterase/lipase At1g28570, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold6618_10469-21098' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 313.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 652.0) & (original description: Putative BnaA07g08280D, Description = BnaA07g08280D protein, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold7193_2698-13472' '(at1g73920 : 874.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 302.0) no description available & (reliability: 1748.0) & (original description: Putative LIPG1, Description = Carboxylic ester hydrolase/lipase, PFAM = PF04083)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold31408_631-6430' '(at2g39420 : 439.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 427.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 830.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold36784_2903-11850' '(at5g18640 : 450.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 168.0) no description available & (reliability: 900.0) & (original description: Putative lipase, Description = Lipase, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold1631_419490-422590' '(gnl|cdd|58514 : 271.0) no description available & (at1g28590 : 267.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 500.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold3790_134364-137416' '(gnl|cdd|58514 : 162.0) no description available & (at1g28650 : 159.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold6004_78313-94287' '(gnl|cdd|58514 : 279.0) no description available & (at5g03980 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 504.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold6617_29570-32691' '(gnl|cdd|58514 : 169.0) no description available & (at1g28670 : 162.0) Arabidopsis thaliana lipase; ARAB-1; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28660.1); Has 3359 Blast hits to 3311 proteins in 183 species: Archae - 0; Bacteria - 261; Metazoa - 0; Fungi - 0; Plants - 3095; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 80.1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 324.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00005803ctg004_2570-6254' '(at2g42690 : 488.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G18550.1); Has 772 Blast hits to 765 proteins in 118 species: Archae - 0; Bacteria - 26; Metazoa - 4; Fungi - 158; Plants - 461; Viruses - 1; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|39769 : 113.0) no description available & (gnl|cdd|85661 : 93.8) no description available & (reliability: 976.0) & (original description: Putative At2g42690, Description = Phospholipase A1-IIdelta, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00007218ctg001_3333-6309' '(at1g28650 : 161.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 161.0) no description available & (reliability: 322.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00007970ctg007_1447-12982' '(at2g44970 : 620.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative At2g44970, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00012848ctg003_9214-18232' '(at5g18630 : 394.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2101 Blast hits to 2100 proteins in 395 species: Archae - 0; Bacteria - 476; Metazoa - 111; Fungi - 453; Plants - 678; Viruses - 12; Other Eukaryotes - 371 (source: NCBI BLink). & (gnl|cdd|39769 : 162.0) no description available & (gnl|cdd|73213 : 140.0) no description available & (reliability: 788.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf00416_571369-574493' '(at5g03980 : 296.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 288.0) no description available & (q7y1x1|est_hevbr : 162.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 534.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf00449_74326-84641' '(at2g39420 : 397.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 391.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 750.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01228_173307-183445' '(at1g28570 : 199.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (q7y1x1|est_hevbr : 89.4) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 360.0) & (original description: Putative pco061737, Description = GDSL esterase/lipase At5g45910 family, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01438_65896-69017' '(gnl|cdd|58514 : 293.0) no description available & (at1g28570 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 498.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01670_224245-245923' '(gnl|cdd|58514 : 267.0) no description available & (at5g03980 : 258.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 141.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 470.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01681_351124-354254' '(gnl|cdd|58514 : 270.0) no description available & (at1g28640 : 269.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 135.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 518.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02406_84429-87626' '(gnl|cdd|58514 : 162.0) no description available & (at5g03980 : 150.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02408_203674-206798' '(gnl|cdd|58514 : 169.0) no description available & (at1g28650 : 164.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 86.7) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 328.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02752_404909-422275' '(at5g18640 : 462.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 190.0) no description available & (gnl|cdd|73213 : 171.0) no description available & (reliability: 924.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02752_405204-421771' '(at5g18630 : 449.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2101 Blast hits to 2100 proteins in 395 species: Archae - 0; Bacteria - 476; Metazoa - 111; Fungi - 453; Plants - 678; Viruses - 12; Other Eukaryotes - 371 (source: NCBI BLink). & (gnl|cdd|39769 : 188.0) no description available & (gnl|cdd|73213 : 170.0) no description available & (reliability: 898.0) & (original description: Putative lipase, Description = Lipase, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02869_1239223-1250296' '(at1g28580 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 300.0) no description available & (q7y1x1|est_hevbr : 125.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 548.0) & (original description: Putative Os05g0209600, Description = Os05g0209600 protein, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03023_415758-423810' '(at1g28590 : 386.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 708.0) & (original description: Putative At1g28600, Description = GDSL esterase/lipase At1g28600, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03300_575441-578687' '(at5g03980 : 162.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 162.0) no description available & (q7y1x1|est_hevbr : 83.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 318.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03497_970503-973630' '(gnl|cdd|58514 : 279.0) no description available & (at1g28640 : 260.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 508.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03497_1024418-1027548' '(gnl|cdd|58514 : 289.0) no description available & (at1g28570 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 498.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf04820_131478-136108' '(at1g52760 : 534.0) Encodes a lysophospholipase 2 (LysoPL2). Involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).; lysophospholipase 2 (LysoPL2); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G11090.1); Has 2373 Blast hits to 2373 proteins in 808 species: Archae - 32; Bacteria - 1418; Metazoa - 106; Fungi - 99; Plants - 433; Viruses - 39; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|36668 : 361.0) no description available & (gnl|cdd|32448 : 122.0) no description available & (reliability: 1068.0) & (original description: Putative CSE, Description = Caffeoylshikimate esterase, PFAM = PF12146)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf05731_32930-36030' '(at1g28590 : 285.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 278.0) no description available & (q7y1x1|est_hevbr : 160.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 518.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf06909_408549-411688' '(at1g28590 : 289.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 284.0) no description available & (q7y1x1|est_hevbr : 167.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09150_209540-217359' '(at5g18640 : 467.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 175.0) no description available & (reliability: 934.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09559_21765-25243' '(at2g42690 : 493.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G18550.1); Has 772 Blast hits to 765 proteins in 118 species: Archae - 0; Bacteria - 26; Metazoa - 4; Fungi - 158; Plants - 461; Viruses - 1; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|39769 : 119.0) no description available & (gnl|cdd|85661 : 100.0) no description available & (reliability: 986.0) & (original description: Putative At2g42690, Description = Phospholipase A1-IIdelta, PFAM = PF01764)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09575_189933-202951' '(at2g44970 : 611.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 1222.0) & (original description: Putative At2g44970, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09751_155409-161953' '(at2g44970 : 479.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative TCM_037814, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf11009_189302-192414' '(gnl|cdd|58514 : 282.0) no description available & (at5g03980 : 254.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 490.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf12983_223795-226943' '(gnl|cdd|58514 : 156.0) no description available & (at1g28640 : 146.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf15077_6787-9356' '(at1g52760 : 296.0) Encodes a lysophospholipase 2 (LysoPL2). Involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).; lysophospholipase 2 (LysoPL2); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G11090.1); Has 2373 Blast hits to 2373 proteins in 808 species: Archae - 32; Bacteria - 1418; Metazoa - 106; Fungi - 99; Plants - 433; Viruses - 39; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|36668 : 179.0) no description available & (reliability: 592.0) & (original description: Putative CSE, Description = Monoacylglycerol acyltransferase, PFAM = PF12146)' T
'11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf16660_237358-246057' '(at1g73920 : 863.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 288.0) no description available & (reliability: 1726.0) & (original description: Putative BnaA08g29390D, Description = BnaA08g29390D protein, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold5959_3271-20416' '(at4g13550 : 682.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 155.0) no description available & (gnl|cdd|39769 : 126.0) no description available & (reliability: 1364.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF01764;PF00168)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold6470_5820-12313' '(at3g07400 : 480.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); Has 393 Blast hits to 389 proteins in 69 species: Archae - 0; Bacteria - 12; Metazoa - 12; Fungi - 52; Plants - 275; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 960.0) & (original description: Putative At3g07400, Description = Lipase class 3 family protein, PFAM = )' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold7193_2698-13472' '(at1g73920 : 874.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 302.0) no description available & (reliability: 1730.0) & (original description: Putative LIPG1, Description = Carboxylic ester hydrolase/lipase, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold8176_807-11999' '(at2g15230 : 441.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37835 : 241.0) no description available & (reliability: 882.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF00561)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold23715_16484-20073' '(at4g16820 : 570.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 142.0) no description available & (reliability: 1140.0) & (original description: Putative At4g16820, Description = Phospholipase A1-Ibeta2, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold30395_685-4283' '(at4g16820 : 521.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1042.0) & (original description: Putative Os02g0653900, Description = DAD-1, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold36436_8378-13978' '(at3g14360 : 562.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39769 : 112.0) no description available & (gnl|cdd|73213 : 102.0) no description available & (reliability: 1124.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold80052_1080-6193' '(at1g02660 : 582.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|73213 : 119.0) no description available & (reliability: 1164.0) & (original description: Putative At1g02660, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1034_80182-89277' '(at5g14180 : 516.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 333.0) no description available & (reliability: 1032.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF12146;PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1225_75387-79763' '(at5g42930 : 414.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 146.0) no description available & (gnl|cdd|39769 : 136.0) no description available & (reliability: 828.0) & (original description: Putative TAL3, Description = Triacylglycerol acidic lipase TAL3, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1312_186939-208783' '(at2g42450 : 565.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37299 : 159.0) no description available & (gnl|cdd|73213 : 125.0) no description available & (reliability: 1130.0) & (original description: Putative BnaC04g52720D, Description = BnaC04g52720D protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1846_373394-400611' '(at3g07400 : 1099.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); Has 393 Blast hits to 389 proteins in 69 species: Archae - 0; Bacteria - 12; Metazoa - 12; Fungi - 52; Plants - 275; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 2198.0) & (original description: Putative BnaC05g44540D, Description = BnaC05g44540D protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold2867_209408-212784' '(at1g05800 : 508.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 137.0) no description available & (reliability: 1016.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold6332_39940-45661' '(at1g56630 : 140.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1532 Blast hits to 1526 proteins in 353 species: Archae - 0; Bacteria - 521; Metazoa - 41; Fungi - 272; Plants - 392; Viruses - 3; Other Eukaryotes - 303 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative PGSC0003DMG400007965, Description = Alpha/beta-Hydrolases superfamily protein, putative, PFAM = )' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold8641_1-14858' '(at5g14180 : 351.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 257.0) no description available & (reliability: 702.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF00561)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00000414ctg019_2736-4644' '(at4g18550 : 240.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 109.0) no description available & (gnl|cdd|85661 : 92.7) no description available & (reliability: 480.0) & (original description: Putative EEF53, Description = EEF53 protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00003063ctg002_1761-8110' '(at5g42930 : 421.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 157.0) no description available & (gnl|cdd|39769 : 143.0) no description available & (reliability: 842.0) & (original description: Putative TAL3, Description = Triacylglycerol acidic lipase TAL3, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00005848ctg016_3261-8354' '(at1g02660 : 589.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|73213 : 118.0) no description available & (reliability: 1178.0) & (original description: Putative At1g02660, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00007194ctg009_1-3687' '(at2g30550 : 536.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 230.0) no description available & (gnl|cdd|73213 : 155.0) no description available & (reliability: 1072.0) & (original description: Putative Os05g0574000, Description = Phospholipase A1-II 6, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00018301ctg011_479-3614' '(at2g15230 : 172.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative LIP1, Description = Lipase, PFAM = )' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00024373ctg021_1-2024' '(at5g42930 : 156.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative TAL3, Description = Feruloyl esterase A, PFAM = )' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00035670ctg005_1-8289' '(at5g14180 : 429.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 339.0) no description available & (reliability: 858.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00167_379226-386837' '(at5g14180 : 516.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 330.0) no description available & (reliability: 1032.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083;PF12146)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00270_416452-433040' '(at1g05790 : 598.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G42450.1); Has 496 Blast hits to 490 proteins in 108 species: Archae - 0; Bacteria - 1; Metazoa - 175; Fungi - 34; Plants - 192; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37299 : 142.0) no description available & (gnl|cdd|73213 : 101.0) no description available & (reliability: 1196.0) & (original description: Putative BnaC08g01510D, Description = BnaC08g01510D protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00324_271522-284457' '(at4g10955 : 410.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 820.0) & (original description: Putative Os01g0719900, Description = Os01g0719900 protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00410_135992-142248' '(at4g10955 : 416.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 832.0) & (original description: Putative At4g10955, Description = GDSL esterase/lipase At4g10955, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00428_1167775-1171457' '(at4g16820 : 550.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 194.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1100.0) & (original description: Putative GLA1, Description = Glycerolipase A1, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01032_377941-381196' '(at1g56630 : 130.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1532 Blast hits to 1526 proteins in 353 species: Archae - 0; Bacteria - 521; Metazoa - 41; Fungi - 272; Plants - 392; Viruses - 3; Other Eukaryotes - 303 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400007965, Description = Alpha/beta-Hydrolases superfamily protein, putative, PFAM = )' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01076_640337-645630' '(at3g61680 : 553.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|73213 : 109.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC04g21650D, Description = BnaC04g21650D protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01228_226741-230546' '(at4g18550 : 473.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 200.0) no description available & (gnl|cdd|85661 : 139.0) no description available & (reliability: 946.0) & (original description: Putative DSEL, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01283_182734-188334' '(at3g14360 : 565.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39769 : 111.0) no description available & (gnl|cdd|73213 : 102.0) no description available & (reliability: 1130.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01350_36823-55509' '(at2g15230 : 433.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37835 : 242.0) no description available & (reliability: 866.0) & (original description: Putative LIP1, Description = Triacylglycerol lipase 1, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01553_299467-303843' '(at5g42930 : 301.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|39769 : 135.0) no description available & (gnl|cdd|73213 : 135.0) no description available & (reliability: 602.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01922_1076978-1091271' '(at4g13550 : 521.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 124.0) no description available & (gnl|cdd|39769 : 90.9) no description available & (reliability: 1042.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF00168;PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf02299_216224-219738' '(at1g30370 : 505.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1971 Blast hits to 1966 proteins in 378 species: Archae - 0; Bacteria - 534; Metazoa - 65; Fungi - 334; Plants - 717; Viruses - 10; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|39769 : 207.0) no description available & (gnl|cdd|73213 : 140.0) no description available & (reliability: 1010.0) & (original description: Putative DAD1, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf02469_166966-172054' '(at2g30550 : 627.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 253.0) no description available & (gnl|cdd|73213 : 154.0) no description available & (reliability: 1254.0) & (original description: Putative At2g30550, Description = Phospholipase A1-Igamma2, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03036_638118-641494' '(at1g05800 : 508.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 137.0) no description available & (reliability: 1016.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03309_425907-429929' '(at4g18550 : 442.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 190.0) no description available & (gnl|cdd|85661 : 127.0) no description available & (reliability: 884.0) & (original description: Putative DSEL, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03309_450307-453741' '(at4g18550 : 422.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 191.0) no description available & (gnl|cdd|73213 : 130.0) no description available & (reliability: 844.0) & (original description: Putative Os01g0651200, Description = Phospholipase A1-II 2, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03600_52107-61766' '(at5g14180 : 525.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 328.0) no description available & (reliability: 1050.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03766_233103-241104' '(at5g14180 : 491.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 310.0) no description available & (reliability: 982.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083;PF00561)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03952_15935-21453' '(at3g61680 : 554.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|85661 : 106.0) no description available & (reliability: 1108.0) & (original description: Putative BnaC04g21650D, Description = BnaC04g21650D protein, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf04007_746084-759725' '(at5g42930 : 502.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 143.0) no description available & (gnl|cdd|39769 : 134.0) no description available & (reliability: 1004.0) & (original description: Putative TAL5, Description = Triacylglycerol acidic lipase TAL5, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf04731_1660-25855' '(at5g14180 : 245.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 180.0) no description available & (reliability: 490.0) & (original description: Putative LIP2, Description = Lipase, PFAM = PF00561)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf05247_215042-218481' '(at1g05800 : 478.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 185.0) no description available & (gnl|cdd|73213 : 131.0) no description available & (reliability: 956.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf06027_214359-218323' '(at4g18550 : 247.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 129.0) no description available & (gnl|cdd|85661 : 128.0) no description available & (reliability: 494.0) & (original description: Putative PLA3, Description = Phospholipase A3, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf06261_335599-340783' '(at5g42930 : 464.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 144.0) no description available & (gnl|cdd|39769 : 137.0) no description available & (reliability: 928.0) & (original description: Putative TLL1, Description = At1g45200, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf07748_26768-30316' '(at2g30550 : 524.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 221.0) no description available & (gnl|cdd|73213 : 149.0) no description available & (reliability: 1048.0) & (original description: Putative At1g06800, Description = Phospholipase A1-Igamma1, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf07825_235864-239384' '(at1g51440 : 635.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.2); Has 1155 Blast hits to 1147 proteins in 234 species: Archae - 0; Bacteria - 238; Metazoa - 19; Fungi - 161; Plants - 563; Viruses - 5; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|39769 : 239.0) no description available & (gnl|cdd|73213 : 143.0) no description available & (reliability: 1270.0) & (original description: Putative Sb03g046400, Description = Putative uncharacterized protein Sb03g046400, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf08921_225334-229193' '(at4g18550 : 447.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 194.0) no description available & (gnl|cdd|73213 : 129.0) no description available & (reliability: 894.0) & (original description: Putative DSEL, Description = Phospholipase A1-IIgamma, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf09317_143242-146840' '(at4g16820 : 524.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1048.0) & (original description: Putative At4g16820, Description = Phospholipase A1-Ibeta2, chloroplastic, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf10353_55159-58669' '(at4g18550 : 441.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 196.0) no description available & (gnl|cdd|85661 : 129.0) no description available & (reliability: 882.0) & (original description: Putative Os01g0651800, Description = Phospholipase A1-II 3, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf10436_132849-138012' '(at3g14360 : 608.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|73213 : 143.0) no description available & (gnl|cdd|39769 : 136.0) no description available & (reliability: 1216.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11177_11231-14582' '(at5g24230 : 385.0) Lipase class 3-related protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Lipase class 3-related protein (TAIR:AT5G24220.1); Has 233 Blast hits to 232 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 10; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At4g10955, Description = GDSL esterase/lipase At4g10955, PFAM = PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11312_12373-19396' '(at3g14075 : 695.0) Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3; FUNCTIONS IN: triglyceride lipase activity, carboxylesterase activity; INVOLVED IN: lipid catabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT4G16070.1). & (gnl|cdd|37299 : 212.0) no description available & (gnl|cdd|73213 : 119.0) no description available & (reliability: 1390.0) & (original description: Putative BnaC01g37230D, Description = BnaC01g37230D protein, PFAM = PF01764;PF03893)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11646_166583-191538' '(at4g13550 : 694.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 155.0) no description available & (gnl|cdd|39769 : 128.0) no description available & (reliability: 1388.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF00168;PF01764)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf13005_239587-265391' '(at4g16070 : 686.0) Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3; FUNCTIONS IN: triglyceride lipase activity, carboxylesterase activity; INVOLVED IN: lipid catabolic process, lipid metabolic process; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2). & (gnl|cdd|37299 : 251.0) no description available & (gnl|cdd|73213 : 116.0) no description available & (reliability: 1372.0) & (original description: Putative dl4075c, Description = Putative uncharacterized protein AT4g16070, PFAM = PF01764;PF03893)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf16660_237358-246057' '(at1g73920 : 863.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 288.0) no description available & (reliability: 1696.0) & (original description: Putative BnaA08g29390D, Description = BnaA08g29390D protein, PFAM = PF04083)' T
'11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf21890_107525-111763' '(at2g30550 : 486.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 206.0) no description available & (gnl|cdd|73213 : 134.0) no description available & (reliability: 972.0) & (original description: Putative DAL6, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T
'11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'nbv0.3scaffold18163_52597-60083' '(at5g16120 : 497.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 389.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 994.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T
'11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'nbv0.3scaffold31408_631-6430' '(at2g39420 : 439.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 427.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 836.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T
'11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf00449_74326-84641' '(at2g39420 : 397.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 391.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 752.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T
'11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf00894_250157-257643' '(at5g16120 : 479.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 378.0) no description available & (gnl|cdd|32448 : 142.0) no description available & (reliability: 958.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T
'11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf01991_321255-328448' '(at5g16120 : 476.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 375.0) no description available & (gnl|cdd|32448 : 144.0) no description available & (reliability: 952.0) & (original description: Putative AY109678, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold9856_16037-47163' '(at1g31480 : 1056.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 380.0) no description available & (gnl|cdd|66529 : 130.0) no description available & (reliability: 2112.0) & (original description: Putative SGR2, Description = Phospholipase DDHD2, PFAM = PF02862)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold17047_4441-31264' '(at2g26870 : 752.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|67785 : 297.0) no description available & (reliability: 1504.0) & (original description: Putative NPC2, Description = Non-specific phospholipase C2, PFAM = PF04185)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold37005_284-20277' '(at3g18860 : 1061.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), PLAA family ubiquitin binding, PFU (InterPro:IPR015155), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), PUL (InterPro:IPR013535); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 46729 Blast hits to 23224 proteins in 745 species: Archae - 52; Bacteria - 6206; Metazoa - 17661; Fungi - 11352; Plants - 5937; Viruses - 0; Other Eukaryotes - 5521 (source: NCBI BLink). & (gnl|cdd|35522 : 719.0) no description available & (gnl|cdd|87495 : 197.0) no description available & (reliability: 2122.0) & (original description: Putative At3g18860, Description = AT3g18860/MCB22_3, PFAM = PF09070;PF08324;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold65002_1-10552' '(at3g14205 : 845.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 751.0) no description available & (gnl|cdd|66103 : 282.0) no description available & (reliability: 1582.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold83877_1-5463' '(at3g14205 : 322.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 265.0) no description available & (gnl|cdd|66103 : 121.0) no description available & (reliability: 606.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00020625ctg000_2618-11184' '(at1g31480 : 402.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 198.0) no description available & (reliability: 804.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00022042ctg012_890-7780' '(at3g43220 : 537.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 454.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 1074.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00033554ctg001_6526-12310' '(at3g14205 : 331.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 270.0) no description available & (gnl|cdd|66103 : 122.0) no description available & (reliability: 620.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf01847_838777-841831' '(at4g38690 : 524.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT4G34920.1); Has 888 Blast hits to 888 proteins in 280 species: Archae - 0; Bacteria - 676; Metazoa - 61; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39507 : 300.0) no description available & (reliability: 1048.0) & (original description: Putative PLC2, Description = Phosphoinositide-specific phospholipase C, PFAM = PF00388)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf02658_181391-184665' '(at4g38690 : 536.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT4G34920.1); Has 888 Blast hits to 888 proteins in 280 species: Archae - 0; Bacteria - 676; Metazoa - 61; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39507 : 314.0) no description available & (reliability: 1072.0) & (original description: Putative PLC2, Description = Phosphoinositide-specific phospholipase C, PFAM = PF00388)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf03776_10464-55801' '(at5g20840 : 914.0) Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G43220.1); Has 1872 Blast hits to 1673 proteins in 232 species: Archae - 0; Bacteria - 12; Metazoa - 657; Fungi - 613; Plants - 279; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|37099 : 767.0) no description available & (gnl|cdd|66103 : 280.0) no description available & (reliability: 1826.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf03776_34609-40178' '(at3g43220 : 346.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 303.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 692.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_382349-417937' '(at1g31480 : 187.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 118.0) no description available & (reliability: 374.0) & (original description: Putative SGR2, Description = Phospholipase DDHD2, PFAM = PF02862)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_414274-419947' '(at1g31480 : 225.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 135.0) no description available & (gnl|cdd|66529 : 91.6) no description available & (reliability: 450.0) & (original description: Putative ddhd1, Description = Phospholipase DDHD2, PFAM = PF02862)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_450062-454161' '(at1g31480 : 215.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 102.0) no description available & (reliability: 430.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf06829_268320-300534' '(at1g31480 : 1074.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 382.0) no description available & (gnl|cdd|66529 : 130.0) no description available & (reliability: 2148.0) & (original description: Putative SGR2, Description = Phospholipase SGR2, PFAM = PF02862)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf06829_292041-294913' '(at1g31480 : 100.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf07763_303518-314870' '(at3g14205 : 869.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 777.0) no description available & (gnl|cdd|66103 : 284.0) no description available & (reliability: 1640.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf08407_135319-146379' '(at3g14205 : 900.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 808.0) no description available & (gnl|cdd|66103 : 301.0) no description available & (reliability: 1694.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf09004_260267-270779' '(at2g26870 : 755.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|67785 : 301.0) no description available & (reliability: 1510.0) & (original description: Putative NPC1, Description = Non-specific phospholipase C1, PFAM = PF04185)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf10575_69154-94779' '(at3g18860 : 1117.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), PLAA family ubiquitin binding, PFU (InterPro:IPR015155), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), PUL (InterPro:IPR013535); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 46729 Blast hits to 23224 proteins in 745 species: Archae - 52; Bacteria - 6206; Metazoa - 17661; Fungi - 11352; Plants - 5937; Viruses - 0; Other Eukaryotes - 5521 (source: NCBI BLink). & (gnl|cdd|35522 : 719.0) no description available & (gnl|cdd|87495 : 200.0) no description available & (reliability: 2234.0) & (original description: Putative At3g18860, Description = AT3g18860/MCB22_3, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF08324;PF09070)' T
'11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf11182_228611-235149' '(at1g77420 : 458.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G16120.1); Has 4552 Blast hits to 4550 proteins in 1360 species: Archae - 49; Bacteria - 3106; Metazoa - 121; Fungi - 218; Plants - 474; Viruses - 41; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|36668 : 379.0) no description available & (gnl|cdd|32448 : 138.0) no description available & (reliability: 916.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'nbv0.5scaffold265_557791-564146' '(p93400|plda1_tobac : 1650.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1410.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 874.0) no description available & (gnl|cdd|29343 : 114.0) no description available & (reliability: 2820.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'nbv0.5scaffold3610_156473-165178' '(at2g42010 : 951.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 567.0) no description available & (q41142|plda1_ricco : 450.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 98.4) no description available & (reliability: 1902.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00004138ctg002_2076-11230' '(at2g42010 : 950.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 566.0) no description available & (q41142|plda1_ricco : 449.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 98.4) no description available & (reliability: 1900.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00009080ctg004_12995-19303' '(at1g55180 : 958.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36543 : 631.0) no description available & (q43270|plda1_maize : 603.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1916.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF00168;PF00614;PF12357;PF13091)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00015644ctg017_1364-7466' '(p93400|plda1_tobac : 1646.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1399.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 869.0) no description available & (gnl|cdd|29343 : 111.0) no description available & (reliability: 2798.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00018081ctg007_9305-19736' '(at2g42010 : 874.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 602.0) no description available & (q43270|plda1_maize : 504.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1748.0) & (original description: Putative pldb, Description = Phospholipase D beta 1 isoform 1b-2, PFAM = PF12357;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00025135ctg006_30821-37040' '(p93400|plda1_tobac : 1665.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1418.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 883.0) no description available & (gnl|cdd|29343 : 113.0) no description available & (reliability: 2836.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00168;PF00614;PF00614;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf00472_259199-266265' '(at4g35790 : 984.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 811.0) no description available & (q43270|plda1_maize : 728.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1968.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00614;PF00614;PF00168;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf00652_126768-169034' '(at3g16785 : 1364.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 424.0) no description available & (gnl|cdd|29903 : 100.0) no description available & (p93400|plda1_tobac : 95.1) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2728.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF00614;PF13091)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01719_391708-418745' '(at3g16785 : 1586.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 422.0) no description available & (gnl|cdd|29903 : 118.0) no description available & (p93844|plda2_orysa : 102.0) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) - Oryza sativa (Rice) & (reliability: 3172.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF00614;PF13091)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01956_241621-275009' '(at3g16785 : 1402.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 393.0) no description available & (gnl|cdd|29903 : 117.0) no description available & (p93844|plda2_orysa : 103.0) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) - Oryza sativa (Rice) & (reliability: 2804.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF13091;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01993_945735-951695' '(at4g35790 : 1014.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 817.0) no description available & (o04865|plda1_vigun : 719.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Vigna unguiculata (Cowpea) & (gnl|cdd|29343 : 85.0) no description available & (reliability: 2028.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02001_110488-123294' '(at4g35790 : 1242.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 833.0) no description available & (o04865|plda1_vigun : 705.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Vigna unguiculata (Cowpea) & (reliability: 2484.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF00614;PF00614;PF12357;PF00168)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02465_118965-126708' '(at2g42010 : 1291.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 903.0) no description available & (p93400|plda1_tobac : 735.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29343 : 90.4) no description available & (reliability: 2582.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00614;PF13091;PF00168)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02734_92641-126133' '(at2g42010 : 1419.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 905.0) no description available & (q41142|plda1_ricco : 718.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 99.6) no description available & (reliability: 2838.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF12357;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03307_149092-157447' '(q41142|plda1_ricco : 1381.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at1g52570 : 1325.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 867.0) no description available & (gnl|cdd|29343 : 94.2) no description available & (reliability: 2650.0) & (original description: Putative PLD2, Description = Phospholipase D alpha 2, PFAM = PF12357;PF00614;PF00614;PF00168)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03778_202061-207928' '(at1g55180 : 932.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36543 : 633.0) no description available & (q43270|plda1_maize : 596.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1864.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF00614;PF13091;PF00168;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03778_202620-207844' '(at1g55180 : 727.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q43270|plda1_maize : 535.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (gnl|cdd|36543 : 519.0) no description available & (reliability: 1454.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF12357;PF13091;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03865_46319-58407' '(at4g35790 : 1182.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 827.0) no description available & (q43007|plda1_orysa : 714.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Oryza sativa (Rice) & (reliability: 2364.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf04021_490443-498895' '(at2g42010 : 1303.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 881.0) no description available & (q43270|plda1_maize : 658.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (gnl|cdd|29343 : 92.7) no description available & (reliability: 2606.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf07382_178945-184149' '(p93400|plda1_tobac : 1139.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 952.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 566.0) no description available & (gnl|cdd|29343 : 110.0) no description available & (reliability: 1904.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00614;PF00168)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf09882_74454-80484' '(p93400|plda1_tobac : 1450.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at3g15730 : 1332.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|36543 : 862.0) no description available & (gnl|cdd|29343 : 106.0) no description available & (reliability: 2664.0) & (original description: Putative PLDBETA2, Description = Phospholipase D beta 2, PFAM = PF00614;PF00614;PF12357;PF00168)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf12609_196481-201951' '(q41142|plda1_ricco : 1148.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at3g15730 : 1139.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|36543 : 816.0) no description available & (gnl|cdd|29343 : 100.0) no description available & (reliability: 2278.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf14273_161113-169733' '(at4g35790 : 1301.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 828.0) no description available & (p93400|plda1_tobac : 706.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2602.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T
'11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf16022_520068-527642' '(at2g42010 : 1310.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 915.0) no description available & (p93400|plda1_tobac : 734.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29343 : 88.4) no description available & (reliability: 2620.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold4737_62810-67134' '(at3g15650 : 280.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1). & (gnl|cdd|37323 : 181.0) no description available & (gnl|cdd|65966 : 120.0) no description available & (reliability: 560.0) & (original description: Putative At3g15650, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230;PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold16772_1-7491' '(at4g22300 : 342.0) encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis; SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink). & (gnl|cdd|37323 : 196.0) no description available & (gnl|cdd|65966 : 150.0) no description available & (reliability: 684.0) & (original description: Putative SOBER1, Description = Carboxylesterase SOBER1, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold39534_88-3092' '(gnl|cdd|36728 : 218.0) no description available & (at5g16080 : 193.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 174.0) no description available & (q6l545|gid1_orysa : 125.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold25_30947-33977' '(gnl|cdd|36728 : 220.0) no description available & (at5g16080 : 191.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 181.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold310_329430-334201' '(at3g15650 : 370.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1). & (gnl|cdd|37323 : 234.0) no description available & (gnl|cdd|65966 : 149.0) no description available & (reliability: 740.0) & (original description: Putative At1g52700, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold2418_297477-318437' '(gnl|cdd|36728 : 236.0) no description available & (at5g16080 : 206.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 173.0) no description available & (q6l545|gid1_orysa : 118.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben044scf00000729ctg007_6777-9781' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 190.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative hsr203J, Description = HSR203J, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben044scf00031166ctg003_1534-5056' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 194.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 129.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 372.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00123_715844-721494' '(at1g52700 : 366.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G15650.2); Has 2146 Blast hits to 2133 proteins in 591 species: Archae - 4; Bacteria - 780; Metazoa - 345; Fungi - 280; Plants - 195; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (gnl|cdd|37323 : 234.0) no description available & (gnl|cdd|65966 : 156.0) no description available & (reliability: 732.0) & (original description: Putative At1g52700, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00349_261963-267453' '(at5g20060 : 343.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 217.0) no description available & (gnl|cdd|65966 : 143.0) no description available & (reliability: 686.0) & (original description: Putative LOC100283662, Description = Acyl-protein thioesterase 2, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00577_88450-93705' '(at1g68620 : 357.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 11100 Blast hits to 11083 proteins in 1670 species: Archae - 110; Bacteria - 6437; Metazoa - 919; Fungi - 1098; Plants - 1346; Viruses - 3; Other Eukaryotes - 1187 (source: NCBI BLink). & (gnl|cdd|36728 : 267.0) no description available & (gnl|cdd|87389 : 193.0) no description available & (q6l545|gid1_orysa : 139.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative CXE6, Description = Probable carboxylesterase 6, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 596.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 470.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_505135-508082' '(gnl|cdd|36728 : 255.0) no description available & (at1g19190 : 248.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 155.0) no description available & (q6l545|gid1_orysa : 107.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: Putative CXE7, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_549936-552847' '(at3g48700 : 254.0) carboxyesterase 13 (CXE13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1); Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114; Bacteria - 5663; Metazoa - 1261; Fungi - 886; Plants - 1402; Viruses - 3; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36728 : 247.0) no description available & (gnl|cdd|87389 : 142.0) no description available & (q6l545|gid1_orysa : 90.1) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf03209_146077-158494' '(at4g22300 : 346.0) encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis; SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink). & (gnl|cdd|37323 : 193.0) no description available & (gnl|cdd|65966 : 153.0) no description available & (reliability: 692.0) & (original description: Putative At4g22300, Description = Probable carboxylesterase SOBER1-like, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf03832_279487-282054' '(gnl|cdd|36728 : 237.0) no description available & (at5g16080 : 209.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf05283_75787-78791' '(gnl|cdd|36728 : 214.0) no description available & (at5g16080 : 189.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 175.0) no description available & (q6l545|gid1_orysa : 120.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf07004_49949-53503' '(at1g47480 : 382.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 275.0) no description available & (gnl|cdd|87389 : 162.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: Putative CXE2, Description = Probable carboxylesterase 2, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf09372_337736-340758' '(at5g16080 : 363.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 279.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (q6l545|gid1_orysa : 127.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 660.0) & (original description: Putative CXE17, Description = Probable carboxylesterase 17, PFAM = PF07859)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf13934_6570-13729' '(at5g20060 : 270.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 143.0) no description available & (gnl|cdd|65966 : 96.5) no description available & (reliability: 540.0) & (original description: Putative F6D8.5, Description = F6D8.5, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf13934_6985-13825' '(at5g20060 : 272.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 141.0) no description available & (gnl|cdd|65966 : 95.4) no description available & (reliability: 544.0) & (original description: Putative At5g20060, Description = Phospholipase/carboxylesterase family protein, PFAM = PF02230)' T
'11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf28250_51768-54757' '(at1g47480 : 295.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 257.0) no description available & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 590.0) & (original description: Putative CXE1, Description = CXE protein, PFAM = PF07859)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold3103_1248-7738' '(at1g74210 : 551.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|37469 : 169.0) no description available & (gnl|cdd|83744 : 164.0) no description available & (reliability: 1102.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold3735_86221-90752' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 664.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold4847_59137-63043' '(at1g66920 : 331.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 198.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 624.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold4847_63045-66534' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 670.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold35280_9719-14656' '(at4g18250 : 362.0) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 706.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF14380;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold35280_9776-14713' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 704.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold48597_1625-9058' '(at1g71340 : 373.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 113.0) no description available & (gnl|cdd|86214 : 101.0) no description available & (reliability: 746.0) & (original description: Putative GDPD4, Description = Glycerophosphodiester phosphodiesterase GDPD4, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold78641_1412-7437' '(at1g71340 : 227.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 88.9) no description available & (reliability: 454.0) & (original description: Putative GDPD4, Description = Putative Glycerophosphoryl diester phosphodiesterase, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1066_241186-245814' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 620.0) & (original description: Putative PGSC0003DMG400010701, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1380_130405-150040' '(at5g38260 : 342.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 618.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1631_131871-412560' '(at1g70250 : 312.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 594.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold2318_130525-138616' '(at1g66980 : 103.0) Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains.; suppressor of npr1-1 constitutive 4 (SNC4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Protein kinase, catalytic domain (InterPro:IPR000719), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 115599 Blast hits to 113492 proteins in 4573 species: Archae - 153; Bacteria - 13353; Metazoa - 42961; Fungi - 9619; Plants - 32809; Viruses - 285; Other Eukaryotes - 16419 (source: NCBI BLink). & (gnl|cdd|36401 : 87.8) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400010495, Description = Receptor-like kinase, PFAM = PF07714)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold3655_87658-91595' '(at5g38280 : 355.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold3655_155523-159639' '(at5g38280 : 347.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 670.0) & (original description: Putative PGSC0003DMG400020899, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold4089_106804-196612' '(at4g26690 : 490.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37469 : 213.0) no description available & (gnl|cdd|86214 : 88.2) no description available & (reliability: 980.0) & (original description: Putative BnaA03g48210D, Description = BnaA03g48210D protein, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold5988_42534-48697' '(at5g58170 : 605.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 165.0) no description available & (reliability: 1210.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg002_1-4145' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 672.0) & (original description: Putative glysoja_033594, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg003_1-2204' '(at1g70250 : 281.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 138.0) no description available & (reliability: 530.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg007_7847-12072' '(at5g38280 : 351.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005963ctg017_1005-5633' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 620.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00026280ctg006_1-2254' '(gnl|cdd|36401 : 288.0) no description available & (at5g38280 : 286.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17801|kpro_maize : 170.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 520.0) & (original description: Putative glysoja_036704, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00029680ctg004_2945-6016' '(at1g67000 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (p17801|kpro_maize : 196.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 620.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00049244ctg001_1-4307' '(at1g74210 : 504.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|83744 : 142.0) no description available & (gnl|cdd|37469 : 140.0) no description available & (reliability: 1008.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00055754ctg000_3233-6569' '(at1g70250 : 309.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 145.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 116.0) no description available & (reliability: 588.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101ctg15354_819-3947' '(at5g38280 : 156.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 152.0) no description available & (p17801|kpro_maize : 116.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 101.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400010499, Description = PR5-like receptor kinase, PFAM = PF13947;PF07714)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00307_128035-131150' '(at1g70250 : 385.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 293.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 752.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF07714)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00445_173322-178257' '(at3g02040 : 399.0) senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|37632 : 189.0) no description available & (gnl|cdd|86214 : 142.0) no description available & (reliability: 798.0) & (original description: Putative GDPD1, Description = Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00495_128150-135396' '(at1g74210 : 576.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|37469 : 182.0) no description available & (gnl|cdd|83744 : 167.0) no description available & (reliability: 1152.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00774_111480-118194' '(at5g58170 : 621.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 167.0) no description available & (reliability: 1242.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf01055_14826-19154' '(at3g02040 : 498.0) senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|37632 : 225.0) no description available & (gnl|cdd|86214 : 129.0) no description available & (reliability: 996.0) & (original description: Putative GDPD1, Description = Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf02290_196298-200378' '(at1g66920 : 321.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 289.0) no description available & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 163.0) no description available & (reliability: 580.0) & (original description: Putative RKO_3, Description = Ser/Thr receptor-like kinase, putative, expressed, PFAM = PF00069;PF13947)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04205_218355-228493' '(at5g55480 : 847.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 231.0) no description available & (gnl|cdd|86214 : 85.5) no description available & (reliability: 1694.0) & (original description: Putative GDPDL1, Description = Glycerophosphodiester phosphodiesterase GDPDL1, PFAM = PF03009;PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04551_271582-281731' '(at5g55480 : 838.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 233.0) no description available & (gnl|cdd|86214 : 85.1) no description available & (reliability: 1676.0) & (original description: Putative GDPDL3, Description = Glycerophosphodiester phosphodiesterase GDPDL3, PFAM = PF03009;PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04869_650988-655203' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 664.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04943_232373-237340' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 704.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf05731_14519-116736' '(at1g70250 : 311.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 215.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 592.0) & (original description: Putative glysoja_019068, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf07187_8249-17439' '(at4g26690 : 826.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37469 : 232.0) no description available & (gnl|cdd|86214 : 87.8) no description available & (reliability: 1652.0) & (original description: Putative GDPDL3, Description = Glycerophosphodiester phosphodiesterase GDPDL3, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf07187_11519-20531' '(at5g55480 : 537.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 117.0) no description available & (reliability: 1074.0) & (original description: Putative MRH5, Description = Putative glycerophosphoryl diester phosphodiesterase 3, PFAM = PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf11071_269562-273711' '(at1g66910 : 382.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 181.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 720.0) & (original description: Putative Sb03g006765, Description = Putative uncharacterized protein Sb03g006765, PFAM = PF14380;PF00069)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf11991_731-7462' '(at5g58170 : 620.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 166.0) no description available & (gnl|cdd|86214 : 80.5) no description available & (reliability: 1240.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T
'11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf13230_176207-188035' '(at1g71340 : 363.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 108.0) no description available & (gnl|cdd|30929 : 101.0) no description available & (reliability: 726.0) & (original description: Putative GDPD4, Description = Glycerophosphodiester phosphodiesterase GDPD4, PFAM = PF03009)' T
'11.9.3.4' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2' 'niben101scf02816_61539-71995' '(at2g19690 : 155.0) One of four PLA2 genes in Arabidopsis. Involved in stomatal opening in response to light. Expressed in guard cells.; phospholipase A2-beta (PLA2-BETA); FUNCTIONS IN: phospholipase A2 activity, calcium ion binding; INVOLVED IN: response to light stimulus, regulation of stomatal movement; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: vascular tissue, leaf mesophyll, guard cell; CONTAINS InterPro DOMAIN/s: Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29460.1). & (gnl|cdd|80306 : 128.0) no description available & (reliability: 310.0) & (original description: Putative PLA2, Description = Phospholipase A2 family protein, PFAM = )' T
'11.9.3.4' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2' 'niben101scf03284_802356-807190' '(gnl|cdd|80306 : 172.0) no description available & (at2g06925 : 152.0) Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine.; PLA2-ALPHA; FUNCTIONS IN: phospholipase A2 activity; INVOLVED IN: phospholipid metabolic process, lipid catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29470.1); Has 123 Blast hits to 123 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative t2pla2, Description = Phospholipase A2 family protein, PFAM = )' T
'11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf00585_227949-239869' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 710.0) no description available & (gnl|cdd|34909 : 331.0) no description available & (reliability: 1920.0) & (original description: Putative SAC6, Description = Phosphoinositide phosphatase SAC6, PFAM = PF02383)' T
'11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf01163_470506-483695' '(at3g03530 : 667.0) PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.; non-specific phospholipase C4 (NPC4); FUNCTIONS IN: hydrolase activity, acting on ester bonds, phospholipase C activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C5 (TAIR:AT3G03540.1); Has 2107 Blast hits to 2050 proteins in 380 species: Archae - 32; Bacteria - 1750; Metazoa - 0; Fungi - 127; Plants - 153; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67785 : 298.0) no description available & (reliability: 1334.0) & (original description: Putative NPC4, Description = Non-specific phospholipase C4, PFAM = PF04185)' T
'11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf02155_78958-84312' '(at3g48610 : 782.0) non-specific phospholipase C6 (NPC6); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2244 Blast hits to 2129 proteins in 399 species: Archae - 32; Bacteria - 1880; Metazoa - 0; Fungi - 127; Plants - 152; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|67785 : 306.0) no description available & (reliability: 1564.0) & (original description: Putative NPC6, Description = Non-specific phospholipase C6, PFAM = PF04185)' T
'11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf02203_345243-369957' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 714.0) no description available & (gnl|cdd|34909 : 333.0) no description available & (reliability: 1934.0) & (original description: Putative SAC7, Description = Phosphoinositide phosphatase SAC7, PFAM = PF02383)' T
'11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf05618_311915-316267' '(at1g13680 : 446.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative Sb01g032510, Description = Putative uncharacterized protein Sb01g032510, PFAM = )' T
'11.9.4' 'lipid metabolism.lipid degradation.beta-oxidation' '' ''
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'nbv0.3scaffold59027_1362-10949' '(at3g06810 : 1249.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (gnl|cdd|29655 : 614.0) no description available & (gnl|cdd|36682 : 608.0) no description available & (q9fs88|ivd1_soltu : 95.1) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 2498.0) & (original description: Putative IBR3, Description = Probable acyl-CoA dehydrogenase IBR3, PFAM = PF01636;PF02770;PF00441;PF02771)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'nbv0.5scaffold387_29432-41043' '(at4g16760 : 1138.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 875.0) no description available & (gnl|cdd|73248 : 593.0) no description available & (o64894|acox2_cucma : 275.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2276.0) & (original description: Putative ACX1, Description = Peroxisomal acyl-coenzyme A oxidase 1, PFAM = PF01756;PF14749;PF02770)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf00120_61436-85414' '(at3g06810 : 1260.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (gnl|cdd|29655 : 616.0) no description available & (gnl|cdd|36682 : 611.0) no description available & (q9fs88|ivd1_soltu : 96.7) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 2520.0) & (original description: Putative IBR3, Description = Probable acyl-CoA dehydrogenase IBR3, PFAM = PF01636;PF02770;PF02771;PF00441)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf02438_219830-243884' '(at1g06290 : 1085.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|35357 : 818.0) no description available & (gnl|cdd|73248 : 497.0) no description available & (o64894|acox2_cucma : 366.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2170.0) & (original description: Putative ACX3, Description = Acyl-coenzyme A oxidase 3, peroxisomal, PFAM = PF01756;PF02770;PF00441)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf03085_661271-670421' '(at1g06290 : 1075.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|35357 : 815.0) no description available & (gnl|cdd|73248 : 492.0) no description available & (o64894|acox2_cucma : 356.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2150.0) & (original description: Putative ACX3, Description = Acyl-coenzyme A oxidase 3, peroxisomal, PFAM = PF02770;PF01756;PF00441)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf03510_291304-298852' '(at5g65110 : 1212.0) Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis.; acyl-CoA oxidase 2 (ACX2); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 3 (TAIR:AT1G06290.1); Has 15850 Blast hits to 15835 proteins in 1495 species: Archae - 314; Bacteria - 10867; Metazoa - 1644; Fungi - 650; Plants - 316; Viruses - 0; Other Eukaryotes - 2059 (source: NCBI BLink). & (o64894|acox2_cucma : 1200.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|35357 : 794.0) no description available & (gnl|cdd|73248 : 707.0) no description available & (reliability: 2424.0) & (original description: Putative ACX2, Description = Acyl-coenzyme A oxidase 2, peroxisomal, PFAM = PF01756;PF00441;PF02770)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf04479_8194-11316' '(at4g16760 : 284.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 235.0) no description available & (gnl|cdd|73248 : 189.0) no description available & (o64894|acox2_cucma : 80.1) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 568.0) & (original description: Putative acox1, Description = Acyl-coenzyme A oxidase, PFAM = PF02770;PF14749)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf05307_362572-369974' '(at3g51840 : 756.0) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (gnl|cdd|35360 : 613.0) no description available & (gnl|cdd|29651 : 544.0) no description available & (q9fs88|ivd1_soltu : 160.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 1512.0) & (original description: Putative acx4, Description = Acyl-CoA dehydrogenase, C-terminal domain protein, PFAM = PF00441;PF02771;PF02770)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf06157_43084-53950' '(at4g16760 : 1134.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 865.0) no description available & (gnl|cdd|73248 : 585.0) no description available & (o64894|acox2_cucma : 268.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2268.0) & (original description: Putative Acx1A, Description = Acyl-coenzyme A oxidase, PFAM = PF01756;PF14749;PF02770)' T
'11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf06408_342303-349195' '(at3g51840 : 762.0) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (gnl|cdd|35360 : 618.0) no description available & (gnl|cdd|29651 : 541.0) no description available & (q9fs88|ivd1_soltu : 154.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 1524.0) & (original description: Putative ACX4, Description = Acyl-coenzyme A oxidase 4, peroxisomal, PFAM = PF02771;PF00441;PF02770)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.3scaffold14335_17652-23956' '(at4g16800 : 320.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 320.0) no description available & (gnl|cdd|82307 : 271.0) no description available & (reliability: 640.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 992.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 976.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold1324_1-12352' '(at4g13360 : 299.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 211.0) no description available & (gnl|cdd|75599 : 118.0) no description available & (reliability: 598.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 834.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold2772_200310-220742' '(at4g13360 : 553.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 422.0) no description available & (gnl|cdd|75306 : 245.0) no description available & (reliability: 1106.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold3845_176346-192566' '(at4g31810 : 571.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 445.0) no description available & (gnl|cdd|75599 : 262.0) no description available & (reliability: 1142.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben044scf00030495ctg011_2184-10895' '(at3g24360 : 539.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 408.0) no description available & (gnl|cdd|75306 : 239.0) no description available & (reliability: 1078.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben044scf00053207ctg002_668-9359' '(at4g31810 : 374.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 278.0) no description available & (gnl|cdd|76257 : 158.0) no description available & (reliability: 748.0) & (original description: Putative BnaCnng76550D, Description = BnaCnng76550D protein, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 968.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf00917_462841-477723' '(at4g13360 : 583.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 432.0) no description available & (gnl|cdd|75306 : 241.0) no description available & (reliability: 1166.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf02451_660668-669283' '(at3g24360 : 476.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 355.0) no description available & (gnl|cdd|75306 : 208.0) no description available & (reliability: 952.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113;PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf02568_80434-89389' '(at1g06550 : 534.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: response to karrikin, fatty acid beta-oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 26566 Blast hits to 26556 proteins in 2155 species: Archae - 406; Bacteria - 18031; Metazoa - 1157; Fungi - 686; Plants - 463; Viruses - 0; Other Eukaryotes - 5823 (source: NCBI BLink). & (gnl|cdd|36897 : 341.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 1068.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-coenzyme A hydrolase, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf04103_1-12416' '(at3g24360 : 550.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 415.0) no description available & (gnl|cdd|75306 : 250.0) no description available & (reliability: 1100.0) & (original description: Putative At3g24360, Description = Putative 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial-like, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf05011_153544-170214' '(at4g31810 : 537.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 409.0) no description available & (gnl|cdd|75599 : 232.0) no description available & (reliability: 1074.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf05348_10464-13195' '(at1g65520 : 250.0) encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation; "delta(3), delta(2)-enoyl CoA isomerase 1" (ECI1); FUNCTIONS IN: carnitine racemase activity, catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 6860 Blast hits to 6860 proteins in 1261 species: Archae - 142; Bacteria - 4521; Metazoa - 587; Fungi - 178; Plants - 198; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|31227 : 86.3) no description available & (reliability: 500.0) & (original description: Putative ECI1, Description = Enoyl-CoA delta isomerase 1, peroxisomal, PFAM = PF00378)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf06078_463131-473379' '(at4g16800 : 319.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 318.0) no description available & (gnl|cdd|82307 : 269.0) no description available & (reliability: 638.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T
'11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf11064_11955-14671' '(at4g14430 : 233.0) Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.; indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink). & (gnl|cdd|31227 : 80.1) no description available & (reliability: 466.0) & (original description: Putative ECI3, Description = Enoyl-CoA delta isomerase 3, PFAM = PF00378)' T
'11.9.4.4' 'lipid metabolism.lipid degradation.beta-oxidation.hydroxybutyryl CoA DH' 'niben101scf03720_108168-113093' '(at4g16210 : 380.0) enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink). & (gnl|cdd|36893 : 241.0) no description available & (gnl|cdd|81879 : 236.0) no description available & (q39659|mfpa_cucsa : 101.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 760.0) & (original description: Putative ECHIA, Description = Probable enoyl-CoA hydratase 1, peroxisomal, PFAM = PF00378)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.3scaffold21277_13385-15349' '(at1g48320 : 206.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 109.0) no description available & (gnl|cdd|48038 : 81.4) no description available & (reliability: 412.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.5scaffold592_535731-580919' '(at2g29590 : 127.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 81.5) no description available & (reliability: 254.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.5scaffold3985_102032-162355' '(at1g01710 : 139.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative CNTE1, Description = Acyl-coenzyme A thioesterase 8, PFAM = PF13622)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00001266ctg012_4861-8052' '(at2g29590 : 123.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00015817ctg009_15771-20810' '(at2g29590 : 175.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 115.0) no description available & (reliability: 350.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00032678ctg004_2557-5108' '(at1g48320 : 206.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 113.0) no description available & (gnl|cdd|48038 : 81.4) no description available & (reliability: 412.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf00120_173187-175654' '(at1g48320 : 172.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf01968_87171-101350' '(at1g01710 : 601.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|32129 : 287.0) no description available & (gnl|cdd|38226 : 267.0) no description available & (reliability: 1202.0) & (original description: Putative tesB, Description = Acyl-CoA thioesterase 2, PFAM = PF00027;PF13622)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf01968_89280-145053' '(at1g01710 : 139.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative CNTE1, Description = Acyl-coenzyme A thioesterase 8, PFAM = PF13622)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_505135-508082' '(gnl|cdd|36728 : 255.0) no description available & (at1g19190 : 248.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 155.0) no description available & (q6l545|gid1_orysa : 107.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative CXE7, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_549936-552847' '(at3g48700 : 254.0) carboxyesterase 13 (CXE13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1); Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114; Bacteria - 5663; Metazoa - 1261; Fungi - 886; Plants - 1402; Viruses - 3; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36728 : 247.0) no description available & (gnl|cdd|87389 : 142.0) no description available & (q6l545|gid1_orysa : 90.1) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf03016_47943-55285' '(at2g03550 : 238.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 224.0) no description available & (gnl|cdd|87389 : 140.0) no description available & (q6l545|gid1_orysa : 87.4) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: Putative ASH1, Description = Acylsugar acylhydrolase 1, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf04765_89819-92292' '(at1g48320 : 204.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 108.0) no description available & (reliability: 408.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf05830_339831-342793' '(at2g03550 : 225.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 221.0) no description available & (gnl|cdd|87389 : 146.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf07616_9648-24608' '(at1g04290 : 192.0) Thioesterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G29590.1); Has 964 Blast hits to 962 proteins in 292 species: Archae - 38; Bacteria - 286; Metazoa - 202; Fungi - 157; Plants - 213; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38538 : 131.0) no description available & (gnl|cdd|48038 : 81.8) no description available & (reliability: 384.0) & (original description: Putative ACOT13, Description = Acyl-coenzyme A thioesterase-like protein, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf08419_154097-156573' '(at1g48320 : 200.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 108.0) no description available & (reliability: 400.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_45009-49219' '(at2g29590 : 180.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 116.0) no description available & (reliability: 360.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_48234-86799' '(at2g29590 : 123.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 81.5) no description available & (reliability: 246.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_70437-88565' '(at2g29590 : 180.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 113.0) no description available & (reliability: 360.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf10620_11671-15899' '(at1g04290 : 197.0) Thioesterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G29590.1); Has 964 Blast hits to 962 proteins in 292 species: Archae - 38; Bacteria - 286; Metazoa - 202; Fungi - 157; Plants - 213; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38538 : 134.0) no description available & (gnl|cdd|48038 : 88.0) no description available & (reliability: 394.0) & (original description: Putative Sb06g017150, Description = Putative uncharacterized protein Sb06g017150, PFAM = PF03061)' T
'11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf17244_25240-27707' '(at1g48320 : 183.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 105.0) no description available & (reliability: 366.0) & (original description: Putative DHNAT2, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2, PFAM = PF03061)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold249_85568-90143' '(q8w1l6|mfp_orysa : 336.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 328.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 181.0) no description available & (gnl|cdd|36893 : 123.0) no description available & (reliability: 656.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF02737;PF00378)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold1519_387075-396626' '(q39659|mfpa_cucsa : 1105.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1080.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 461.0) no description available & (gnl|cdd|36896 : 373.0) no description available & (reliability: 2160.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF00725;PF02737)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold1519_387096-392818' '(q39659|mfpa_cucsa : 129.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 116.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|82308 : 111.0) no description available & (reliability: 232.0) & (original description: Putative crt, Description = Enoyl-CoA hydratase, PFAM = PF00378)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben044scf00017976ctg002_1-7950' '(q39659|mfpa_cucsa : 1069.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1048.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 463.0) no description available & (gnl|cdd|36896 : 369.0) no description available & (reliability: 2096.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF00725)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf00605_175390-186677' '(at4g29010 : 1001.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (q8w1l6|mfp_orysa : 943.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (gnl|cdd|83754 : 481.0) no description available & (gnl|cdd|36896 : 386.0) no description available & (reliability: 2002.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF00378;PF00725;PF02737)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf02354_1462311-1468569' '(q8w1l6|mfp_orysa : 290.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 286.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 175.0) no description available & (gnl|cdd|36893 : 115.0) no description available & (reliability: 572.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF02737)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf06506_64447-74713' '(q8w1l6|mfp_orysa : 821.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 817.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 446.0) no description available & (gnl|cdd|36896 : 353.0) no description available & (reliability: 1634.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF02737;PF00725;PF00725;PF00378)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf13098_96658-108046' '(at4g29010 : 1008.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (q8w1l6|mfp_orysa : 935.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (gnl|cdd|83754 : 492.0) no description available & (gnl|cdd|36896 : 400.0) no description available & (reliability: 2016.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF02737;PF00378;PF00725)' T
'11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf15965_52257-61836' '(q39659|mfpa_cucsa : 1102.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1074.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 453.0) no description available & (gnl|cdd|36896 : 368.0) no description available & (reliability: 2148.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF00725)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'nbv0.5scaffold2136_28447-32400' '(at4g33790 : 414.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 356.0) no description available & (gnl|cdd|87425 : 232.0) no description available & (reliability: 828.0) & (original description: Putative ms2, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'nbv0.5scaffold6398_98955-105406' '(at4g33790 : 611.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 458.0) no description available & (gnl|cdd|87425 : 240.0) no description available & (reliability: 1222.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF03015;PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben044scf00010712ctg001_12949-15560' '(at3g44540 : 216.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 4 (FAR4); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36435 : 192.0) no description available & (gnl|cdd|87425 : 86.8) no description available & (reliability: 432.0) & (original description: Putative CER4, Description = Fatty acyl-CoA reductase, PFAM = PF07993;PF03015)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben044scf00029995ctg009_1369-5755' '(at4g33790 : 437.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 338.0) no description available & (gnl|cdd|87425 : 213.0) no description available & (reliability: 874.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF07993;PF03015)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf01110_178823-183996' '(at3g44550 : 348.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 5 (FAR5); CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 8 (TAIR:AT3G44560.1); Has 2710 Blast hits to 2672 proteins in 523 species: Archae - 2; Bacteria - 816; Metazoa - 1013; Fungi - 330; Plants - 287; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36435 : 287.0) no description available & (gnl|cdd|87425 : 203.0) no description available & (reliability: 696.0) & (original description: Putative msh1, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf03113_92128-98826' '(at4g33790 : 635.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 466.0) no description available & (gnl|cdd|87425 : 240.0) no description available & (reliability: 1270.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF03015;PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05079_30383-39966' '(at3g44540 : 115.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 4 (FAR4); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36435 : 113.0) no description available & (gnl|cdd|87425 : 89.2) no description available & (reliability: 230.0) & (original description: Putative FAR, Description = Fatty acyl-coenzyme A reductase, PFAM = PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05732_414706-419603' '(at4g33790 : 494.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 408.0) no description available & (gnl|cdd|87425 : 232.0) no description available & (reliability: 988.0) & (original description: Putative msh1, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF03015;PF07993)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05732_417085-418902' '(at5g22500 : 139.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 1 (FAR1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity, long-chain-fatty-acyl-CoA reductase activity; INVOLVED IN: response to salt stress, microsporogenesis, response to wounding, suberin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 4 (TAIR:AT3G44540.1); Has 2592 Blast hits to 2555 proteins in 497 species: Archae - 6; Bacteria - 759; Metazoa - 1002; Fungi - 307; Plants - 285; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36435 : 118.0) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400023759, Description = Fatty acid reductase 4, PFAM = PF03015)' T
'11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf08643_75961-86006' '(at4g33790 : 590.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 467.0) no description available & (gnl|cdd|87425 : 238.0) no description available & (reliability: 1180.0) & (original description: Putative ms2, Description = Fatty acyl-CoA reductase, PFAM = PF07993;PF03015)' T
'11.9.4.14' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl isomerase' 'niben101scf02996_614932-621030' '(at5g43280 : 377.0) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.; "delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1" (DCI1); FUNCTIONS IN: enoyl-CoA hydratase activity, delta3,5-delta2,4-dienoyl-CoA isomerase activity; INVOLVED IN: fatty acid catabolic process, seed germination, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G16800.1); Has 36679 Blast hits to 36669 proteins in 2260 species: Archae - 469; Bacteria - 24045; Metazoa - 1683; Fungi - 913; Plants - 624; Viruses - 0; Other Eukaryotes - 8945 (source: NCBI BLink). & (gnl|cdd|36894 : 344.0) no description available & (gnl|cdd|75387 : 300.0) no description available & (reliability: 754.0) & (original description: Putative DCI1, Description = Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal, PFAM = PF00378)' T
'11.9.4.14' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl isomerase' 'niben101scf02996_619708-622555' '(at5g43280 : 288.0) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.; "delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1" (DCI1); FUNCTIONS IN: enoyl-CoA hydratase activity, delta3,5-delta2,4-dienoyl-CoA isomerase activity; INVOLVED IN: fatty acid catabolic process, seed germination, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G16800.1); Has 36679 Blast hits to 36669 proteins in 2260 species: Archae - 469; Bacteria - 24045; Metazoa - 1683; Fungi - 913; Plants - 624; Viruses - 0; Other Eukaryotes - 8945 (source: NCBI BLink). & (gnl|cdd|36894 : 270.0) no description available & (gnl|cdd|75387 : 223.0) no description available & (reliability: 576.0) & (original description: Putative caiD, Description = Enoyl-CoA hydratase, PFAM = PF00378)' T
'11.9.4.99' 'lipid metabolism.lipid degradation.beta-oxidation.misc' '' ''
'11.10' 'lipid metabolism.glycolipid synthesis' '' ''
'11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'nbv0.3scaffold5344_46775-55668' '(at4g31780 : 741.0) Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.; monogalactosyl diacylglycerol synthase 1 (MGD1); FUNCTIONS IN: UDP-glycosyltransferase activity, 1,2-diacylglycerol 3-beta-galactosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity; INVOLVED IN: thylakoid membrane organization, glycolipid biosynthetic process, galactolipid biosynthetic process, embryo development; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235), Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 2406 Blast hits to 2406 proteins in 811 species: Archae - 0; Bacteria - 2169; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|70396 : 224.0) no description available & (reliability: 1482.0) & (original description: Putative MGD A, Description = Probable monogalactosyldiacylglycerol synthase, chloroplastic, PFAM = PF06925;PF04101)' T
'11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf00412_134319-149207' '(at4g31780 : 739.0) Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.; monogalactosyl diacylglycerol synthase 1 (MGD1); FUNCTIONS IN: UDP-glycosyltransferase activity, 1,2-diacylglycerol 3-beta-galactosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity; INVOLVED IN: thylakoid membrane organization, glycolipid biosynthetic process, galactolipid biosynthetic process, embryo development; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235), Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 2406 Blast hits to 2406 proteins in 811 species: Archae - 0; Bacteria - 2169; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|70396 : 224.0) no description available & (reliability: 1478.0) & (original description: Putative MGD A, Description = Probable monogalactosyldiacylglycerol synthase, chloroplastic, PFAM = PF06925;PF04101)' T
'11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf04918_345635-350443' '(at5g20410 : 668.0) Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.; monogalactosyldiacylglycerol synthase 2 (MGD2); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1572 Blast hits to 1572 proteins in 585 species: Archae - 0; Bacteria - 1385; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|70396 : 213.0) no description available & (reliability: 1336.0) & (original description: Putative MGD2, Description = Monogalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF06925;PF04101)' T
'11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf05220_167313-174852' '(at2g11810 : 665.0) MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.; monogalactosyldiacylglycerol synthase type C (MGDC); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase 2 (TAIR:AT5G20410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70396 : 215.0) no description available & (reliability: 1330.0) & (original description: Putative MGD3, Description = Monogalactosyldiacylglycerol synthase 3, chloroplastic, PFAM = PF06925;PF04101)' T
'11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf11154_1531-6724' '(at5g20410 : 677.0) Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.; monogalactosyldiacylglycerol synthase 2 (MGD2); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1572 Blast hits to 1572 proteins in 585 species: Archae - 0; Bacteria - 1385; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|70396 : 220.0) no description available & (reliability: 1354.0) & (original description: Putative MGD2, Description = Monogalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF04101;PF06925)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.3scaffold72271_258-7356' '(q6dw73|dgdg2_lotja : 643.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 625.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.5scaffold809_514486-521907' '(q6dw74|dgdg1_lotja : 1090.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (at3g11670 : 1031.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2062.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF13692)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.5scaffold4576_21884-28456' '(q6dw73|dgdg2_lotja : 627.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 593.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1186.0) & (original description: Putative DGD, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf02497_249493-258667' '(q6dw73|dgdg2_lotja : 645.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 615.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF00534)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf03320_344035-352986' '(q6dw76|dgdg1_soybn : 1138.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Glycine max (Soybean) & (at3g11670 : 1042.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2084.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF00534)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf03428_16908-24329' '(q6dw74|dgdg1_lotja : 1114.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (at3g11670 : 1050.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2100.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF13692)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf05118_140748-149995' '(q6dw73|dgdg2_lotja : 645.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 621.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1242.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T
'11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf08081_356301-363399' '(q6dw73|dgdg2_lotja : 640.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 625.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T
'11.10.3' 'lipid metabolism.glycolipid synthesis.UDP-sulfoquinovose synthase' 'niben101scf01998_868021-872244' '(q84ki6|sqd1_spiol : 777.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (at4g33030 : 752.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (gnl|cdd|36585 : 340.0) no description available & (gnl|cdd|30800 : 124.0) no description available & (reliability: 1504.0) & (original description: Putative SQD1, Description = UDP-sulfoquinovose synthase, chloroplastic, PFAM = PF01370)' T
'11.10.3' 'lipid metabolism.glycolipid synthesis.UDP-sulfoquinovose synthase' 'niben101scf06748_268525-272820' '(q84ki6|sqd1_spiol : 779.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (at4g33030 : 754.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (gnl|cdd|36585 : 338.0) no description available & (gnl|cdd|30800 : 121.0) no description available & (reliability: 1508.0) & (original description: Putative SQD1, Description = UDP-sulfoquinovose synthase, chloroplastic, PFAM = PF01370)' T
'11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben044scf00003503ctg001_3357-10315' '(at5g01220 : 701.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 250.0) no description available & (gnl|cdd|30787 : 133.0) no description available & (reliability: 1402.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T
'11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben101scf00348_1066292-1076475' '(at5g01220 : 691.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 248.0) no description available & (gnl|cdd|30787 : 130.0) no description available & (reliability: 1382.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T
'11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben101scf03325_1498-20816' '(at5g01220 : 696.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 260.0) no description available & (gnl|cdd|30787 : 133.0) no description available & (reliability: 1392.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T
'11.10.5' 'lipid metabolism.glycolipid synthesis.chloroplastic UGPase' '' ''
'11.10.1001' 'lipid metabolism.galactolipid synthesis' '2-o-glycerol-beta-d-galactose' '' M
'11.10.1002' 'lipid metabolism.galactolipid synthesis' 'digalactosylglycerol' '' M
'11.1001' 'lipid metabolism' 'acetyloleanolic acid' 'lipid metabolism' M
'11.1002' 'lipid metabolism' 'fa 16:0' 'lipid metabolism' M
'11.1003' 'lipid metabolism' 'fa 18:0' 'lipid metabolism' M
'11.1004' 'lipid metabolism' 'oleic acid' 'lipid metabolism' M
'11.1005' 'lipid metabolism' 'oleyl alcohol' 'lipid metabolism' M
'11.1006' 'lipid metabolism' 'oleyl oleate' 'lipid metabolism' M
'11.1007' 'lipid metabolism' 'palmitic acid' 'lipid metabolism' M
'11.1008' 'lipid metabolism' 'pentadecanoic acid' 'lipid metabolism' M
'11.1009' 'lipid metabolism' 'stearic acid' 'lipid metabolism' M
'11.1010' 'lipid metabolism' 'tridecanoic acid' 'lipid metabolism' M
'11.1011' 'lipid metabolism' 'undecanoic acid' 'lipid metabolism' M
'11.1012' 'lipid metabolism' 'heptanoic acid' 'lipid metabolism, also called oenanthic acid' M
'11.1013' 'lipid metabolism' 'choline' 'lipid metabolism, glycerolipids' M
'11.1014' 'lipid metabolism' 'dioleoylglycerol' 'lipid metabolism, glycerolipids' M
'11.1015' 'lipid metabolism' 'diphosphatidylglycerol' 'lipid metabolism, glycerolipids' M
'11.1016' 'lipid metabolism' 'ethanolamine' 'lipid metabolism, glycerolipids' M
'11.1017' 'lipid metabolism' 'glycerol' 'lipid metabolism, glycerolipids' M
'11.1018' 'lipid metabolism' 'glycerol-2-p' 'lipid metabolism, glycerolipids' M
'11.1019' 'lipid metabolism' 'phosphatidylcholine' 'lipid metabolism, glycerolipids' M
'11.1020' 'lipid metabolism' 'phosphatidylethanolamine glycine' 'lipid metabolism, glycerolipids' M
'11.1021' 'lipid metabolism' 'phosphatidylserine' 'lipid metabolism, glycerolipids' M
'11.1022' 'lipid metabolism' 'trilinolein' 'lipid metabolism, glycerolipids' M
'11.1023' 'lipid metabolism' 'triolein' 'lipid metabolism, glycerolipids' M
'11.1024' 'lipid metabolism' 'linoleic acid' 'lipid metabolism, is FA 9,12(Z,Z)-18:2' M
'11.1025' 'lipid metabolism' 'acetyl-coa' 'lipid metabolism, organic acids' M
'11.1026' 'lipid metabolism' 'coa-sh' 'lipid metabolism, organic acids' M
'11.1027' 'lipid metabolism' 'coa-s-s-coa' 'lipid metabolism, organic acids' M
'11.1028' 'lipid metabolism' 'glycerol-3-p' 'lipid metabolism; hormone metabolism.auxin (is polar fraction)' M
'11.1029' 'lipid metabolism' 'linolenic acid' 'lipid metabolism, is FA 9,12,15(Z,Z,Z)-18:3' M
'11.1030' 'lipid metabolism' '3(e)-hexenal' '' M
'11.1031' 'lipid metabolism' '3(z)-hexenal' '' M
'11.1032' 'lipid metabolism' 'hexanal' '' M
'11.1033' 'lipid metabolism' 'hexanoic acid' '' M
'11.1034' 'lipid metabolism' 'pentanoic acid' '' M
'11.1035' 'lipid metabolism' 'hexanol' '' M
'11.1036' 'lipid metabolism' '2(e)-hexenal' 'volatile' M
'11.1037' 'lipid metabolism' '3(z)-hexen-1-ol' 'volatile' M
'11.1038' 'lipid metabolism' '3(e)-hexenol' 'volatile' M
'11.1039' 'lipid metabolism' '2-ethylhexanoic acid' '' M
'11.1040' 'lipid metabolism' '13-hydroperoxylinolenic acid' '' M
'11.1041' 'lipid metabolism' '13(s)-hydroperoxy-9-(z),11(e)-octadecadienoic acid' '' M
'12' 'N-metabolism' '' ''
'12.1' 'N-metabolism.nitrate metabolism' '' ''
'12.1.1' 'N-metabolism.nitrate metabolism.NR' 'nbv0.3scaffold70661_1518-6481' '(p36859|nia_pethy : 868.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Petunia hybrida (Petunia) & (at1g37130 : 772.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 671.0) no description available & (gnl|cdd|35755 : 535.0) no description available & (reliability: 1544.0) & (original description: Putative niaD, Description = Nitrate reductase, PFAM = PF00174;PF03404)' T
'12.1.1' 'N-metabolism.nitrate metabolism.NR' 'nbv0.5scaffold558_556606-563863' '(p08509|nia2_tobac : 1820.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2) - Nicotiana tabacum (Common tobacco) & (at1g37130 : 1448.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 692.0) no description available & (gnl|cdd|35755 : 554.0) no description available & (reliability: 2896.0) & (original description: Putative NIA2, Description = Nitrate reductase [NADH] 2, PFAM = PF00173;PF03404;PF00175;PF00970;PF00174)' T
'12.1.1' 'N-metabolism.nitrate metabolism.NR' 'niben101scf34590_89114-96657' '(p08509|nia2_tobac : 1819.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2) - Nicotiana tabacum (Common tobacco) & (at1g37130 : 1446.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 690.0) no description available & (gnl|cdd|35755 : 553.0) no description available & (reliability: 2892.0) & (original description: Putative NIA2, Description = Nitrate reductase [NADH] 2, PFAM = PF03404;PF00970;PF00173;PF00174;PF00175)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'nbv0.3scaffold25448_2875-9394' '(p38500|nir_betve : 964.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 931.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 640.0) no description available & (gnl|cdd|35780 : 607.0) no description available & (reliability: 1862.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'nbv0.5scaffold1361_236391-242921' '(p38500|nir_betve : 964.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 931.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 640.0) no description available & (gnl|cdd|35780 : 607.0) no description available & (reliability: 1862.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben044scf00010341ctg004_1658-6946' '(p38500|nir_betve : 959.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 927.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 644.0) no description available & (gnl|cdd|35780 : 608.0) no description available & (reliability: 1854.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf00321_253115-260003' '(p38500|nir_betve : 746.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 721.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|35780 : 482.0) no description available & (gnl|cdd|83089 : 474.0) no description available & (reliability: 1442.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460;PF03460)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf02393_99502-104790' '(p38500|nir_betve : 959.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 927.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 644.0) no description available & (gnl|cdd|35780 : 608.0) no description available & (reliability: 1854.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf02408_247512-252781' '(p05314|nir_spiol : 952.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (at2g15620 : 944.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 655.0) no description available & (gnl|cdd|35780 : 621.0) no description available & (reliability: 1888.0) & (original description: Putative nii3, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T
'12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf07103_325016-331364' '(p05314|nir_spiol : 951.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (at2g15620 : 939.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 657.0) no description available & (gnl|cdd|35780 : 615.0) no description available & (reliability: 1878.0) & (original description: Putative nii3, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T
'12.2' 'N-metabolism.ammonia metabolism' '' ''
'12.2.1' 'N-metabolism.ammonia metabolism.glutamate synthase' '' ''
'12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'nbv0.3scaffold18483_1-26068' '(at5g04140 : 1939.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 1910.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 1637.0) no description available & (gnl|cdd|83964 : 1072.0) no description available & (reliability: 3878.0) & (original description: Putative glsF, Description = Glutamate synthase (Ferredoxin), PFAM = PF04898;PF01645;PF00310)' T
'12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'nbv0.5scaffold6509_7240-61528' '(at5g04140 : 2784.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2768.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2366.0) no description available & (gnl|cdd|83964 : 1615.0) no description available & (reliability: 5568.0) & (original description: Putative glsF, Description = Ferredoxin-dependent glutamate synthase, PFAM = PF01493;PF01645;PF04898;PF00310)' T
'12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf04198_48695-110193' '(at5g04140 : 2798.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2780.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2378.0) no description available & (gnl|cdd|83964 : 1626.0) no description available & (reliability: 5596.0) & (original description: Putative GLU1, Description = Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial, PFAM = PF01645;PF00310;PF04898;PF01493)' T
'12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf04198_103310-107382' '(q43155|gltb_spiol : 369.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (at2g41220 : 365.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.; glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink). & (gnl|cdd|35620 : 319.0) no description available & (gnl|cdd|29611 : 281.0) no description available & (reliability: 730.0) & (original description: Putative glsF, Description = Glutamate synthase (Ferredoxin), PFAM = PF01493;PF01493)' T
'12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf12966_3386-59962' '(at5g04140 : 2786.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2779.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2373.0) no description available & (gnl|cdd|83964 : 1624.0) no description available & (reliability: 5572.0) & (original description: Putative GLU2, Description = Ferredoxin-dependent glutamate synthase 2, chloroplastic, PFAM = PF04898;PF01645;PF00310;PF01493)' T
'12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'niben044scf00010356ctg004_1-4248' '(q03460|glsn_medsa : 584.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (gnl|cdd|35620 : 569.0) no description available & (at5g53460 : 565.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (gnl|cdd|84303 : 476.0) no description available & (reliability: 1130.0) & (original description: Putative glt1, Description = Glutamate synthase, NADH/NADPH, small subunit, PFAM = PF07992;PF07992)' T
'12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'niben101scf02290_231020-244553' '(at5g53460 : 3579.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (q03460|glsn_medsa : 3566.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (gnl|cdd|35620 : 3243.0) no description available & (gnl|cdd|83964 : 1590.0) no description available & (reliability: 7158.0) & (original description: Putative GLT1, Description = Glutamate synthase 1 [NADH], chloroplastic, PFAM = PF07992;PF01645;PF04898;PF01493;PF00310;PF14691)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'nbv0.3scaffold19399_3069-6547' '(at3g53180 : 82.4) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben044scf00024600ctg001_5803-10422' '(at3g53180 : 107.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = Glutamate-ammonia ligase-like protein, PFAM = PF00120;PF00120)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben044scf00052109ctg000_3075-6914' '(at3g53180 : 132.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00345_258217-264505' '(p12424|glna_nicpl : 677.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 635.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 568.0) no description available & (gnl|cdd|84537 : 234.0) no description available & (reliability: 1270.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00824_69603-75957' '(p14656|gln11_orysa : 624.0) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2) (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) - Oryza sativa (Rice) & (at5g37600 : 619.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 562.0) no description available & (gnl|cdd|84537 : 230.0) no description available & (reliability: 1238.0) & (original description: Putative GLN1, Description = Glutamine synthetase cytosolic isozyme, PFAM = PF00120;PF03951)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00936_13183-16661' '(at3g53180 : 94.7) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00936_13191-17030' '(at3g53180 : 144.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf01765_200099-206211' '(p12424|glna_nicpl : 665.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 639.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 573.0) no description available & (gnl|cdd|84537 : 231.0) no description available & (reliability: 1278.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF00120;PF03951)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf02330_100493-106327' '(o22506|glna2_dauca : 728.0) Glutamine synthetase, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS2) - Daucus carota (Carrot) & (at5g35630 : 677.0) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (gnl|cdd|35902 : 572.0) no description available & (gnl|cdd|84537 : 232.0) no description available & (reliability: 1354.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf03240_173118-178828' '(p12424|glna_nicpl : 674.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 660.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 563.0) no description available & (gnl|cdd|84537 : 225.0) no description available & (reliability: 1320.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf03734_190594-204546' '(at3g53180 : 1090.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (gnl|cdd|30523 : 300.0) no description available & (gnl|cdd|35902 : 133.0) no description available & (reliability: 2180.0) & (original description: Putative GSI, Description = Glutamine synthetase, PFAM = PF04909;PF00120)' T
'12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf04063_83668-110580' '(at3g53180 : 134.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (gnl|cdd|30523 : 81.1) no description available & (reliability: 268.0) & (original description: Putative GSI, Description = Glutamate-ammonia ligase-like protein, PFAM = PF00120)' T
'12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'nbv0.3scaffold7965_33636-54561' '(at4g25840 : 389.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 244.0) no description available & (gnl|cdd|30982 : 136.0) no description available & (reliability: 778.0) & (original description: Putative GPP2, Description = (DL)-glycerol-3-phosphatase 2, PFAM = PF13419)' T
'12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'nbv0.3scaffold9882_3794-13824' '(at4g25840 : 293.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 198.0) no description available & (gnl|cdd|30982 : 100.0) no description available & (reliability: 586.0) & (original description: Putative pudp, Description = Pseudouridine-5'-monophosphatase, PFAM = PF13419)' T
'12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'niben101scf01438_917875-945247' '(at4g25840 : 392.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 246.0) no description available & (gnl|cdd|30982 : 136.0) no description available & (reliability: 784.0) & (original description: Putative GPP2, Description = (DL)-glycerol-3-phosphatase 2, PFAM = PF13419)' T
'12.2.1001' 'N-metabolism.ammonia metabolism' 'ammonium' 'N-metabolism.ammonia metabolism' M
'12.2.1002' 'N-metabolism.ammonia metabolism' 'glutamate' 'N-metabolism.ammonia metabolism; amino acid synthesis.alanine; amino acid degradation.alanine; amino acid synthesis.isoleucine; amino acid degradation.isoleucine; amino acid synthesis.leucineamino acid degradation.leucine; amino acid synthesis.lysine; amino acid degradation.lysine; amino acid synthesis.phenylalanine; amino acid synthesis.proline; amino acid degradation.proline; amino acid synthesis.arginine; amino acid degradation.arginine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine; amino acid synthesis.valine; amino acid degradation.valine; amino acid degradation.hydroxyproline; amino acid synthesis.asparagine; amino acid degradation.asparagines; amino acid degradation.cysteine; amino acid synthesis.glutamate; amino acid degradation.glutamate; amino acid synthesis.glutamine; amino acid degradation.glutamine; amino acid synthesis.histidine; Co-factor metabolism; tetrapyrrole synthesis; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M
'12.2.1003' 'N-metabolism.ammonia metabolism' 'glutamine' 'N-metabolism.ammonia metabolism; amino acid synthesis.arginine; amino acid synthesis.tryptophan; amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.glutamine; amino acid degradation.glutamine; amino acid synthesis.histidine; nucleotide metabolism.synthesis; nucleotide metabolism.degradation; C1-metabolism' M
'12.3' 'N-metabolism.N-degradation' '' ''
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'nbv0.3scaffold11864_3574-6831' '(q9lec8|dheb_nicpl : 829.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 750.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 508.0) no description available & (gnl|cdd|30682 : 448.0) no description available & (reliability: 1500.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF02812;PF00208)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben044scf00024595ctg000_766-9099' '(at1g51720 : 930.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (gnl|cdd|82980 : 498.0) no description available & (gnl|cdd|37461 : 440.0) no description available & (p52596|dhe3_vitvi : 143.0) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) - Vitis vinifera (Grape) & (reliability: 1860.0) & (original description: Putative gdh, Description = Glutamate dehydrogenase, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf00293_215770-231650' '(at1g51720 : 1031.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (gnl|cdd|82980 : 541.0) no description available & (gnl|cdd|37461 : 485.0) no description available & (p52596|dhe3_vitvi : 142.0) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) - Vitis vinifera (Grape) & (reliability: 2062.0) & (original description: Putative gdhA, Description = Glutamate dehydrogenase, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf02015_157345-162109' '(q9lec8|dheb_nicpl : 845.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 767.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 523.0) no description available & (gnl|cdd|30682 : 461.0) no description available & (reliability: 1534.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf03679_490877-496815' '(o04937|dhea_nicpl : 838.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 766.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 514.0) no description available & (gnl|cdd|30682 : 475.0) no description available & (reliability: 1532.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf07048_273025-277755' '(q9lec8|dheb_nicpl : 792.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 771.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 525.0) no description available & (gnl|cdd|30682 : 460.0) no description available & (reliability: 1542.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf08179_273771-280847' '(o04937|dhea_nicpl : 801.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 755.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 513.0) no description available & (gnl|cdd|30682 : 481.0) no description available & (reliability: 1510.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF02812;PF00208)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf09205_114984-120847' '(o04937|dhea_nicpl : 808.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 775.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 507.0) no description available & (gnl|cdd|30682 : 468.0) no description available & (reliability: 1550.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF00208;PF02812)' T
'12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf12318_91655-98448' '(q9lec8|dheb_nicpl : 788.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 764.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 516.0) no description available & (gnl|cdd|30682 : 453.0) no description available & (reliability: 1528.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF02812;PF00208)' T
'12.4' 'N-metabolism.misc' 'nbv0.3scaffold37582_15291-20639' '(at5g67220 : 580.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37546 : 406.0) no description available & (gnl|cdd|73368 : 282.0) no description available & (reliability: 1160.0) & (original description: Putative DUS1L, Description = tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like, PFAM = PF01207)' T
'12.4' 'N-metabolism.misc' 'niben044scf00038372ctg000_2284-6800' '(at3g49645 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At3g49645, Description = Putative uncharacterized protein T9C5.230, PFAM = )' T
'12.4' 'N-metabolism.misc' 'niben101scf00682_427137-432554' '(at3g49645 : 172.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At3g49645, Description = , PFAM = )' T
'12.4' 'N-metabolism.misc' 'niben101scf01692_674993-680344' '(at5g67220 : 577.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37546 : 404.0) no description available & (gnl|cdd|73368 : 283.0) no description available & (reliability: 1154.0) & (original description: Putative DUS1L, Description = tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like, PFAM = PF01207)' T
'12.4' 'N-metabolism.misc' 'niben101scf03264_484513-498698' '(at3g63510 : 575.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink). & (gnl|cdd|83990 : 352.0) no description available & (gnl|cdd|37546 : 310.0) no description available & (reliability: 1126.0) & (original description: Putative dusA, Description = tRNA-dihydrouridine(20/20a) synthase, PFAM = PF01207)' T
'12.4' 'N-metabolism.misc' 'niben101scf04703_864695-871466' '(at1g02020 : 779.0) nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48388 : 110.0) no description available & (reliability: 1558.0) & (original description: Putative amb0269, Description = Nitroreductase, PFAM = PF00881)' T
'12.4' 'N-metabolism.misc' 'niben101scf04875_745940-750974' '(at3g49645 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At3g49645, Description = Putative uncharacterized protein T9C5.230, PFAM = )' T
'12.4' 'N-metabolism.misc' 'niben101scf05552_837487-840055' '(at1g21840 : 323.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein F (UREF); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreF (InterPro:IPR002639); Has 962 Blast hits to 961 proteins in 436 species: Archae - 16; Bacteria - 785; Metazoa - 9; Fungi - 76; Plants - 41; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|31172 : 112.0) no description available & (reliability: 646.0) & (original description: Putative ureF, Description = Putative urease accessory protein F, PFAM = PF01730)' T
'12.4' 'N-metabolism.misc' 'niben101scf11657_231737-239458' '(at3g63510 : 423.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink). & (gnl|cdd|83990 : 302.0) no description available & (gnl|cdd|37546 : 261.0) no description available & (reliability: 834.0) & (original description: Putative dusA, Description = tRNA dihydrouridine synthase A, PFAM = PF01207)' T
'12.4' 'N-metabolism.misc' 'niben101scf21301_27363-31281' '(at3g49640 : 98.6) Aldolase-type TIM barrel family protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT5G67220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37545 : 81.2) no description available & (reliability: 197.2) & (original description: Putative dus2, Description = tRNA-dihydrouridine synthase, PFAM = )' T
'12.4' 'N-metabolism.misc' 'niben101scf21301_28645-43532' '(at3g49640 : 501.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT5G67220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37545 : 314.0) no description available & (gnl|cdd|73368 : 260.0) no description available & (reliability: 1002.0) & (original description: Putative dus2l, Description = tRNA-dihydrouridine synthase, PFAM = PF01207)' T
'13' 'amino acid metabolism' 'niben101scf01863_361464-366565' '(at5g65890 : 486.0) Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques.; ACT domain repeat 1 (ACR1); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT-like superfamily protein (TAIR:AT5G25320.1); Has 728 Blast hits to 694 proteins in 163 species: Archae - 0; Bacteria - 318; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|80394 : 125.0) no description available & (reliability: 972.0) & (original description: Putative ACR1, Description = ACT domain-containing protein ACR1, PFAM = PF01842)' T
'13' 'amino acid metabolism' 'niben101scf02634_17207-26157' '(at5g04740 : 330.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: uridylyltransferase-related (TAIR:AT1G16880.1). & (reliability: 660.0) & (original description: Putative ACR12, Description = ACT domain-containing protein ACR12, PFAM = )' T
'13' 'amino acid metabolism' 'niben101scf03413_318526-327813' '(at5g04740 : 335.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: uridylyltransferase-related (TAIR:AT1G16880.1). & (reliability: 670.0) & (original description: Putative ACR11, Description = DS12 from 2D-PAGE of leaf protein, putative, PFAM = )' T
'13' 'amino acid metabolism' 'niben101scf11078_67955-73364' '(at5g25320 : 563.0) ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 3 (TAIR:AT1G76990.5); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80396 : 124.0) no description available & (reliability: 1126.0) & (original description: Putative ACR2, Description = ACT domain-containing protein ACR2, PFAM = PF01842)' T
'13.1' 'amino acid metabolism.synthesis' '' ''
'13.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism' '' ''
'13.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA' '' ''
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101ctg13733_1-2139' '(q07346|dce_pethy : 281.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at5g17330 : 275.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36597 : 199.0) no description available & (gnl|cdd|84666 : 138.0) no description available & (reliability: 550.0) & (original description: Putative gad, Description = Glutamate decarboxylase, PFAM = PF00282)' T
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf00440_156950-160649' '(q07346|dce_pethy : 297.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at2g02000 : 271.0) glutamate decarboxylase 3 (GAD3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2817 Blast hits to 2814 proteins in 863 species: Archae - 192; Bacteria - 1666; Metazoa - 146; Fungi - 354; Plants - 282; Viruses - 7; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36597 : 186.0) no description available & (gnl|cdd|30425 : 93.9) no description available & (reliability: 542.0) & (original description: Putative gad1, Description = Glutamate decarboxylase, PFAM = PF00282)' T
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf01241_223069-231863' '(at2g02010 : 880.0) glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (q07346|dce_pethy : 867.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (gnl|cdd|36597 : 593.0) no description available & (gnl|cdd|30425 : 350.0) no description available & (reliability: 1760.0) & (original description: Putative GAD4, Description = Glutamate decarboxylase 4, PFAM = PF00282)' T
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf01958_502939-522722' '(q07346|dce_pethy : 879.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at5g17330 : 867.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36597 : 598.0) no description available & (gnl|cdd|30425 : 363.0) no description available & (reliability: 1734.0) & (original description: Putative GAD, Description = Glutamate decarboxylase, PFAM = PF00282)' T
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf02395_310169-322832' '(q07346|dce_pethy : 952.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at2g02010 : 874.0) glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|36597 : 606.0) no description available & (gnl|cdd|30425 : 366.0) no description available & (reliability: 1748.0) & (original description: Putative GAD, Description = Glutamate decarboxylase, PFAM = PF00282)' T
'13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf02698_30431-37217' '(at5g17330 : 751.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q07346|dce_pethy : 751.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (gnl|cdd|36597 : 539.0) no description available & (gnl|cdd|30425 : 357.0) no description available & (reliability: 1502.0) & (original description: Putative gad1, Description = Glutamate decarboxylase, PFAM = PF00282)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.3scaffold19392_5354-17263' '(at3g22200 : 262.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 183.0) no description available & (gnl|cdd|36618 : 158.0) no description available & (reliability: 524.0) & (original description: Putative bioA, Description = Putative aminotransferase y4uB, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.5scaffold6379_47807-65378' '(at3g22200 : 765.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 612.0) no description available & (gnl|cdd|36618 : 496.0) no description available & (reliability: 1530.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.5scaffold9780_9919-13668' '(at3g22200 : 319.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 245.0) no description available & (gnl|cdd|36618 : 188.0) no description available & (reliability: 638.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben044scf00017218ctg030_4333-9672' '(at3g22200 : 179.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 101.0) no description available & (gnl|cdd|36618 : 93.0) no description available & (reliability: 358.0) & (original description: Putative pAMT, Description = Putative aminotransferase y4uB, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben044scf00031004ctg003_7299-11357' '(at3g22200 : 348.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 278.0) no description available & (gnl|cdd|36618 : 203.0) no description available & (reliability: 696.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf02437_12665-32742' '(at3g22200 : 718.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 587.0) no description available & (gnl|cdd|36618 : 462.0) no description available & (reliability: 1436.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf02807_1176922-1185246' '(at3g22200 : 825.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 625.0) no description available & (gnl|cdd|36618 : 510.0) no description available & (reliability: 1650.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf04464_157654-163786' '(at3g22200 : 576.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 467.0) no description available & (gnl|cdd|36618 : 366.0) no description available & (reliability: 1152.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf06933_274284-283600' '(at3g22200 : 752.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 590.0) no description available & (gnl|cdd|36618 : 458.0) no description available & (p45621|gsa_soybn : 87.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Glycine max (Soybean) & (reliability: 1504.0) & (original description: Putative pAMT, Description = Putative aminotransferase, PFAM = PF00202)' T
'13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf12662_58744-69387' '(at3g22200 : 783.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 630.0) no description available & (gnl|cdd|36618 : 512.0) no description available & (reliability: 1566.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T
'13.1.1.1.3' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.SSADH' '' ''
'13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'nbv0.3scaffold64610_5949-9520' '(at1g17650 : 243.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 158.0) no description available & (gnl|cdd|32267 : 131.0) no description available & (reliability: 486.0) & (original description: Putative ghr, Description = Putative oxidoreductase GLYR1, PFAM = PF14833)' T
'13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'niben101scf02078_933356-940786' '(at1g17650 : 448.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 291.0) no description available & (gnl|cdd|32267 : 252.0) no description available & (reliability: 896.0) & (original description: Putative GLYR2, Description = Glyoxylate/succinic semialdehyde reductase 2, chloroplastic, PFAM = PF14833;PF03446)' T
'13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'niben101scf02831_577726-584802' '(at1g17650 : 448.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 305.0) no description available & (gnl|cdd|32267 : 265.0) no description available & (reliability: 896.0) & (original description: Putative GLYR2, Description = Glyoxylate/succinic semialdehyde reductase 2, chloroplastic, PFAM = PF14833;PF03446)' T
'13.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate' '' ''
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben044scf00031050ctg000_124-6409' '(at4g31990 : 716.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 534.0) no description available & (gnl|cdd|82888 : 473.0) no description available & (p37833|aatc_orysa : 448.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative ASP5, Description = Aspartate aminotransferase, chloroplastic, PFAM = PF00155;PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf03164_690549-696733' '(p28734|aatc_dauca : 737.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 717.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36625 : 635.0) no description available & (gnl|cdd|82888 : 525.0) no description available & (reliability: 1434.0) & (original description: Putative got2, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf04437_15362-22221' '(at4g31990 : 751.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 584.0) no description available & (gnl|cdd|82888 : 522.0) no description available & (p37833|aatc_orysa : 469.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1502.0) & (original description: Putative ASP5, Description = Aspartate aminotransferase, chloroplastic, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf06016_199027-207265' '(at2g22250 : 613.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81751 : 414.0) no description available & (gnl|cdd|35478 : 383.0) no description available & (reliability: 1226.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf07926_549862-560703' '(at4g31990 : 774.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 576.0) no description available & (gnl|cdd|82888 : 515.0) no description available & (p37833|aatc_orysa : 480.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1548.0) & (original description: Putative aspartate aminotransferase 2, Description = Aspartate aminotransferase 2, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09082_44214-50934' '(at2g30970 : 747.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36625 : 609.0) no description available & (gnl|cdd|31637 : 492.0) no description available & (p28011|aat1_medsa : 424.0) Aspartate aminotransferase 1 (EC 2.6.1.1) (Transaminase A) - Medicago sativa (Alfalfa) & (reliability: 1494.0) & (original description: Putative ASP1, Description = Aspartate aminotransferase, mitochondrial, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09832_39857-49168' '(at5g11520 : 740.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37833|aatc_orysa : 717.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (gnl|cdd|36625 : 633.0) no description available & (gnl|cdd|82888 : 521.0) no description available & (reliability: 1480.0) & (original description: Putative ASP3, Description = Aspartate aminotransferase 3, chloroplastic, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09997_45813-52475' '(p28734|aatc_dauca : 707.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 691.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36625 : 635.0) no description available & (gnl|cdd|82888 : 527.0) no description available & (reliability: 1382.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf13777_713-7774' '(at2g22250 : 577.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81751 : 410.0) no description available & (gnl|cdd|35478 : 380.0) no description available & (reliability: 1154.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.1.2.1001' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate' 'aspartate' 'amino acid synthesis.homoserine; amino acid synthesis.lysine; amino acid synthesis.arginine; amino acid degradation.arginine; amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.aspartate; amino acid degradation.aspartate; amino acid synthesis.glutamate; amino acid degradation.glutamate; Co-factor metabolism; nucleotide metabolism.synthesis' M
'13.1.1.3' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine' '' ''
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'nbv0.3scaffold72518_571-8236' '(at1g17290 : 791.0) Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia; alanine aminotransferas (AlaAT1); FUNCTIONS IN: L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to hypoxia, L-alanine catabolic process, by transamination; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferase 2 (TAIR:AT1G72330.1); Has 28241 Blast hits to 28232 proteins in 2888 species: Archae - 752; Bacteria - 19527; Metazoa - 637; Fungi - 692; Plants - 1303; Viruses - 0; Other Eukaryotes - 5330 (source: NCBI BLink). & (p52894|ala2_horvu : 716.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 639.0) no description available & (gnl|cdd|30785 : 207.0) no description available & (reliability: 1582.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'nbv0.5scaffold320_916490-924169' '(at1g17290 : 816.0) Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia; alanine aminotransferas (AlaAT1); FUNCTIONS IN: L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to hypoxia, L-alanine catabolic process, by transamination; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferase 2 (TAIR:AT1G72330.1); Has 28241 Blast hits to 28232 proteins in 2888 species: Archae - 752; Bacteria - 19527; Metazoa - 637; Fungi - 692; Plants - 1303; Viruses - 0; Other Eukaryotes - 5330 (source: NCBI BLink). & (p52894|ala2_horvu : 748.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 662.0) no description available & (gnl|cdd|30785 : 208.0) no description available & (reliability: 1632.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben044scf00001174ctg009_2610-10374' '(at1g72330 : 795.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 722.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 643.0) no description available & (gnl|cdd|30785 : 210.0) no description available & (reliability: 1590.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf00747_1094310-1101882' '(at1g72330 : 818.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 750.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 663.0) no description available & (gnl|cdd|30785 : 208.0) no description available & (reliability: 1636.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf00870_332531-339972' '(at1g72330 : 822.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 754.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 666.0) no description available & (gnl|cdd|30785 : 211.0) no description available & (reliability: 1644.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf03823_183628-249135' '(at1g72330 : 840.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 761.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 674.0) no description available & (gnl|cdd|30785 : 215.0) no description available & (reliability: 1680.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T
'13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'nbv0.3scaffold61045_438-11344' '(at3g08860 : 756.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 620.0) no description available & (gnl|cdd|30509 : 435.0) no description available & (q6yze2|gsa_orysa : 85.1) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1484.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben044scf00020016ctg002_13221-27037' '(at4g39660 : 814.0) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,; alanine:glyoxylate aminotransferase 2 (AGT2); FUNCTIONS IN: zinc ion binding, alanine-glyoxylate transaminase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36618 : 615.0) no description available & (gnl|cdd|75392 : 426.0) no description available & (q6yze2|gsa_orysa : 89.7) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1628.0) & (original description: Putative AGT2, Description = Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial, PFAM = PF00202)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf04011_42544-49949' '(at4g39660 : 789.0) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,; alanine:glyoxylate aminotransferase 2 (AGT2); FUNCTIONS IN: zinc ion binding, alanine-glyoxylate transaminase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|75392 : 428.0) no description available & (q6yze2|gsa_orysa : 91.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1578.0) & (original description: Putative AGT2, Description = Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial, PFAM = PF00202)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf12528_15590-23004' '(at3g08860 : 752.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|30509 : 432.0) no description available & (q39566|gsa_chlre : 84.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 1484.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T
'13.1.1.3.10001' 'amino acid synthesis.alanine' 'alanine' 'amino acid synthesis.alanine; amino acid degradation.alanine; amino acid degradation.tryptophan; Co-factor metabolism; fermentation' M
'13.1.2' 'amino acid metabolism.synthesis.glutamate family' '' ''
'13.1.2.1' 'amino acid metabolism.synthesis.glutamate family.glutamine' '' ''
'13.1.2.2' 'amino acid metabolism.synthesis.glutamate family.proline' '' ''
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.3scaffold50960_1-6376' '(o04015|p5cs_actch : 400.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at3g55610 : 392.0) encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner.; delta 1-pyrroline-5-carboxylate synthase 2 (P5CS2); FUNCTIONS IN: oxidoreductase activity, catalytic activity, glutamate 5-kinase activity; INVOLVED IN: hyperosmotic salinity response, proline biosynthetic process, response to abscisic acid stimulus, embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta1-pyrroline-5-carboxylate synthase 1 (TAIR:AT2G39800.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39367 : 352.0) no description available & (gnl|cdd|30364 : 236.0) no description available & (reliability: 784.0) & (original description: Putative p5cs, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = )' T
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.3scaffold84018_677-6422' '(gnl|cdd|58622 : 386.0) no description available & (o04015|p5cs_actch : 362.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (gnl|cdd|36369 : 332.0) no description available & (at2g39800 : 326.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 652.0) & (original description: Putative proB, Description = Glutamate 5-kinase, PFAM = PF00696)' T
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.5scaffold107_1327446-1338681' '(o04015|p5cs_actch : 1061.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 976.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 610.0) no description available & (gnl|cdd|30364 : 440.0) no description available & (reliability: 1952.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00696;PF00171)' T
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf03801_34290-51357' '(o04015|p5cs_actch : 253.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 250.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 230.0) no description available & (gnl|cdd|30364 : 167.0) no description available & (reliability: 500.0) & (original description: Putative p5cs, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = )' T
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf06910_597821-609215' '(o04015|p5cs_actch : 1063.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 977.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 613.0) no description available & (gnl|cdd|30364 : 444.0) no description available & (reliability: 1954.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00171;PF00696)' T
'13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf09452_66475-93335' '(o04015|p5cs_actch : 1119.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 1027.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 615.0) no description available & (gnl|cdd|30364 : 442.0) no description available & (reliability: 2054.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00171;PF00696)' T
'13.1.2.2.2' 'amino acid metabolism.synthesis.glutamate family.proline.pyrroline-5-carboxylate reductase' '' ''
'13.1.2.2.3' 'amino acid metabolism.synthesis.glutamate family.proline.pyrroline-2-carboxylate reductase' '' ''
'13.1.2.2.4' 'amino acid metabolism.synthesis.glutamate family.proline.ornithin-cyclodeaminase' '' ''
'13.1.2.2.10' 'amino acid metabolism.synthesis.glutamate family.proline.ornithine aminotransferase' '' ''
'13.1.2.2.1001' 'amino acid metabolism.synthesis.glutamate family.proline' 'proline' 'amino acid synthesis.proline; amino acid degradation.proline; stress' M
'13.1.2.3' 'amino acid metabolism.synthesis.glutamate family.arginine' '' ''
'13.1.2.3.1' 'amino acid metabolism.synthesis.glutamate family.arginine.N-acetyl-L-glutamate 5-phosphotransferase' '' ''
'13.1.2.3.2' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase' 'niben044scf00005802ctg002_5454-16546' '(at2g37500 : 593.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73147 : 477.0) no description available & (gnl|cdd|37997 : 464.0) no description available & (reliability: 1186.0) & (original description: Putative argJ, Description = Arginine biosynthesis bifunctional protein ArgJ, PFAM = PF01960)' T
'13.1.2.3.2' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase' 'niben101scf00582_123023-136369' '(at2g37500 : 605.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73147 : 485.0) no description available & (gnl|cdd|37997 : 474.0) no description available & (reliability: 1210.0) & (original description: Putative argJ, Description = Arginine biosynthesis bifunctional protein ArgJ, PFAM = PF01960)' T
'13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'nbv0.5scaffold3790_116867-124664' '(at2g19940 : 557.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 554.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 444.0) no description available & (gnl|cdd|39555 : 352.0) no description available & (reliability: 1114.0) & (original description: Putative argC, Description = AGPR, PFAM = PF02774;PF01118)' T
'13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'niben044scf00015946ctg004_2853-5487' '(at2g19940 : 139.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 138.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 124.0) no description available & (gnl|cdd|39555 : 84.3) no description available & (reliability: 278.0) & (original description: Putative argC, Description = AGPR, PFAM = PF01118)' T
'13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'niben101scf02406_101955-110966' '(at2g19940 : 559.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 555.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 451.0) no description available & (gnl|cdd|39555 : 354.0) no description available & (reliability: 1118.0) & (original description: Putative argC, Description = AGPR, PFAM = PF02774;PF01118)' T
'13.1.2.3.4' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase' 'nbv0.3scaffold19546_28858-34250' '(at1g80600 : 655.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|34597 : 483.0) no description available & (gnl|cdd|36615 : 421.0) no description available & (q85wb7|gsa_brana : 121.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Brassica napus (Rape) & (reliability: 1310.0) & (original description: Putative AG118, Description = Acetylornithine aminotransferase, mitochondrial, PFAM = PF00202)' T
'13.1.2.3.4' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase' 'niben101scf00714_851897-874248' '(at1g80600 : 654.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|34597 : 481.0) no description available & (gnl|cdd|36615 : 422.0) no description available & (q85wb7|gsa_brana : 121.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Brassica napus (Rape) & (reliability: 1308.0) & (original description: Putative AG118, Description = Acetylornithine aminotransferase, mitochondrial, PFAM = PF00202)' T
'13.1.2.3.5' 'amino acid metabolism.synthesis.glutamate family.arginine.N2-Acetylornithine deacetylase' '' ''
'13.1.2.3.11' 'amino acid metabolism.synthesis.glutamate family.arginine.carbamoyl-phosphate synthase' '' ''
'13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben044scf00016540ctg007_5496-10056' '(q43814|otc_pea : 557.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 551.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 454.0) no description available & (gnl|cdd|30427 : 421.0) no description available & (reliability: 1102.0) & (original description: Putative OTC, Description = Ornithine carbamoyltransferase, chloroplastic, PFAM = PF02729;PF00185)' T
'13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf02594_657428-665346' '(at1g75330 : 563.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (q43814|otc_pea : 559.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (gnl|cdd|36717 : 465.0) no description available & (gnl|cdd|30427 : 414.0) no description available & (reliability: 1126.0) & (original description: Putative OTC, Description = Ornithine carbamoyltransferase, chloroplastic, PFAM = PF00185;PF02729)' T
'13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf04113_342586-347774' '(q43814|otc_pea : 554.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 552.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 459.0) no description available & (gnl|cdd|30427 : 424.0) no description available & (reliability: 1104.0) & (original description: Putative argF, Description = Ornithine carbamoyltransferase, PFAM = PF02729;PF00185)' T
'13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf04629_291623-301648' '(q43814|otc_pea : 555.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 553.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 463.0) no description available & (gnl|cdd|30427 : 413.0) no description available & (reliability: 1106.0) & (original description: Putative ArgF, Description = Plastid ornithine carbamoyltransferase, PFAM = PF02729;PF10584;PF00185;PF00227)' T
'13.1.2.3.22' 'amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase' 'niben101scf05330_34357-48634' '(at4g24830 : 747.0) arginosuccinate synthase family; FUNCTIONS IN: argininosuccinate synthase activity, ATP binding; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Argininosuccinate synthase, conserved site (InterPro:IPR018223), Argininosuccinate synthase (InterPro:IPR001518); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80693 : 652.0) no description available & (gnl|cdd|36918 : 558.0) no description available & (reliability: 1494.0) & (original description: Putative argG, Description = Argininosuccinate synthase, PFAM = PF00764)' T
'13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'nbv0.3scaffold31476_8589-12387' '(at5g10920 : 377.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 335.0) no description available & (gnl|cdd|80763 : 311.0) no description available & (p22675|arly_chlre : 165.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 754.0) & (original description: Putative argH, Description = ASAL, PFAM = PF14698;PF00206)' T
'13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben044scf00000769ctg016_2635-5716' '(at5g10920 : 319.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 298.0) no description available & (gnl|cdd|80763 : 276.0) no description available & (p22675|arly_chlre : 138.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 638.0) & (original description: Putative argH, Description = ASAL, PFAM = PF00206;PF14698)' T
'13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben044scf00037921ctg002_1263-7867' '(at5g10920 : 584.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 482.0) no description available & (gnl|cdd|80763 : 475.0) no description available & (p22675|arly_chlre : 252.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 1168.0) & (original description: Putative argH, Description = Argininosuccinate lyase, PFAM = PF00206)' T
'13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben101scf03403_308668-341342' '(at5g10920 : 776.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 654.0) no description available & (gnl|cdd|80763 : 631.0) no description available & (p22675|arly_chlre : 321.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 1552.0) & (original description: Putative argH, Description = ASAL, PFAM = PF14698;PF00206)' T
'13.1.2.3.31' 'amino acid metabolism.synthesis.glutamate family.arginine.aspartate racemase' 'niben101scf07829_286821-290284' '(at1g15410 : 318.0) aspartate-glutamate racemase family; FUNCTIONS IN: racemase and epimerase activity, acting on amino acids and derivatives; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Asp/Glu/hydantoin racemase (InterPro:IPR015942), Aspartate racemase (InterPro:IPR004380), Asp/Glu racemase (InterPro:IPR001920); Has 2436 Blast hits to 2424 proteins in 674 species: Archae - 57; Bacteria - 1708; Metazoa - 0; Fungi - 2; Plants - 35; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|31979 : 105.0) no description available & (reliability: 636.0) & (original description: Putative LOC100193653, Description = Asp/Glu racemase isoform 1, PFAM = PF01177)' T
'13.1.2.3.32' 'amino acid metabolism.synthesis.glutamate family.arginine.aspartate 4-decarboxylase' '' ''
'13.1.2.3.1001' 'amino acid metabolism.synthesis.glutamate family.arginine' 'ornithine' 'amino acid synthesis.arginine; amino acid degradation.arginine; amino acid degradation.glutamate; polyamine metabolism' M
'13.1.2.3.1002' 'amino acid metabolism.synthesis.glutamate family.arginine' 'arginine' 'amino acid synthesis.arginine; amino acid degradation.arginine; amino acid degradation.glutamate; polyamine metabolism' M
'13.1.2.3.1003' 'amino acid metabolism.synthesis.glutamate family.arginine' 'citrulline' 'amino acid synthesis.arginine; amino acid degradation.arginine' M
'13.1.2.3.1004' 'amino acid metabolism.synthesis.glutamate family.arginine' 'n-acetylglutamic acid' '' M
'13.1.3' 'amino acid metabolism.synthesis.aspartate family' '' ''
'13.1.3.1' 'amino acid metabolism.synthesis.aspartate family.asparagine' '' ''
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'nbv0.3scaffold14571_11144-18515' '(at2g03667 : 707.0) Asparagine synthase family protein; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35793 : 314.0) no description available & (gnl|cdd|48484 : 147.0) no description available & (reliability: 1414.0) & (original description: Putative ASN4, Description = Glutamine-dependent asparagine synthetase 4, PFAM = PF00733;PF13537)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'nbv0.3scaffold38698_13694-19286' '(at3g47340 : 1036.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p31752|asns_aspof : 1034.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35791 : 888.0) no description available & (gnl|cdd|82993 : 814.0) no description available & (reliability: 2072.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF13537;PF00733)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben044scf00016272ctg009_1-2364' '(at5g10240 : 179.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (q43011|asns_orysa : 178.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (gnl|cdd|35791 : 164.0) no description available & (gnl|cdd|82993 : 139.0) no description available & (reliability: 358.0) & (original description: Putative as3, Description = Asparagine synthetase B, PFAM = PF00733)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben044scf00018307ctg002_3807-11300' '(q43011|asns_orysa : 732.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (at5g10240 : 726.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (gnl|cdd|35791 : 662.0) no description available & (gnl|cdd|82993 : 613.0) no description available & (reliability: 1452.0) & (original description: Putative asnB, Description = Asparagine synthetase B, PFAM = PF00733)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf01936_720399-741719' '(at5g10240 : 991.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (q43011|asns_orysa : 974.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (gnl|cdd|35791 : 895.0) no description available & (gnl|cdd|82993 : 825.0) no description available & (reliability: 1982.0) & (original description: Putative sas3, Description = Asparagine synthetase, type III, PFAM = PF00733;PF13537)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf05880_332291-339942' '(p31752|asns_aspof : 1035.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (at3g47340 : 1026.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|35791 : 887.0) no description available & (gnl|cdd|82993 : 830.0) no description available & (reliability: 2052.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF00733;PF13537)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf07188_22563-29934' '(at2g03667 : 635.0) Asparagine synthase family protein; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35793 : 284.0) no description available & (gnl|cdd|48484 : 146.0) no description available & (reliability: 1270.0) & (original description: Putative ASN4, Description = Glutamine-dependent asparagine synthetase 4, PFAM = PF00733;PF13537)' T
'13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf11860_47359-53315' '(at3g47340 : 1034.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p31752|asns_aspof : 1033.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35791 : 890.0) no description available & (gnl|cdd|82993 : 814.0) no description available & (reliability: 2068.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF00733;PF13537)' T
'13.1.3.1.1001' 'amino acid metabolism.synthesis.aspartate family.asparagine' 'asparagine' 'amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.aspartate; amino acid degradation.aspartate' M
'13.1.3.2' 'amino acid metabolism.synthesis.aspartate family.threonine' '' ''
'13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf00747_214983-219448' '(q9mt28|thrc_soltu : 954.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 849.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 319.0) no description available & (reliability: 1698.0) & (original description: Putative thrC, Description = ThrC protein, PFAM = PF00291)' T
'13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf00870_1527492-1532353' '(q9mt28|thrc_soltu : 977.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 859.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 322.0) no description available & (reliability: 1718.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T
'13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf02831_120116-123681' '(q9mt28|thrc_soltu : 1011.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 877.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 328.0) no description available & (reliability: 1754.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T
'13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf04018_934330-939266' '(q9mt28|thrc_soltu : 811.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 808.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 325.0) no description available & (reliability: 1616.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T
'13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf13950_35310-41024' '(q9mt28|thrc_soltu : 1004.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 872.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 327.0) no description available & (reliability: 1744.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T
'13.1.3.2.1001' 'amino acid metabolism.synthesis.aspartate family.threonine' 'threonine' 'amino acid synthesis.isoleucine; amino acid metabolism.threonine; amino acid synthesis.threonine; amino acid degradation.threonine' M
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold9327_23716-29142' '(q42699|mete_catro : 370.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 357.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 344.0) no description available & (gnl|cdd|81472 : 328.0) no description available & (reliability: 714.0) & (original description: Putative met1, Description = Methionine synthase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold68684_1-7313' '(at4g38800 : 324.0) methylthioadenosine nucleosidase 1 (MTN1); FUNCTIONS IN: catalytic activity, methylthioadenosine nucleosidase activity; INVOLVED IN: L-methionine salvage from methylthioadenosine, nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G34840.1); Has 2898 Blast hits to 2898 proteins in 1272 species: Archae - 0; Bacteria - 2765; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|81647 : 81.7) no description available & (reliability: 648.0) & (original description: Putative MTN1, Description = 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1, PFAM = PF01048)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold113382_1-2652' '(q42699|mete_catro : 519.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 508.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 468.0) no description available & (gnl|cdd|81472 : 346.0) no description available & (reliability: 1016.0) & (original description: Putative met, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1430.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1378.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00054_171753-177211' '(q42699|mete_catro : 1357.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1328.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1327.0) no description available & (gnl|cdd|81472 : 1158.0) no description available & (reliability: 2656.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00135_42046-48673' '(at4g38800 : 335.0) methylthioadenosine nucleosidase 1 (MTN1); FUNCTIONS IN: catalytic activity, methylthioadenosine nucleosidase activity; INVOLVED IN: L-methionine salvage from methylthioadenosine, nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G34840.1); Has 2898 Blast hits to 2898 proteins in 1272 species: Archae - 0; Bacteria - 2765; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|81647 : 84.0) no description available & (reliability: 670.0) & (original description: Putative MTN1, Description = 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1, PFAM = PF01048)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1432.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1384.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf01812_227634-233047' '(q42699|mete_catro : 1354.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1337.0) no description available & (at5g17920 : 1326.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1169.0) no description available & (reliability: 2652.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1394.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1438.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf03634_472618-478040' '(q42699|mete_catro : 1383.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1346.0) no description available & (at5g17920 : 1339.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1171.0) no description available & (reliability: 2678.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1442.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf05629_213814-227267' '(at5g17920 : 360.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (q42699|mete_catro : 358.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 348.0) no description available & (gnl|cdd|81472 : 337.0) no description available & (reliability: 720.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf07438_445537-452199' '(q42699|mete_catro : 1377.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1355.0) no description available & (at5g17920 : 1349.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1177.0) no description available & (reliability: 2698.0) & (original description: Putative MS1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1, PFAM = PF08267;PF01717)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf09725_82734-88458' '(q42699|mete_catro : 1365.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1335.0) no description available & (at5g17920 : 1334.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1161.0) no description available & (reliability: 2668.0) & (original description: Putative metE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf09813_22663-31618' '(q42699|mete_catro : 1390.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1371.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1323.0) no description available & (gnl|cdd|81472 : 1178.0) no description available & (reliability: 2742.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1368.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T
'13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'nbv0.5scaffold1805_199656-205984' '(at3g01120 : 720.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 480.0) no description available & (gnl|cdd|35276 : 444.0) no description available & (reliability: 1440.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T
'13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben044scf00002367ctg021_4378-11283' '(at3g01120 : 630.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 406.0) no description available & (gnl|cdd|35276 : 378.0) no description available & (reliability: 1260.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T
'13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben044scf00023314ctg000_1-6529' '(at3g01120 : 706.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 482.0) no description available & (gnl|cdd|35276 : 447.0) no description available & (reliability: 1412.0) & (original description: Putative cys, Description = Cystathionine-gamma-synthase, PFAM = PF01053)' T
'13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben101scf00136_358019-365633' '(at3g01120 : 716.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 487.0) no description available & (gnl|cdd|35276 : 452.0) no description available & (reliability: 1432.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T
'13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben101scf06457_35286-41589' '(at3g01120 : 711.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 479.0) no description available & (gnl|cdd|35276 : 443.0) no description available & (reliability: 1422.0) & (original description: Putative metC, Description = Cystathionine gamma-lyase, PFAM = PF01053)' T
'13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'nbv0.3scaffold26168_18745-27148' '(at3g57050 : 179.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 140.0) no description available & (gnl|cdd|35276 : 115.0) no description available & (reliability: 358.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T
'13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'nbv0.5scaffold2587_182464-190483' '(at3g57050 : 628.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 487.0) no description available & (gnl|cdd|35276 : 416.0) no description available & (reliability: 1256.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T
'13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf03006_615988-633824' '(at3g57050 : 613.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 469.0) no description available & (gnl|cdd|35276 : 396.0) no description available & (reliability: 1226.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T
'13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf05535_419906-424202' '(at3g57050 : 430.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 327.0) no description available & (gnl|cdd|35276 : 279.0) no description available & (reliability: 860.0) & (original description: Putative mccB, Description = Cystathionine beta-lyase, PFAM = PF01053)' T
'13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf08333_808480-831538' '(at3g57050 : 637.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 498.0) no description available & (gnl|cdd|35276 : 420.0) no description available & (reliability: 1274.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'nbv0.3scaffold9327_23716-29142' '(q42699|mete_catro : 370.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 357.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 344.0) no description available & (gnl|cdd|81472 : 328.0) no description available & (reliability: 708.0) & (original description: Putative met1, Description = Methionine synthase, PFAM = PF01717;PF08267)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'nbv0.3scaffold113382_1-2652' '(q42699|mete_catro : 519.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 508.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 468.0) no description available & (gnl|cdd|81472 : 346.0) no description available & (reliability: 992.0) & (original description: Putative met, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf00054_171753-177211' '(q42699|mete_catro : 1357.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1328.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1327.0) no description available & (gnl|cdd|81472 : 1158.0) no description available & (reliability: 2630.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf01812_227634-233047' '(q42699|mete_catro : 1354.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1337.0) no description available & (at5g17920 : 1326.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1169.0) no description available & (reliability: 2634.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf03634_472618-478040' '(q42699|mete_catro : 1383.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1346.0) no description available & (at5g17920 : 1339.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1171.0) no description available & (reliability: 2652.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf05629_213814-227267' '(at5g17920 : 360.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (q42699|mete_catro : 358.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 348.0) no description available & (gnl|cdd|81472 : 337.0) no description available & (reliability: 708.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf07438_445537-452199' '(q42699|mete_catro : 1377.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1355.0) no description available & (at5g17920 : 1349.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1177.0) no description available & (reliability: 2676.0) & (original description: Putative MS1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1, PFAM = PF08267;PF01717)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf09725_82734-88458' '(q42699|mete_catro : 1365.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1335.0) no description available & (at5g17920 : 1334.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1161.0) no description available & (reliability: 2646.0) & (original description: Putative metE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T
'13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf09813_22663-31618' '(q42699|mete_catro : 1390.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1371.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1323.0) no description available & (gnl|cdd|81472 : 1178.0) no description available & (reliability: 2710.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1364.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1444.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1366.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1458.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1470.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1358.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1382.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T
'13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1414.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.3scaffold37990_6113-17689' '(at3g60910 : 296.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 138.0) no description available & (reliability: 592.0) & (original description: Putative BnaC08g31050D, Description = BnaC08g31050D protein, PFAM = PF13649)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.5scaffold2_1630728-1636887' '(at3g63250 : 380.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 331.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 277.0) no description available & (gnl|cdd|36792 : 261.0) no description available & (reliability: 760.0) & (original description: Putative mmuM, Description = Homocysteine methyltransferase, PFAM = PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.5scaffold1613_4201-17282' '(at3g60910 : 353.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 165.0) no description available & (reliability: 706.0) & (original description: Putative BnaCnng13390D, Description = BnaCnng13390D protein, PFAM = PF08241)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben044scf00009528ctg013_347-6610' '(at3g63250 : 429.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 380.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 307.0) no description available & (gnl|cdd|36792 : 280.0) no description available & (reliability: 858.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574;PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben044scf00057669ctg000_2541-6408' '(at3g60910 : 285.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 134.0) no description available & (reliability: 570.0) & (original description: Putative PGSC0003DMG400006770, Description = Methyltransferase-like protein 13, PFAM = PF13649)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf00199_229989-234236' '(at3g60910 : 296.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 148.0) no description available & (reliability: 592.0) & (original description: Putative AlNc14C21G2217, Description = Putative methyltransferase, PFAM = PF08241)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf01982_346879-351638' '(at3g25900 : 525.0) HMT-1; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1). & (q9fun0|hmt1_maize : 462.0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (ZmHMT-1) - Zea mays (Maize) & (gnl|cdd|83039 : 359.0) no description available & (gnl|cdd|36792 : 339.0) no description available & (reliability: 1050.0) & (original description: Putative mmuM, Description = Homocysteine methyltransferase, PFAM = PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf02059_587073-614899' '(at2g41040 : 420.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G78140.1); Has 8121 Blast hits to 8118 proteins in 1828 species: Archae - 365; Bacteria - 6420; Metazoa - 92; Fungi - 271; Plants - 324; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (gnl|cdd|87468 : 81.1) no description available & (reliability: 840.0) & (original description: Putative At2g41040, Description = Uncharacterized methyltransferase At2g41040, chloroplastic, PFAM = PF08241)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf02829_803784-811506' '(at3g63250 : 494.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum8|hmt3_maize : 444.0) Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (ZmHMT-3) - Zea mays (Maize) & (gnl|cdd|83039 : 351.0) no description available & (gnl|cdd|36792 : 334.0) no description available & (reliability: 988.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf03469_387161-393350' '(at3g63250 : 472.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 427.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 351.0) no description available & (gnl|cdd|36792 : 324.0) no description available & (reliability: 944.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf03469_387194-393335' '(at3g22740 : 422.0) homocysteine S-methyltransferase (HMT3); homocysteine S-methyltransferase 3 (HMT3); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine methyltransferase 2 (TAIR:AT3G63250.1); Has 6696 Blast hits to 6688 proteins in 1870 species: Archae - 4; Bacteria - 4184; Metazoa - 339; Fungi - 135; Plants - 163; Viruses - 0; Other Eukaryotes - 1871 (source: NCBI BLink). & (q9fum9|hmt2_maize : 372.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 301.0) no description available & (gnl|cdd|36792 : 279.0) no description available & (reliability: 844.0) & (original description: Putative HMT3, Description = Homocysteine S-methyltransferase 3, PFAM = PF02574)' T
'13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf09903_2549-14270' '(at3g60910 : 362.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 168.0) no description available & (reliability: 724.0) & (original description: Putative BnaCnng13390D, Description = BnaCnng13390D protein, PFAM = PF08241)' T
'13.1.3.4.13' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine S-methyltransferase' 'niben101scf00168_664313-671871' '(at2g43910 : 285.0) HARMLESS TO OZONE LAYER 1 (HOL1); FUNCTIONS IN: methyltransferase activity, thiopurine S-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Thiopurine S-methyltransferase (InterPro:IPR008854); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43920.3); Has 524 Blast hits to 523 proteins in 205 species: Archae - 0; Bacteria - 284; Metazoa - 0; Fungi - 78; Plants - 70; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|86933 : 174.0) no description available & (reliability: 570.0) & (original description: Putative TMT1, Description = Thiocyanate methyltransferase 1, PFAM = PF05724)' T
'13.1.3.4.13' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine S-methyltransferase' 'niben101scf00705_383321-392687' '(at5g49810 : 1560.0) Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation.; methionine S-methyltransferase (MMT); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Methyltransferase small (InterPro:IPR007848), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbc2|mmt1_horvu : 1526.0) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S-methyltransferase) (Hv-MMT1) - Hordeum vulgare (Barley) & (reliability: 3120.0) & (original description: Putative MMT1, Description = Methionine S-methyltransferase, PFAM = PF05175;PF00155)' T
'13.1.3.4.1001' 'amino acid metabolism.synthesis.aspartate family.methionine' 'o-succinylhomoserine' 'amino acid synthesis.methionine' M
'13.1.3.4.1002' 'amino acid metabolism.synthesis.aspartate family.methionine' 'cystathionine' 'amino acid synthesis.methionine' M
'13.1.3.4.1003' 'amino acid metabolism.synthesis.aspartate family.methionine' 'methionine' 'amino acid synthesis.methionine; amino acid degradation.methionine; hormone metabolism.ethylene; C1-metabolism' M
'13.1.3.5' 'amino acid metabolism.synthesis.aspartate family.lysine' '' ''
'13.1.3.5.1' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate synthase' 'niben101scf00017_439932-444367' '(q42948|dapa_tobac : 694.0) Dihydrodipicolinate synthase, chloroplast precursor (EC 4.2.1.52) (DHDPS) - Nicotiana tabacum (Common tobacco) & (at2g45440 : 576.0) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.; dihydrodipicolinate synthase (DHDPS2); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase 1 (TAIR:AT3G60880.2); Has 13334 Blast hits to 13334 proteins in 2656 species: Archae - 353; Bacteria - 9459; Metazoa - 101; Fungi - 305; Plants - 96; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|84962 : 346.0) no description available & (reliability: 1152.0) & (original description: Putative DHPS1, Description = 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, PFAM = PF00701)' T
'13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben044scf00015495ctg011_4777-14421' '(at2g44040 : 462.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT3G59890.1); Has 3366 Blast hits to 3365 proteins in 1356 species: Archae - 124; Bacteria - 2714; Metazoa - 2; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (gnl|cdd|86808 : 91.0) no description available & (reliability: 924.0) & (original description: Putative DAPB1, Description = 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic, PFAM = PF05173;PF01113)' T
'13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben101scf00812_54915-60513' '(at5g52100 : 457.0) Is essential for chloroplast NAD(P)H dehydrogenase activity, which is involved in electron transfer between PSII and PSI. Likely functions in biogenesis or stabilization of the NAD(P)H dehydrogenase complex.; chlororespiration reduction 1 (crr1); FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: photosynthesis, light reaction, lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); Has 2708 Blast hits to 2708 proteins in 1059 species: Archae - 78; Bacteria - 2168; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|80473 : 158.0) no description available & (reliability: 914.0) & (original description: Putative DAPB3, Description = Dihydrodipicolinate reductase-like protein CRR1, chloroplastic, PFAM = PF01113;PF05173)' T
'13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben101scf15156_17179-26504' '(at2g44040 : 454.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT3G59890.1); Has 3366 Blast hits to 3365 proteins in 1356 species: Archae - 124; Bacteria - 2714; Metazoa - 2; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (gnl|cdd|86808 : 90.7) no description available & (reliability: 908.0) & (original description: Putative DAPB1, Description = 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic, PFAM = PF01113;PF05173)' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'nbv0.5scaffold155_843510-851753' '(at4g33680 : 249.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 166.0) no description available & (gnl|cdd|35478 : 115.0) no description available & (reliability: 498.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = )' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben044scf00027169ctg004_1-4895' '(at4g33680 : 489.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 373.0) no description available & (gnl|cdd|35478 : 290.0) no description available & (reliability: 978.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = PF00155)' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf04547_205107-226421' '(at2g13810 : 528.0) AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink). & (gnl|cdd|82293 : 472.0) no description available & (gnl|cdd|35478 : 351.0) no description available & (reliability: 1022.0) & (original description: Putative ALD1, Description = Aminotransferase ALD1, PFAM = PF00155)' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf09157_90466-95894' '(at4g33680 : 543.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 408.0) no description available & (gnl|cdd|35478 : 324.0) no description available & (reliability: 1086.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = PF00155)' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf10158_271683-282786' '(at4g33680 : 655.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 475.0) no description available & (gnl|cdd|35478 : 363.0) no description available & (reliability: 1310.0) & (original description: Putative DAP, Description = LL-diaminopimelate aminotransferase, chloroplastic, PFAM = PF00155)' T
'13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf38634_1-793' '(at4g33680 : 83.6) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = )' T
'13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'nbv0.3scaffold32222_6850-20022' '(at3g53580 : 498.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 341.0) no description available & (reliability: 996.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T
'13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'niben101scf00067_215208-226025' '(at3g53580 : 490.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 342.0) no description available & (reliability: 980.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T
'13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'niben101scf01444_211575-228203' '(at3g53580 : 483.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 341.0) no description available & (reliability: 966.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T
'13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'nbv0.5scaffold3331_245168-251334' '(at3g14390 : 624.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (gnl|cdd|35841 : 303.0) no description available & (gnl|cdd|30369 : 251.0) no description available & (reliability: 1248.0) & (original description: Putative dpd1, Description = Diaminopimelate decarboxylase, PFAM = PF00278;PF02784)' T
'13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'niben101scf00202_506433-521014' '(at3g14390 : 823.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (gnl|cdd|35841 : 415.0) no description available & (gnl|cdd|30369 : 323.0) no description available & (reliability: 1646.0) & (original description: Putative LYSA2, Description = Diaminopimelate decarboxylase 2, chloroplastic, PFAM = PF02784;PF00278)' T
'13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'niben101scf08137_213032-216225' '(q8s3n2|dcor_capan : 383.0) Ornithine decarboxylase (EC 4.1.1.17) (ODC) (CaODC1) (CapODC) - Capsicum annuum (Bell pepper) & (gnl|cdd|35841 : 348.0) no description available & (gnl|cdd|30369 : 239.0) no description available & (at5g11880 : 102.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT3G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative odc2, Description = Ornithine decarboxylase 2, PFAM = PF00278;PF02784)' T
'13.1.3.5.6' 'amino acid metabolism.synthesis.aspartate family.lysine.2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase' '' ''
'13.1.3.5.7' 'amino acid metabolism.synthesis.aspartate family.lysine.tetrahydrodipicolinate N-acetyltransferase' '' ''
'13.1.3.5.8' 'amino acid metabolism.synthesis.aspartate family.lysine.N-acyl-l-2-amino-6-oxopimelate aminotransferase' '' ''
'13.1.3.5.9' 'amino acid metabolism.synthesis.aspartate family.lysine.N-acyl-ll-2,6-diaminopimelate deacylase' '' ''
'13.1.3.5.10' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate dehydrogenase' '' ''
'13.1.3.5.1001' 'amino acid metabolism.synthesis.aspartate family.lysine' 'lysine' 'amino acid synthesis.lysine; amino acid degradation.lysine; polyamine metabolism' M
'13.1.3.6' 'amino acid metabolism.synthesis.aspartate family.misc' '' ''
'13.1.3.6.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine' '' ''
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'nbv0.5scaffold854_222866-227381' '(at3g02020 : 487.0) encodes a monofunctional aspartate kinase; aspartate kinase 3 (AK3); CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: Aspartate kinase family protein (TAIR:AT5G14060.2); Has 11044 Blast hits to 11020 proteins in 2545 species: Archae - 256; Bacteria - 7570; Metazoa - 4; Fungi - 149; Plants - 183; Viruses - 0; Other Eukaryotes - 2882 (source: NCBI BLink). & (gnl|cdd|35677 : 464.0) no description available & (gnl|cdd|30873 : 248.0) no description available & (p49080|akh2_maize : 137.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 974.0) & (original description: Putative lysC, Description = Aspartokinase, PFAM = PF00696)' T
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00014538ctg002_9303-15921' '(at5g14060 : 794.0) lysine-sensitive aspartate kinase; CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink). & (gnl|cdd|35677 : 742.0) no description available & (gnl|cdd|58610 : 417.0) no description available & (p49079|akh1_maize : 184.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 1588.0) & (original description: Putative AK2, Description = Aspartokinase 2, chloroplastic, PFAM = PF00696)' T
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00015664ctg006_1-1808' '(p37142|akh_dauca : 187.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at1g31230 : 185.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (gnl|cdd|35676 : 123.0) no description available & (gnl|cdd|83022 : 93.0) no description available & (reliability: 370.0) & (original description: Putative ahd1, Description = Homoserine dehydrogenase, PFAM = PF00742)' T
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00015664ctg010_1-4233' '(at1g31230 : 373.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (p49080|akh2_maize : 369.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (gnl|cdd|82998 : 243.0) no description available & (gnl|cdd|35676 : 183.0) no description available & (reliability: 746.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF03447;PF00742)' T
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben101scf00927_257827-288067' '(at5g13280 : 782.0) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH).; aspartate kinase 1 (AK-LYS1); FUNCTIONS IN: aspartate kinase activity; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35677 : 737.0) no description available & (gnl|cdd|58610 : 414.0) no description available & (p49079|akh1_maize : 178.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 1564.0) & (original description: Putative AK2, Description = Aspartokinase 2, chloroplastic, PFAM = PF00696)' T
'13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben101scf06848_46721-61622' '(p37142|akh_dauca : 1439.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at4g19710 : 1410.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82998 : 715.0) no description available & (gnl|cdd|35676 : 321.0) no description available & (reliability: 2780.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF13840;PF00742;PF03447;PF01842;PF00696)' T
'13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben044scf00014538ctg001_3648-6188' '(at1g14810 : 242.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 179.0) no description available & (gnl|cdd|81990 : 177.0) no description available & (reliability: 484.0) & (original description: Putative asd, Description = ASA dehydrogenase, PFAM = PF01118)' T
'13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben044scf00038253ctg003_292-6349' '(at1g14810 : 540.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 410.0) no description available & (gnl|cdd|81990 : 391.0) no description available & (reliability: 1080.0) & (original description: Putative asd, Description = Aspartate-semialdehyde dehydrogenase, PFAM = PF02774;PF01118)' T
'13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben101scf02114_50443-53030' '(at1g14810 : 239.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 176.0) no description available & (gnl|cdd|81990 : 173.0) no description available & (reliability: 478.0) & (original description: Putative asd, Description = ASA dehydrogenase, PFAM = PF01118)' T
'13.1.3.6.1.3' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine dehydrogenase' 'niben101scf01383_539781-564531' '(at5g21060 : 508.0) Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: homoserine dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, aspartate family amino acid biosynthetic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine dehydrogenase, short (InterPro:IPR022697), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 7513 Blast hits to 7513 proteins in 2318 species: Archae - 181; Bacteria - 5355; Metazoa - 3; Fungi - 163; Plants - 133; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|35676 : 411.0) no description available & (gnl|cdd|82998 : 258.0) no description available & (p37142|akh_dauca : 167.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (reliability: 1016.0) & (original description: Putative hom, Description = Homoserine dehydrogenase, PFAM = PF00742)' T
'13.1.3.6.1.4' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase' 'nbv0.3scaffold8467_10364-12860' '(at2g17265 : 415.0) Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.; homoserine kinase (HSK); FUNCTIONS IN: homoserine kinase activity; INVOLVED IN: methionine biosynthetic process, threonine biosynthetic process, response to fungus, response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Homoserine kinase (InterPro:IPR000870), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: homoserine kinase, putative / HSK, putative (TAIR:AT4G35295.1); Has 6092 Blast hits to 6088 proteins in 1935 species: Archae - 296; Bacteria - 4868; Metazoa - 7; Fungi - 124; Plants - 47; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36750 : 318.0) no description available & (gnl|cdd|80839 : 239.0) no description available & (reliability: 830.0) & (original description: Putative HSK, Description = Homoserine kinase, PFAM = PF00288;PF08544)' T
'13.1.3.6.1.4' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase' 'niben101scf12011_69446-72944' '(at2g17265 : 409.0) Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.; homoserine kinase (HSK); FUNCTIONS IN: homoserine kinase activity; INVOLVED IN: methionine biosynthetic process, threonine biosynthetic process, response to fungus, response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Homoserine kinase (InterPro:IPR000870), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: homoserine kinase, putative / HSK, putative (TAIR:AT4G35295.1); Has 6092 Blast hits to 6088 proteins in 1935 species: Archae - 296; Bacteria - 4868; Metazoa - 7; Fungi - 124; Plants - 47; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36750 : 305.0) no description available & (gnl|cdd|80839 : 243.0) no description available & (reliability: 818.0) & (original description: Putative HSK, Description = Homoserine kinase, PFAM = PF00288;PF08544)' T
'13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben044scf00015664ctg006_1-1808' '(p37142|akh_dauca : 187.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at1g31230 : 185.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (gnl|cdd|35676 : 123.0) no description available & (gnl|cdd|83022 : 93.0) no description available & (reliability: 352.0) & (original description: Putative ahd1, Description = Homoserine dehydrogenase, PFAM = PF00742)' T
'13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben044scf00015664ctg010_1-4233' '(at1g31230 : 373.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (p49080|akh2_maize : 369.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (gnl|cdd|82998 : 243.0) no description available & (gnl|cdd|35676 : 183.0) no description available & (reliability: 742.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF03447;PF00742)' T
'13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben101scf06848_46721-61622' '(p37142|akh_dauca : 1439.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at4g19710 : 1410.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82998 : 715.0) no description available & (gnl|cdd|35676 : 321.0) no description available & (reliability: 2820.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF13840;PF00742;PF03447;PF01842;PF00696)' T
'13.1.3.6.1.1001' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine' 'homoserine' 'amino acid synthesis.homoserine; amino acid degradation.homoserine; amino acid synthesis.methionine; amino acid degradation.methionine; amino acid metabolism.threonine; amino acid synthesis.threonine' M
'13.1.3.6.2' 'amino acid metabolism.synthesis.aspartate family.misc.homocysteine' '' ''
'13.1.3.6.2.1001' 'amino acid metabolism.synthesis.aspartate family.misc.homocysteine' 'homocysteine' 'amino acid synthesis.homocysteine' M
'13.1.4' 'amino acid metabolism.synthesis.branched chain group' '' ''
'13.1.4.1' 'amino acid metabolism.synthesis.branched chain group.common' '' ''
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold11164_1054-9910' '(at5g16290 : 446.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 263.0) no description available & (gnl|cdd|84024 : 195.0) no description available & (reliability: 892.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF13710;PF01842;PF10369)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold11164_1056-12695' '(at2g31810 : 600.0) ACT domain-containing small subunit of acetolactate synthase protein; FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: VALINE-TOLERANT 1 (TAIR:AT5G16290.2); Has 11866 Blast hits to 6122 proteins in 1974 species: Archae - 228; Bacteria - 7362; Metazoa - 4; Fungi - 258; Plants - 114; Viruses - 0; Other Eukaryotes - 3900 (source: NCBI BLink). & (gnl|cdd|37874 : 259.0) no description available & (gnl|cdd|84024 : 194.0) no description available & (reliability: 1200.0) & (original description: Putative VAT1, Description = Acetolactate synthase small subunit 1, chloroplastic, PFAM = PF10369;PF10369;PF13710;PF01842)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold48079_1487-5499' '(p09342|ilv1_tobac : 1217.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 1026.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 837.0) no description available & (gnl|cdd|82763 : 633.0) no description available & (reliability: 2052.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF00205;PF02775)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold55222_3267-8333' '(at5g16290 : 216.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 170.0) no description available & (gnl|cdd|84024 : 163.0) no description available & (reliability: 432.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF01842;PF10369)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold61937_4283-9238' '(p09342|ilv1_tobac : 1097.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 992.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 815.0) no description available & (gnl|cdd|82763 : 627.0) no description available & (reliability: 1984.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF02775;PF00205)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05032_29504-33501' '(p09114|ilv2_tobac : 1233.0) Acetolactate synthase 2, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase II) (Acetohydroxy-acid synthase II) (ALS II) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 1013.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 843.0) no description available & (gnl|cdd|82763 : 639.0) no description available & (reliability: 2026.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF00205;PF02775)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05649_643945-654737' '(at2g31810 : 601.0) ACT domain-containing small subunit of acetolactate synthase protein; FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: VALINE-TOLERANT 1 (TAIR:AT5G16290.2); Has 11866 Blast hits to 6122 proteins in 1974 species: Archae - 228; Bacteria - 7362; Metazoa - 4; Fungi - 258; Plants - 114; Viruses - 0; Other Eukaryotes - 3900 (source: NCBI BLink). & (gnl|cdd|37874 : 261.0) no description available & (gnl|cdd|84024 : 196.0) no description available & (reliability: 1202.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF10369;PF10369;PF01842;PF13710)' T
'13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05721_21744-42184' '(at5g16290 : 602.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 264.0) no description available & (gnl|cdd|84024 : 201.0) no description available & (reliability: 1204.0) & (original description: Putative VAT1, Description = Acetolactate synthase small subunit 1, chloroplastic, PFAM = PF01842;PF13710;PF10369;PF10369)' T
'13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben044scf00007978ctg008_19386-26297' '(at3g58610 : 873.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (q01292|ilv5_spiol : 859.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Spinacia oleracea (Spinach) & (gnl|cdd|30408 : 162.0) no description available & (reliability: 1746.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T
'13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben044scf00011932ctg015_815-8204' '(at3g58610 : 933.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 911.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 185.0) no description available & (reliability: 1866.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T
'13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf01710_174242-181031' '(at3g58610 : 908.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 900.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 179.0) no description available & (reliability: 1816.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF01450;PF01450;PF07991)' T
'13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf03628_1398992-1406283' '(at3g58610 : 931.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 910.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 183.0) no description available & (reliability: 1862.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T
'13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf04110_67208-75552' '(at3g58610 : 930.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 913.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 186.0) no description available & (reliability: 1860.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 912.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1050.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1110.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf01267_7869-12654' '(at1g10070 : 520.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 410.0) no description available & (gnl|cdd|81992 : 327.0) no description available & (reliability: 1040.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf02348_905784-914291' '(at1g10070 : 471.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 386.0) no description available & (gnl|cdd|81992 : 313.0) no description available & (reliability: 942.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 906.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04843_12864-20690' '(at1g10070 : 464.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 389.0) no description available & (gnl|cdd|81992 : 304.0) no description available & (reliability: 928.0) & (original description: Putative BCAT6, Description = Branched-chain-amino-acid aminotransferase 6, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04884_112078-119759' '(at5g65770 : 474.0) LITTLE NUCLEI4 (LINC4); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2). & (gnl|cdd|35383 : 92.2) no description available & (reliability: 932.0) & (original description: Putative CRWN4, Description = Protein CROWDED NUCLEI 4, PFAM = )' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T
'13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 916.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'13.1.4.3' 'amino acid metabolism.synthesis.branched chain group.valine specific' '' ''
'13.1.4.3.1001' 'amino acid metabolism.synthesis.branched chain group.valine specific' 'valine' 'amino acid synthesis.valine; amino acid degradation.valine' M
'13.1.4.4' 'amino acid metabolism.synthesis.branched chain group.leucine specific' '' ''
'13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01077_404579-412431' '(at1g74040 : 565.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (gnl|cdd|80776 : 546.0) no description available & (q39891|leu1_soybn : 499.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|37578 : 479.0) no description available & (reliability: 1130.0) & (original description: Putative aksA, Description = Trans-homoaconitate synthase, PFAM = PF00682)' T
'13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01681_222196-244053' '(at1g74040 : 874.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (q39891|leu1_soybn : 701.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|80776 : 698.0) no description available & (gnl|cdd|37578 : 650.0) no description available & (reliability: 1748.0) & (original description: Putative IPMSA, Description = 2-isopropylmalate synthase A, PFAM = PF00682;PF08502)' T
'13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01681_420689-429322' '(at1g74040 : 548.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (gnl|cdd|80776 : 543.0) no description available & (q39891|leu1_soybn : 486.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|37578 : 462.0) no description available & (reliability: 1096.0) & (original description: Putative aksA, Description = 2-isopropylmalate synthase, PFAM = PF00682)' T
'13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf08892_30496-44302' '(at1g74040 : 889.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (q39891|leu1_soybn : 721.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|80776 : 701.0) no description available & (gnl|cdd|37578 : 657.0) no description available & (reliability: 1778.0) & (original description: Putative IPMSB, Description = 2-isopropylmalate synthase B, PFAM = PF08502;PF00682)' T
'13.1.4.4.2' 'amino acid metabolism.synthesis.branched chain group.leucine specific.isopropylmalate isomerase' '' ''
'13.1.4.4.3' 'amino acid metabolism.synthesis.branched chain group.leucine specific.3-isopropylmalate dehydrogenase' 'niben044scf00024661ctg003_3997-12266' '(at1g80560 : 599.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 588.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|36005 : 538.0) no description available & (gnl|cdd|80743 : 535.0) no description available & (reliability: 1198.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T
'13.1.4.4.3' 'amino acid metabolism.synthesis.branched chain group.leucine specific.3-isopropylmalate dehydrogenase' 'niben101scf01899_760268-770046' '(at1g80560 : 627.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 617.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|80743 : 541.0) no description available & (gnl|cdd|36005 : 537.0) no description available & (reliability: 1254.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T
'13.1.4.4.4' 'amino acid metabolism.synthesis.branched chain group.leucine specific.aminotransferase' '' ''
'13.1.4.4.1001' 'amino acid metabolism.synthesis.branched chain group.leucine specific' 'leucine' 'amino acid synthesis.leucine; amino acid degradation.leucine' M
'13.1.4.5' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific' 'niben101scf03374_904385-910084' '(at4g11640 : 433.0) Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases.; serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink). & (gnl|cdd|36465 : 416.0) no description available & (gnl|cdd|31364 : 310.0) no description available & (q39469|thd1_cicar : 126.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 866.0) & (original description: Putative ilvA, Description = Serine racemase, PFAM = PF00291)' T
'13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'nbv0.5scaffold2044_323973-354333' '(gnl|cdd|82867 : 156.0) no description available & (at3g10050 : 139.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 115.0) no description available & (q39469|thd1_cicar : 110.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 278.0) & (original description: Putative ilvA, Description = L-threonine dehydratase, PFAM = PF00291)' T
'13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf00111_23088-64518' '(gnl|cdd|82867 : 718.0) no description available & (at3g10050 : 684.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 477.0) no description available & (q39469|thd1_cicar : 403.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 1368.0) & (original description: Putative OMR1, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T
'13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf00682_433265-440607' '(gnl|cdd|82867 : 693.0) no description available & (at3g10050 : 611.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (q39469|thd1_cicar : 498.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36464 : 443.0) no description available & (reliability: 1222.0) & (original description: Putative TD, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T
'13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf02502_1439058-1458325' '(gnl|cdd|82867 : 736.0) no description available & (at3g10050 : 728.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 484.0) no description available & (q39469|thd1_cicar : 416.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 1456.0) & (original description: Putative OMR1, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T
'13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf03481_30-4986' '(gnl|cdd|82867 : 458.0) no description available & (q39469|thd1_cicar : 386.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (at3g10050 : 379.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 342.0) no description available & (reliability: 758.0) & (original description: Putative ilvA, Description = L-threonine dehydratase, PFAM = PF00585;PF00291;PF00291)' T
'13.1.4.5.1001' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific' 'isoleucine' 'amino acid synthesis.isoleucine; amino acid degradation.isoleucine' M
'13.1.5' 'amino acid metabolism.synthesis.serine-glycine-cysteine group' '' ''
'13.1.5.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine' '' ''
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'nbv0.5scaffold3397_287790-294304' '(at4g34200 : 795.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 541.0) no description available & (gnl|cdd|84741 : 368.0) no description available & (p13443|dhgy_cucsa : 96.7) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1590.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF00389;PF02826;PF01842)' T
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben044scf00034661ctg001_7604-13635' '(at4g34200 : 813.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 545.0) no description available & (gnl|cdd|84741 : 373.0) no description available & (q07511|fdh_soltu : 102.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 1626.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF02826;PF01842;PF00389)' T
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf00234_65288-70459' '(at1g17745 : 864.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (gnl|cdd|35291 : 546.0) no description available & (gnl|cdd|84741 : 371.0) no description available & (p13443|dhgy_cucsa : 107.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1728.0) & (original description: Putative PGDH2, Description = D-3-phosphoglycerate dehydrogenase 2, chloroplastic, PFAM = PF02826;PF00389;PF01842)' T
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf06896_1303-15173' '(at4g34200 : 813.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 547.0) no description available & (gnl|cdd|84741 : 373.0) no description available & (q07511|fdh_soltu : 102.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 1626.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF02826;PF00389;PF01842)' T
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf07741_84030-88905' '(at1g17745 : 855.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (gnl|cdd|35291 : 546.0) no description available & (gnl|cdd|84741 : 371.0) no description available & (p13443|dhgy_cucsa : 109.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1710.0) & (original description: Putative PGDH2, Description = D-3-phosphoglycerate dehydrogenase 2, chloroplastic, PFAM = PF00389;PF02826;PF01842)' T
'13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf09379_170009-175012' '(at4g34200 : 791.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 539.0) no description available & (gnl|cdd|84741 : 366.0) no description available & (p13443|dhgy_cucsa : 99.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1582.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF00389;PF01842;PF02826)' T
'13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'nbv0.3scaffold54418_1761-5071' '(at4g35630 : 622.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 596.0) no description available & (gnl|cdd|38001 : 580.0) no description available & (p52877|serc_spiol : 559.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1244.0) & (original description: Putative PSAT1, Description = Phosphoserine aminotransferase 1, chloroplastic, PFAM = PF00266)' T
'13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'nbv0.5scaffold372_261730-265040' '(at4g35630 : 619.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 594.0) no description available & (gnl|cdd|38001 : 579.0) no description available & (p52877|serc_spiol : 563.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1238.0) & (original description: Putative psat, Description = Phosphoserine aminotransferase, PFAM = PF00266)' T
'13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'niben044scf00020258ctg009_1128-4526' '(at4g35630 : 620.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 594.0) no description available & (gnl|cdd|38001 : 579.0) no description available & (p52877|serc_spiol : 560.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1240.0) & (original description: Putative PSAT1, Description = Phosphoserine aminotransferase 1, chloroplastic, PFAM = PF00266)' T
'13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'niben101scf06263_117108-120612' '(at2g17630 : 584.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: phosphoserine aminotransferase (TAIR:AT4G35630.1); Has 5143 Blast hits to 5141 proteins in 1794 species: Archae - 74; Bacteria - 3425; Metazoa - 166; Fungi - 141; Plants - 61; Viruses - 0; Other Eukaryotes - 1276 (source: NCBI BLink). & (gnl|cdd|81544 : 558.0) no description available & (gnl|cdd|38001 : 542.0) no description available & (p52877|serc_spiol : 526.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1168.0) & (original description: Putative psat, Description = Phosphohydroxythreonine aminotransferase, PFAM = PF00266)' T
'13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'nbv0.5scaffold7449_15239-23482' '(at1g18640 : 280.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 254.0) no description available & (gnl|cdd|30906 : 103.0) no description available & (reliability: 560.0) & (original description: Putative aay, Description = Phosphoserine phosphatase, PFAM = PF00702)' T
'13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'niben101scf09973_15245-24070' '(at1g18640 : 346.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 293.0) no description available & (gnl|cdd|30906 : 105.0) no description available & (reliability: 692.0) & (original description: Putative PSPH, Description = Phosphoserine phosphatase, PFAM = PF00702)' T
'13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'niben101scf10384_13505-23111' '(at1g18640 : 349.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 296.0) no description available & (gnl|cdd|30906 : 104.0) no description available & (reliability: 698.0) & (original description: Putative PSP, Description = Phosphoserine phosphatase, chloroplastic, PFAM = PF00702)' T
'13.1.5.1.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine' 'serine' 'PS.photorepiration; lipid metabolism; amino acid degradation.homoserine; amino acid synthesis.serine; amino acid degradation.serine; amino acid degradation.methionine; S-assimilation' M
'13.1.5.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine' '' ''
'13.1.5.2.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine hydroxymethyltransferase' '' ''
'13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T
'13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T
'13.1.5.2.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'13.1.5.2.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T
'13.1.5.2.11' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.threonine aldolase' '' ''
'13.1.5.2.31' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.2-amino-3-ketobutyrate coenzym A ligase' '' ''
'13.1.5.2.41' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.sarcosine oxidase' 'niben044scf00040894ctg000_862-4278' '(at2g24580 : 526.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: sarcosine oxidase activity; INVOLVED IN: tetrahydrofolate metabolic process, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Sarcosine oxidase, monomeric (InterPro:IPR006281); Has 4031 Blast hits to 4005 proteins in 935 species: Archae - 135; Bacteria - 2670; Metazoa - 148; Fungi - 247; Plants - 60; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). & (gnl|cdd|38031 : 382.0) no description available & (gnl|cdd|83803 : 233.0) no description available & (reliability: 1052.0) & (original description: Putative At2g24580, Description = Probable sarcosine oxidase, PFAM = PF01266)' T
'13.1.5.2.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine' 'glycine' 'PS.photorepiration; amino acid synthesis.serine; amino acid synthesis.glycine; amino acid degradation.glycine; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M
'13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'nbv0.3scaffold69793_4835-8029' '(at5g65720 : 731.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 539.0) no description available & (gnl|cdd|36762 : 512.0) no description available & (reliability: 1462.0) & (original description: Putative NFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T
'13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold1597_89633-95540' '(at1g18490 : 322.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|71286 : 277.0) no description available & (gnl|cdd|39482 : 254.0) no description available & (reliability: 644.0) & (original description: Putative PCO3, Description = Plant cysteine oxidase 3, PFAM = PF07847)' T
'13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben044scf00000255ctg004_343-3763' '(at5g65720 : 734.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 544.0) no description available & (gnl|cdd|36762 : 511.0) no description available & (reliability: 1468.0) & (original description: Putative NIFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T
'13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben101scf02990_219551-222918' '(at5g65720 : 734.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 541.0) no description available & (gnl|cdd|36762 : 510.0) no description available & (reliability: 1468.0) & (original description: Putative NIFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T
'13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben101scf23752_23507-29409' '(at1g18490 : 323.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|71286 : 283.0) no description available & (gnl|cdd|39482 : 259.0) no description available & (reliability: 646.0) & (original description: Putative PCO3, Description = Plant cysteine oxidase 3, PFAM = PF07847)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben044scf00061791ctg001_2915-8924' '(gnl|cdd|36466 : 426.0) no description available & (q00834|cysk_spiol : 405.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (at4g14880 : 390.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 357.0) no description available & (reliability: 780.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00167_57558-62553' '(o81154|cysk_soltu : 334.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 322.0) no description available & (at4g14880 : 310.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 272.0) no description available & (reliability: 620.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00328_830791-836871' '(o81154|cysk_soltu : 505.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 467.0) no description available & (at4g14880 : 447.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 391.0) no description available & (reliability: 894.0) & (original description: Putative oas7, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00341_416281-424740' '(at1g55880 : 548.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: lyase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, metabolic process, cellular amino acid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: L-cysteine desulfhydrase 1 (TAIR:AT5G28030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36694 : 512.0) no description available & (gnl|cdd|83430 : 390.0) no description available & (q00834|cysk_spiol : 114.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (reliability: 1096.0) & (original description: Putative cys12, Description = Cysteine synthase 2, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf05118_830420-846703' '(at3g61440 : 535.0) Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.; cysteine synthase C1 (CYSC1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (gnl|cdd|36466 : 438.0) no description available & (p32260|cyskp_spiol : 399.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Spinacia oleracea (Spinach) & (gnl|cdd|30381 : 365.0) no description available & (reliability: 1070.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf05270_158024-166880' '(o81155|cyskp_soltu : 605.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (at3g59760 : 499.0) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC; O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22643 Blast hits to 22626 proteins in 2678 species: Archae - 432; Bacteria - 15847; Metazoa - 414; Fungi - 670; Plants - 570; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink). & (gnl|cdd|36466 : 486.0) no description available & (gnl|cdd|30381 : 402.0) no description available & (reliability: 998.0) & (original description: Putative oas1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf06888_194661-203110' '(o81154|cysk_soltu : 505.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 465.0) no description available & (at4g14880 : 447.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 392.0) no description available & (reliability: 894.0) & (original description: Putative oas7, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf07327_342115-347864' '(at3g61440 : 524.0) Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.; cysteine synthase C1 (CYSC1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (gnl|cdd|36466 : 440.0) no description available & (o81155|cyskp_soltu : 390.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (gnl|cdd|30381 : 362.0) no description available & (reliability: 1048.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf11383_9894-15532' '(gnl|cdd|36466 : 450.0) no description available & (q00834|cysk_spiol : 433.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (at4g14880 : 420.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 374.0) no description available & (reliability: 840.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben044scf00005435ctg007_7771-12327' '(at5g56760 : 385.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (gnl|cdd|39947 : 356.0) no description available & (gnl|cdd|83739 : 303.0) no description available & (reliability: 770.0) & (original description: Putative sat7, Description = Serine acetyltransferase 7, PFAM = PF06426;PF00132)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben044scf00018717ctg003_1-3068' '(at3g13110 : 259.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 214.0) no description available & (gnl|cdd|83739 : 171.0) no description available & (reliability: 518.0) & (original description: Putative cysE, Description = Serine acetyltransferase, PFAM = PF06426)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf00108_303948-308601' '(at5g56760 : 386.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (gnl|cdd|39947 : 357.0) no description available & (gnl|cdd|83739 : 302.0) no description available & (reliability: 772.0) & (original description: Putative sat7, Description = Serine acetyltransferase 7, PFAM = PF06426;PF00132)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf05581_77687-80874' '(at1g55920 : 399.0) Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;1 (SERAT2;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cellular response to sulfate starvation, response to cold; LOCATED IN: cytosol, chloroplast, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 24449 Blast hits to 24415 proteins in 2638 species: Archae - 407; Bacteria - 18561; Metazoa - 8; Fungi - 223; Plants - 250; Viruses - 18; Other Eukaryotes - 4982 (source: NCBI BLink). & (gnl|cdd|39947 : 347.0) no description available & (gnl|cdd|83739 : 281.0) no description available & (reliability: 774.0) & (original description: Putative sat1, Description = Serine acetyltransferase 1, PFAM = PF00132;PF06426)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf06263_184546-193415' '(at4g35640 : 418.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.; serine acetyltransferase 3;2 (SERAT3;2); CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT2G17640.1); Has 22944 Blast hits to 22937 proteins in 2578 species: Archae - 362; Bacteria - 17118; Metazoa - 7; Fungi - 225; Plants - 280; Viruses - 18; Other Eukaryotes - 4934 (source: NCBI BLink). & (gnl|cdd|39947 : 350.0) no description available & (gnl|cdd|83739 : 312.0) no description available & (reliability: 836.0) & (original description: Putative SAT2, Description = Probable serine acetyltransferase 2, PFAM = PF00132;PF06426)' T
'13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf16189_65374-68447' '(at3g13110 : 416.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 349.0) no description available & (gnl|cdd|83739 : 286.0) no description available & (reliability: 832.0) & (original description: Putative sat4, Description = Serine acetyltransferase 4, PFAM = PF06426;PF00132;PF00132)' T
'13.1.5.3.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'o-acetyl-serine' 'amino acid synthesis.cysteine; S-assimilation' M
'13.1.5.3.1002' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'adenosine 5'-phosphosulfate' 'amino acid synthesis.cysteine; S-assimilation' M
'13.1.5.3.1003' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 's-methylcysteine' 'amino acid synthesis.cysteine; S-assimilation, storage form of sulfur in the seeds of several legume species' M
'13.1.5.3.1004' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'cysteine' 'amino acid synthesis.cysteine; S-assimilation' M
'13.1.6' 'amino acid metabolism.synthesis.aromatic aa' '' ''
'13.1.6.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate' '' ''
'13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben044scf00059091ctg001_14673-19481' '(p27608|arof_tobac : 898.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 848.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1696.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T
'13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf01005_1190079-1199843' '(at4g33510 : 849.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (p37822|arog_soltu : 840.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) - Solanum tuberosum (Potato) & (gnl|cdd|65283 : 704.0) no description available & (reliability: 1698.0) & (original description: Putative DHS2, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic, PFAM = PF01474)' T
'13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf02537_385602-391369' '(p27608|arof_tobac : 1016.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 857.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 694.0) no description available & (reliability: 1714.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T
'13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf07573_46434-52423' '(p37822|arog_soltu : 973.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) - Solanum tuberosum (Potato) & (at4g39980 : 845.0) Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (DHS1); CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3797 Blast hits to 3784 proteins in 681 species: Archae - 0; Bacteria - 1224; Metazoa - 0; Fungi - 110; Plants - 172; Viruses - 0; Other Eukaryotes - 2291 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1690.0) & (original description: Putative aroF, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase, PFAM = PF01474)' T
'13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf11865_221691-227048' '(p27608|arof_tobac : 888.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 848.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1696.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T
'13.1.6.1.2' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase' 'nbv0.5scaffold1762_179680-186816' '(at5g66120 : 639.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 486.0) no description available & (gnl|cdd|35911 : 107.0) no description available & (reliability: 1278.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T
'13.1.6.1.2' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase' 'niben101scf07250_127947-135136' '(at5g66120 : 629.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 490.0) no description available & (gnl|cdd|35911 : 106.0) no description available & (reliability: 1258.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T
'13.1.6.1.3' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate dehydratase' '' ''
'13.1.6.1.4' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate dehydrogenase' '' ''
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold15020_1-8881' '(at2g21940 : 309.0) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|30188 : 157.0) no description available & (reliability: 618.0) & (original description: Putative SK, Description = Shikimate kinase, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold32627_1-4013' '(at3g26900 : 244.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 98.7) no description available & (reliability: 488.0) & (original description: Putative SKL1, Description = Probable inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold70656_2445-6587' '(at3g26900 : 215.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 87.6) no description available & (reliability: 430.0) & (original description: Putative SK2, Description = Shikimate kinase family protein, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.5scaffold3618_207085-211227' '(at3g26900 : 215.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 87.6) no description available & (reliability: 430.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben044scf00004401ctg010_13031-17361' '(at3g26900 : 238.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 99.5) no description available & (reliability: 476.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf00109_236897-241117' '(at3g26900 : 213.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 91.0) no description available & (reliability: 426.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf00578_297947-301141' '(at2g16790 : 117.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: shikimate kinase activity, kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623), Carbohydrate kinase, thermoresistant glucokinase (InterPro:IPR006001); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38564 : 111.0) no description available & (gnl|cdd|30194 : 103.0) no description available & (reliability: 234.0) & (original description: Putative gntK, Description = Gluconokinase, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf01055_96577-100719' '(at3g26900 : 241.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 95.3) no description available & (reliability: 482.0) & (original description: Putative SKL1, Description = Probable inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf01822_950149-958593' '(at2g35500 : 407.0) shikimate kinase like 2 (SKL2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate kinase (InterPro:IPR000623), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); Has 380 Blast hits to 380 proteins in 88 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative SKL2, Description = Probable inactive shikimate kinase like 2, chloroplastic, PFAM = PF04969;PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf04812_146930-153579' '(at2g35500 : 407.0) shikimate kinase like 2 (SKL2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate kinase (InterPro:IPR000623), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); Has 380 Blast hits to 380 proteins in 88 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative SKL2, Description = Probable inactive shikimate kinase like 2, chloroplastic, PFAM = PF04969;PF01202)' T
'13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf05111_66469-79240' '(at2g21940 : 311.0) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|30188 : 161.0) no description available & (reliability: 622.0) & (original description: Putative SK, Description = Shikimate kinase, chloroplastic, PFAM = PF01202)' T
'13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben044scf00000223ctg003_2895-10641' '(p23981|aroa1_tobac : 926.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 701.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 565.0) no description available & (gnl|cdd|84005 : 489.0) no description available & (reliability: 1402.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T
'13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben101scf00603_873564-876364' '(p23981|aroa1_tobac : 147.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 131.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 97.8) no description available & (reliability: 262.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T
'13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben101scf04703_1119733-1134560' '(p23981|aroa1_tobac : 956.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 738.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 570.0) no description available & (gnl|cdd|84005 : 491.0) no description available & (reliability: 1476.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T
'13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'nbv0.3scaffold1112_981-11654' '(gnl|cdd|39692 : 545.0) no description available & (at1g48850 : 527.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 517.0) no description available & (reliability: 1054.0) & (original description: Putative pco087106a, Description = Chorismate synthase, PFAM = PF01264)' T
'13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'niben101scf00409_10111-22410' '(gnl|cdd|39692 : 603.0) no description available & (at1g48850 : 588.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 562.0) no description available & (reliability: 1176.0) & (original description: Putative CS1, Description = Chorismate synthase 1, chloroplastic, PFAM = PF01264)' T
'13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'niben101scf04907_128536-140166' '(gnl|cdd|39692 : 603.0) no description available & (at1g48850 : 590.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 561.0) no description available & (reliability: 1180.0) & (original description: Putative CS1, Description = Chorismate synthase 1, chloroplastic, PFAM = PF01264)' T
'13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf00247_462459-471503' '(at3g06350 : 405.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|30518 : 249.0) no description available & (gnl|cdd|35911 : 216.0) no description available & (reliability: 810.0) & (original description: Putative sad1, Description = Shikimate dehydrogenase, PFAM = PF01488;PF08501;PF01487)' T
'13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf01740_1263967-1271760' '(at3g06350 : 474.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 257.0) no description available & (gnl|cdd|30518 : 243.0) no description available & (reliability: 948.0) & (original description: Putative sad1, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF08501)' T
'13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf02709_410461-421887' '(at3g06350 : 675.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 413.0) no description available & (gnl|cdd|30518 : 258.0) no description available & (reliability: 1350.0) & (original description: Putative aroE, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF01488;PF08501)' T
'13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf04146_171553-181321' '(at3g06350 : 470.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 276.0) no description available & (gnl|cdd|85486 : 229.0) no description available & (reliability: 940.0) & (original description: Putative aroD, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF08501)' T
'13.1.6.1.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'shikimate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M
'13.1.6.1.1002' 'amino acid metabolism.synthesis.aromatic aa.chorismate' 'chorismate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M
'13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf02572_340137-346981' '(at1g80360 : 593.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (gnl|cdd|35478 : 315.0) no description available & (gnl|cdd|81800 : 264.0) no description available & (q00257|1a12_cucma : 90.9) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1186.0) & (original description: Putative ast2, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf04547_205107-226421' '(at2g13810 : 528.0) AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink). & (gnl|cdd|82293 : 472.0) no description available & (gnl|cdd|35478 : 351.0) no description available & (reliability: 1056.0) & (original description: Putative ALD1, Description = Aminotransferase ALD1, PFAM = PF00155)' T
'13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf18107_3598-10616' '(at1g80360 : 591.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (gnl|cdd|35478 : 316.0) no description available & (gnl|cdd|81800 : 264.0) no description available & (q00257|1a12_cucma : 86.7) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1182.0) & (original description: Putative ast2, Description = Aspartate aminotransferase, PFAM = PF00155)' T
'13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'nbv0.5scaffold2438_172706-189990' '(gnl|cdd|36014 : 306.0) no description available & (at5g10870 : 278.0) Encodes chorismate mutase AtCM2.; chorismate mutase 2 (CM2); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative cm, Description = Chorismate mutase, PFAM = )' T
'13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'niben101scf04763_225506-228017' '(gnl|cdd|36014 : 162.0) no description available & (at3g29200 : 161.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative cm, Description = Chorismate mutase, PFAM = )' T
'13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'niben101scf06026_184023-190567' '(gnl|cdd|36014 : 392.0) no description available & (at3g29200 : 373.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative CM1, Description = Chorismate mutase 1, chloroplastic, PFAM = )' T
'13.1.6.2.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.glutamate—prephenate aminotransferase' '' ''
'13.1.6.3' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' '' ''
'13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'nbv0.3scaffold34193_7830-11116' '(at1g08250 : 583.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 523.0) no description available & (gnl|cdd|30426 : 286.0) no description available & (reliability: 1166.0) & (original description: Putative pd2, Description = Arogenate dehydratase, PFAM = PF00800)' T
'13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf05382_27031-30329' '(at1g08250 : 582.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 522.0) no description available & (gnl|cdd|30426 : 282.0) no description available & (reliability: 1164.0) & (original description: Putative pheA, Description = Prephenate dehydratase, PFAM = PF00800)' T
'13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf05656_95009-99828' '(at1g08250 : 580.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 521.0) no description available & (gnl|cdd|30426 : 285.0) no description available & (reliability: 1160.0) & (original description: Putative pd2, Description = Arogenate dehydratase, PFAM = PF00800)' T
'13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf08991_135560-144115' '(at1g11790 : 537.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 1 (ADT1); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 2 (TAIR:AT3G07630.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38008 : 447.0) no description available & (gnl|cdd|30426 : 288.0) no description available & (reliability: 1074.0) & (original description: Putative ADT1, Description = Arogenate dehydratase/prephenate dehydratase 1, chloroplastic, PFAM = PF00800)' T
'13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf14634_255705-263871' '(at3g07630 : 493.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 2 (ADT2); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Amino acid-binding ACT (InterPro:IPR002912), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 1 (TAIR:AT1G11790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38008 : 434.0) no description available & (gnl|cdd|30426 : 289.0) no description available & (reliability: 986.0) & (original description: Putative pd1, Description = Arogenate dehydratase, PFAM = PF00800)' T
'13.1.6.3.1001' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'prephenate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M
'13.1.6.3.1002' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'phenylalanine' 'amino acid synthesis.phenylalanine; amino acid degradation.phenylalanine; secondary metabolism' M
'13.1.6.3.1003' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'phenylpyruvate' '' M
'13.1.6.4' 'amino acid metabolism.synthesis.aromatic aa.tyrosine' '' ''
'13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'nbv0.3scaffold24342_5108-8289' '(at1g15710 : 357.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 326.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 686.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T
'13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf10126_52949-56103' '(at1g15710 : 356.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 327.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 686.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T
'13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf10152_87742-91254' '(at5g34930 : 282.0) arogenate dehydrogenase; FUNCTIONS IN: binding, prephenate dehydrogenase (NADP+) activity, catalytic activity; INVOLVED IN: tyrosine biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: prephenate dehydrogenase family protein (TAIR:AT1G15710.1); Has 1942 Blast hits to 1528 proteins in 619 species: Archae - 162; Bacteria - 1128; Metazoa - 21; Fungi - 62; Plants - 205; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (gnl|cdd|37591 : 242.0) no description available & (gnl|cdd|30635 : 95.4) no description available & (reliability: 564.0) & (original description: Putative ADH3, Description = Arogenate dehydrogenase 3, PFAM = PF02153)' T
'13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf15958_35723-38850' '(at1g15710 : 448.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 387.0) no description available & (gnl|cdd|30635 : 116.0) no description available & (reliability: 816.0) & (original description: Putative agd1, Description = Arogenate dehydrogenase, PFAM = PF02153)' T
'13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'nbv0.3scaffold24342_5108-8289' '(at1g15710 : 357.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 326.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 714.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T
'13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'niben101scf10126_52949-56103' '(at1g15710 : 356.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 327.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 712.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T
'13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'niben101scf15958_35723-38850' '(at1g15710 : 448.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 387.0) no description available & (gnl|cdd|30635 : 116.0) no description available & (reliability: 896.0) & (original description: Putative agd1, Description = Arogenate dehydrogenase, PFAM = PF02153)' T
'13.1.6.4.3' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.tyrosine transaminase' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 650.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.1.6.4.1001' 'amino acid metabolism.synthesis.aromatic aa.tyrosine' 'tyrosine' 'amino acid synthesis.tyrosine; amino acid degradation.tyrosine; secondary metabolism; Co-factor metabolism' M
'13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'nbv0.3scaffold30851_5429-10452' '(at4g11610 : 1306.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 297.0) no description available & (reliability: 2612.0) & (original description: Putative At4g11610, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T
'13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben044scf00033877ctg007_8117-13331' '(at5g48060 : 1407.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71804 : 300.0) no description available & (reliability: 2814.0) & (original description: Putative Os04g0472900, Description = Os04g0472900 protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T
'13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf01086_118058-123081' '(at4g11610 : 1297.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 297.0) no description available & (reliability: 2594.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T
'13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf03374_879691-884767' '(at4g11610 : 1514.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 301.0) no description available & (gnl|cdd|36246 : 84.0) no description available & (reliability: 3028.0) & (original description: Putative At4g11610, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF00168;PF00168;PF00168;PF00168;PF08372)' T
'13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf03494_399148-405618' '(at5g06850 : 1338.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71804 : 296.0) no description available & (gnl|cdd|36246 : 93.3) no description available & (reliability: 2448.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.3scaffold5090_13733-22695' '(at5g05730 : 772.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 552.0) no description available & (gnl|cdd|30496 : 417.0) no description available & (reliability: 1544.0) & (original description: Putative ASA2, Description = Feedback-insensitive anthranilate synthase alpha-2 chain, PFAM = PF00425;PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.3scaffold72550_1-6633' '(at2g29690 : 822.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 603.0) no description available & (gnl|cdd|30496 : 439.0) no description available & (reliability: 1644.0) & (original description: Putative asa, Description = Anthranilate synthase alpha subunit, PFAM = PF04715;PF00425)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.5scaffold7310_29618-47149' '(gnl|cdd|36438 : 717.0) no description available & (at2g28880 : 617.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|30496 : 382.0) no description available & (reliability: 1234.0) & (original description: Putative pabB, Description = Para-aminobenzoate synthase, PFAM = PF00117;PF00117;PF04715;PF00425)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00014915ctg001_1-5051' '(at2g29690 : 604.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 454.0) no description available & (gnl|cdd|30496 : 385.0) no description available & (reliability: 1208.0) & (original description: Putative asa, Description = Anthranilate synthase component I, PFAM = PF00425;PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00014915ctg002_1-2370' '(at5g05730 : 197.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 117.0) no description available & (reliability: 394.0) & (original description: Putative asa, Description = Anthranilate synthase alpha 1, PFAM = PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00017259ctg007_2596-5011' '(at2g28880 : 174.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 121.0) no description available & (reliability: 348.0) & (original description: Putative ADCS, Description = Para-aminobenzoate synthase, PFAM = PF00117)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf00406_27581-50599' '(at2g28880 : 1033.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 807.0) no description available & (gnl|cdd|30496 : 383.0) no description available & (reliability: 2066.0) & (original description: Putative ADCS, Description = Aminodeoxychorismate synthase, chloroplastic, PFAM = PF04715;PF00117;PF00117;PF00425)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf04044_57604-66615' '(at5g05730 : 796.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 574.0) no description available & (gnl|cdd|30496 : 439.0) no description available & (reliability: 1592.0) & (original description: Putative ASA1, Description = Anthranilate synthase alpha subunit 1, chloroplastic, PFAM = PF00425;PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf05881_73427-85102' '(at2g29690 : 823.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 605.0) no description available & (gnl|cdd|30496 : 440.0) no description available & (reliability: 1646.0) & (original description: Putative asa, Description = Anthranilate synthase alpha subunit, PFAM = PF00425;PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf06465_3891-24057' '(at2g28880 : 1070.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 815.0) no description available & (gnl|cdd|30496 : 385.0) no description available & (reliability: 2140.0) & (original description: Putative ADCS, Description = Aminodeoxychorismate synthase, chloroplastic, PFAM = PF00117;PF00117;PF00425;PF04715)' T
'13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf10073_47793-55311' '(at1g25220 : 370.0) Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2).; anthranilate synthase beta subunit 1 (ASB1); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, response to ethylene stimulus, response to bacterium, auxin biosynthetic process, lateral root primordium development; LOCATED IN: chloroplast; EXPRESSED IN: pericycle, cotyledon vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase superfamily (InterPro:IPR011702), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: Glutamine amidotransferase type 1 family protein (TAIR:AT5G57890.1). & (gnl|cdd|35249 : 323.0) no description available & (gnl|cdd|30858 : 256.0) no description available & (reliability: 740.0) & (original description: Putative ASB2, Description = Anthranilate synthase beta subunit 2, chloroplastic, PFAM = PF00117)' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'nbv0.5scaffold3113_137722-149415' '(gnl|cdd|80567 : 203.0) no description available & (at5g17990 : 199.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36651 : 165.0) no description available & (reliability: 398.0) & (original description: Putative bf1, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'nbv0.5scaffold4153_110097-114822' '(at5g17990 : 454.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 367.0) no description available & (gnl|cdd|36651 : 352.0) no description available & (reliability: 908.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF02885;PF00591;PF00591)' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben044scf00014706ctg006_1104-5524' '(at5g17990 : 499.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 394.0) no description available & (gnl|cdd|36651 : 384.0) no description available & (reliability: 998.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF02885;PF00591)' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf02207_490904-504500' '(at5g17990 : 455.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 379.0) no description available & (gnl|cdd|36651 : 369.0) no description available & (reliability: 910.0) & (original description: Putative trpD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf03045_966822-979368' '(at1g70570 : 835.0) anthranilate phosphoribosyltransferase, putative; FUNCTIONS IN: anthranilate phosphoribosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Glycosyl transferase, family 3 (InterPro:IPR000312). & (gnl|cdd|30893 : 122.0) no description available & (reliability: 1670.0) & (original description: Putative BnaA02g15010D, Description = BnaA02g15010D protein, PFAM = )' T
'13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf04638_44735-50965' '(at5g17990 : 461.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 377.0) no description available & (gnl|cdd|36651 : 372.0) no description available & (reliability: 922.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T
'13.1.6.5.3' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.phosphoribosyanthranilate isomerase' 'niben101scf02764_584478-589072' '(at1g07780 : 295.0) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.; phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1). & (gnl|cdd|39403 : 204.0) no description available & (gnl|cdd|73365 : 190.0) no description available & (reliability: 590.0) & (original description: Putative PAI1, Description = N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic, PFAM = PF00697)' T
'13.1.6.5.3' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.phosphoribosyanthranilate isomerase' 'niben101scf04909_26343-33682' '(at1g07780 : 295.0) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.; phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1). & (gnl|cdd|39403 : 199.0) no description available & (gnl|cdd|73365 : 183.0) no description available & (reliability: 590.0) & (original description: Putative PAI1, Description = N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic, PFAM = PF00697)' T
'13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf01948_29124-43350' '(at5g48220 : 455.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 377.0) no description available & (gnl|cdd|80602 : 320.0) no description available & (reliability: 910.0) & (original description: Putative IGPS, Description = Indole-3-glycerol phosphate synthase, chloroplastic, PFAM = PF00218)' T
'13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf04653_293416-304269' '(at5g48220 : 475.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 367.0) no description available & (gnl|cdd|80602 : 320.0) no description available & (reliability: 950.0) & (original description: Putative trpC, Description = Indole-3-glycerol phosphate synthase, PFAM = PF00218)' T
'13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf05437_594883-607929' '(at5g48220 : 457.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 380.0) no description available & (gnl|cdd|80602 : 325.0) no description available & (reliability: 914.0) & (original description: Putative IGPS, Description = Indole-3-glycerol phosphate synthase, chloroplastic, PFAM = PF00218)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.3scaffold33390_1-5692' '(at5g54810 : 756.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 746.0) no description available & (p43284|trpb2_maize : 736.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 634.0) no description available & (reliability: 1512.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.3scaffold55804_1332-10805' '(at3g54640 : 324.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 272.0) no description available & (gnl|cdd|29424 : 264.0) no description available & (p42390|trpa_maize : 241.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 648.0) & (original description: Putative TRPA1, Description = Tryptophan synthase alpha chain, PFAM = PF00290;PF00290)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.5scaffold80_695419-700063' '(at5g28237 : 271.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process, tryptophan metabolic process; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81368 : 260.0) no description available & (p43284|trpb2_maize : 229.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 213.0) no description available & (reliability: 542.0) & (original description: Putative orp1, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.5scaffold1194_418918-453706' '(at4g02610 : 307.0) Aldolase-type TIM barrel family protein; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: tryptophan synthase alpha chain (TAIR:AT3G54640.1); Has 7706 Blast hits to 7706 proteins in 2293 species: Archae - 225; Bacteria - 4607; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2556 (source: NCBI BLink). & (gnl|cdd|29424 : 283.0) no description available & (gnl|cdd|39377 : 277.0) no description available & (p42390|trpa_maize : 228.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 614.0) & (original description: Putative trpA, Description = Tryptophan synthase alpha chain, PFAM = PF00290)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben044scf00008950ctg006_1230-9587' '(at3g54640 : 301.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 262.0) no description available & (gnl|cdd|29424 : 252.0) no description available & (p42390|trpa_maize : 204.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 602.0) & (original description: Putative MpTSA, Description = Tryptophan synthase alpha subunit, PFAM = PF00290)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf00157_426540-433378' '(at5g54810 : 756.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 739.0) no description available & (p43284|trpb2_maize : 733.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 634.0) no description available & (reliability: 1512.0) & (original description: Putative trpB, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf02541_315948-322068' '(at5g28237 : 577.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process, tryptophan metabolic process; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81368 : 572.0) no description available & (p43284|trpb2_maize : 526.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 481.0) no description available & (reliability: 1154.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf06987_144766-148693' '(at5g38530 : 781.0) tryptophan synthase beta type 2 (TSBtype2); FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain-like (InterPro:IPR006316); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84120 : 742.0) no description available & (gnl|cdd|36609 : 548.0) no description available & (p43283|trpb1_maize : 119.0) Tryptophan synthase beta chain 1 (EC 4.2.1.20) (Orange pericarp 1) (Fragment) - Zea mays (Maize) & (reliability: 1562.0) & (original description: Putative trpB, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf07980_10449-19922' '(at3g54640 : 332.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 278.0) no description available & (gnl|cdd|29424 : 268.0) no description available & (p42390|trpa_maize : 249.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 664.0) & (original description: Putative TRPA1, Description = Tryptophan synthase alpha chain, PFAM = PF00290;PF00290)' T
'13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf11724_495533-502983' '(at4g27070 : 741.0) Tryptophan synthase beta. Expressed at low levels in all tissues.; tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 718.0) no description available & (p43284|trpb2_maize : 712.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 623.0) no description available & (reliability: 1482.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T
'13.1.6.5.1001' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'tryptophan' 'amino acid synthesis.tryptophan; amino acid degradation.tryptophan; hormone metabolism.auxin' M
'13.1.6.99' 'amino acid metabolism.synthesis.aromatic aa.misc' '' ''
'13.1.7' 'amino acid metabolism.synthesis.histidine' '' ''
'13.1.7.1' 'amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase' 'niben044scf00033173ctg000_16253-24012' '(at1g09795 : 587.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|38042 : 349.0) no description available & (gnl|cdd|80689 : 193.0) no description available & (reliability: 1174.0) & (original description: Putative HISN1B, Description = ATP phosphoribosyltransferase 2, chloroplastic, PFAM = PF08029;PF01634)' T
'13.1.7.1' 'amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase' 'niben101scf03053_82744-89651' '(at1g09795 : 591.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|38042 : 349.0) no description available & (gnl|cdd|80689 : 192.0) no description available & (reliability: 1182.0) & (original description: Putative HISN1B, Description = ATP phosphoribosyltransferase 2, chloroplastic, PFAM = PF01634;PF08029)' T
'13.1.7.2' 'amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase' 'niben101scf00449_228477-232594' '(at1g31860 : 363.0) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (gnl|cdd|39512 : 246.0) no description available & (gnl|cdd|81034 : 164.0) no description available & (reliability: 726.0) & (original description: Putative HISN2, Description = Histidine biosynthesis bifunctional protein hisIE, chloroplastic, PFAM = PF01502;PF01503)' T
'13.1.7.2' 'amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase' 'niben101scf09016_18437-22212' '(at1g31860 : 366.0) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (gnl|cdd|39512 : 246.0) no description available & (gnl|cdd|81034 : 165.0) no description available & (reliability: 732.0) & (original description: Putative HISN2, Description = Histidine biosynthesis bifunctional protein hisIE, chloroplastic, PFAM = PF01502;PF01503)' T
'13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'nbv0.5scaffold55_924344-976783' '(at2g36230 : 189.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 169.0) no description available & (gnl|cdd|73385 : 87.6) no description available & (reliability: 378.0) & (original description: Putative hisA, Description = Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, PFAM = PF00977)' T
'13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'nbv0.5scaffold6152_38354-46431' '(at2g36230 : 429.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 380.0) no description available & (gnl|cdd|73385 : 181.0) no description available & (reliability: 858.0) & (original description: Putative HISN3, Description = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic, PFAM = PF00977)' T
'13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'niben101scf04954_566880-623268' '(at2g36230 : 243.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 218.0) no description available & (gnl|cdd|73385 : 101.0) no description available & (reliability: 486.0) & (original description: Putative hisA, Description = Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, PFAM = PF00977)' T
'13.1.7.4' 'amino acid metabolism.synthesis.histidine.N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase' 'niben044scf00014187ctg006_402-8230' '(at4g26900 : 832.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35842 : 727.0) no description available & (gnl|cdd|28860 : 285.0) no description available & (reliability: 1664.0) & (original description: Putative his4, Description = Imidazole glycerol phosphate synthase hisHF, PFAM = PF00977;PF00117)' T
'13.1.7.4' 'amino acid metabolism.synthesis.histidine.N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase' 'niben101scf00023_909237-921737' '(at4g26900 : 931.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35842 : 830.0) no description available & (gnl|cdd|30456 : 290.0) no description available & (reliability: 1862.0) & (original description: Putative HISN4, Description = Imidazole glycerol phosphate synthase hisHF, chloroplastic, PFAM = PF00117;PF00977)' T
'13.1.7.5' 'amino acid metabolism.synthesis.histidine.Imidazole glycerol phosphate synthase' '' ''
'13.1.7.6' 'amino acid metabolism.synthesis.histidine.imidazoleglycerol-phosphate dehydratase' 'niben101scf00058_948748-955419' '(at4g14910 : 357.0) Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis; HISTIDINE BIOSYNTHESIS 5B (HISN5B); FUNCTIONS IN: imidazoleglycerol-phosphate dehydratase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Imidazoleglycerol-phosphate dehydratase, conserved site (InterPro:IPR020565), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Imidazoleglycerol-phosphate dehydratase (InterPro:IPR000807); BEST Arabidopsis thaliana protein match is: imidazoleglycerol-phosphate dehydratase (TAIR:AT3G22425.2). & (q43072|his7_pea : 352.0) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD) - Pisum sativum (Garden pea) & (gnl|cdd|80789 : 310.0) no description available & (gnl|cdd|38353 : 294.0) no description available & (reliability: 714.0) & (original description: Putative HIS3, Description = Imidazoleglycerol-phosphate dehydratase, PFAM = PF00475)' T
'13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'nbv0.3scaffold43506_1-8328' '(o82030|his8_tobac : 729.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 561.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 411.0) no description available & (gnl|cdd|30428 : 264.0) no description available & (reliability: 1122.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155;PF00155)' T
'13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'niben101scf01107_16533-29183' '(o82030|his8_tobac : 752.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 588.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 456.0) no description available & (gnl|cdd|30428 : 297.0) no description available & (reliability: 1176.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155)' T
'13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'niben101scf03861_327644-336290' '(o82030|his8_tobac : 782.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 612.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 456.0) no description available & (gnl|cdd|30428 : 294.0) no description available & (reliability: 1224.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155)' T
'13.1.7.8' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate synthase' '' ''
'13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf04100_68262-78350' '(at5g63890 : 752.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 745.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 673.0) no description available & (gnl|cdd|85047 : 566.0) no description available & (reliability: 1504.0) & (original description: Putative HISN8, Description = Histidinol dehydrogenase, chloroplastic, PFAM = PF00815)' T
'13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf04628_13514-22399' '(at5g63890 : 710.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 706.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 662.0) no description available & (gnl|cdd|85047 : 563.0) no description available & (reliability: 1420.0) & (original description: Putative his2, Description = Histidinol dehydrogenase, PFAM = PF00815)' T
'13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf05437_13605-23047' '(at5g63890 : 737.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 731.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 660.0) no description available & (gnl|cdd|85047 : 557.0) no description available & (reliability: 1474.0) & (original description: Putative hisD, Description = Histidinol dehydrogenase, PFAM = PF00815)' T
'13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf05948_100438-110899' '(at5g63890 : 748.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 728.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 668.0) no description available & (gnl|cdd|85047 : 561.0) no description available & (reliability: 1496.0) & (original description: Putative hisD, Description = Histidinol dehydrogenase, PFAM = PF00815)' T
'13.1.7.10' 'amino acid metabolism.synthesis.histidine.imidazole glycerol phosphate synthase' '' ''
'13.1.7.11' 'amino acid metabolism.synthesis.histidine.ribose-phosphate diphosphokinase' '' ''
'13.1.7.1001' 'amino acid metabolism.synthesis.histidine' 'histidinol-p' 'amino acid synthesis.histidine' M
'13.1.7.1002' 'amino acid metabolism.synthesis.histidine' 'histidine' 'amino acid synthesis.histidine' M
'13.2' 'amino acid metabolism.degradation' '' ''
'13.2.1' 'amino acid metabolism.degradation.central amino acid metabolism' '' ''
'13.2.1.1' 'amino acid metabolism.degradation.central amino acid metabolism.GABA' '' ''
'13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'nbv0.5scaffold4089_26883-36819' '(at5g14760 : 953.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82800 : 568.0) no description available & (gnl|cdd|37614 : 551.0) no description available & (q6zdy8|dhsa_orysa : 246.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1906.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T
'13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben044scf00001064ctg029_1-3762' '(at5g14760 : 578.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37614 : 354.0) no description available & (gnl|cdd|82800 : 354.0) no description available & (q6zdy8|dhsa_orysa : 162.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1156.0) & (original description: Putative nadB, Description = L-aspartate oxidase, PFAM = PF00890;PF02910)' T
'13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben044scf00007367ctg009_4693-9863' '(at5g14760 : 939.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30379 : 556.0) no description available & (gnl|cdd|37614 : 549.0) no description available & (q6zdy8|dhsa_orysa : 240.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1878.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T
'13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben101scf00918_81365-87437' '(at5g14760 : 934.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82800 : 558.0) no description available & (gnl|cdd|37614 : 545.0) no description available & (q6zdy8|dhsa_orysa : 245.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1868.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T
'13.2.2' 'amino acid metabolism.degradation.glutamate family' '' ''
'13.2.2.1' 'amino acid metabolism.degradation.glutamate family.glutamine' 'niben101scf03908_4341-12804' '(at5g13780 : 264.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38445 : 248.0) no description available & (gnl|cdd|30804 : 92.0) no description available & (reliability: 528.0) & (original description: Putative ard1, Description = N-alpha-acetyltransferase 10, PFAM = PF00583)' T
'13.2.2.1' 'amino acid metabolism.degradation.glutamate family.glutamine' 'niben101scf14883_353813-360425' '(at5g13780 : 278.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38445 : 246.0) no description available & (gnl|cdd|30804 : 89.3) no description available & (reliability: 556.0) & (original description: Putative ard1, Description = N-alpha-acetyltransferase 10, PFAM = PF00583)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'nbv0.3scaffold42276_14058-18002' '(at5g38710 : 526.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 410.0) no description available & (gnl|cdd|85571 : 217.0) no description available & (reliability: 1052.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben044scf00004818ctg004_9368-14219' '(at5g38710 : 514.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 407.0) no description available & (gnl|cdd|85571 : 217.0) no description available & (reliability: 1028.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf00593_477373-488569' '(at5g62530 : 934.0) Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84580 : 135.0) no description available & (gnl|cdd|37661 : 91.1) no description available & (reliability: 1868.0) & (original description: Putative ald1, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf02738_138112-144573' '(at5g38710 : 518.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 412.0) no description available & (gnl|cdd|85571 : 218.0) no description available & (reliability: 1036.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf02738_174078-178225' '(at5g38710 : 518.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 406.0) no description available & (gnl|cdd|85571 : 210.0) no description available & (reliability: 1036.0) & (original description: Putative POX2, Description = Proline dehydrogenase 2, mitochondrial, PFAM = PF01619)' T
'13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf05166_561931-572580' '(at5g62530 : 935.0) Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84580 : 137.0) no description available & (gnl|cdd|37661 : 91.1) no description available & (reliability: 1870.0) & (original description: Putative ald1, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.3scaffold10983_22099-28642' '(at4g08900 : 585.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 505.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 420.0) no description available & (gnl|cdd|84810 : 252.0) no description available & (reliability: 1170.0) & (original description: Putative gbh, Description = Agmatinase, PFAM = PF00491)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.3scaffold30295_1-7750' '(at2g34470 : 466.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 204.0) no description available & (reliability: 932.0) & (original description: Putative ureG, Description = Urease accessory protein G, PFAM = PF02492)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold89_445512-449843' '(at2g35035 : 215.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 93.8) no description available & (reliability: 430.0) & (original description: Putative ureD, Description = Urease accessory protein D, PFAM = PF01774)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold108_1233673-1248276' '(at5g46180 : 498.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36616 : 398.0) no description available & (gnl|cdd|34597 : 325.0) no description available & (q6yze2|gsa_orysa : 95.5) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative OAT1, Description = OAT1, PFAM = PF00202;PF00202)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold607_143973-154178' '(gnl|cdd|36616 : 235.0) no description available & (at5g46180 : 234.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|74563 : 171.0) no description available & (reliability: 468.0) & (original description: Putative car2, Description = Ornithine aminotransferase, PFAM = PF00202)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold716_97374-169141' '(at4g08900 : 231.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 200.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 161.0) no description available & (reliability: 462.0) & (original description: Putative AG1, Description = Arginase, PFAM = PF00491)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold716_162596-165671' '(at4g08900 : 364.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 316.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 265.0) no description available & (gnl|cdd|84810 : 197.0) no description available & (reliability: 728.0) & (original description: Putative gbh, Description = Agmatinase, PFAM = PF00491)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben044scf00030458ctg004_1-9479' '(at2g35035 : 299.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 90.7) no description available & (reliability: 598.0) & (original description: Putative URED, Description = Urease accessory protein D, PFAM = PF01774)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben044scf00050380ctg002_1-2939' '(at2g34470 : 323.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 174.0) no description available & (reliability: 646.0) & (original description: Putative ureG, Description = Urease accessory protein UreG, PFAM = PF02492)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf01125_297072-305748' '(o04016|p5cr_actch : 412.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Actinidia chinensis (Kiwi) (Yangtao) & (at5g14800 : 367.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|38334 : 289.0) no description available & (gnl|cdd|84017 : 270.0) no description available & (reliability: 734.0) & (original description: Putative p5cr, Description = Pyrroline-5-carboxylate reductase, PFAM = PF14748;PF03807)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf03932_430677-448178' '(at5g46180 : 725.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36616 : 631.0) no description available & (gnl|cdd|74563 : 488.0) no description available & (q6yze2|gsa_orysa : 131.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative oat, Description = Ornithine aminotransferase, PFAM = PF00202)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf04506_349171-373700' '(at1g67550 : 1239.0) Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.; urease (URE); CONTAINS InterPro DOMAIN/s: Urease, alpha subunit (InterPro:IPR005848), Urease, alpha subunit, conserved site (InterPro:IPR017950), Amidohydrolase 1 (InterPro:IPR006680), Urease, alpha/gamma subunit (InterPro:IPR002026), Urease, alpha subunit, core (InterPro:IPR017952), Metal-dependent hydrolase, composite domain (InterPro:IPR011059), Urease, beta subunit (InterPro:IPR002019), Urease (InterPro:IPR008221), Urease, alpha subunit, C-terminal (InterPro:IPR017951), Urease alpha-subunit, N-terminal (InterPro:IPR011612); Has 10097 Blast hits to 10094 proteins in 1139 species: Archae - 93; Bacteria - 7117; Metazoa - 16; Fungi - 228; Plants - 47; Viruses - 0; Other Eukaryotes - 2596 (source: NCBI BLink). & (gnl|cdd|30031 : 993.0) no description available & (p08298|urea_soybn : 221.0) Urease (EC 3.5.1.5) (Urea amidohydrolase) (Fragment) - Glycine max (Soybean) & (reliability: 2478.0) & (original description: Putative ure, Description = Urease, PFAM = PF00449;PF00547;PF00699;PF01979)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf04703_936682-943642' '(at4g08900 : 594.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 511.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 427.0) no description available & (gnl|cdd|84810 : 259.0) no description available & (reliability: 1188.0) & (original description: Putative ARGAH1, Description = Arginase 1, mitochondrial, PFAM = PF00491)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf05342_122837-137807' '(at1g67550 : 1311.0) Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.; urease (URE); CONTAINS InterPro DOMAIN/s: Urease, alpha subunit (InterPro:IPR005848), Urease, alpha subunit, conserved site (InterPro:IPR017950), Amidohydrolase 1 (InterPro:IPR006680), Urease, alpha/gamma subunit (InterPro:IPR002026), Urease, alpha subunit, core (InterPro:IPR017952), Metal-dependent hydrolase, composite domain (InterPro:IPR011059), Urease, beta subunit (InterPro:IPR002019), Urease (InterPro:IPR008221), Urease, alpha subunit, C-terminal (InterPro:IPR017951), Urease alpha-subunit, N-terminal (InterPro:IPR011612); Has 10097 Blast hits to 10094 proteins in 1139 species: Archae - 93; Bacteria - 7117; Metazoa - 16; Fungi - 228; Plants - 47; Viruses - 0; Other Eukaryotes - 2596 (source: NCBI BLink). & (gnl|cdd|30031 : 990.0) no description available & (p08298|urea_soybn : 221.0) Urease (EC 3.5.1.5) (Urea amidohydrolase) (Fragment) - Glycine max (Soybean) & (reliability: 2622.0) & (original description: Putative ure, Description = Urease, PFAM = PF01979;PF00547;PF00699;PF00449)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf08792_52590-100930' '(at2g34470 : 477.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 209.0) no description available & (reliability: 954.0) & (original description: Putative ureG, Description = Urease accessory protein UreG, PFAM = PF03188;PF02492)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf08792_74938-83047' '(at2g34470 : 466.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 203.0) no description available & (reliability: 932.0) & (original description: Putative ureG, Description = Urease accessory protein G, PFAM = PF02492)' T
'13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf12102_32281-46580' '(at2g35035 : 397.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 149.0) no description available & (reliability: 794.0) & (original description: Putative ureD, Description = Putative urease accessory protein D, PFAM = PF01774)' T
'13.2.2.3.1' 'amino acid metabolism.degradation.glutamate family.arginine.arginase' '' ''
'13.2.2.3.2' 'amino acid metabolism.degradation.glutamate family.arginine.agmatinase' '' ''
'13.2.2.3.3' 'amino acid metabolism.degradation.glutamate family.arginine.urease' '' ''
'13.2.2.3.1001' 'amino acid metabolism.degradation.glutamate family.arginine' 'urea' 'amino acid synthesis.arginine; amino acid degradation.arginine' M
'13.2.3' 'amino acid metabolism.degradation.aspartate family' '' ''
'13.2.3.1' 'amino acid metabolism.degradation.aspartate family.asparagine' '' ''
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'nbv0.5scaffold924_319470-326840' '(at5g61540 : 380.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (gnl|cdd|36806 : 361.0) no description available & (gnl|cdd|72875 : 282.0) no description available & (reliability: 760.0) & (original description: Putative aga, Description = LOC496249 protein, PFAM = PF01112)' T
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'nbv0.5scaffold8464_1-8355' '(at4g00590 : 319.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1). & (gnl|cdd|36805 : 198.0) no description available & (gnl|cdd|72876 : 143.0) no description available & (reliability: 638.0) & (original description: Putative At4g00590, Description = Putative threonine aspartase, PFAM = PF01112)' T
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf01143_233381-237898' '(q9zsd6|aspg_luplu : 440.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (at5g08100 : 439.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85245 : 390.0) no description available & (gnl|cdd|36805 : 333.0) no description available & (reliability: 878.0) & (original description: Putative ansA, Description = Isoaspartyl peptidase, PFAM = PF01112)' T
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf03809_260123-269997' '(at5g61540 : 443.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (gnl|cdd|36806 : 406.0) no description available & (gnl|cdd|72875 : 334.0) no description available & (reliability: 886.0) & (original description: Putative aga, Description = N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase, PFAM = PF01112)' T
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf04410_395476-401609' '(q9zsd6|aspg_luplu : 437.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (at5g08100 : 424.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85245 : 383.0) no description available & (gnl|cdd|36805 : 324.0) no description available & (reliability: 848.0) & (original description: Putative ansA, Description = Isoaspartyl peptidase, PFAM = PF01112)' T
'13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf05643_551718-555311' '(at3g16150 : 540.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT5G08100.1); Has 3285 Blast hits to 3219 proteins in 891 species: Archae - 113; Bacteria - 1512; Metazoa - 512; Fungi - 247; Plants - 200; Viruses - 0; Other Eukaryotes - 701 (source: NCBI BLink). & (q9zsd6|aspg_luplu : 355.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (gnl|cdd|36805 : 336.0) no description available & (gnl|cdd|85245 : 304.0) no description available & (reliability: 1080.0) & (original description: Putative aspG, Description = Isoaspartyl peptidase, PFAM = PF01112)' T
'13.2.3.2' 'amino acid metabolism.degradation.aspartate family.threonine' 'niben101scf01693_156962-164179' '(o49818|lgul_cicar : 321.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 298.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 229.0) no description available & (gnl|cdd|77707 : 102.0) no description available & (reliability: 596.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'13.2.3.2' 'amino acid metabolism.degradation.aspartate family.threonine' 'niben101scf04560_765453-771333' '(o49818|lgul_cicar : 303.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 284.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 227.0) no description available & (gnl|cdd|77707 : 103.0) no description available & (reliability: 568.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'13.2.3.2.1001' 'amino acid metabolism.degradation.aspartate family.threonine' 'methylglyoxal' 'amino acid metabolism.threonine; amino acid degradation.threonine' M
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'nbv0.3scaffold26798_18616-26710' '(at1g66520 : 361.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|80440 : 226.0) no description available & (gnl|cdd|38292 : 221.0) no description available & (reliability: 722.0) & (original description: Putative fmt, Description = Protein pigment defective 194, PFAM = PF00551)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'nbv0.5scaffold2231_237452-245310' '(at1g66520 : 487.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|38292 : 288.0) no description available & (gnl|cdd|80440 : 262.0) no description available & (reliability: 974.0) & (original description: Putative ppd194, Description = Protein pigment defective 194, PFAM = PF00551;PF02911)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf01171_312308-316508' '(p68173|sahh_tobac : 955.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 917.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 738.0) no description available & (gnl|cdd|36584 : 690.0) no description available & (reliability: 1834.0) & (original description: Putative SAHH1, Description = Adenosylhomocysteinase 1, PFAM = PF00670;PF05221)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf01640_388915-397208' '(at1g66520 : 362.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|80440 : 226.0) no description available & (gnl|cdd|38292 : 224.0) no description available & (reliability: 724.0) & (original description: Putative fmt, Description = Methionyl-tRNA formyltransferase, PFAM = PF00551)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf02853_496654-505287' '(q01781|sahh_petcr : 311.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at4g13940 : 300.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 282.0) no description available & (gnl|cdd|36584 : 265.0) no description available & (reliability: 600.0) & (original description: Putative abcY, Description = Adenosylhomocysteinase, PFAM = PF00670;PF05221)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf09136_1814-6910' '(p68173|sahh_tobac : 899.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 845.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 727.0) no description available & (gnl|cdd|36584 : 678.0) no description available & (reliability: 1690.0) & (original description: Putative SAHH, Description = Adenosylhomocysteinase, PFAM = PF00670;PF05221)' T
'13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf10608_187215-192416' '(p68173|sahh_tobac : 934.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 880.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 739.0) no description available & (gnl|cdd|36584 : 689.0) no description available & (reliability: 1760.0) & (original description: Putative SAHH, Description = Adenosylhomocysteinase, PFAM = PF05221;PF00670)' T
'13.2.3.4.1' 'amino acid metabolism.degradation.aspartate family.methionine.methionine gamma-lyase' 'niben044scf00033216ctg008_2702-5613' '(at1g64660 : 400.0) Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.; methionine gamma-lyase (MGL); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 19547 Blast hits to 19544 proteins in 2474 species: Archae - 216; Bacteria - 11847; Metazoa - 211; Fungi - 771; Plants - 270; Viruses - 0; Other Eukaryotes - 6232 (source: NCBI BLink). & (gnl|cdd|35276 : 215.0) no description available & (gnl|cdd|30971 : 205.0) no description available & (reliability: 800.0) & (original description: Putative cysA, Description = Methionine gamma-lyase, PFAM = PF01053)' T
'13.2.3.4.1' 'amino acid metabolism.degradation.aspartate family.methionine.methionine gamma-lyase' 'niben101scf03894_295585-303493' '(at1g64660 : 625.0) Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.; methionine gamma-lyase (MGL); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 19547 Blast hits to 19544 proteins in 2474 species: Archae - 216; Bacteria - 11847; Metazoa - 211; Fungi - 771; Plants - 270; Viruses - 0; Other Eukaryotes - 6232 (source: NCBI BLink). & (gnl|cdd|35276 : 336.0) no description available & (gnl|cdd|30971 : 300.0) no description available & (reliability: 1250.0) & (original description: Putative MGL, Description = Methionine gamma-lyase, PFAM = PF01053)' T
'13.2.3.5' 'amino acid metabolism.degradation.aspartate family.lysine' 'niben101scf07304_234436-253784' '(at4g33150 : 1387.0) lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097); Has 1125 Blast hits to 1121 proteins in 331 species: Archae - 40; Bacteria - 296; Metazoa - 110; Fungi - 190; Plants - 55; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|35393 : 416.0) no description available & (gnl|cdd|86318 : 224.0) no description available & (reliability: 2774.0) & (original description: Putative aass, Description = Alpha-aminoadipic semialdehyde synthase, PFAM = PF03435;PF16653;PF04455;PF05222)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold39231_10847-18596' '(at5g11950 : 299.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 186.0) no description available & (reliability: 550.0) & (original description: Putative LOG8, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold44264_9290-14704' '(at2g28305 : 316.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 190.0) no description available & (reliability: 600.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold65161_2353-8422' '(at3g53450 : 347.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 188.0) no description available & (reliability: 642.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.5scaffold167_710367-719362' '(at2g37210 : 295.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 159.0) no description available & (reliability: 558.0) & (original description: Putative LOG4, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.5scaffold1374_203069-220571' '(at2g28305 : 241.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 146.0) no description available & (reliability: 452.0) & (original description: Putative LOG, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00005836ctg004_151-5436' '(at5g06300 : 213.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 146.0) no description available & (reliability: 426.0) & (original description: Putative log1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00007273ctg004_3807-7111' '(at3g53450 : 226.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 153.0) no description available & (reliability: 412.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00049482ctg002_983-6361' '(at2g28305 : 244.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 158.0) no description available & (reliability: 470.0) & (original description: Putative LOG, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00152_2515946-2522425' '(at2g28305 : 313.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 191.0) no description available & (reliability: 592.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00508_264017-281757' '(at2g28305 : 338.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 176.0) no description available & (reliability: 636.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00508_264038-281817' '(at2g28305 : 338.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 178.0) no description available & (reliability: 642.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf01394_281595-290002' '(at5g11950 : 294.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 183.0) no description available & (reliability: 546.0) & (original description: Putative LDB2, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf03292_466653-469746' '(at3g53450 : 225.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 151.0) no description available & (reliability: 408.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf04551_75863-82230' '(at1g50575 : 357.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: carboxy-lyase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); Has 3310 Blast hits to 3310 proteins in 987 species: Archae - 6; Bacteria - 2367; Metazoa - 4; Fungi - 47; Plants - 208; Viruses - 0; Other Eukaryotes - 678 (source: NCBI BLink). & (gnl|cdd|86394 : 100.0) no description available & (reliability: 714.0) & (original description: Putative RCOM_0046330, Description = Carboxy-lyase, putative, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf04717_331091-338517' '(at5g06300 : 359.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 189.0) no description available & (reliability: 718.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf09962_13294-28079' '(at2g37210 : 310.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 164.0) no description available & (reliability: 588.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T
'13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf12674_157015-162811' '(at5g06300 : 320.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 186.0) no description available & (reliability: 640.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T
'13.2.3.5.1001' 'amino acid metabolism.degradation.aspartate family.lysine' 'glutarate' 'amino acid degradation.lysine, lipids' M
'13.2.3.5.1002' 'amino acid metabolism.degradation.aspartate family.lysine' '2-aminoadipic acid' 'amino acid degradation.lysine' M
'13.2.4' 'amino acid metabolism.degradation.branched chain group' '' ''
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold16947_5520-33877' '(gnl|cdd|36396 : 603.0) no description available & (at1g21400 : 557.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 365.0) no description available & (p52903|odpa_soltu : 122.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1114.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold53953_1-7599' '(gnl|cdd|36396 : 513.0) no description available & (at1g21400 : 499.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 298.0) no description available & (p52902|odpa_pea : 99.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 998.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold61045_438-11344' '(at3g08860 : 756.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 620.0) no description available & (gnl|cdd|30509 : 435.0) no description available & (q6yze2|gsa_orysa : 85.1) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1512.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold1509_269302-277005' '(gnl|cdd|36396 : 533.0) no description available & (at1g21400 : 516.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 317.0) no description available & (p52902|odpa_pea : 105.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 1032.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold1736_181467-188866' '(at5g09300 : 625.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36396 : 611.0) no description available & (gnl|cdd|48163 : 377.0) no description available & (p52903|odpa_soltu : 148.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1250.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold3699_53635-61149' '(at2g33150 : 677.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 646.0) no description available & (gnl|cdd|29411 : 458.0) no description available & (reliability: 1354.0) & (original description: Putative KAT5, Description = 3-ketoacyl-CoA thiolase 5, peroxisomal, PFAM = PF00108;PF02803)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf00155_51296-59629' '(gnl|cdd|35745 : 620.0) no description available & (at1g55510 : 595.0) branched-chain alpha-keto acid decarboxylase E1 beta; branched-chain alpha-keto acid decarboxylase E1 beta subunit (BCDH BETA1); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT3G13450.1); Has 16577 Blast hits to 16568 proteins in 2706 species: Archae - 211; Bacteria - 10745; Metazoa - 523; Fungi - 224; Plants - 389; Viruses - 0; Other Eukaryotes - 4485 (source: NCBI BLink). & (gnl|cdd|30372 : 436.0) no description available & (p52904|odpb_pea : 183.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1190.0) & (original description: Putative DIN4, Description = 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial, PFAM = PF02779;PF02780)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf01641_97064-102189' '(gnl|cdd|36396 : 603.0) no description available & (at1g21400 : 592.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 376.0) no description available & (p52903|odpa_soltu : 135.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1184.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf01657_168345-183488' '(at5g09300 : 624.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36396 : 613.0) no description available & (gnl|cdd|48163 : 378.0) no description available & (p52903|odpa_soltu : 148.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1248.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf02011_955808-965886' '(gnl|cdd|36396 : 488.0) no description available & (at1g21400 : 464.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 313.0) no description available & (p52902|odpa_pea : 106.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 928.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676;PF00676;PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf04523_54068-63860' '(at3g06850 : 543.0) dihydrolipoamide branched chain acyltransferase; BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink). & (gnl|cdd|35778 : 497.0) no description available & (gnl|cdd|84001 : 352.0) no description available & (reliability: 1086.0) & (original description: Putative bkdC, Description = Dihydrolipoyl transacylase, PFAM = PF00198;PF02817;PF00364)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf06556_691241-699083' '(at3g06850 : 541.0) dihydrolipoamide branched chain acyltransferase; BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink). & (gnl|cdd|35778 : 493.0) no description available & (gnl|cdd|84001 : 351.0) no description available & (reliability: 1082.0) & (original description: Putative BCE2, Description = Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, PFAM = PF00364;PF02817;PF00198)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf09310_321861-334159' '(gnl|cdd|35745 : 618.0) no description available & (at1g55510 : 595.0) branched-chain alpha-keto acid decarboxylase E1 beta; branched-chain alpha-keto acid decarboxylase E1 beta subunit (BCDH BETA1); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT3G13450.1); Has 16577 Blast hits to 16568 proteins in 2706 species: Archae - 211; Bacteria - 10745; Metazoa - 523; Fungi - 224; Plants - 389; Viruses - 0; Other Eukaryotes - 4485 (source: NCBI BLink). & (gnl|cdd|30372 : 439.0) no description available & (p52904|odpb_pea : 183.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1190.0) & (original description: Putative DIN4, Description = 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial, PFAM = PF02779;PF02780)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf09544_16266-28355' '(gnl|cdd|36396 : 598.0) no description available & (at1g21400 : 596.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 367.0) no description available & (p52903|odpa_soltu : 133.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1192.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf10189_275160-281650' '(at2g33150 : 742.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 672.0) no description available & (gnl|cdd|29411 : 474.0) no description available & (reliability: 1484.0) & (original description: Putative PED1, Description = 3-ketoacyl-CoA thiolase 2, peroxisomal, PFAM = PF02803;PF00108)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf12528_15590-23004' '(at3g08860 : 752.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|30509 : 432.0) no description available & (q39566|gsa_chlre : 84.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 1504.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T
'13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf14910_38289-61557' '(gnl|cdd|36396 : 601.0) no description available & (at1g21400 : 557.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 364.0) no description available & (p52903|odpa_soltu : 122.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1114.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T
'13.2.4.1.7' 'amino acid metabolism.degradation.branched chain group.shared.methylglutaconyl-CoA hydratase' '' ''
'13.2.4.2' 'amino acid metabolism.degradation.branched chain group.val ile' '' ''
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 938.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.3scaffold41571_5179-13028' '(at2g14170 : 874.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 466.0) no description available & (gnl|cdd|37661 : 294.0) no description available & (p17202|badh_spiol : 198.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1748.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 908.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 798.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold2265_55010-63257' '(at2g14170 : 812.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 433.0) no description available & (gnl|cdd|37661 : 273.0) no description available & (p17202|badh_spiol : 182.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1624.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold3845_176346-192566' '(at4g31810 : 571.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 445.0) no description available & (gnl|cdd|75599 : 262.0) no description available & (reliability: 1142.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben044scf00053207ctg002_668-9359' '(at4g31810 : 374.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 278.0) no description available & (gnl|cdd|76257 : 158.0) no description available & (reliability: 748.0) & (original description: Putative BnaCnng76550D, Description = BnaCnng76550D protein, PFAM = PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf00062_165858-175026' '(at2g14170 : 864.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 467.0) no description available & (gnl|cdd|37661 : 295.0) no description available & (p17202|badh_spiol : 198.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1728.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 914.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf05011_153544-170214' '(at4g31810 : 537.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 409.0) no description available & (gnl|cdd|75599 : 232.0) no description available & (reliability: 1074.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T
'13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf07414_235974-244952' '(at4g20930 : 449.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, valine catabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase (InterPro:IPR011548), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35630 : 326.0) no description available & (gnl|cdd|32267 : 260.0) no description available & (reliability: 898.0) & (original description: Putative hibA, Description = 3-hydroxyisobutyrate dehydrogenase, PFAM = PF14833;PF03446)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'nbv0.5scaffold1017_459807-472622' '(at2g26800 : 504.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 485.0) no description available & (gnl|cdd|81700 : 445.0) no description available & (reliability: 1008.0) & (original description: Putative Hmgcl, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben044scf00018934ctg016_80-5958' '(at4g34030 : 744.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35760 : 618.0) no description available & (gnl|cdd|34408 : 532.0) no description available & (reliability: 1488.0) & (original description: Putative MCCB, Description = Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, PFAM = PF01039)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben044scf00026050ctg006_537-2495' '(at2g26800 : 108.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 105.0) no description available & (gnl|cdd|81700 : 100.0) no description available & (reliability: 216.0) & (original description: Putative hmgL, Description = Hydroxymethylglutaryl-CoA lyase, PFAM = )' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf02631_155897-165336' '(at4g34030 : 867.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35760 : 700.0) no description available & (gnl|cdd|34408 : 600.0) no description available & (reliability: 1734.0) & (original description: Putative MCCB, Description = Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, PFAM = PF01039)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf02829_616159-640412' '(q42777|mcca_soybn : 1052.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Glycine max (Soybean) & (at1g03090 : 1040.0) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.; MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 41492 Blast hits to 34824 proteins in 3674 species: Archae - 718; Bacteria - 26555; Metazoa - 1797; Fungi - 1117; Plants - 802; Viruses - 0; Other Eukaryotes - 10503 (source: NCBI BLink). & (gnl|cdd|35459 : 844.0) no description available & (gnl|cdd|34383 : 774.0) no description available & (reliability: 2080.0) & (original description: Putative MCCA, Description = Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial, PFAM = PF02786;PF02785;PF00364;PF00289)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf05201_235413-242292' '(at2g26800 : 551.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 469.0) no description available & (gnl|cdd|81700 : 431.0) no description available & (reliability: 1102.0) & (original description: Putative HMGCL, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf07350_51125-58964' '(q9fs88|ivd1_soltu : 791.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (at3g45300 : 674.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (gnl|cdd|29656 : 641.0) no description available & (gnl|cdd|35363 : 620.0) no description available & (reliability: 1348.0) & (original description: Putative 2MBCD, Description = 2-methylacyl-CoA dehydrogenase, mitochondrial, PFAM = PF02771;PF00441;PF02770)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf12320_25777-32023' '(at2g26800 : 550.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 467.0) no description available & (gnl|cdd|81700 : 428.0) no description available & (reliability: 1100.0) & (original description: Putative HMGCL, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T
'13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf15836_51841-67152' '(q9fs87|ivd2_soltu : 750.0) Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor (EC 1.3.99.10) (IVD 2) (Fragment) - Solanum tuberosum (Potato) & (at3g45300 : 672.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (gnl|cdd|29656 : 653.0) no description available & (gnl|cdd|35363 : 634.0) no description available & (reliability: 1344.0) & (original description: Putative IVD, Description = Isovaleryl-CoA dehydrogenase, mitochondrial, PFAM = PF02771;PF00441;PF02770)' T
'13.2.4.4.6' 'amino acid metabolism.degradation.branched chain group.leucine.methylcrotonoyl-CoA carboxylase' '' ''
'13.2.4.4.8' 'amino acid metabolism.degradation.branched chain group.leucine.hydroxymethylglutaryl-CoA lyase' '' ''
'13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'nbv0.5scaffold3699_53635-61149' '(at2g33150 : 677.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 646.0) no description available & (gnl|cdd|29411 : 458.0) no description available & (reliability: 1240.0) & (original description: Putative KAT5, Description = 3-ketoacyl-CoA thiolase 5, peroxisomal, PFAM = PF00108;PF02803)' T
'13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1090.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T
'13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1110.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T
'13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T
'13.2.4.99' 'amino acid metabolism.degradation.branched chain group.unspecified' '' ''
'13.2.5' 'amino acid metabolism.degradation.serine-glycine-cysteine group' '' ''
'13.2.5.1' 'amino acid metabolism.degradation.serine-glycine-cysteine group.serine' '' ''
'13.2.5.1.1001' 'amino acid metabolism.degradation.serine-glycine-cysteine group.serine' 'glycerate' 'PS.photorepiration; lipid metabolism; amino acid degradation.serine; amino acid degradation.glycine; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'nbv0.5scaffold5315_44745-57523' '(at1g72190 : 303.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 134.0) no description available & (gnl|cdd|84741 : 122.0) no description available & (reliability: 606.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF02826;PF00389)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben044scf00007921ctg008_2562-8575' '(at1g72190 : 267.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 140.0) no description available & (gnl|cdd|84741 : 136.0) no description available & (reliability: 534.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF00389;PF02826)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben044scf00013023ctg008_22232-26386' '(p54260|gcst_soltu : 819.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 740.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 530.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1480.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF08669;PF01571)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf01718_101438-107286' '(at1g68010 : 669.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 660.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 288.0) no description available & (gnl|cdd|84741 : 249.0) no description available & (reliability: 1338.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826;PF02826)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf02145_1055454-1060904' '(p54260|gcst_soltu : 825.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 743.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 531.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1486.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF01571;PF08669)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf03121_405670-431276' '(at1g72190 : 445.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 239.0) no description available & (gnl|cdd|84741 : 214.0) no description available & (q9sxp2|fdh1_orysa : 95.9) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative 20, Description = Erythronate-4-phosphate+dehydrogenase+domain+containing+protein, PFAM = PF02826;PF00389)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf03435_121212-127389' '(at1g08630 : 519.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.; threonine aldolase 1 (THA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: threonine aldolase 2 (TAIR:AT3G04520.2); Has 3797 Blast hits to 3793 proteins in 1149 species: Archae - 25; Bacteria - 2286; Metazoa - 91; Fungi - 253; Plants - 87; Viruses - 0; Other Eukaryotes - 1055 (source: NCBI BLink). & (gnl|cdd|36582 : 486.0) no description available & (gnl|cdd|85309 : 331.0) no description available & (reliability: 1038.0) & (original description: Putative THA1, Description = Probable low-specificity L-threonine aldolase 1, PFAM = PF01212)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf06809_165015-177590' '(at1g68010 : 683.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 675.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 291.0) no description available & (gnl|cdd|84741 : 254.0) no description available & (reliability: 1366.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826)' T
'13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf09658_75866-82652' '(at1g08630 : 520.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.; threonine aldolase 1 (THA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: threonine aldolase 2 (TAIR:AT3G04520.2); Has 3797 Blast hits to 3793 proteins in 1149 species: Archae - 25; Bacteria - 2286; Metazoa - 91; Fungi - 253; Plants - 87; Viruses - 0; Other Eukaryotes - 1055 (source: NCBI BLink). & (gnl|cdd|36582 : 484.0) no description available & (gnl|cdd|85309 : 333.0) no description available & (reliability: 1040.0) & (original description: Putative THA1, Description = Probable low-specificity L-threonine aldolase 1, PFAM = PF01212)' T
'13.2.5.2.11' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine.threonine aldolase' '' ''
'13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold105_1192868-1198537' '(at1g79230 : 350.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 188.0) no description available & (gnl|cdd|29079 : 164.0) no description available & (reliability: 700.0) & (original description: Putative mst, Description = Sulfurtransferase, PFAM = PF00581)' T
'13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold2213_303762-320769' '(at1g79230 : 541.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 326.0) no description available & (gnl|cdd|32722 : 288.0) no description available & (reliability: 1082.0) & (original description: Putative sseA, Description = Sulfurtransferase, PFAM = PF00581;PF00581)' T
'13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold6853_83221-88899' '(at1g79230 : 213.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|29080 : 156.0) no description available & (gnl|cdd|36742 : 148.0) no description available & (reliability: 426.0) & (original description: Putative mst, Description = Sulfurtransferase, PFAM = PF00581)' T
'13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'niben101scf05295_582319-599333' '(at1g79230 : 545.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 324.0) no description available & (gnl|cdd|32722 : 289.0) no description available & (reliability: 1090.0) & (original description: Putative STR2, Description = Thiosulfate/3-mercaptopyruvate sulfurtransferase 2, PFAM = PF00581;PF00581)' T
'13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'niben101scf05688_798303-809718' '(at1g79230 : 557.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 331.0) no description available & (gnl|cdd|32722 : 298.0) no description available & (reliability: 1114.0) & (original description: Putative STR1, Description = Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial, PFAM = PF00581;PF00581)' T
'13.2.5.4' 'amino acid metabolism.degradation.serine-glycine-cysteine group.misc' '' ''
'13.2.6' 'amino acid metabolism.degradation.aromatic aa' '' ''
'13.2.6.1' 'amino acid metabolism.degradation.aromatic aa.phenylalanine' '' ''
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold15486_34054-39319' '(gnl|cdd|36748 : 304.0) no description available & (at4g15940 : 301.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|30528 : 233.0) no description available & (reliability: 602.0) & (original description: Putative TK1872, Description = 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, FAA hydrolase family, PFAM = PF01557)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 962.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold50589_5769-13690' '(at1g12050 : 704.0) fumarylacetoacetase, putative; FUNCTIONS IN: fumarylacetoacetase activity, catalytic activity; INVOLVED IN: aromatic amino acid family metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234), Fumarylacetoacetase, N-terminal (InterPro:IPR015377), Fumarylacetoacetase (InterPro:IPR005959); Has 4441 Blast hits to 4434 proteins in 1063 species: Archae - 139; Bacteria - 2814; Metazoa - 297; Fungi - 179; Plants - 60; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). & (gnl|cdd|38054 : 548.0) no description available & (gnl|cdd|87867 : 177.0) no description available & (reliability: 1408.0) & (original description: Putative Fah, Description = Fumarylacetoacetase, PFAM = PF09298;PF01557)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 696.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben044scf00013451ctg006_330-2784' '(gnl|cdd|35480 : 149.0) no description available & (at5g36160 : 138.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben044scf00025761ctg006_1-4784' '(at4g15940 : 313.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|36748 : 313.0) no description available & (gnl|cdd|30528 : 238.0) no description available & (reliability: 626.0) & (original description: Putative fahd1, Description = Acylpyruvase FAHD1, mitochondrial, PFAM = PF01557)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf01119_39535-52938' '(at5g54080 : 786.0) homogentisate 1,2-dioxygenase; "homogentisate 1,2-dioxygenase" (HGO); FUNCTIONS IN: homogentisate 1,2-dioxygenase activity; INVOLVED IN: oxidation reduction, tyrosine metabolic process, L-phenylalanine catabolic process, tyrosine catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Homogentisate 1,2-dioxygenase (InterPro:IPR005708); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5vrh4|hgd_orysa : 706.0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) - Oryza sativa (Rice) & (gnl|cdd|36631 : 704.0) no description available & (gnl|cdd|81536 : 628.0) no description available & (reliability: 1572.0) & (original description: Putative HGO, Description = Homogentisate 1,2-dioxygenase, PFAM = PF04209)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 988.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1080.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf06556_705118-719133' '(at4g15940 : 309.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|36748 : 304.0) no description available & (gnl|cdd|30528 : 232.0) no description available & (reliability: 618.0) & (original description: Putative fahd1, Description = Acylpyruvase FAHD1, mitochondrial, PFAM = PF01557)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf07714_24247-32014' '(gnl|cdd|35480 : 584.0) no description available & (at5g53970 : 577.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 240.0) no description available & (reliability: 1154.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf08309_108762-114435' '(at5g54080 : 778.0) homogentisate 1,2-dioxygenase; "homogentisate 1,2-dioxygenase" (HGO); FUNCTIONS IN: homogentisate 1,2-dioxygenase activity; INVOLVED IN: oxidation reduction, tyrosine metabolic process, L-phenylalanine catabolic process, tyrosine catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Homogentisate 1,2-dioxygenase (InterPro:IPR005708); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5vrh4|hgd_orysa : 706.0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) - Oryza sativa (Rice) & (gnl|cdd|36631 : 701.0) no description available & (gnl|cdd|81536 : 626.0) no description available & (reliability: 1556.0) & (original description: Putative HGO, Description = Homogentisate 1,2-dioxygenase, PFAM = PF04209)' T
'13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf17787_15300-29278' '(at1g12050 : 702.0) fumarylacetoacetase, putative; FUNCTIONS IN: fumarylacetoacetase activity, catalytic activity; INVOLVED IN: aromatic amino acid family metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234), Fumarylacetoacetase, N-terminal (InterPro:IPR015377), Fumarylacetoacetase (InterPro:IPR005959); Has 4441 Blast hits to 4434 proteins in 1063 species: Archae - 139; Bacteria - 2814; Metazoa - 297; Fungi - 179; Plants - 60; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). & (gnl|cdd|38054 : 546.0) no description available & (gnl|cdd|87867 : 175.0) no description available & (reliability: 1404.0) & (original description: Putative fah, Description = Fumarylacetoacetase, PFAM = PF01557;PF09298)' T
'13.2.6.2.6' 'amino acid metabolism.degradation.aromatic aa.tyrosine.fumarylacetoacetase' '' ''
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.3scaffold14335_17652-23956' '(at4g16800 : 320.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 320.0) no description available & (gnl|cdd|82307 : 271.0) no description available & (reliability: 640.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 992.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 976.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold1324_1-12352' '(at4g13360 : 299.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 211.0) no description available & (gnl|cdd|75599 : 118.0) no description available & (reliability: 598.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 834.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold2772_200310-220742' '(at4g13360 : 553.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 422.0) no description available & (gnl|cdd|75306 : 245.0) no description available & (reliability: 1106.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben044scf00030495ctg011_2184-10895' '(at3g24360 : 539.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 408.0) no description available & (gnl|cdd|75306 : 239.0) no description available & (reliability: 1078.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 968.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf00917_462841-477723' '(at4g13360 : 583.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 432.0) no description available & (gnl|cdd|75306 : 241.0) no description available & (reliability: 1166.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02451_660668-669283' '(at3g24360 : 476.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 355.0) no description available & (gnl|cdd|75306 : 208.0) no description available & (reliability: 952.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113;PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02568_80434-89389' '(at1g06550 : 534.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: response to karrikin, fatty acid beta-oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 26566 Blast hits to 26556 proteins in 2155 species: Archae - 406; Bacteria - 18031; Metazoa - 1157; Fungi - 686; Plants - 463; Viruses - 0; Other Eukaryotes - 5823 (source: NCBI BLink). & (gnl|cdd|36897 : 341.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 1068.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-coenzyme A hydrolase, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02909_476612-487993' '(at5g65940 : 563.0) hydrolyzes beta-hydroxyisobutyryl-CoA; beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31609 Blast hits to 31599 proteins in 2217 species: Archae - 411; Bacteria - 21537; Metazoa - 1271; Fungi - 809; Plants - 626; Viruses - 0; Other Eukaryotes - 6955 (source: NCBI BLink). & (gnl|cdd|36897 : 405.0) no description available & (gnl|cdd|75599 : 299.0) no description available & (reliability: 1126.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase 1, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03018_1877737-1936486' '(at2g30660 : 392.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36897 : 350.0) no description available & (gnl|cdd|75599 : 277.0) no description available & (reliability: 784.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase 1, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03018_1886358-1923239' '(at2g30660 : 228.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36897 : 200.0) no description available & (gnl|cdd|75599 : 165.0) no description available & (reliability: 456.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03720_108168-113093' '(at4g16210 : 380.0) enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink). & (gnl|cdd|36893 : 241.0) no description available & (gnl|cdd|81879 : 236.0) no description available & (q39659|mfpa_cucsa : 101.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 760.0) & (original description: Putative ECHIA, Description = Probable enoyl-CoA hydratase 1, peroxisomal, PFAM = PF00378)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf04103_1-12416' '(at3g24360 : 550.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 415.0) no description available & (gnl|cdd|75306 : 250.0) no description available & (reliability: 1100.0) & (original description: Putative At3g24360, Description = Putative 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial-like, PFAM = PF16113)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1090.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf05348_10464-13195' '(at1g65520 : 250.0) encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation; "delta(3), delta(2)-enoyl CoA isomerase 1" (ECI1); FUNCTIONS IN: carnitine racemase activity, catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 6860 Blast hits to 6860 proteins in 1261 species: Archae - 142; Bacteria - 4521; Metazoa - 587; Fungi - 178; Plants - 198; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|31227 : 86.3) no description available & (reliability: 500.0) & (original description: Putative ECI1, Description = Enoyl-CoA delta isomerase 1, peroxisomal, PFAM = PF00378)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1110.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf06078_463131-473379' '(at4g16800 : 319.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 318.0) no description available & (gnl|cdd|82307 : 269.0) no description available & (reliability: 638.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T
'13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf11064_11955-14671' '(at4g14430 : 233.0) Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.; indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink). & (gnl|cdd|31227 : 80.1) no description available & (reliability: 466.0) & (original description: Putative ECI3, Description = Enoyl-CoA delta isomerase 3, PFAM = PF00378)' T
'13.2.6.4' 'amino acid metabolism.degradation.aromatic aa.chorismate' '' ''
'13.2.6.5' 'amino acid metabolism.degradation.aromatic aa.misc' '' ''
'13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.3scaffold73369_4580-8544' '(at1g43710 : 331.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 218.0) no description available & (gnl|cdd|35848 : 188.0) no description available & (reliability: 662.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.5scaffold439_256771-262216' '(at1g43710 : 537.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 342.0) no description available & (gnl|cdd|35848 : 274.0) no description available & (reliability: 1074.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.5scaffold20831_1-1423' '(at1g43710 : 213.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 172.0) no description available & (gnl|cdd|35848 : 140.0) no description available & (reliability: 426.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'niben044scf00042602ctg006_441-5783' '(at1g43710 : 538.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 339.0) no description available & (gnl|cdd|35848 : 277.0) no description available & (reliability: 1076.0) & (original description: Putative AADC2, Description = Aromatic amino acid decarboxylase 2, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf01777_72722-79576' '(at1g43710 : 521.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 343.0) no description available & (gnl|cdd|35848 : 272.0) no description available & (reliability: 1042.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf02191_32310-38071' '(at1g43710 : 812.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35848 : 407.0) no description available & (gnl|cdd|81035 : 356.0) no description available & (reliability: 1624.0) & (original description: Putative SDC, Description = Serine decarboxylase, PFAM = PF00282)' T
'13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf05824_422495-427834' '(at1g43710 : 544.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 347.0) no description available & (gnl|cdd|35848 : 286.0) no description available & (reliability: 1088.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T
'13.99' 'amino acid metabolism.misc' 'nbv0.3scaffold73465_1302-7971' '(at1g76990 : 649.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1298.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold3940_4191-10862' '(at1g76990 : 632.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1264.0) & (original description: Putative ACR2, Description = ACT domain-containing protein ACR2, PFAM = PF01842;PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold3984_95143-99449' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 126.0) no description available & (reliability: 1102.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold5892_120820-127538' '(at1g76990 : 637.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 127.0) no description available & (reliability: 1274.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben044scf00022844ctg004_1460-6139' '(at1g76990 : 459.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 129.0) no description available & (reliability: 918.0) & (original description: Putative ACR2, Description = [Protein-PII] uridylyltransferase, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben044scf00022908ctg002_399-5162' '(at3g01990 : 539.0) Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.; ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|80396 : 124.0) no description available & (reliability: 1022.0) & (original description: Putative ACR6, Description = ACT domain-containing protein ACR6, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben044scf00058283ctg000_4512-7332' '(at1g49820 : 207.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 166.0) no description available & (reliability: 414.0) & (original description: Putative mtnK, Description = Methylthioribose kinase, PFAM = )' T
'13.99' 'amino acid metabolism.misc' 'niben101scf00483_454449-467209' '(at1g76990 : 636.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1272.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf00915_137428-141407' '(at1g69040 : 477.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 120.0) no description available & (reliability: 954.0) & (original description: Putative Sb07g026100, Description = Putative uncharacterized protein Sb07g026100, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf01341_119685-122625' '(at1g49820 : 246.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 183.0) no description available & (reliability: 492.0) & (original description: Putative mtnK, Description = Methylthioribose kinase, PFAM = )' T
'13.99' 'amino acid metabolism.misc' 'niben101scf01423_129633-134787' '(at1g69040 : 680.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 131.0) no description available & (reliability: 1360.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf02188_249021-259541' '(at3g01990 : 538.0) Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.; ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|80396 : 123.0) no description available & (reliability: 1046.0) & (original description: Putative ACR6, Description = ACT domain-containing protein ACR6, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf02652_233992-238318' '(at1g12420 : 555.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 128.0) no description available & (reliability: 1110.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf03374_744298-749821' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80394 : 115.0) no description available & (reliability: 1102.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf03385_81515-86980' '(at1g49820 : 652.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 433.0) no description available & (reliability: 1304.0) & (original description: Putative MTK, Description = Methylthioribose kinase, PFAM = PF01636)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf05078_548645-553040' '(at1g69040 : 468.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 123.0) no description available & (reliability: 936.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842;PF01842)' T
'13.99' 'amino acid metabolism.misc' 'niben101scf20316_228738-233843' '(at1g69040 : 596.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 132.0) no description available & (reliability: 1192.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842)' T
'13.99.1' 'amino acid metabolism.misc.central amino acid metabolism' '' ''
'13.99.2' 'amino acid metabolism.misc.glutamate family' '' ''
'13.99.2.4' 'amino acid metabolism.misc.glutamate family.hydroxyproline' '' ''
'13.1001' 'amino acid metabolism.methionine S-oxide' 'methionine s-oxide' 'oxydized product is recycled via reeductase; Methionine sulfoxide' M
'14' 'S-assimilation' '' ''
'14.1' 'S-assimilation.ATPS' 'niben044scf00009853ctg036_1-5454' '(at3g22890 : 745.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 571.0) no description available & (gnl|cdd|28806 : 439.0) no description available & (reliability: 1490.0) & (original description: Putative APS1, Description = ATP sulfurylase 1, chloroplastic, PFAM = PF14306;PF01747)' T
'14.1' 'S-assimilation.ATPS' 'niben101scf03927_393729-400677' '(at3g22890 : 739.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 566.0) no description available & (gnl|cdd|28806 : 438.0) no description available & (reliability: 1478.0) & (original description: Putative APS1, Description = ATP sulfurylase 1, chloroplastic, PFAM = PF01747;PF14306)' T
'14.1' 'S-assimilation.ATPS' 'niben101scf06205_270805-276911' '(at3g22890 : 729.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 572.0) no description available & (gnl|cdd|28806 : 444.0) no description available & (reliability: 1458.0) & (original description: Putative APS3, Description = ATP-sulfurylase 3, chloroplastic, PFAM = PF01747;PF14306)' T
'14.1' 'S-assimilation.ATPS' 'niben101scf16508_70421-77043' '(at1g19920 : 771.0) encodes a chloroplast form of ATP sulfurylase; APS2; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2101 Blast hits to 2098 proteins in 651 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (gnl|cdd|35855 : 578.0) no description available & (gnl|cdd|28806 : 445.0) no description available & (reliability: 1542.0) & (original description: Putative APS2, Description = ATP sulfurylase 2, PFAM = PF01747;PF14306)' T
'14.2' 'S-assimilation.APR' 'nbv0.3scaffold16428_13601-18505' '(at4g04610 : 650.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 359.0) no description available & (gnl|cdd|80937 : 222.0) no description available & (reliability: 1300.0) & (original description: Putative apr, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T
'14.2' 'S-assimilation.APR' 'nbv0.5scaffold1066_175334-181711' '(at4g04610 : 217.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|48542 : 158.0) no description available & (reliability: 434.0) & (original description: Putative apr, Description = 5'-adenylylsulfate reductase, PFAM = PF00085)' T
'14.2' 'S-assimilation.APR' 'niben101scf04446_64563-69466' '(at4g04610 : 674.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 380.0) no description available & (gnl|cdd|80937 : 246.0) no description available & (reliability: 1348.0) & (original description: Putative cysH, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T
'14.2' 'S-assimilation.APR' 'niben101scf05438_318165-322628' '(at4g21990 : 697.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 3 (APR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500); BEST Arabidopsis thaliana protein match is: APS reductase 1 (TAIR:AT4G04610.1). & (gnl|cdd|35410 : 379.0) no description available & (gnl|cdd|80937 : 243.0) no description available & (reliability: 1394.0) & (original description: Putative 37712, Description = 5'-adenylylsulfate reductase 3, chloroplastic, PFAM = PF01507;PF00085)' T
'14.2' 'S-assimilation.APR' 'niben101scf12197_290300-295035' '(at4g04610 : 703.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 385.0) no description available & (gnl|cdd|80937 : 244.0) no description available & (reliability: 1406.0) & (original description: Putative 37712, Description = 5'-adenylylsulfate reductase 3, chloroplastic, PFAM = PF01507;PF00085)' T
'14.2' 'S-assimilation.APR' 'niben101scf37733_1991-5195' '(at4g21990 : 621.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 3 (APR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500); BEST Arabidopsis thaliana protein match is: APS reductase 1 (TAIR:AT4G04610.1). & (gnl|cdd|35410 : 331.0) no description available & (gnl|cdd|80937 : 242.0) no description available & (reliability: 1242.0) & (original description: Putative apr, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T
'14.3' 'S-assimilation.sulfite redox' 'niben101scf00487_751351-757210' '(at5g04590 : 1020.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35780 : 767.0) no description available & (gnl|cdd|30504 : 418.0) no description available & (p17847|nir_maize : 97.1) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) (Fragment) - Zea mays (Maize) & (reliability: 2040.0) & (original description: Putative SIR1, Description = Sulfite reductase 1 [ferredoxin], chloroplastic, PFAM = PF01077;PF01077;PF03460;PF03460)' T
'14.3' 'S-assimilation.sulfite redox' 'niben101scf07825_631002-636995' '(at5g04590 : 1018.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35780 : 763.0) no description available & (gnl|cdd|30504 : 418.0) no description available & (p17847|nir_maize : 97.8) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) (Fragment) - Zea mays (Maize) & (reliability: 2036.0) & (original description: Putative SIR1, Description = Sulfite reductase 1 [ferredoxin], chloroplastic, PFAM = PF03460;PF03460;PF01077;PF01077)' T
'14.5' 'S-assimilation.sulfite oxidase' 'niben044scf00000370ctg010_375-2914' '(at3g01910 : 204.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|35755 : 163.0) no description available & (gnl|cdd|29406 : 144.0) no description available & (reliability: 408.0) & (original description: Putative suox, Description = Sulfite oxidase, PFAM = PF00174)' T
'14.5' 'S-assimilation.sulfite oxidase' 'niben101scf14939_146721-176352' '(at3g01910 : 642.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|35755 : 492.0) no description available & (gnl|cdd|29406 : 478.0) no description available & (p27968|nia7_horvu : 204.0) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) - Hordeum vulgare (Barley) & (reliability: 1284.0) & (original description: Putative SOX, Description = Sulfite oxidase, PFAM = PF03404;PF00174)' T
'14.10' 'S-assimilation.S-scavenging' '' ''
'14.15' 'S-assimilation.AKN' 'niben101scf00853_448202-461529' '(o49204|kaps_catro : 399.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35854 : 346.0) no description available & (at2g14750 : 330.0) Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability.; APS kinase (APK); CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS-kinase 2 (TAIR:AT4G39940.1); Has 5042 Blast hits to 5042 proteins in 1485 species: Archae - 54; Bacteria - 2991; Metazoa - 244; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|30875 : 280.0) no description available & (reliability: 660.0) & (original description: Putative AKN, Description = Adenylyl-sulfate kinase, chloroplastic, PFAM = PF01583)' T
'14.15' 'S-assimilation.AKN' 'niben101scf00991_331763-337668' '(o49204|kaps_catro : 404.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35854 : 346.0) no description available & (at2g14750 : 335.0) Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability.; APS kinase (APK); CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS-kinase 2 (TAIR:AT4G39940.1); Has 5042 Blast hits to 5042 proteins in 1485 species: Archae - 54; Bacteria - 2991; Metazoa - 244; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|30875 : 280.0) no description available & (reliability: 670.0) & (original description: Putative AKN, Description = Adenylyl-sulfate kinase, chloroplastic, PFAM = PF01583)' T
'14.15' 'S-assimilation.AKN' 'niben101scf02235_524355-529173' '(at3g03900 : 355.0) Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.; adenosine-5'-phosphosulfate (APS) kinase 3 (APK3); FUNCTIONS IN: transferase activity, transferring phosphorus-containing groups, kinase activity, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 5006 Blast hits to 5006 proteins in 1478 species: Archae - 56; Bacteria - 2976; Metazoa - 240; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35854 : 346.0) no description available & (o49204|kaps_catro : 313.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|30875 : 273.0) no description available & (reliability: 710.0) & (original description: Putative APK3, Description = Adenylyl-sulfate kinase 3, PFAM = PF01583)' T
'14.15' 'S-assimilation.AKN' 'niben101scf04422_1577733-1582515' '(at3g03900 : 350.0) Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.; adenosine-5'-phosphosulfate (APS) kinase 3 (APK3); FUNCTIONS IN: transferase activity, transferring phosphorus-containing groups, kinase activity, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 5006 Blast hits to 5006 proteins in 1478 species: Archae - 56; Bacteria - 2976; Metazoa - 240; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35854 : 342.0) no description available & (o49204|kaps_catro : 312.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|30875 : 271.0) no description available & (reliability: 700.0) & (original description: Putative APK3, Description = Adenylyl-sulfate kinase 3, PFAM = PF01583)' T
'14.1001' 'Mineral Nutrition' 'sulfate' 'Mineral Nutrition' M
'15' 'metal handling' 'nbv0.3scaffold585_1234-4749' '(at5g27690 : 85.1) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative At3g06130, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T
'15' 'metal handling' 'nbv0.3scaffold2498_76061-81798' '(gnl|cdd|69230 : 813.0) no description available & (at4g14040 : 790.0) selenium-binding protein 2 (SBP2); FUNCTIONS IN: selenium binding; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), Selenium-binding protein (InterPro:IPR008826); BEST Arabidopsis thaliana protein match is: selenium-binding protein 1 (TAIR:AT4G14030.2); Has 907 Blast hits to 897 proteins in 207 species: Archae - 39; Bacteria - 194; Metazoa - 215; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|36136 : 774.0) no description available & (reliability: 1580.0) & (original description: Putative SBP1, Description = Selenium-binding protein 1-like protein, PFAM = PF05694)' T
'15' 'metal handling' 'nbv0.3scaffold16781_1915-8597' '(at5g19140 : 376.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 340.0) no description available & (p24805|tsjt1_tobac : 132.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 752.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T
'15' 'metal handling' 'nbv0.3scaffold44951_11079-21570' '(at5g58640 : 246.0) Selenoprotein, Rdx type; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein T (InterPro:IPR019389), Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: SELT-like protein precursor (TAIR:AT3G47300.1); Has 232 Blast hits to 232 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38496 : 238.0) no description available & (reliability: 492.0) & (original description: Putative At3g47300, Description = SelT-like protein, PFAM = PF10262)' T
'15' 'metal handling' 'nbv0.5scaffold3956_140627-151465' '(at5g58640 : 237.0) Selenoprotein, Rdx type; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein T (InterPro:IPR019389), Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: SELT-like protein precursor (TAIR:AT3G47300.1); Has 232 Blast hits to 232 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38496 : 226.0) no description available & (reliability: 474.0) & (original description: Putative At3g47300, Description = SelT-like protein, PFAM = PF10262)' T
'15' 'metal handling' 'niben101scf00369_493625-497047' '(at5g27690 : 94.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative RCOM_1433240, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T
'15' 'metal handling' 'niben101scf00594_284651-287333' '(at5g19140 : 270.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 259.0) no description available & (p24805|tsjt1_tobac : 102.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 540.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T
'15' 'metal handling' 'niben101scf01520_469793-478233' '(at5g19140 : 378.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 338.0) no description available & (p24805|tsjt1_tobac : 132.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 756.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T
'15' 'metal handling' 'niben101scf02945_91517-96817' '(at4g16120 : 815.0) putative membrane-anchored cell wall protein; COBRA-like protein-7 precursor (COBL7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, Golgi apparatus, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 8 precursor (TAIR:AT3G16860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 288.0) no description available & (q6z4g8|cobl1_orysa : 139.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (reliability: 1504.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T
'15' 'metal handling' 'niben101scf03584_734054-743895' '(at4g19070 : 109.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative At4g19070, Description = Cadmium-induced protein AS8, PFAM = )' T
'15' 'metal handling' 'niben101scf03584_741245-744022' '(at4g19070 : 111.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At4g19070, Description = Cadmium-induced protein AS8, PFAM = )' T
'15' 'metal handling' 'niben101scf03888_33158-39392' '(gnl|cdd|69230 : 824.0) no description available & (at4g14030 : 801.0) selenium-binding protein 1 (SBP1); FUNCTIONS IN: selenium binding; INVOLVED IN: response to cadmium ion, response to hydrogen peroxide, cellular response to selenium ion, sulfate assimilation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), Selenium-binding protein (InterPro:IPR008826); BEST Arabidopsis thaliana protein match is: selenium-binding protein 2 (TAIR:AT4G14040.1). & (gnl|cdd|36136 : 788.0) no description available & (reliability: 1602.0) & (original description: Putative sbp, Description = Selenium binding protein, PFAM = PF05694)' T
'15' 'metal handling' 'niben101scf06677_1687-6796' '(at4g19070 : 105.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative Sb05g020715, Description = Putative uncharacterized protein Sb05g020715, PFAM = )' T
'15' 'metal handling' 'niben101scf10524_303698-307213' '(at5g27690 : 95.9) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T
'15' 'metal handling' 'niben101scf12954_324376-327772' '(at5g27690 : 92.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative At5g27690, Description = Putative heavy-metal-associated domain-containing protein, PFAM = PF00403)' T
'15.1' 'metal handling.acquisition' 'nbv0.3scaffold11072_14004-20858' '(at5g23980 : 796.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.; ferric reduction oxidase 4 (FRO4); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction, N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 5 (TAIR:AT5G23990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 299.0) no description available & (gnl|cdd|85683 : 84.9) no description available & (reliability: 1592.0) & (original description: Putative FRO5, Description = Ferric reduction oxidase 5, PFAM = PF08030;PF01794;PF08022)' T
'15.1' 'metal handling.acquisition' 'nbv0.3scaffold41893_3271-6429' '(at1g01580 : 201.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 92.0) no description available & (reliability: 402.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = )' T
'15.1' 'metal handling.acquisition' 'nbv0.3scaffold52884_248-6020' '(at5g49730 : 809.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 303.0) no description available & (gnl|cdd|85683 : 89.9) no description available & (reliability: 1618.0) & (original description: Putative FRO7, Description = Ferric reduction oxidase 7, chloroplastic, PFAM = PF08022;PF01794;PF08030)' T
'15.1' 'metal handling.acquisition' 'nbv0.5scaffold4244_130249-138153' '(at5g23980 : 716.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.; ferric reduction oxidase 4 (FRO4); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction, N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 5 (TAIR:AT5G23990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 290.0) no description available & (gnl|cdd|87432 : 87.2) no description available & (reliability: 1432.0) & (original description: Putative FRO5, Description = Ferric reduction oxidase 5, PFAM = PF08022;PF01794;PF08030)' T
'15.1' 'metal handling.acquisition' 'nbv0.5scaffold5236_27507-36517' '(at1g01580 : 649.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 298.0) no description available & (gnl|cdd|87432 : 86.1) no description available & (reliability: 1298.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = PF08022;PF01794;PF08030)' T
'15.1' 'metal handling.acquisition' 'nbv0.5scaffold5236_43537-49356' '(at1g01580 : 738.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 300.0) no description available & (gnl|cdd|87432 : 98.0) no description available & (reliability: 1476.0) & (original description: Putative FRO2, Description = Ferric reduction oxidase 2, PFAM = PF08030;PF01794;PF08022)' T
'15.1' 'metal handling.acquisition' 'niben044scf00023137ctg008_1-2913' '(at1g01580 : 186.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 93.1) no description available & (reliability: 372.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = )' T
'15.1' 'metal handling.acquisition' 'niben044scf00029818ctg002_1-3861' '(at1g01580 : 483.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 220.0) no description available & (gnl|cdd|87432 : 88.4) no description available & (reliability: 966.0) & (original description: Putative fro1, Description = Ferric reduction oxidase 2, PFAM = PF08030;PF08022)' T
'15.1' 'metal handling.acquisition' 'niben101scf02509_36895-42785' '(at3g08040 : 543.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 155.0) no description available & (gnl|cdd|36561 : 151.0) no description available & (reliability: 1086.0) & (original description: Putative DTX42, Description = Protein DETOXIFICATION 42, PFAM = PF01554;PF01554)' T
'15.1' 'metal handling.acquisition' 'niben101scf03005_399650-405292' '(at3g08040 : 544.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 156.0) no description available & (gnl|cdd|36561 : 150.0) no description available & (reliability: 1088.0) & (original description: Putative DTX43, Description = Protein DETOXIFICATION 43, PFAM = PF01554;PF01554)' T
'15.1' 'metal handling.acquisition' 'niben101scf03021_287256-314641' '(at5g49730 : 802.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 303.0) no description available & (gnl|cdd|85683 : 89.5) no description available & (reliability: 1604.0) & (original description: Putative FRO3, Description = Ferric-chelate reductase, putative, PFAM = PF08030;PF01794;PF08022)' T
'15.1' 'metal handling.acquisition' 'niben101scf03021_287906-293317' '(at5g49730 : 837.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 309.0) no description available & (gnl|cdd|85683 : 91.1) no description available & (reliability: 1674.0) & (original description: Putative FRO7, Description = Ferric reduction oxidase 7, chloroplastic, PFAM = PF08022;PF01794;PF08030)' T
'15.1' 'metal handling.acquisition' 'niben101scf03114_831323-839916' '(at5g23990 : 330.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.; ferric reduction oxidase 5 (FRO5); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: shoot, flower; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 4 (TAIR:AT5G23980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative fro1, Description = Ferric-chelate reductase, PFAM = PF08030)' T
'15.1' 'metal handling.acquisition' 'niben101scf07576_190352-197157' '(at1g01580 : 751.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 313.0) no description available & (gnl|cdd|87432 : 98.4) no description available & (reliability: 1502.0) & (original description: Putative FRO2, Description = Ferric reduction oxidase 2, PFAM = PF01794;PF08022;PF08030)' T
'15.1' 'metal handling.acquisition' 'niben101scf22566_21955-24191' '(at3g15352 : 88.6) Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.; cytochrome c oxidase 17 (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: response to bacterium, response to copper ion; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase copper chaperone (COX17) (TAIR:AT1G53030.1); Has 294 Blast hits to 294 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 51; Plants - 55; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative cox17, Description = Cytochrome c oxidase copper chaperone, PFAM = PF05051)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold15751_16932-26171' '(at5g50740 : 155.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 310.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold22337_26867-31343' '(q9spv5|nec1_nicpl : 316.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 279.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 542.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold23944_1945-5598' '(q9spv5|nec1_nicpl : 297.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 268.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 107.0) no description available & (reliability: 514.0) & (original description: Putative Os05g0277500, Description = Germin-like protein 5-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold25706_12125-16600' '(at5g24580 : 222.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold93227_198-4759' '(q8h1t3|fri2_tobac : 449.0) Ferritin-2, chloroplast precursor (EC 1.16.3.1) (NtFer2) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 335.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|37543 : 219.0) no description available & (gnl|cdd|29783 : 212.0) no description available & (reliability: 670.0) & (original description: Putative FER2, Description = Ferritin-2, chloroplastic, PFAM = PF00210)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold838_266243-269776' '(q9spv5|nec1_nicpl : 225.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 207.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 96.1) no description available & (reliability: 406.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold2877_71019-75805' '(at1g66240 : 106.0) homolog of anti-oxidant 1 (ATX1); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 212.0) & (original description: Putative ATX1, Description = Copper transport protein ATX1, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold2958_27021-31662' '(at2g37390 : 121.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 242.0) & (original description: Putative BnaA04g21380D, Description = BnaA04g21380D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold6018_79796-84013' '(at2g18196 : 233.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BnaA07g15730D, Description = BnaA07g15730D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold6310_15374-19372' '(at5g24580 : 181.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00000729ctg003_220-2999' '(at1g30470 : 97.8) SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1). & (reliability: 195.6) & (original description: Putative BnaA09g26080D, Description = BnaA09g26080D protein, PFAM = )' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00010135ctg006_64849-67760' '(at1g71050 : 175.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1285 Blast hits to 1219 proteins in 68 species: Archae - 2; Bacteria - 24; Metazoa - 2; Fungi - 25; Plants - 1232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative HIPP20, Description = Heavy metal-associated isoprenylated plant protein 20, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00011374ctg017_1-1982' '(q9spv5|nec1_nicpl : 207.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 189.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.0) no description available & (reliability: 376.0) & (original description: Putative Ger, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1430.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1448.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00018717ctg003_1-3068' '(at3g13110 : 259.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 214.0) no description available & (gnl|cdd|83739 : 171.0) no description available & (reliability: 508.0) & (original description: Putative cysE, Description = Serine acetyltransferase, PFAM = PF06426)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben044scf00027922ctg000_1-4340' '(at2g18196 : 207.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BnaA07g15730D, Description = BnaA07g15730D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00133_103110-106979' '(q8rx97|fri1_tobac : 449.0) Ferritin-1, chloroplast precursor (EC 1.16.3.1) (NtFer1) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 322.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|29783 : 214.0) no description available & (gnl|cdd|37543 : 212.0) no description available & (reliability: 644.0) & (original description: Putative FER1, Description = Ferritin-1, chloroplastic, PFAM = PF00210)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1432.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00308_109613-113223' '(at4g27590 : 127.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 739 Blast hits to 739 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 735; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At4g27590, Description = Heavy metal associated domain-containing protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00308_117552-122734' '(at5g24580 : 227.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaC02g41180D, Description = BnaC02g41180D protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00332_899102-902052' '(gnl|cdd|66715 : 440.0) no description available & (at1g09240 : 382.0) Encodes a nicotianamine synthase.; nicotianamine synthase 3 (NAS3); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 4 (TAIR:AT1G56430.1); Has 198 Blast hits to 195 proteins in 46 species: Archae - 20; Bacteria - 10; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q9fxw5|nas3_orysa : 311.0) Nicotianamine synthase 3 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 3) (OsNAS3) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: Putative CHLN, Description = Nicotianamine synthase, PFAM = PF03059)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1452.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf00669_74407-79688' '(at2g37390 : 133.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 266.0) & (original description: Putative BnaA04g21380D, Description = BnaA04g21380D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01237_328355-340368' '(q8h1t3|fri2_tobac : 449.0) Ferritin-2, chloroplast precursor (EC 1.16.3.1) (NtFer2) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 336.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|37543 : 219.0) no description available & (gnl|cdd|29783 : 211.0) no description available & (reliability: 672.0) & (original description: Putative FER2, Description = Ferritin-2, chloroplastic, PFAM = PF00210)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01640_429927-433465' '(at1g22990 : 172.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative fp2, Description = Farnesylated protein 2, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01664_318270-321077' '(at4g38580 : 207.0) putative farnesylated protein (At4g38580) mRNA, complete; farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01710_143288-146366' '(at1g06330 : 159.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01775_130911-135651' '(q9spv5|nec1_nicpl : 276.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 237.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 104.0) no description available & (reliability: 462.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1448.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01870_943990-946883' '(at4g08570 : 178.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Heavy-metal-associated, conserved site (InterPro:IPR017969); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1185 Blast hits to 1127 proteins in 62 species: Archae - 2; Bacteria - 41; Metazoa - 2; Fungi - 0; Plants - 1133; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf01920_17614-22902' '(at1g66240 : 107.0) homolog of anti-oxidant 1 (ATX1); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 214.0) & (original description: Putative ATX1, Description = Copper transport protein ATX1, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02128_85826-89055' '(at5g02600 : 99.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative NAKR3, Description = Chloroplast-targeted copper chaperone protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02245_247245-250072' '(at1g22990 : 170.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative HIPP22, Description = Heavy metal-associated isoprenylated plant protein 22, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_300337-303358' '(q9spv5|nec1_nicpl : 218.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 201.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 89.2) no description available & (reliability: 386.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_300376-350936' '(q9spv5|nec1_nicpl : 213.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 199.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 90.0) no description available & (reliability: 388.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_345604-348861' '(q9spv5|nec1_nicpl : 231.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 217.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 98.8) no description available & (reliability: 414.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_345640-348927' '(q9spv5|nec1_nicpl : 228.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 216.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 97.7) no description available & (reliability: 420.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1438.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02513_984212-987412' '(at5g02600 : 99.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400012592, Description = Metal ion binding protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02621_468891-474671' '(at4g38580 : 245.0) putative farnesylated protein (At4g38580) mRNA, complete; farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02714_566608-569954' '(q9spv5|nec1_nicpl : 404.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 259.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 506.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf02983_278842-282129' '(at4g27590 : 146.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 739 Blast hits to 739 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 735; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaA01g16590D, Description = BnaA01g16590D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf03026_395193-398396' '(at4g39700 : 170.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf03160_284367-286264' '(at3g62020 : 127.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9s8p4|rhre_pea : 127.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (gnl|cdd|84597 : 86.5) no description available & (reliability: 250.0) & (original description: Putative Os09g0568600, Description = Putative germin-like protein 9-2, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf03160_286265-288171' '(at1g02335 : 119.0) germin-like protein subfamily 2 member 2 precursor (GL22); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 2264 Blast hits to 2183 proteins in 312 species: Archae - 0; Bacteria - 520; Metazoa - 1; Fungi - 98; Plants - 1608; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 116.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 80.3) no description available & (reliability: 238.0) & (original description: Putative Os09g0568700, Description = Germin-like protein 9-3, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf03309_791377-796187' '(at1g06330 : 137.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36816 : 80.8) no description available & (reliability: 274.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf03576_274067-277750' '(at5g63530 : 184.0) Farnesylated protein that binds metals.; farnesylated protein 3 (FP3); FUNCTIONS IN: transition metal ion binding, metal ion binding; INVOLVED IN: cellular transition metal ion homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 5078 Blast hits to 3127 proteins in 372 species: Archae - 4; Bacteria - 284; Metazoa - 1364; Fungi - 240; Plants - 2332; Viruses - 113; Other Eukaryotes - 741 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1442.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf04841_142014-144856' '(at1g71050 : 176.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1285 Blast hits to 1219 proteins in 68 species: Archae - 2; Bacteria - 24; Metazoa - 2; Fungi - 25; Plants - 1232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative HIPP20, Description = Heavy metal-associated isoprenylated plant protein 20, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05283_35366-54200' '(at1g30470 : 829.0) SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1). & (gnl|cdd|37284 : 491.0) no description available & (gnl|cdd|68084 : 321.0) no description available & (reliability: 1658.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = PF04499;PF04499)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05516_453639-465842' '(at5g44070 : 619.0) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.; CADMIUM SENSITIVE 1 (CAD1); FUNCTIONS IN: cadmium ion binding, copper ion binding, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 2 (TAIR:AT1G03980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35851 : 462.0) no description available & (gnl|cdd|68592 : 243.0) no description available & (reliability: 1238.0) & (original description: Putative pcs8, Description = Phytochelatin synthase, PFAM = PF05023;PF09328)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05581_77687-80874' '(at1g55920 : 399.0) Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;1 (SERAT2;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cellular response to sulfate starvation, response to cold; LOCATED IN: cytosol, chloroplast, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 24449 Blast hits to 24415 proteins in 2638 species: Archae - 407; Bacteria - 18561; Metazoa - 8; Fungi - 223; Plants - 250; Viruses - 18; Other Eukaryotes - 4982 (source: NCBI BLink). & (gnl|cdd|39947 : 347.0) no description available & (gnl|cdd|83739 : 281.0) no description available & (reliability: 798.0) & (original description: Putative sat1, Description = Serine acetyltransferase 1, PFAM = PF00132;PF06426)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05764_389845-399131' '(at4g36390 : 859.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 854.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (gnl|cdd|37703 : 689.0) no description available & (gnl|cdd|30966 : 398.0) no description available & (reliability: 1718.0) & (original description: Putative miaB, Description = CDK5RAP1-like protein, PFAM = PF00919;PF04055;PF01938)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_378488-381730' '(q9spv5|nec1_nicpl : 305.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 260.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 106.0) no description available & (reliability: 516.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_489418-494972' '(q9spv5|nec1_nicpl : 233.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 215.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (reliability: 418.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_489562-522189' '(q9spv5|nec1_nicpl : 229.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 211.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.6) no description available & (reliability: 422.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf06423_30036-101048' '(at5g50740 : 92.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 184.8) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf06423_97702-107242' '(at5g50740 : 115.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 230.0) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf06516_531066-536535' '(at2g33740 : 204.0) encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.; CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2474 Blast hits to 2474 proteins in 915 species: Archae - 144; Bacteria - 1534; Metazoa - 199; Fungi - 5; Plants - 49; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|38548 : 144.0) no description available & (gnl|cdd|79985 : 138.0) no description available & (reliability: 408.0) & (original description: Putative CUTA, Description = Protein CutA, chloroplastic, PFAM = PF03091)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf06551_35551-39597' '(at4g39700 : 162.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf07036_108654-111138' '(at2g18196 : 206.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaC06g21490D, Description = BnaC06g21490D protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf07236_39501-48466' '(at5g50740 : 171.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 342.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf08149_347291-351038' '(at5g50740 : 187.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 374.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf08415_188228-193438' '(at3g48970 : 147.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 948 Blast hits to 923 proteins in 65 species: Archae - 2; Bacteria - 55; Metazoa - 0; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At3g48970, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf08527_236027-241493' '(at2g33740 : 201.0) encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.; CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2474 Blast hits to 2474 proteins in 915 species: Archae - 144; Bacteria - 1534; Metazoa - 199; Fungi - 5; Plants - 49; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|38548 : 147.0) no description available & (gnl|cdd|79985 : 138.0) no description available & (reliability: 402.0) & (original description: Putative cutA, Description = Divalent-cation tolerance protein CutA, PFAM = PF03091)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf08774_106122-109248' '(at2g37390 : 108.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 216.0) & (original description: Putative TCM_041919, Description = Chloroplast-targeted copper chaperone protein, putative, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf09015_74401-78828' '(at5g17450 : 139.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf09355_362160-365122' '(gnl|cdd|66715 : 434.0) no description available & (at1g09240 : 380.0) Encodes a nicotianamine synthase.; nicotianamine synthase 3 (NAS3); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 4 (TAIR:AT1G56430.1); Has 198 Blast hits to 195 proteins in 46 species: Archae - 20; Bacteria - 10; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q9xfb7|nas9_horvu : 313.0) Nicotianamine synthase 9 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 9) - Hordeum vulgare (Barley) & (reliability: 760.0) & (original description: Putative CHLN, Description = Nicotianamine synthase, PFAM = PF03059)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf10219_65401-69095' '(at1g06330 : 137.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36816 : 80.0) no description available & (reliability: 274.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf11182_21120-46376' '(at5g50740 : 125.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 250.0) & (original description: Putative FP3, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00403;PF00403;PF00582)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf11182_42423-46693' '(at5g50740 : 110.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 220.0) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf12504_113086-117272' '(at5g50740 : 182.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 364.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf13029_426570-431983' '(at3g56240 : 107.0) CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.; copper chaperone (CCH); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: homolog of anti-oxidant 1 (TAIR:AT1G66240.1); Has 2051 Blast hits to 1937 proteins in 366 species: Archae - 10; Bacteria - 382; Metazoa - 168; Fungi - 207; Plants - 1221; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative CCH, Description = Copper transport protein CCH, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1414.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf15666_130293-133841' '(at5g24580 : 214.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf16189_65374-68447' '(at3g13110 : 416.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 349.0) no description available & (gnl|cdd|83739 : 286.0) no description available & (reliability: 794.0) & (original description: Putative sat4, Description = Serine acetyltransferase 4, PFAM = PF06426;PF00132;PF00132)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf18745_18830-22377' '(at1g22990 : 174.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative HIPP22, Description = Heavy metal-associated isoprenylated plant protein 22, PFAM = PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf22566_21955-24191' '(at3g15352 : 88.6) Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.; cytochrome c oxidase 17 (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: response to bacterium, response to copper ion; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase copper chaperone (COX17) (TAIR:AT1G53030.1); Has 294 Blast hits to 294 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 51; Plants - 55; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative cox17, Description = Cytochrome c oxidase copper chaperone, PFAM = PF05051)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf26202_33294-50813' '(at5g50740 : 134.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 268.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T
'15.2' 'metal handling.binding, chelation and storage' 'niben101scf30958_62316-66344' '(at3g24450 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.1); Has 769 Blast hits to 747 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 757; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative Os01g0719600, Description = Os01g0719600 protein, PFAM = PF00403)' T
'15.3' 'metal handling.regulation' 'nbv0.3scaffold46930_3658-9342' '(at2g01770 : 306.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 277.0) no description available & (gnl|cdd|39674 : 246.0) no description available & (reliability: 612.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T
'15.3' 'metal handling.regulation' 'niben101scf00309_576643-585193' '(at4g14710 : 348.0) ATARD2; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Acireductone dioxygenase, ARD (InterPro:IPR004313), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1). & (q58fk4|ard2_orysa : 321.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (gnl|cdd|37318 : 284.0) no description available & (gnl|cdd|66734 : 218.0) no description available & (reliability: 696.0) & (original description: Putative adi1, Description = 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, PFAM = PF03079)' T
'15.3' 'metal handling.regulation' 'niben101scf05972_293727-303712' '(at4g14710 : 352.0) ATARD2; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Acireductone dioxygenase, ARD (InterPro:IPR004313), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1). & (q58fk4|ard2_orysa : 319.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (gnl|cdd|37318 : 289.0) no description available & (gnl|cdd|66734 : 222.0) no description available & (reliability: 704.0) & (original description: Putative adi1, Description = 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, PFAM = PF03079)' T
'15.3' 'metal handling.regulation' 'niben101scf08368_56013-61426' '(at2g01770 : 329.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 281.0) no description available & (gnl|cdd|39674 : 250.0) no description available & (reliability: 658.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T
'15.3' 'metal handling.regulation' 'niben101scf09455_135268-147340' '(at2g37330 : 383.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 182.0) no description available & (reliability: 766.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T
'15.3' 'metal handling.regulation' 'niben101scf11254_55574-68693' '(at2g37330 : 377.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 180.0) no description available & (reliability: 754.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T
'16' 'secondary metabolism' '' ''
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold16576_14732-23813' '(gnl|cdd|35718 : 1128.0) no description available & (at1g78950 : 1012.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 647.0) no description available & (reliability: 1862.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1948.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold47462_1081-11385' '(gnl|cdd|35718 : 1291.0) no description available & (at1g78950 : 1234.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 862.0) no description available & (reliability: 2430.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold66543_2344-8559' '(at2g26250 : 843.0) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.; 3-ketoacyl-CoA synthase 10 (KCS10); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 1723 Blast hits to 1687 proteins in 351 species: Archae - 0; Bacteria - 632; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|87517 : 488.0) no description available & (reliability: 1686.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold76442_2054-6131' '(at3g11950 : 399.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 798.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold81729_2321-6577' '(gnl|cdd|29478 : 569.0) no description available & (q40577|5eas_tobac : 532.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 373.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 680.0) & (original description: Putative TPS3, Description = Probable terpene synthase 3, PFAM = PF03936;PF01397)' T
'16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold93197_1880-4658' '(q40577|5eas_tobac : 356.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 213.0) no description available & (at3g29410 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF01397)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben044scf00004447ctg007_3991-8389' '(q40577|5eas_tobac : 689.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 458.0) no description available & (at5g23960 : 287.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 534.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF03936;PF01397)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben044scf00023720ctg009_17629-27746' '(gnl|cdd|35718 : 1254.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 831.0) no description available & (reliability: 2354.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben044scf00041813ctg004_1-6218' '(gnl|cdd|35718 : 995.0) no description available & (at1g78950 : 919.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 742.0) no description available & (reliability: 1814.0) & (original description: Putative bAS, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben044scf00055581ctg000_5015-9471' '(q40577|5eas_tobac : 375.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 233.0) no description available & (at3g14520 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative HRR8, Description = Putative 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf00712_190713-195062' '(q40577|5eas_tobac : 712.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 468.0) no description available & (at5g23960 : 296.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 534.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936;PF03936)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf00739_497104-548028' '(gnl|cdd|35718 : 1290.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 855.0) no description available & (reliability: 2340.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf01660_285254-289336' '(gnl|cdd|29478 : 199.0) no description available & (p93665|dcs1_goshi : 165.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at3g14520 : 117.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative tps1, Description = Terpene synthase, PFAM = PF03936)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf01818_63731-67546' '(at3g11950 : 380.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 760.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf01827_311832-318425' '(at2g26250 : 833.0) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.; 3-ketoacyl-CoA synthase 10 (KCS10); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 1723 Blast hits to 1687 proteins in 351 species: Archae - 0; Bacteria - 632; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|87517 : 480.0) no description available & (reliability: 1666.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1136.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf05405_890933-895003' '(at3g11950 : 397.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 794.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T
'16.1' 'secondary metabolism.isoprenoids' 'niben101scf16511_86672-90928' '(gnl|cdd|29478 : 596.0) no description available & (q40577|5eas_tobac : 558.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 388.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 726.0) & (original description: Putative TPS32, Description = Viridiflorene synthase, PFAM = PF03936;PF01397)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'nbv0.3scaffold81608_745-6844' '(at2g39550 : 303.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 262.0) no description available & (gnl|cdd|29794 : 225.0) no description available & (reliability: 606.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'nbv0.5scaffold6785_32234-40463' '(at2g39550 : 435.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 391.0) no description available & (gnl|cdd|29794 : 334.0) no description available & (q04903|pftb_pea : 120.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 870.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben044scf00008832ctg005_1-4914' '(gnl|cdd|35587 : 395.0) no description available & (at5g12210 : 389.0) RAB geranylgeranyl transferase beta subunit 1; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29793 : 378.0) no description available & (q04903|pftb_pea : 93.2) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 778.0) & (original description: Putative RGTB1, Description = Geranylgeranyl transferase type-2 subunit beta 1, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben044scf00017250ctg002_1-5563' '(at2g39550 : 276.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 235.0) no description available & (gnl|cdd|29794 : 197.0) no description available & (reliability: 552.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf00744_216307-225318' '(at4g24490 : 577.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35749 : 251.0) no description available & (gnl|cdd|35095 : 147.0) no description available & (o24304|pfta_pea : 82.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (reliability: 1154.0) & (original description: Putative RGTA1, Description = Geranylgeranyl transferase type-2 subunit alpha 1, PFAM = PF01239;PF01239;PF01239;PF01239;PF01239)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf03403_80984-91481' '(at4g24490 : 575.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35749 : 250.0) no description available & (gnl|cdd|35095 : 146.0) no description available & (o24304|pfta_pea : 80.9) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (reliability: 1150.0) & (original description: Putative RGTA1, Description = Geranylgeranyl transferase type-2 subunit alpha 1, PFAM = PF01239;PF01239;PF01239;PF01239;PF01239)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf05206_334818-343303' '(at2g39550 : 337.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 295.0) no description available & (gnl|cdd|29794 : 246.0) no description available & (q04903|pftb_pea : 84.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 674.0) & (original description: Putative NtbetaGG, Description = Protein geranylgeranyltransferase beta-subunit, PFAM = PF00432;PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf06249_291838-295165' '(at1g74470 : 746.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (gnl|cdd|30989 : 184.0) no description available & (reliability: 1492.0) & (original description: Putative CHLP, Description = Geranylgeranyl diphosphate reductase, chloroplastic, PFAM = PF01494)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf06359_86713-95978' '(at2g39550 : 444.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 390.0) no description available & (gnl|cdd|29794 : 336.0) no description available & (q04903|pftb_pea : 124.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 888.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf08918_213006-216364' '(at1g74470 : 519.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (gnl|cdd|30989 : 186.0) no description available & (reliability: 1038.0) & (original description: Putative chlp, Description = Geranylgeranyl diphosphate reductase, PFAM = )' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf09028_38103-47013' '(at5g12210 : 525.0) RAB geranylgeranyl transferase beta subunit 1; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35587 : 522.0) no description available & (gnl|cdd|29793 : 459.0) no description available & (q04903|pftb_pea : 119.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 1050.0) & (original description: Putative RGTB1, Description = Geranylgeranyl transferase type-2 subunit beta 1, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T
'16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf09554_134349-138394' '(gnl|cdd|29216 : 162.0) no description available & (at5g15460 : 149.0) membrane-anchored ubiquitin-fold protein 2 (MUB2); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 1 precursor (TAIR:AT3G01050.1); Has 168 Blast hits to 168 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z8k4|mub3_orysa : 135.0) Membrane-anchored ubiquitin-fold protein 3 precursor (Membrane-anchored ub-fold protein 3) (OsMUB3) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative MUB1, Description = Membrane-anchored ubiquitin-fold protein 1, PFAM = PF13881)' T
'16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben044scf00009504ctg017_1008-3881' '(at5g11380 : 284.0) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.; 1-deoxy-D-xylulose 5-phosphate synthase 3 (DXPS3); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: terpenoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 11671 Blast hits to 11637 proteins in 2411 species: Archae - 101; Bacteria - 6667; Metazoa - 252; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 4446 (source: NCBI BLink). & (o78328|dxs_capan : 259.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (gnl|cdd|81594 : 226.0) no description available & (gnl|cdd|35743 : 194.0) no description available & (reliability: 568.0) & (original description: Putative dxs, Description = 1-deoxy-D-xylulose-5-phosphate synthase, PFAM = PF02780;PF02779)' T
'16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf00246_435992-442110' '(o78328|dxs_capan : 1369.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (at4g15560 : 1226.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (gnl|cdd|81594 : 926.0) no description available & (gnl|cdd|35743 : 687.0) no description available & (reliability: 2452.0) & (original description: Putative TKT2, Description = Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic, PFAM = PF02779;PF13292;PF02780)' T
'16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf02399_121272-128677' '(o22567|dxs_orysa : 1012.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice) & (at4g15560 : 995.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (gnl|cdd|81594 : 904.0) no description available & (gnl|cdd|35743 : 589.0) no description available & (reliability: 1990.0) & (original description: Putative dxs2, Description = 1-deoxy-D-xylulose 5-phosphate synthase 2, PFAM = PF02779;PF02780;PF13292)' T
'16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf06579_266447-277759' '(at5g11380 : 817.0) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.; 1-deoxy-D-xylulose 5-phosphate synthase 3 (DXPS3); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: terpenoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 11671 Blast hits to 11637 proteins in 2411 species: Archae - 101; Bacteria - 6667; Metazoa - 252; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 4446 (source: NCBI BLink). & (o78328|dxs_capan : 641.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (gnl|cdd|81594 : 548.0) no description available & (gnl|cdd|35743 : 453.0) no description available & (reliability: 1634.0) & (original description: Putative dxs, Description = Chloroplast 1-deoxy-D-xylulose-5-phosphate synthase, PFAM = PF02780;PF13292;PF02779)' T
'16.1.1.2' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXR' 'niben101scf01764_326407-337560' '(q8w250|dxr_orysa : 764.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (at5g62790 : 756.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (gnl|cdd|81597 : 557.0) no description available & (reliability: 1512.0) & (original description: Putative DXR, Description = 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic, PFAM = PF08436;PF02670;PF13288)' T
'16.1.1.2' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXR' 'niben101scf10366_80726-88302' '(q8w250|dxr_orysa : 765.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (at5g62790 : 754.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (gnl|cdd|81597 : 557.0) no description available & (reliability: 1508.0) & (original description: Putative DXR, Description = 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic, PFAM = PF08436;PF02670;PF13288)' T
'16.1.1.3' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMS' 'niben101scf00705_121023-127541' '(at2g02500 : 373.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|80552 : 242.0) no description available & (reliability: 746.0) & (original description: Putative ispD, Description = 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, PFAM = PF01128)' T
'16.1.1.3' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMS' 'niben101scf06862_133487-140494' '(at2g02500 : 375.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|80552 : 245.0) no description available & (reliability: 750.0) & (original description: Putative ISPD, Description = 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, PFAM = PF01128)' T
'16.1.1.4' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMK' 'niben101scf04558_352793-363126' '(at2g26930 : 481.0) Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.; 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK); FUNCTIONS IN: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (InterPro:IPR004424), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 6617 Blast hits to 6617 proteins in 2226 species: Archae - 3; Bacteria - 4583; Metazoa - 0; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 1960 (source: NCBI BLink). & (gnl|cdd|32130 : 222.0) no description available & (reliability: 962.0) & (original description: Putative ISPE, Description = 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic, PFAM = PF00288)' T
'16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'nbv0.3scaffold74521_1-6571' '(q9m4w3|ispf_catro : 176.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 169.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 139.0) no description available & (gnl|cdd|35477 : 90.3) no description available & (reliability: 338.0) & (original description: Putative ispF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, PFAM = PF00155;PF02542)' T
'16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'nbv0.5scaffold614_77705-89451' '(q9m4w3|ispf_catro : 312.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 296.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 232.0) no description available & (reliability: 592.0) & (original description: Putative ISPF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, PFAM = PF02542)' T
'16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'niben044scf00051098ctg001_3846-16619' '(q9m4w3|ispf_catro : 178.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 170.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 140.0) no description available & (gnl|cdd|35477 : 98.0) no description available & (reliability: 340.0) & (original description: Putative ispF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, PFAM = PF00155;PF02542;PF02542)' T
'16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'niben101scf06180_50124-62378' '(q9m4w3|ispf_catro : 310.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 298.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 231.0) no description available & (reliability: 596.0) & (original description: Putative ISPF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, PFAM = PF02542)' T
'16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'nbv0.5scaffold3301_97717-105878' '(at5g60600 : 1186.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 370.0) no description available & (reliability: 2372.0) & (original description: Putative ispG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), PFAM = PF04551)' T
'16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'nbv0.5scaffold8445_19235-22637' '(at5g60600 : 298.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 196.0) no description available & (reliability: 596.0) & (original description: Putative HDS, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, PFAM = PF04551)' T
'16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben044scf00037540ctg001_1-7721' '(at5g60600 : 1224.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 367.0) no description available & (reliability: 2448.0) & (original description: Putative ISPG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic, PFAM = PF04551)' T
'16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben101scf09264_14959-23115' '(at5g60600 : 1221.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 370.0) no description available & (reliability: 2442.0) & (original description: Putative hds, Description = 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, PFAM = PF04551)' T
'16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben101scf11366_191329-199858' '(at5g60600 : 1223.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 371.0) no description available & (reliability: 2446.0) & (original description: Putative ISPG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic, PFAM = PF04551)' T
'16.1.1.7' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDR' 'niben044scf00008217ctg006_3731-11620' '(at4g34350 : 699.0) Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80817 : 307.0) no description available & (reliability: 1398.0) & (original description: Putative hdr, Description = 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, PFAM = PF02401)' T
'16.1.1.7' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDR' 'niben101scf33689_52192-59225' '(at4g34350 : 724.0) Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80817 : 309.0) no description available & (reliability: 1448.0) & (original description: Putative hdr, Description = 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, PFAM = PF02401)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben044scf00000908ctg001_1468-5188' '(at4g38460 : 388.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (gnl|cdd|35995 : 249.0) no description available & (q43133|ggpps_sinal : 241.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|30491 : 175.0) no description available & (reliability: 776.0) & (original description: Putative GGR, Description = Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben044scf00033364ctg005_3576-6714' '(at4g36810 : 386.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (q42698|ggpps_catro : 384.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (gnl|cdd|35995 : 304.0) no description available & (gnl|cdd|84711 : 212.0) no description available & (reliability: 772.0) & (original description: Putative GGPP4, Description = Geranylgeranyl pyrophosphate synthase 4, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf00929_358852-361949' '(p80042|ggpps_capan : 598.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Capsicum an & (at4g36810 : 451.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 358.0) no description available & (gnl|cdd|84711 : 264.0) no description available & (reliability: 902.0) & (original description: Putative GGPS1, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf02387_392621-395451' '(at4g38460 : 133.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (q94id7|ggpps_hevbr : 117.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (gnl|cdd|35995 : 95.8) no description available & (gnl|cdd|58339 : 94.9) no description available & (reliability: 266.0) & (original description: Putative IDS2, Description = Geranyl diphosphate synthase, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf02772_88842-92152' '(q42698|ggpps_catro : 384.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (at4g36810 : 382.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 306.0) no description available & (gnl|cdd|84711 : 209.0) no description available & (reliability: 764.0) & (original description: Putative crtE, Description = Geranylgeranyl pyrophosphate synthase, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf10468_113804-118884' '(at4g36810 : 395.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (q43133|ggpps_sinal : 395.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|35995 : 336.0) no description available & (gnl|cdd|84711 : 261.0) no description available & (reliability: 790.0) & (original description: Putative GGPS, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf13146_127437-131501' '(at4g38460 : 390.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (gnl|cdd|35995 : 257.0) no description available & (q43133|ggpps_sinal : 247.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|30491 : 183.0) no description available & (reliability: 780.0) & (original description: Putative GGR, Description = Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, PFAM = PF00348)' T
'16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf13710_436297-439385' '(q42698|ggpps_catro : 486.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (at4g36810 : 436.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 354.0) no description available & (gnl|cdd|84711 : 260.0) no description available & (reliability: 872.0) & (original description: Putative GGPS1, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T
'16.1.1.1010' 'secondary metabolism.isoprenoids.mevalonate pathway' 'geranylgeranyl pyrophosphate' '' M
'16.1.1.1011' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'beta-ionone' '' M
'16.1.1.1012' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'beta-damascenone' '' M
'16.1.1.1013' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'pseudoionone' '' M
'16.1.1.1014' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'geranylacetone' '' M
'16.1.2' 'secondary metabolism.isoprenoids.mevalonate pathway' '' ''
'16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1106.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T
'16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1154.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T
'16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'nbv0.5scaffold2914_100754-106085' '(at4g11820 : 691.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 549.0) no description available & (gnl|cdd|80208 : 389.0) no description available & (reliability: 1382.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben044scf00017912ctg006_1342-8286' '(at4g11820 : 752.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 632.0) no description available & (gnl|cdd|80208 : 393.0) no description available & (reliability: 1504.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf01111_94686-101336' '(at4g11820 : 744.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 628.0) no description available & (gnl|cdd|80208 : 388.0) no description available & (reliability: 1488.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf02361_157334-163999' '(at4g11820 : 798.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 390.0) no description available & (reliability: 1596.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf03321_101099-107212' '(at4g11820 : 794.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 393.0) no description available & (reliability: 1588.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T
'16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf10595_110714-116682' '(at4g11820 : 788.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 392.0) no description available & (reliability: 1576.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T
'16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'nbv0.3scaffold74187_4115-8359' '(q01559|hmdh_nicsy : 1145.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase) - Nicotiana sylvestris (Wood tobacco) & (at1g76490 : 815.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 730.0) no description available & (gnl|cdd|64245 : 681.0) no description available & (reliability: 1630.0) & (original description: Putative HMGR, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase, PFAM = PF00368)' T
'16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf00163_174431-180038' '(p29057|hmdh1_hevbr : 840.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) - Hevea brasiliensis (Para rubber tree) & (at1g76490 : 806.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 736.0) no description available & (gnl|cdd|64245 : 676.0) no description available & (reliability: 1612.0) & (original description: Putative HMGR1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T
'16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf02203_562900-567808' '(q01559|hmdh_nicsy : 1120.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase) - Nicotiana sylvestris (Wood tobacco) & (at1g76490 : 811.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 727.0) no description available & (gnl|cdd|64245 : 679.0) no description available & (reliability: 1622.0) & (original description: Putative HMGR, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase, PFAM = PF00368)' T
'16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf09883_235715-240905' '(p29057|hmdh1_hevbr : 829.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) - Hevea brasiliensis (Para rubber tree) & (at1g76490 : 798.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 735.0) no description available & (gnl|cdd|64245 : 677.0) no description available & (reliability: 1596.0) & (original description: Putative HMG1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T
'16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf13180_163376-168563' '(p48020|hmdh1_soltu : 1046.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) (HMGR1) (HMGR) - Solanum tuberosum (Potato) & (at1g76490 : 811.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 729.0) no description available & (gnl|cdd|64245 : 681.0) no description available & (reliability: 1622.0) & (original description: Putative HMG1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T
'16.1.2.4' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate kinase' 'niben044scf00023398ctg003_1-5286' '(at5g27450 : 386.0) Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway.; mevalonate kinase (MK); FUNCTIONS IN: mevalonate kinase activity; INVOLVED IN: isoprenoid biosynthetic process, metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate kinase (InterPro:IPR006205), GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750). & (gnl|cdd|36724 : 347.0) no description available & (gnl|cdd|31765 : 179.0) no description available & (reliability: 772.0) & (original description: Putative MVK, Description = Mevalonate kinase, PFAM = PF08544;PF00288)' T
'16.1.2.4' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate kinase' 'niben101scf00370_380946-387326' '(at5g27450 : 403.0) Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway.; mevalonate kinase (MK); FUNCTIONS IN: mevalonate kinase activity; INVOLVED IN: isoprenoid biosynthetic process, metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate kinase (InterPro:IPR006205), GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750). & (gnl|cdd|36724 : 371.0) no description available & (gnl|cdd|31765 : 179.0) no description available & (reliability: 806.0) & (original description: Putative mvk, Description = Mevalonate kinase, PFAM = PF08544;PF00288)' T
'16.1.2.5' 'secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase' 'niben101scf01202_143548-153105' '(at1g31910 : 233.0) GHMP kinase family protein; FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphomevalonate kinase, eukaryotic (InterPro:IPR005916), Phosphomevalonate kinase, ERG8 (InterPro:IPR016005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721). & (gnl|cdd|39719 : 182.0) no description available & (reliability: 466.0) & (original description: Putative PMK, Description = Phosphomevalonate kinase, PFAM = PF08544)' T
'16.1.2.5' 'secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase' 'niben101scf07030_403925-418187' '(at1g31910 : 574.0) GHMP kinase family protein; FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphomevalonate kinase, eukaryotic (InterPro:IPR005916), Phosphomevalonate kinase, ERG8 (InterPro:IPR016005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721). & (gnl|cdd|39719 : 505.0) no description available & (gnl|cdd|33679 : 125.0) no description available & (reliability: 1148.0) & (original description: Putative PMK, Description = Phosphomevalonate kinase, PFAM = PF00288;PF08544)' T
'16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'nbv0.3scaffold26230_8933-19359' '(at3g54250 : 664.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|38044 : 537.0) no description available & (gnl|cdd|33213 : 264.0) no description available & (reliability: 1328.0) & (original description: Putative MVD2, Description = Diphosphomevalonate decarboxylase MVD2, PFAM = PF00288)' T
'16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'niben044scf00010403ctg002_40949-43282' '(at3g54250 : 160.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative MVAPPD, Description = Putative phosphomevalonate kinase, PFAM = )' T
'16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'niben101scf00173_537297-559933' '(at3g54250 : 673.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|38044 : 540.0) no description available & (gnl|cdd|33213 : 269.0) no description available & (reliability: 1346.0) & (original description: Putative MVD2, Description = Diphosphomevalonate decarboxylase MVD2, PFAM = PF00288)' T
'16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'nbv0.5scaffold667_257273-343815' '(at3g02780 : 347.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink). & (gnl|cdd|35364 : 269.0) no description available & (gnl|cdd|72881 : 185.0) no description available & (reliability: 694.0) & (original description: Putative ipi, Description = Putative isopentenylpyrophosphate isomerase, PFAM = PF00293)' T
'16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf01514_379875-421441' '(at5g16440 : 434.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35364 : 331.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 868.0) & (original description: Putative ipi1, Description = Isopentenyl diphosphate isomerase 1, PFAM = PF00293)' T
'16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf02499_381218-390569' '(at3g02780 : 426.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink). & (gnl|cdd|35364 : 328.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 852.0) & (original description: Putative ipi1, Description = Isopentenyl diphosphate isomerase 1, PFAM = PF00293)' T
'16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf05848_574706-586332' '(at5g16440 : 427.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35364 : 325.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 854.0) & (original description: Putative IPI1, Description = Isopentenyl-diphosphate Delta-isomerase I, PFAM = PF00293)' T
'16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'nbv0.3scaffold2137_5565-18049' '(at2g34630 : 438.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 284.0) no description available & (gnl|cdd|30491 : 207.0) no description available & (q94id7|ggpps_hevbr : 91.3) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 876.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T
'16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf00885_1964438-1977068' '(at2g34630 : 544.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 295.0) no description available & (gnl|cdd|30491 : 231.0) no description available & (q94id7|ggpps_hevbr : 90.9) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 1088.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T
'16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf04741_597121-603609' '(at1g78510 : 521.0) Encodes a protein with solanesyl diphosphate synthase activity.; solanesyl diphosphate synthase 1 (SPS1); CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 16694 Blast hits to 16671 proteins in 2946 species: Archae - 341; Bacteria - 9481; Metazoa - 459; Fungi - 560; Plants - 421; Viruses - 0; Other Eukaryotes - 5432 (source: NCBI BLink). & (gnl|cdd|35995 : 323.0) no description available & (gnl|cdd|30491 : 261.0) no description available & (q43133|ggpps_sinal : 133.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (reliability: 1026.0) & (original description: Putative SPS1, Description = Solanesyl diphosphate synthase 1, PFAM = PF00348)' T
'16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf17922_166620-180182' '(at2g34630 : 535.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 294.0) no description available & (gnl|cdd|30491 : 230.0) no description available & (q94id7|ggpps_hevbr : 90.5) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 1070.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T
'16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben044scf00011481ctg019_538-5775' '(o64905|fpps_helan : 518.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 507.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 388.0) no description available & (gnl|cdd|84711 : 250.0) no description available & (reliability: 1014.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase1, PFAM = PF00348)' T
'16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben044scf00029252ctg008_2089-8096' '(at5g47770 : 563.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64905|fpps_helan : 563.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (gnl|cdd|35930 : 422.0) no description available & (gnl|cdd|84711 : 256.0) no description available & (reliability: 1126.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase, PFAM = PF00348)' T
'16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben101scf04444_920163-928360' '(o64905|fpps_helan : 577.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 566.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 421.0) no description available & (gnl|cdd|84711 : 257.0) no description available & (reliability: 1132.0) & (original description: Putative fps, Description = Farnesyl diphosphate synthase, PFAM = PF00348)' T
'16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben101scf04739_159558-165435' '(o64905|fpps_helan : 566.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 565.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 424.0) no description available & (gnl|cdd|84711 : 255.0) no description available & (reliability: 1130.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase, PFAM = PF00348)' T
'16.1.2.1001' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate' '' M
'16.1.2.1002' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate-5-phosphate' '' M
'16.1.2.1003' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate-5-pyrophosphate' '' M
'16.1.2.1004' 'secondary metabolism.isoprenoids.mevalonate pathway' 'isopentenyl-pyrophoshate' '' M
'16.1.2.1005' 'secondary metabolism.isoprenoids.mevalonate pathway' 'dimethylallyl-pyrophosphate' '' M
'16.1.2.1006' 'secondary metabolism.isoprenoids.mevalonate pathway' 'geranyl pyrophosphate' '' M
'16.1.2.1007' 'secondary metabolism.isoprenoids.mevalonate pathway' 'neryl pyrophosphate' '' M
'16.1.2.1008' 'secondary metabolism.isoprenoids.mevalonate pathway' 'farnesyl pyrophosphate' '' M
'16.1.2.1009' 'secondary metabolism.isoprenoids.mevalonate pathway' 'sesquiterpene' '' M
'16.1.2.1010' 'secondary metabolism.isoprenoids.mevalonate pathway' 'squalene' '' M
'16.1.2.1011' 'secondary metabolism.isoprenoids.mevalonate pathway' 'linaloyl pyrophosphate' '' M
'16.1.2.1012' 'secondary metabolism.isoprenoids.mevalonate pathway' 'alpha-pinene' '' M
'16.1.2.1013' 'secondary metabolism.isoprenoids.mevalonate pathway' 'limonene' '' M
'16.1.2.1014' 'secondary metabolism.isoprenoids.mevalonate pathway' 'beta-pinene' '' M
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 956.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 684.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben044scf00013451ctg006_330-2784' '(gnl|cdd|35480 : 149.0) no description available & (at5g36160 : 138.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben044scf00039677ctg008_765-4428' '(q2n2k1|phyk1_soybn : 330.0) Probable phytol kinase 1, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (at5g04490 : 304.0) Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis.; vitamin E pathway gene 5 (VTE5); FUNCTIONS IN: phytol kinase activity, phosphatidate cytidylyltransferase activity; INVOLVED IN: vitamin E biosynthetic process, phospholipid biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: Phosphatidate cytidylyltransferase family protein (TAIR:AT5G58560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39654 : 176.0) no description available & (reliability: 608.0) & (original description: Putative cdsA, Description = Phytol kinase, PFAM = )' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf00484_329571-343097' '(at3g11945 : 486.0) Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.; homogentisate prenyltransferase (HST); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate phytyltransferase 1 (TAIR:AT2G18950.1); Has 1367 Blast hits to 1364 proteins in 371 species: Archae - 252; Bacteria - 598; Metazoa - 1; Fungi - 4; Plants - 199; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|84373 : 213.0) no description available & (reliability: 972.0) & (original description: Putative HST, Description = Homogentisate solanesyltransferase, chloroplastic, PFAM = PF01040)' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 1026.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1104.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.1.3.1' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase' 'niben101scf00095_235350-244309' '(o23920|hppd_dauca : 606.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 568.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|35857 : 396.0) no description available & (gnl|cdd|32998 : 185.0) no description available & (reliability: 1136.0) & (original description: Putative hppD, Description = 4-hydroxyphenylpyruvate dioxygenase, PFAM = PF00903)' T
'16.1.3.1' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase' 'niben101scf26094_4334-14330' '(o23920|hppd_dauca : 591.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 565.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|35857 : 395.0) no description available & (gnl|cdd|32998 : 179.0) no description available & (reliability: 1130.0) & (original description: Putative hppd, Description = 4-hydroxyphenylpyruvate dioxygenase, PFAM = PF00903)' T
'16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'nbv0.3scaffold31519_1594-22674' '(at2g18950 : 469.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 254.0) no description available & (reliability: 938.0) & (original description: Putative hpt, Description = Homogentisate phytyl transferase, PFAM = PF01040)' T
'16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'nbv0.5scaffold512_636660-640426' '(at2g18950 : 152.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 108.0) no description available & (reliability: 304.0) & (original description: Putative hggt, Description = Homogentisate phytyltransferase, PFAM = PF01040)' T
'16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'niben101scf03979_492820-516437' '(at2g18950 : 471.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 254.0) no description available & (reliability: 942.0) & (original description: Putative hpt, Description = Homogentisate phytyl transferase, PFAM = PF01040)' T
'16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'niben101scf07926_572194-582360' '(at2g18950 : 343.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 218.0) no description available & (reliability: 686.0) & (original description: Putative hggt, Description = Homogentisate geranylgeranyl transferase, PFAM = PF01040)' T
'16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'nbv0.3scaffold54015_7197-12868' '(p23525|in37_spiol : 499.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 471.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 231.0) no description available & (gnl|cdd|32408 : 98.8) no description available & (reliability: 942.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF08241)' T
'16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf03573_127532-132712' '(p23525|in37_spiol : 503.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 485.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 233.0) no description available & (gnl|cdd|32408 : 93.4) no description available & (reliability: 970.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF13649)' T
'16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf10450_8060-13672' '(p23525|in37_spiol : 497.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 488.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 233.0) no description available & (gnl|cdd|32408 : 95.0) no description available & (reliability: 976.0) & (original description: Putative VTE3, Description = 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, PFAM = PF13649)' T
'16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf16915_56395-60820' '(p23525|in37_spiol : 502.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 473.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 232.0) no description available & (gnl|cdd|32408 : 99.6) no description available & (reliability: 946.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF08241)' T
'16.1.3.4' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol cyclase' 'niben101scf10086_204631-213320' '(at4g32770 : 653.0) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.; VITAMIN E DEFICIENT 1 (VTE1); FUNCTIONS IN: tocopherol cyclase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, plastoglobule, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q94fy8|tocc_maize : 627.0) Probable tocopherol cyclase, chloroplast precursor (Sucrose export defective 1) - Zea mays (Maize) & (reliability: 1306.0) & (original description: Putative tc, Description = Tocopherol cyclase, PFAM = PF14249)' T
'16.1.3.5' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase' 'niben044scf00045482ctg005_138-2608' '(at1g64970 : 100.0) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves; gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TMT, Description = Gamma-tocopherol methyltransferase, PFAM = )' T
'16.1.3.5' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase' 'niben101scf02821_430439-437122' '(at1g64970 : 410.0) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves; gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink). & (gnl|cdd|36483 : 183.0) no description available & (gnl|cdd|87468 : 96.9) no description available & (reliability: 820.0) & (original description: Putative VTE4, Description = Tocopherol O-methyltransferase, chloroplastic, PFAM = PF08241)' T
'16.1.3.1001' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'delta-tocopherol' 'secondary metabolism, tocopherols' M
'16.1.3.1002' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'tocopherol acetate' 'secondary metabolism, tocopherols' M
'16.1.3.1003' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'alpha-tocopherol' 'secondary metabolism, tocopherols' M
'16.1.3.1004' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'beta-tocopherol' 'secondary metabolism, tocopherols' M
'16.1.3.1005' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'gamma-tocopherol' 'secondary metabolism, tocopherols' M
'16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'nbv0.3scaffold158507_1-911' '(at5g49555 : 219.0) FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39455 : 174.0) no description available & (gnl|cdd|31426 : 101.0) no description available & (reliability: 438.0) & (original description: Putative crtI, Description = FAD-dependent oxidoreductase, PFAM = PF13450)' T
'16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'nbv0.5scaffold2210_15040-18494' '(at3g09580 : 470.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (gnl|cdd|85554 : 126.0) no description available & (reliability: 940.0) & (original description: Putative puo, Description = Amine oxidase, PFAM = PF01593)' T
'16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf05969_136781-151573' '(at5g49555 : 902.0) FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39455 : 653.0) no description available & (gnl|cdd|31426 : 297.0) no description available & (reliability: 1804.0) & (original description: Putative crtI, Description = FAD-dependent oxidoreductase, PFAM = PF01593)' T
'16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf07508_873620-882058' '(at1g57770 : 870.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|39455 : 535.0) no description available & (gnl|cdd|31426 : 224.0) no description available & (q2vex9|crtso_dauca : 184.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 1740.0) & (original description: Putative crtH, Description = Carotenoid isomerase, PFAM = PF01593)' T
'16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf11560_17657-21111' '(at3g09580 : 486.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (gnl|cdd|85554 : 140.0) no description available & (reliability: 972.0) & (original description: Putative puo, Description = Putrescine oxidase, PFAM = PF01593)' T
'16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf04020_35096-40455' '(p37272|psy_capan : 729.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 586.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|36672 : 343.0) no description available & (gnl|cdd|64362 : 334.0) no description available & (reliability: 1172.0) & (original description: Putative PSY1, Description = Bifunctional 15-cis-phytoene synthase, chromoplastic, PFAM = PF00494)' T
'16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf07253_120609-125329' '(p37272|psy_capan : 673.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 560.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|36672 : 344.0) no description available & (gnl|cdd|64362 : 332.0) no description available & (reliability: 1120.0) & (original description: Putative psy2, Description = Phytoene synthase 2, PFAM = PF00494)' T
'16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf08679_530138-538112' '(p37272|psy_capan : 451.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 442.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|64362 : 291.0) no description available & (gnl|cdd|36672 : 250.0) no description available & (reliability: 884.0) & (original description: Putative psy, Description = Phytoene synthase, PFAM = PF00494)' T
'16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'nbv0.5scaffold3010_147014-149994' '(p80093|crti_capan : 271.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 251.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 121.0) no description available & (gnl|cdd|35252 : 108.0) no description available & (reliability: 502.0) & (original description: Putative PDS, Description = Phytoene desaturase, PFAM = PF01593)' T
'16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'niben101scf01283_197006-206021' '(p80093|crti_capan : 1134.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 952.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 412.0) no description available & (gnl|cdd|35252 : 304.0) no description available & (reliability: 1904.0) & (original description: Putative PDS, Description = 15-cis-phytoene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T
'16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'niben101scf14708_12814-22332' '(p80093|crti_capan : 1137.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 942.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 414.0) no description available & (gnl|cdd|35252 : 308.0) no description available & (reliability: 1884.0) & (original description: Putative PDS, Description = 15-cis-phytoene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T
'16.1.4.3' 'secondary metabolism.isoprenoids.carotenoids.zeta-carotene desaturase' 'niben101scf02804_31923-39899' '(q9smj3|zds_capan : 1161.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Capsicum annuum (Bell pepper) & (at3g04870 : 950.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 412.0) no description available & (gnl|cdd|35252 : 268.0) no description available & (reliability: 1900.0) & (original description: Putative ZDS, Description = Zeta-carotene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T
'16.1.4.4' 'secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase' 'niben101scf18343_154630-161326' '(at5g57030 : 802.0) Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase; LUTEIN DEFICIENT 2 (LUT2); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: lycopene cyclase (TAIR:AT3G10230.1); Has 1086 Blast hits to 1081 proteins in 157 species: Archae - 2; Bacteria - 176; Metazoa - 0; Fungi - 0; Plants - 363; Viruses - 0; Other Eukaryotes - 545 (source: NCBI BLink). & (gnl|cdd|69364 : 464.0) no description available & (q43578|lcyb_tobac : 294.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Nicotiana tabacum (Common tobacco) & (reliability: 1604.0) & (original description: Putative bLCY, Description = Lycopene epsilon-cyclase, PFAM = PF05834)' T
'16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'nbv0.3scaffold12136_33637-37124' '(q42435|ccs_capan : 860.0) Capsanthin/capsorubin synthase, chloroplast precursor (EC 5.3.99.8) - Capsicum annuum (Bell pepper) & (at3g10230 : 525.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 412.0) no description available & (reliability: 1050.0) & (original description: Putative NXS, Description = Neoxanthin synthase, chloroplastic, PFAM = PF05834)' T
'16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'niben101scf00980_786184-789733' '(q43578|lcyb_tobac : 979.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Nicotiana tabacum (Common tobacco) & (at3g10230 : 774.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 420.0) no description available & (reliability: 1548.0) & (original description: Putative LCY1, Description = Lycopene beta cyclase, chloroplastic, PFAM = PF05834)' T
'16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'niben101scf01750_1471112-1474150' '(q42435|ccs_capan : 849.0) Capsanthin/capsorubin synthase, chloroplast precursor (EC 5.3.99.8) - Capsicum annuum (Bell pepper) & (at3g10230 : 534.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 419.0) no description available & (reliability: 1068.0) & (original description: Putative NXS, Description = Neoxanthin synthase, chloroplastic, PFAM = PF05834)' T
'16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf01232_385600-389646' '(at5g52570 : 376.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative CA2, Description = Beta-carotene hydroxylase 2, chloroplastic, PFAM = PF04116)' T
'16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf01232_385636-388156' '(at5g52570 : 125.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bCHY, Description = Beta-carotene hydroxylase, PFAM = )' T
'16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf03114_482781-661128' '(at5g52570 : 355.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative CA2, Description = Beta-carotene hydroxylase 2, chloroplastic, PFAM = PF04116)' T
'16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben044scf00052751ctg000_1149-14490' '(at1g31800 : 909.0) Encodes a protein with β-ring carotenoid hydroxylase activity.; "cytochrome P450, family 97, subfamily A, polypeptide 3" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (o48921|c97b2_soybn : 439.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 309.0) no description available & (gnl|cdd|84486 : 263.0) no description available & (reliability: 1818.0) & (original description: Putative cpr, Description = Cytochrome P450, PFAM = PF00067)' T
'16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben101scf00177_1119698-1135082' '(at1g31800 : 875.0) Encodes a protein with β-ring carotenoid hydroxylase activity.; "cytochrome P450, family 97, subfamily A, polypeptide 3" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (o48921|c97b2_soybn : 433.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 302.0) no description available & (gnl|cdd|84486 : 255.0) no description available & (reliability: 1750.0) & (original description: Putative cpr, Description = Cytochrome P450, PFAM = PF00067)' T
'16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben101scf02502_1147154-1158611' '(at3g53130 : 862.0) Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3.; LUTEIN DEFICIENT 1 (LUT1); FUNCTIONS IN: epsilon hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31038 Blast hits to 30928 proteins in 1581 species: Archae - 62; Bacteria - 3557; Metazoa - 11361; Fungi - 6359; Plants - 8451; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (o48921|c97b2_soybn : 440.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 299.0) no description available & (gnl|cdd|84486 : 257.0) no description available & (reliability: 1724.0) & (original description: Putative lut1, Description = Carotene epsilon-monooxygenase, PFAM = PF00067)' T
'16.1.4.8' 'secondary metabolism.isoprenoids.carotenoids.carotenoid isomerase' 'niben101scf12589_41826-50171' '(at1g06820 : 907.0) Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene.; carotenoid isomerase (CRTISO); CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Carotene isomerase (InterPro:IPR014101); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G57770.1); Has 6522 Blast hits to 6439 proteins in 939 species: Archae - 207; Bacteria - 2788; Metazoa - 150; Fungi - 77; Plants - 203; Viruses - 0; Other Eukaryotes - 3097 (source: NCBI BLink). & (q2vex9|crtso_dauca : 907.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (gnl|cdd|39455 : 529.0) no description available & (gnl|cdd|31426 : 274.0) no description available & (reliability: 1814.0) & (original description: Putative CRTISO, Description = Prolycopene isomerase, chloroplastic, PFAM = PF01593)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'nbv0.5scaffold906_177691-184593' '(gnl|cdd|33468 : 133.0) no description available & (at3g63520 : 112.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 83.1) no description available & (reliability: 224.0) & (original description: Putative Sb02g021480, Description = Putative uncharacterized protein Sb02g021480, PFAM = PF03055;PF03055)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben044scf00023796ctg004_6148-10593' '(gnl|cdd|33468 : 208.0) no description available & (at3g63520 : 144.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 90.8) no description available & (reliability: 288.0) & (original description: Putative Sb02g021490, Description = Putative uncharacterized protein Sb02g021490, PFAM = PF03055;PF03055)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf09445_397019-402297' '(gnl|cdd|86222 : 284.0) no description available & (at3g63520 : 194.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 126.0) no description available & (reliability: 388.0) & (original description: Putative Os09g0321200, Description = Os09g0321200 protein, PFAM = PF03055)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_40989-58885' '(at3g63520 : 840.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 542.0) no description available & (gnl|cdd|36499 : 397.0) no description available & (reliability: 1680.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_42832-58966' '(at3g63520 : 831.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 533.0) no description available & (gnl|cdd|36499 : 384.0) no description available & (reliability: 1662.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T
'16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_58886-73628' '(at3g63520 : 885.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 574.0) no description available & (gnl|cdd|36499 : 413.0) no description available & (reliability: 1770.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'nbv0.3scaffold5614_1528-6367' '(at1g08550 : 549.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 386.0) no description available & (reliability: 1098.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'nbv0.5scaffold46_756597-762181' '(at1g08550 : 464.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 325.0) no description available & (reliability: 928.0) & (original description: Putative vde, Description = Violaxanthin de-epoxidase, PFAM = PF07137)' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben044scf00013338ctg009_1607-7364' '(at1g08550 : 547.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 375.0) no description available & (reliability: 1094.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf00177_735955-741666' '(at1g08550 : 398.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 183.0) no description available & (reliability: 796.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf01006_517300-523453' '(at2g21860 : 667.0) violaxanthin de-epoxidase-related; BEST Arabidopsis thaliana protein match is: non-photochemical quenching 1 (TAIR:AT1G08550.2); Has 151 Blast hits to 151 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 1334.0) & (original description: Putative At2g21860, Description = At2g21860/F7D8.18, PFAM = )' T
'16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf07893_170216-174376' '(at1g08550 : 578.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 414.0) no description available & (reliability: 1156.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T
'16.1.4.1001' 'secondary metabolism.isoprenoids.carotenoids.phytoene' 'phytoene' 'Carotene precursor' M
'16.1.4.1002' 'secondary metabolism.isoprenoids.carotenoids.zeta carotene' 'zeta carotene' '' M
'16.1.4.1003' 'secondary metabolism.isoprenoids.carotenoids.lycopene' 'lycopene' '' M
'16.1.4.1004' 'secondary metabolism.isoprenoids.carotenoids.alpha carotene' 'alpha carotene' '' M
'16.1.4.1005' 'secondary metabolism.isoprenoids.carotenoids.beta carotene' 'alpha carotene' '' M
'16.1.4.1006' 'secondary metabolism.isoprenoids.carotenoids.delta carotene' 'delta carotene' '' M
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold16576_14732-23813' '(gnl|cdd|35718 : 1128.0) no description available & (at1g78950 : 1012.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 647.0) no description available & (reliability: 2024.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 2000.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold47462_1081-11385' '(gnl|cdd|35718 : 1291.0) no description available & (at1g78950 : 1234.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 862.0) no description available & (reliability: 2468.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold54148_9154-13728' '(gnl|cdd|29478 : 238.0) no description available & (p93665|dcs1_goshi : 189.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at1g70080 : 146.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold67271_8078-9966' '(q40577|5eas_tobac : 266.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 185.0) no description available & (at1g70080 : 102.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold81729_2321-6577' '(gnl|cdd|29478 : 569.0) no description available & (q40577|5eas_tobac : 532.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 373.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 746.0) & (original description: Putative TPS3, Description = Probable terpene synthase 3, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold93197_1880-4658' '(q40577|5eas_tobac : 356.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 213.0) no description available & (at3g29410 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold96346_1-4124' '(q40577|5eas_tobac : 1000.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 653.0) no description available & (at5g23960 : 400.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 800.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold1128_198933-203899' '(gnl|cdd|29478 : 398.0) no description available & (at3g25830 : 265.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q40577|5eas_tobac : 191.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (reliability: 530.0) & (original description: Putative tps1, Description = Limonene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold2120_38860-41810' '(q40577|5eas_tobac : 452.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 292.0) no description available & (at5g23960 : 184.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 368.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold5532_125716-140579' '(gnl|cdd|29478 : 590.0) no description available & (at3g25830 : 470.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 338.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 940.0) & (original description: Putative TPS3, Description = (-)-camphene/tricyclene synthase, chloroplastic, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold7914_9097-14027' '(gnl|cdd|29478 : 335.0) no description available & (at1g61680 : 304.0) terpene synthase 14 (TPS14); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 02 (TAIR:AT4G16730.1). & (p93665|dcs1_goshi : 191.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 608.0) & (original description: Putative TPS2, Description = Plastid terpene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold8917_103-3009' '(q40577|5eas_tobac : 258.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 176.0) no description available & (at1g70080 : 95.1) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00002759ctg015_1568-6217' '(q40577|5eas_tobac : 975.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 632.0) no description available & (at5g23960 : 393.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 786.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00004447ctg002_7043-11323' '(q40577|5eas_tobac : 983.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 647.0) no description available & (at5g23960 : 398.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 796.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00004447ctg007_3991-8389' '(q40577|5eas_tobac : 689.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 458.0) no description available & (at5g23960 : 287.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 574.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00008452ctg041_304-2753' '(q40577|5eas_tobac : 211.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 127.0) no description available & (at3g29410 : 83.2) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative tps1, Description = 5-epi-aristolochene synthase, PFAM = PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00008452ctg041_502-3385' '(q40577|5eas_tobac : 531.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 376.0) no description available & (at5g23960 : 243.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 486.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00021306ctg002_1-5947' '(gnl|cdd|29478 : 614.0) no description available & (at3g25830 : 489.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q40577|5eas_tobac : 342.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (reliability: 978.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00023720ctg009_17629-27746' '(gnl|cdd|35718 : 1254.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 831.0) no description available & (reliability: 2390.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00041813ctg004_1-6218' '(gnl|cdd|35718 : 995.0) no description available & (at1g78950 : 919.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 742.0) no description available & (reliability: 1838.0) & (original description: Putative bAS, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00050019ctg003_1-3311' '(gnl|cdd|29478 : 256.0) no description available & (at3g25810 : 246.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p59287|cass_ricco : 112.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (reliability: 492.0) & (original description: Putative tps1, Description = Monoterpene synthase, PFAM = PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00055581ctg000_5015-9471' '(q40577|5eas_tobac : 375.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 233.0) no description available & (at3g14520 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative HRR8, Description = Putative 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2086.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00176_169092-177361' '(gnl|cdd|29478 : 618.0) no description available & (at4g16740 : 498.0) Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity.; terpene synthase 03 (TPS03); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93665|dcs1_goshi : 343.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 996.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00176_380625-389262' '(gnl|cdd|29478 : 471.0) no description available & (at2g24210 : 335.0) terpene synthase 10 (TPS10); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1742 Blast hits to 1707 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1738; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p59287|cass_ricco : 257.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (reliability: 670.0) & (original description: Putative TPS7, Description = Alpha-farnesene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00397_856414-885647' '(gnl|cdd|29478 : 592.0) no description available & (at3g25810 : 485.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93665|dcs1_goshi : 335.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 970.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF03936;PF01397;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00712_190713-195062' '(q40577|5eas_tobac : 712.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 468.0) no description available & (at5g23960 : 296.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 592.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00739_497104-548028' '(gnl|cdd|35718 : 1290.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 855.0) no description available & (reliability: 2390.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf01660_285254-289336' '(gnl|cdd|29478 : 199.0) no description available & (p93665|dcs1_goshi : 165.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at3g14520 : 117.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative tps1, Description = Terpene synthase, PFAM = PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf01683_290111-294596' '(q40577|5eas_tobac : 1003.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 641.0) no description available & (at5g23960 : 391.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 782.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02294_378084-383050' '(gnl|cdd|29478 : 585.0) no description available & (at3g25830 : 516.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 302.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 1032.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02340_739208-751020' '(at1g61120 : 637.0) Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.; terpene synthase 04 (TPS04); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1879 Blast hits to 1869 proteins in 199 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 7; Plants - 1856; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q39548|ksb_cucma : 288.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|29478 : 279.0) no description available & (reliability: 1274.0) & (original description: Putative GES, Description = (E,E)-geranyllinalool synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1182.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf03993_543845-548237' '(q40577|5eas_tobac : 980.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 645.0) no description available & (at5g23960 : 397.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 794.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf04741_597121-603609' '(at1g78510 : 521.0) Encodes a protein with solanesyl diphosphate synthase activity.; solanesyl diphosphate synthase 1 (SPS1); CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 16694 Blast hits to 16671 proteins in 2946 species: Archae - 341; Bacteria - 9481; Metazoa - 459; Fungi - 560; Plants - 421; Viruses - 0; Other Eukaryotes - 5432 (source: NCBI BLink). & (gnl|cdd|35995 : 323.0) no description available & (gnl|cdd|30491 : 261.0) no description available & (q43133|ggpps_sinal : 133.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (reliability: 1042.0) & (original description: Putative SPS1, Description = Solanesyl diphosphate synthase 1, PFAM = PF00348)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf07775_104060-112548' '(gnl|cdd|29478 : 597.0) no description available & (at3g25830 : 489.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 308.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 978.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 308.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf08294_355244-376674' '(gnl|cdd|29478 : 612.0) no description available & (at3g25810 : 484.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93665|dcs1_goshi : 353.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 968.0) & (original description: Putative tps1, Description = Limonene synthase, PFAM = PF01397;PF03936)' T
'16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf16511_86672-90928' '(gnl|cdd|29478 : 596.0) no description available & (q40577|5eas_tobac : 558.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 388.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 776.0) & (original description: Putative TPS32, Description = Viridiflorene synthase, PFAM = PF03936;PF01397)' T
'16.1.5.1001' 'secondary metabolism.isoprenoids.terpenoids' 'squalen' 'secondary metabolism, steroids, terpenoids' M
'16.1.5.1002' 'secondary metabolism.isoprenoids.terpenoids' 'beta-sitosterol' 'secondary metabolism, Phytosterol, HEALTH: reduces blood cholesterol, ameliorates prostate problems' M
'16.1.5.1003' 'secondary metabolism.isoprenoids.terpenoids' 'campesterol' 'secondary metabolism, Phytosterol (brassinosteroids synthesis)' M
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold18174_18178-21578' '(o22309|7omt9_medsa : 326.0) Isoflavone-7-O-methyltransferase 9 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 9) (7 IOMT-9) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 279.0) no description available & (gnl|cdd|38388 : 225.0) no description available & (at4g35160 : 215.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold23312_1-5005' '(gnl|cdd|82355 : 330.0) no description available & (gnl|cdd|35478 : 306.0) no description available & (at1g77670 : 298.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative dapC, Description = Aminotransferase, PFAM = PF00155)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold392_247425-259851' '(o22308|7omt6_medsa : 271.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 259.0) no description available & (gnl|cdd|38388 : 207.0) no description available & (at4g35160 : 193.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative oomtA, Description = Isoflavone-7-O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold621_429796-435443' '(gnl|cdd|82355 : 317.0) no description available & (gnl|cdd|35478 : 286.0) no description available & (at1g77670 : 284.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative dapC, Description = Aminotransferase, PFAM = PF00155)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold626_178989-183432' '(at4g35160 : 313.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|85101 : 225.0) no description available & (gnl|cdd|38388 : 220.0) no description available & (p28002|comt1_medsa : 187.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (reliability: 626.0) & (original description: Putative 6OMT, Description = (RS)-norcoclaurine 6-O-methyltransferase, PFAM = PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold896_196235-200858' '(at1g32910 : 424.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 232.0) no description available & (o23917|hcbt2_diaca : 88.2) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 848.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold2089_157603-160634' '(at1g32910 : 359.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 199.0) no description available & (reliability: 718.0) & (original description: Putative CFAT, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold2823_83291-88071' '(at2g22570 : 326.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 99.3) no description available & (reliability: 652.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00004692ctg012_1-3335' '(o22308|7omt6_medsa : 265.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 257.0) no description available & (gnl|cdd|38388 : 200.0) no description available & (at4g35160 : 193.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative oomtA, Description = Isoflavone-7-O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00012181ctg007_10139-13034' '(at3g26040 : 110.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 88.5) no description available & (reliability: 212.0) & (original description: Putative PGSC0003DMG400024242, Description = , PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00014992ctg021_1492-3452' '(o24529|7omt8_medsa : 110.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 87.6) no description available & (at4g35160 : 82.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative COMT, Description = Isoflavone-7-O-methyltransferase 9, PFAM = PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00015669ctg021_1-3769' '(at1g32910 : 430.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 233.0) no description available & (o23918|hcbt3_diaca : 89.7) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 860.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00017878ctg002_1-2483' '(at2g23910 : 133.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 110.0) no description available & (reliability: 266.0) & (original description: Putative At2g23910, Description = Cinnamoyl-CoA reductase-related family protein, PFAM = )' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00051935ctg000_849-5406' '(at1g62940 : 763.0) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.; acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). & (gnl|cdd|36391 : 472.0) no description available & (gnl|cdd|30666 : 397.0) no description available & (p14912|4cl1_petcr : 387.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1526.0) & (original description: Putative 4CLL1, Description = 4-coumarate--CoA ligase-like 1, PFAM = PF13193;PF00501)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00116_657661-663850' '(at1g32910 : 476.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 282.0) no description available & (o24645|hcbt1_diaca : 99.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 952.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00150_309714-313705' '(at1g28680 : 529.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07080.1); Has 2577 Blast hits to 2568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 2509; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 240.0) no description available & (o24645|hcbt1_diaca : 121.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1058.0) & (original description: Putative At1g28680, Description = Anthranilate N-hydroxycinnamoyl/benzoyltransferase, putative, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00163_36738-43292' '(at2g33590 : 338.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink). & (gnl|cdd|36715 : 336.0) no description available & (p51110|dfra_vitvi : 188.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 142.0) no description available & (reliability: 676.0) & (original description: Putative ccr2, Description = Cinnamoyl-CoA reductase 2, PFAM = PF01370)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00261_179995-182369' '(at1g32100 : 173.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|86857 : 109.0) no description available & (p52578|ifrh_soltu : 95.5) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 346.0) & (original description: Putative PLR1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00348_1055793-1059187' '(at5g01210 : 600.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 304.0) no description available & (o24645|hcbt1_diaca : 104.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1200.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01063_206550-210035' '(at2g23910 : 246.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 202.0) no description available & (p51110|dfra_vitvi : 102.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 492.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01370)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01182_799061-802461' '(o22309|7omt9_medsa : 319.0) Isoflavone-7-O-methyltransferase 9 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 9) (7 IOMT-9) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 278.0) no description available & (gnl|cdd|38388 : 224.0) no description available & (at4g35160 : 208.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01230_450482-457015' '(at5g23230 : 276.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 148.0) no description available & (reliability: 552.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01418_67513-72791' '(at1g32100 : 459.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 273.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 253.0) no description available & (reliability: 918.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01418_181246-184561' '(at1g32100 : 391.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 258.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 250.0) no description available & (reliability: 782.0) & (original description: Putative EGS1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01432_482250-486574' '(at5g67150 : 361.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 231.0) no description available & (o24645|hcbt1_diaca : 86.3) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 722.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01773_370984-374699' '(at1g68540 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G25460.1). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 198.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 130.0) no description available & (reliability: 884.0) & (original description: Putative TKPR2, Description = Tetraketide alpha-pyrone reductase 2, PFAM = PF01370)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01917_1244145-1247285' '(at5g23230 : 278.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 150.0) no description available & (reliability: 556.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01917_1244169-1247264' '(at5g23230 : 267.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 148.0) no description available & (reliability: 534.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02294_420449-424273' '(at2g22570 : 308.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 92.7) no description available & (reliability: 616.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02385_80089-86549' '(at2g23910 : 234.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 227.0) no description available & (p51110|dfra_vitvi : 107.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 468.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02429_245538-253848' '(at1g77670 : 703.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (gnl|cdd|82355 : 470.0) no description available & (gnl|cdd|35478 : 409.0) no description available & (reliability: 1406.0) & (original description: Putative ybdL, Description = Class I/II aminotransferase, PFAM = PF00155)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02688_80703-90855' '(gnl|cdd|81764 : 314.0) no description available & (gnl|cdd|36391 : 183.0) no description available & (at1g20480 : 84.3) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative glysoja_005367, Description = Long-chain-fatty-acid--AMP ligase FadD28, PFAM = PF00501;PF13450;PF14602;PF00550;PF00132)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02908_651860-656053' '(at4g35160 : 322.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|38388 : 256.0) no description available & (gnl|cdd|85101 : 227.0) no description available & (o24529|7omt8_medsa : 175.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (reliability: 644.0) & (original description: Putative 4'OMT2, Description = 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase 2, PFAM = PF00891;PF08100)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03021_10670-17555' '(at2g02400 : 491.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58490.1); Has 17462 Blast hits to 17447 proteins in 2524 species: Archae - 423; Bacteria - 8786; Metazoa - 654; Fungi - 1071; Plants - 2738; Viruses - 70; Other Eukaryotes - 3720 (source: NCBI BLink). & (gnl|cdd|36715 : 338.0) no description available & (p51110|dfra_vitvi : 174.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 121.0) no description available & (reliability: 982.0) & (original description: Putative CCR8, Description = Cinnamoyl-CoA reductase 8, PFAM = PF01370)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03085_755684-759388' '(o24529|7omt8_medsa : 337.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 273.0) no description available & (gnl|cdd|38388 : 212.0) no description available & (at4g35160 : 204.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03241_26220-29983' '(at2g22570 : 324.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 100.0) no description available & (reliability: 648.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf04362_358605-363441' '(gnl|cdd|36391 : 474.0) no description available & (at1g20500 : 450.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G38120.1); Has 82776 Blast hits to 75503 proteins in 3739 species: Archae - 1179; Bacteria - 53477; Metazoa - 3434; Fungi - 4583; Plants - 2754; Viruses - 1; Other Eukaryotes - 17348 (source: NCBI BLink). & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 344.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative 4CLL4, Description = 4-coumarate--CoA ligase-like 4, PFAM = PF13193;PF00501)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf04574_237583-242363' '(at2g22570 : 326.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 99.3) no description available & (reliability: 652.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf05308_21386-25721' '(at1g62940 : 763.0) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.; acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). & (gnl|cdd|36391 : 477.0) no description available & (gnl|cdd|30666 : 399.0) no description available & (p14912|4cl1_petcr : 396.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1526.0) & (original description: Putative 4CLL1, Description = 4-coumarate--CoA ligase-like 1, PFAM = PF13193;PF00501)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf06984_237892-241190' '(at2g40230 : 525.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G27620.1); Has 2517 Blast hits to 2503 proteins in 143 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 52; Plants - 2458; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66174 : 217.0) no description available & (o24645|hcbt1_diaca : 127.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1050.0) & (original description: Putative AT9, Description = Alcohol acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf07493_416126-419484' '(at5g42830 : 500.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 241.0) no description available & (o24645|hcbt1_diaca : 97.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1000.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf08045_290218-293251' '(at2g19070 : 505.0) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091); spermidine hydroxycinnamoyl transferase (SHT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (TAIR:AT5G48930.1); Has 2876 Blast hits to 2852 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 114; Plants - 2754; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66174 : 341.0) no description available & (o24645|hcbt1_diaca : 257.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1010.0) & (original description: Putative SHT, Description = Spermidine hydroxycinnamoyl transferase, PFAM = PF02458)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf09068_152112-157468' '(at4g35160 : 373.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|38388 : 247.0) no description available & (gnl|cdd|85101 : 227.0) no description available & (o24529|7omt8_medsa : 210.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (reliability: 746.0) & (original description: Putative 6OMT, Description = (RS)-norcoclaurine 6-O-methyltransferase, PFAM = PF00891)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf09883_136301-146166' '(at2g33590 : 394.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 217.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 137.0) no description available & (reliability: 788.0) & (original description: Putative ccr2, Description = Cinnamoyl-CoA reductase 2, PFAM = PF01370)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf11319_131832-138172' '(at1g20510 : 744.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36391 : 533.0) no description available & (gnl|cdd|30666 : 409.0) no description available & (o24145|4cl1_tobac : 331.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1488.0) & (original description: Putative 4CLL5, Description = 4-coumarate--CoA ligase-like 5, PFAM = PF13193;PF00501)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf12846_30044-33946' '(at2g22570 : 333.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 98.9) no description available & (reliability: 666.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf12976_18266-21998' '(o22308|7omt6_medsa : 294.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 248.0) no description available & (gnl|cdd|38388 : 197.0) no description available & (at4g35160 : 178.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf15227_95039-99396' '(at2g23910 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 225.0) no description available & (p51110|dfra_vitvi : 115.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 506.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T
'16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf17267_2622-7114' '(at5g67150 : 331.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 254.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 662.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 788.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 218.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 312.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00007351ctg001_1127-3780' '(at3g50740 : 262.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (p56725|zox_phavu : 180.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 132.0) no description available & (gnl|cdd|79510 : 84.6) no description available & (reliability: 524.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00016319ctg004_2399-5950' '(p56725|zox_phavu : 486.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 182.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 95.4) no description available & (reliability: 336.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 764.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 304.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 360.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01557_595710-599216' '(p56725|zox_phavu : 435.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g50740 : 196.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 165.0) no description available & (gnl|cdd|79510 : 90.4) no description available & (reliability: 392.0) & (original description: Putative PGSC0003DMG400035370, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 354.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 354.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 310.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 344.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 296.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 874.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben044scf00004018ctg000_4718-11274' '(p25872|pal1_tobac : 1414.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1199.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1080.0) no description available & (gnl|cdd|84620 : 710.0) no description available & (reliability: 2398.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben044scf00008842ctg003_1-5723' '(p25872|pal1_tobac : 1221.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1183.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1081.0) no description available & (gnl|cdd|84620 : 700.0) no description available & (reliability: 2366.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf03712_166303-171777' '(p25872|pal1_tobac : 1224.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1186.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1083.0) no description available & (gnl|cdd|84620 : 705.0) no description available & (reliability: 2372.0) & (original description: Putative pal, Description = Phenylanaline ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf04090_192912-199357' '(p25872|pal1_tobac : 1415.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1204.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1087.0) no description available & (gnl|cdd|84620 : 712.0) no description available & (reliability: 2408.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf04375_264067-271551' '(p45733|pal3_tobac : 1194.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1169.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1071.0) no description available & (gnl|cdd|84620 : 698.0) no description available & (reliability: 2338.0) & (original description: Putative PAL1, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf05442_364301-372955' '(p45733|pal3_tobac : 1417.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1189.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1087.0) no description available & (gnl|cdd|84620 : 707.0) no description available & (reliability: 2378.0) & (original description: Putative pal, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf12881_1229-6780' '(p45733|pal3_tobac : 1417.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1187.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1083.0) no description available & (gnl|cdd|84620 : 706.0) no description available & (reliability: 2374.0) & (original description: Putative pal, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T
'16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben044scf00002272ctg004_624-5831' '(q42797|tcmo_soybn : 866.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 824.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 418.0) no description available & (gnl|cdd|84486 : 357.0) no description available & (reliability: 1648.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T
'16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf01085_480282-485087' '(q42797|tcmo_soybn : 865.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 822.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 416.0) no description available & (gnl|cdd|84486 : 354.0) no description available & (reliability: 1644.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T
'16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf02316_150724-156465' '(p48522|tcmo_catro : 863.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g30490 : 822.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 414.0) no description available & (gnl|cdd|84486 : 349.0) no description available & (reliability: 1644.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T
'16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf06277_536692-539612' '(q42797|tcmo_soybn : 599.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 568.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 381.0) no description available & (gnl|cdd|84486 : 319.0) no description available & (reliability: 1136.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'nbv0.5scaffold4950_69376-75921' '(p31687|4cl2_soybn : 777.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (at1g65060 : 705.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 3 (4CL3); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 78268 Blast hits to 71395 proteins in 3651 species: Archae - 1111; Bacteria - 51774; Metazoa - 3299; Fungi - 4373; Plants - 2538; Viruses - 1; Other Eukaryotes - 15172 (source: NCBI BLink). & (gnl|cdd|36391 : 501.0) no description available & (gnl|cdd|30666 : 409.0) no description available & (reliability: 1410.0) & (original description: Putative 4CL, Description = 4-coumarate:CoA ligase, PFAM = PF00501;PF13193)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf00278_1544590-1550674' '(at4g19010 : 654.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83687 Blast hits to 76218 proteins in 3879 species: Archae - 1158; Bacteria - 54713; Metazoa - 3437; Fungi - 4716; Plants - 2771; Viruses - 1; Other Eukaryotes - 16891 (source: NCBI BLink). & (gnl|cdd|36391 : 474.0) no description available & (gnl|cdd|30666 : 392.0) no description available & (o24145|4cl1_tobac : 328.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1308.0) & (original description: Putative 4CLL6, Description = 4-coumarate--CoA ligase-like 6, PFAM = PF00501;PF13193)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf01063_510720-517835' '(p31687|4cl2_soybn : 769.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (at1g65060 : 706.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 3 (4CL3); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 78268 Blast hits to 71395 proteins in 3651 species: Archae - 1111; Bacteria - 51774; Metazoa - 3299; Fungi - 4373; Plants - 2538; Viruses - 1; Other Eukaryotes - 15172 (source: NCBI BLink). & (gnl|cdd|36391 : 502.0) no description available & (gnl|cdd|30666 : 411.0) no description available & (reliability: 1412.0) & (original description: Putative 4CL, Description = 4-coumarate:CoA ligase, PFAM = PF00501;PF13193)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02228_444289-452356' '(at4g05160 : 773.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity, fatty-acyl-CoA synthase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 86858 Blast hits to 79133 proteins in 3797 species: Archae - 1159; Bacteria - 54259; Metazoa - 3570; Fungi - 4802; Plants - 2877; Viruses - 1; Other Eukaryotes - 20190 (source: NCBI BLink). & (gnl|cdd|36391 : 511.0) no description available & (gnl|cdd|30666 : 426.0) no description available & (o24145|4cl1_tobac : 409.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1546.0) & (original description: Putative 4CLL7, Description = 4-coumarate--CoA ligase-like 7, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02413_91890-98655' '(o24145|4cl1_tobac : 832.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at1g51680 : 751.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 1 (4CL1); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 83069 Blast hits to 75791 proteins in 3772 species: Archae - 1181; Bacteria - 53827; Metazoa - 3457; Fungi - 4480; Plants - 2791; Viruses - 1; Other Eukaryotes - 17332 (source: NCBI BLink). & (gnl|cdd|36391 : 531.0) no description available & (gnl|cdd|30666 : 407.0) no description available & (reliability: 1502.0) & (original description: Putative 4CL2, Description = 4-coumarate--CoA ligase 2, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02688_80703-90855' '(gnl|cdd|81764 : 314.0) no description available & (gnl|cdd|36391 : 183.0) no description available & (at1g20480 : 84.3) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative glysoja_005367, Description = Long-chain-fatty-acid--AMP ligase FadD28, PFAM = PF00501;PF13450;PF14602;PF00550;PF00132)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf03224_8135-14712' '(o24145|4cl1_tobac : 901.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at3g21240 : 737.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 2 (4CL2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 (TAIR:AT1G51680.1); Has 86092 Blast hits to 78635 proteins in 3758 species: Archae - 1209; Bacteria - 54193; Metazoa - 3597; Fungi - 4717; Plants - 2816; Viruses - 1; Other Eukaryotes - 19559 (source: NCBI BLink). & (gnl|cdd|36391 : 513.0) no description available & (gnl|cdd|30666 : 417.0) no description available & (reliability: 1474.0) & (original description: Putative 4CL2, Description = 4-coumarate--CoA ligase 2, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf04362_358605-363441' '(gnl|cdd|36391 : 474.0) no description available & (at1g20500 : 450.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G38120.1); Has 82776 Blast hits to 75503 proteins in 3739 species: Archae - 1179; Bacteria - 53477; Metazoa - 3434; Fungi - 4583; Plants - 2754; Viruses - 1; Other Eukaryotes - 17348 (source: NCBI BLink). & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 344.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 856.0) & (original description: Putative 4CLL4, Description = 4-coumarate--CoA ligase-like 4, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf04701_36-7160' '(at4g19010 : 629.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83687 Blast hits to 76218 proteins in 3879 species: Archae - 1158; Bacteria - 54713; Metazoa - 3437; Fungi - 4716; Plants - 2771; Viruses - 1; Other Eukaryotes - 16891 (source: NCBI BLink). & (gnl|cdd|36391 : 470.0) no description available & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 304.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1258.0) & (original description: Putative 4CLL6, Description = 4-coumarate--CoA ligase-like 6, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf05750_296711-303877' '(at5g63380 : 642.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 485.0) no description available & (gnl|cdd|30666 : 372.0) no description available & (o24145|4cl1_tobac : 314.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1284.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf07623_249980-257129' '(o24145|4cl1_tobac : 1100.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at3g21240 : 798.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 2 (4CL2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 (TAIR:AT1G51680.1); Has 86092 Blast hits to 78635 proteins in 3758 species: Archae - 1209; Bacteria - 54193; Metazoa - 3597; Fungi - 4717; Plants - 2816; Viruses - 1; Other Eukaryotes - 19559 (source: NCBI BLink). & (gnl|cdd|36391 : 534.0) no description available & (gnl|cdd|30666 : 426.0) no description available & (reliability: 1596.0) & (original description: Putative 4CL1, Description = 4-coumarate--CoA ligase 1, PFAM = PF00501;PF13193)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf10885_101552-113602' '(at5g63380 : 600.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 479.0) no description available & (gnl|cdd|30666 : 370.0) no description available & (o24145|4cl1_tobac : 316.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1200.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF13193;PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf10885_101602-107619' '(at5g63380 : 168.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 138.0) no description available & (gnl|cdd|30666 : 114.0) no description available & (q42982|4cl2_orysa : 113.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative 4CL, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF00501)' T
'16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf12725_66466-71449' '(at5g63380 : 488.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 473.0) no description available & (gnl|cdd|30666 : 369.0) no description available & (o24145|4cl1_tobac : 313.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 976.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF00501;PF13193)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf01062_96839-102858' '(at5g48930 : 527.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 350.0) no description available & (o23917|hcbt2_diaca : 337.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1054.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf02562_100660-105169' '(at5g48930 : 504.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 346.0) no description available & (o23917|hcbt2_diaca : 340.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1008.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03224_420106-434494' '(at5g48930 : 705.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 386.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 376.0) no description available & (reliability: 1410.0) & (original description: Putative HCT6, Description = Hydroxcinnamoyl-CoA quinate/shikimate hydroxycinnamoyltransferase, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03790_83233-87424' '(at5g48930 : 519.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 352.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 348.0) no description available & (reliability: 1038.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03862_218641-221963' '(gnl|cdd|66174 : 256.0) no description available & (at5g48930 : 231.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 192.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 462.0) & (original description: Putative ACT, Description = Agmatine coumaroyltransferase-1, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf05767_176293-179606' '(gnl|cdd|66174 : 231.0) no description available & (at5g48930 : 204.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 180.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 408.0) & (original description: Putative AT1, Description = Putrescine hydroxycinnamoyl transferase, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf06295_106539-109852' '(gnl|cdd|66174 : 257.0) no description available & (at5g48930 : 215.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 195.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 430.0) & (original description: Putative ACT, Description = Anthranilate N-benzoyltransferase protein, putative, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf09061_66375-69682' '(gnl|cdd|66174 : 262.0) no description available & (at5g48930 : 207.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 191.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 414.0) & (original description: Putative ACT, Description = Anthranilate N-benzoyltransferase protein, putative, PFAM = PF02458)' T
'16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf09928_98275-106973' '(at5g48930 : 719.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 389.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 381.0) no description available & (reliability: 1438.0) & (original description: Putative HST, Description = Shikimate O-hydroxycinnamoyltransferase, PFAM = PF02458)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'nbv0.5scaffold1804_176579-181767' '(o48922|c98a2_soybn : 903.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 876.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 466.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1752.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben044scf00004491ctg003_1005-2918' '(o48922|c98a2_soybn : 214.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 213.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 155.0) no description available & (reliability: 426.0) & (original description: Putative C3H, Description = Coumarate-3-hydroxylase, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00077_280688-291266' '(at2g40890 : 672.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (o48922|c98a2_soybn : 666.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1344.0) & (original description: Putative c3'h, Description = p-coumarate 3-hydroxylase, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00077_500308-506827' '(o48922|c98a2_soybn : 788.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 786.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 480.0) no description available & (gnl|cdd|84486 : 321.0) no description available & (reliability: 1572.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00857_222695-230797' '(at2g40890 : 786.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (o48922|c98a2_soybn : 783.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 483.0) no description available & (gnl|cdd|84486 : 318.0) no description available & (reliability: 1572.0) & (original description: Putative C3H1, Description = p-coumaroyl quinate/shikimate 3'-hydroxylase, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf01018_798125-804372' '(o48922|c98a2_soybn : 707.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 701.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 475.0) no description available & (gnl|cdd|84486 : 311.0) no description available & (reliability: 1402.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf03170_383534-389949' '(o48922|c98a2_soybn : 698.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 694.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 476.0) no description available & (gnl|cdd|84486 : 314.0) no description available & (reliability: 1388.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T
'16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf10560_161543-166994' '(o48922|c98a2_soybn : 899.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 874.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 462.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1748.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'nbv0.3scaffold43780_4291-13475' '(at3g62000 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (gnl|cdd|36876 : 264.0) no description available & (gnl|cdd|85557 : 247.0) no description available & (q9xgd5|camt2_maize : 154.0) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) - Zea mays (Maize) & (reliability: 710.0) & (original description: Putative safC, Description = Putative O-methyltransferase, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'nbv0.5scaffold1429_1813-52523' '(o24144|camt1_tobac : 292.0) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 266.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 199.0) no description available & (gnl|cdd|36876 : 168.0) no description available & (reliability: 532.0) & (original description: Putative gpm99a, Description = Caffeoyl-CoA O-methyltransferase, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben044scf00001639ctg011_557-3012' '(at3g62000 : 80.9) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (reliability: 161.8) & (original description: Putative At3g62000, Description = S-adenosyl-L-methionine-dependent methyltransferase-like protein, PFAM = )' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04003_856889-860005' '(o24151|camt4_tobac : 495.0) Caffeoyl-CoA O-methyltransferase 4 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 4) (CCoAMT-4) (CCoAOMT-4) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 442.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 316.0) no description available & (gnl|cdd|36876 : 279.0) no description available & (reliability: 884.0) & (original description: Putative CCOAOMT1, Description = Caffeoyl-CoA O-methyltransferase 1, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04028_278713-282129' '(at4g26220 : 326.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 294.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 265.0) no description available & (gnl|cdd|36876 : 263.0) no description available & (reliability: 652.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04028_285659-289896' '(at4g26220 : 316.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 302.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 263.0) no description available & (gnl|cdd|36876 : 258.0) no description available & (reliability: 632.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf06156_101601-273764' '(at3g62000 : 315.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (gnl|cdd|36876 : 237.0) no description available & (gnl|cdd|85557 : 227.0) no description available & (q9xgd5|camt2_maize : 148.0) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) - Zea mays (Maize) & (reliability: 630.0) & (original description: Putative safC, Description = Putative O-methyltransferase, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf06344_666613-670520' '(q42945|camt6_tobac : 491.0) Caffeoyl-CoA O-methyltransferase 6 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 6) (CCoAMT-6) (CCoAOMT-6) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 448.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 320.0) no description available & (gnl|cdd|36876 : 284.0) no description available & (reliability: 896.0) & (original description: Putative CCOAOMT6, Description = Caffeoyl-CoA O-methyltransferase 6, PFAM = PF01596)' T
'16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf13886_71569-87252' '(at4g26220 : 327.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 275.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 269.0) no description available & (gnl|cdd|36876 : 262.0) no description available & (reliability: 654.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.3scaffold41316_12124-18483' '(at5g14700 : 148.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 128.0) no description available & (reliability: 296.0) & (original description: Putative BnaA02g02250D, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.5scaffold2527_95563-102565' '(at1g15950 : 496.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 421.0) no description available & (p51104|dfra_diaca : 246.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 138.0) no description available & (reliability: 992.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.5scaffold2527_95584-102695' '(at1g15950 : 500.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 420.0) no description available & (p51104|dfra_diaca : 245.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 139.0) no description available & (reliability: 1000.0) & (original description: Putative ccr, Description = Cinnamoyl CoA reductase, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben044scf00000100ctg008_1-4949' '(at1g15950 : 502.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 420.0) no description available & (p51104|dfra_diaca : 241.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 138.0) no description available & (reliability: 1004.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben044scf00017878ctg002_1-2483' '(at2g23910 : 133.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 110.0) no description available & (reliability: 264.0) & (original description: Putative At2g23910, Description = Cinnamoyl-CoA reductase-related family protein, PFAM = )' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf01063_206550-210035' '(at2g23910 : 246.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 202.0) no description available & (p51110|dfra_vitvi : 102.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 462.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf02385_80089-86549' '(at2g23910 : 234.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 227.0) no description available & (p51110|dfra_vitvi : 107.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 450.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf04220_841925-847990' '(at1g15950 : 499.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 418.0) no description available & (p51104|dfra_diaca : 238.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 139.0) no description available & (reliability: 998.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf06349_221629-228509' '(at5g14700 : 313.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 223.0) no description available & (p51110|dfra_vitvi : 98.6) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 626.0) & (original description: Putative CCR1, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf07995_11923-40025' '(at5g58490 : 511.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 219.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 122.0) no description available & (reliability: 1022.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf11232_116519-121502' '(at5g14700 : 238.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 213.0) no description available & (p51110|dfra_vitvi : 118.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 476.0) & (original description: Putative CCR1, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T
'16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf15227_95039-99396' '(at2g23910 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 225.0) no description available & (p51110|dfra_vitvi : 115.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 494.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 636.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 700.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben044scf00007170ctg007_2156-7132' '(at4g36220 : 699.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 453.0) no description available & (q42798|c93a1_soybn : 338.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 283.0) no description available & (reliability: 1398.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 638.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 712.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00158_473433-478963' '(at4g36220 : 700.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 452.0) no description available & (o81974|c71d8_soybn : 347.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|84486 : 284.0) no description available & (reliability: 1400.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 666.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01001_115179-119542' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 473.0) no description available & (at3g26310 : 366.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 303.0) no description available & (reliability: 684.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 644.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01276_336438-339763' '(gnl|cdd|35378 : 248.0) no description available & (gnl|cdd|84486 : 199.0) no description available & (at2g45550 : 186.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (q42798|c93a1_soybn : 181.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 368.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 684.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01433_687388-711506' '(at4g36220 : 717.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 450.0) no description available & (o81974|c71d8_soybn : 347.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|84486 : 290.0) no description available & (reliability: 1434.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 748.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 668.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'nbv0.3scaffold421_126746-129107' '(gnl|cdd|85101 : 144.0) no description available & (q8w013|comt1_catro : 129.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 125.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 116.0) no description available & (reliability: 250.0) & (original description: Putative COMT2, Description = Caffeate O-methyltransferase, PFAM = PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben044scf00003897ctg001_59000-65586' '(p28002|comt1_medsa : 410.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 392.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 347.0) no description available & (gnl|cdd|85101 : 316.0) no description available & (reliability: 784.0) & (original description: Putative comt, Description = Caffeic acid O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben044scf00010384ctg022_6249-11676' '(p28002|comt1_medsa : 414.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 393.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 343.0) no description available & (gnl|cdd|85101 : 319.0) no description available & (reliability: 786.0) & (original description: Putative OMT1, Description = Caffeic acid 3-O-methyltransferase 1, PFAM = PF08100;PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf00225_8544-13722' '(q9fqy8|comt1_capan : 669.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Capsicum annuum (Bell pepper) & (at5g54160 : 554.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 382.0) no description available & (gnl|cdd|85101 : 354.0) no description available & (reliability: 1108.0) & (original description: Putative COMT, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf00700_884926-897637' '(p28002|comt1_medsa : 414.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 392.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 348.0) no description available & (gnl|cdd|85101 : 317.0) no description available & (reliability: 784.0) & (original description: Putative comt, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf01239_223210-227817' '(q9fqy8|comt1_capan : 670.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Capsicum annuum (Bell pepper) & (at5g54160 : 553.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 386.0) no description available & (gnl|cdd|85101 : 356.0) no description available & (reliability: 1106.0) & (original description: Putative COMT, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf02026_190659-197776' '(p28002|comt1_medsa : 400.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 382.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 334.0) no description available & (gnl|cdd|85101 : 318.0) no description available & (reliability: 764.0) & (original description: Putative OMT, Description = Catechol O-methyltransferase, PFAM = PF08100;PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf03085_755684-759388' '(o24529|7omt8_medsa : 337.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 273.0) no description available & (gnl|cdd|38388 : 212.0) no description available & (at4g35160 : 204.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf03265_25651-30863' '(q8w013|comt1_catro : 356.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 330.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 315.0) no description available & (gnl|cdd|85101 : 273.0) no description available & (reliability: 660.0) & (original description: Putative FOMT6, Description = O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf05582_220320-224383' '(q8w013|comt1_catro : 402.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 382.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3Ã-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3Ã-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 349.0) no description available & (gnl|cdd|85101 : 308.0) no description available & (reliability: 764.0) & (original description: Putative COMT1, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF00891;PF08100)' T
'16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.3scaffold30802_550-4578' '(q9zrf1|mtdh_fraan : 516.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 490.0) no description available & (at4g39330 : 439.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 352.0) no description available & (reliability: 878.0) & (original description: Putative 10HGO, Description = 8-hydroxygeraniol dehydrogenase, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.3scaffold56063_6393-13112' '(gnl|cdd|35246 : 405.0) no description available & (q9zrf1|mtdh_fraan : 387.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g37980 : 342.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 307.0) no description available & (reliability: 684.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.5scaffold430_150011-521288' '(q9zrf1|mtdh_fraan : 514.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 475.0) no description available & (at4g39330 : 432.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 336.0) no description available & (reliability: 864.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.5scaffold430_761005-767573' '(gnl|cdd|35246 : 464.0) no description available & (q9zrf1|mtdh_fraan : 451.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 405.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 339.0) no description available & (reliability: 810.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00000692ctg018_1678-6188' '(gnl|cdd|35246 : 374.0) no description available & (q9zrf1|mtdh_fraan : 303.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 274.0) no description available & (at4g37980 : 259.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative MTD1, Description = Putative mannitol dehydrogenase 1, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00003450ctg005_11984-16168' '(gnl|cdd|35246 : 486.0) no description available & (q9zrf1|mtdh_fraan : 474.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 392.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 345.0) no description available & (reliability: 784.0) & (original description: Putative CAD, Description = Probable mannitol dehydrogenase, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00060119ctg000_17642-22002' '(q9zrf1|mtdh_fraan : 511.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 470.0) no description available & (at4g37980 : 427.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 330.0) no description available & (reliability: 854.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf00942_29360-33470' '(gnl|cdd|35246 : 485.0) no description available & (q9zrf1|mtdh_fraan : 473.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 389.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 348.0) no description available & (reliability: 778.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf01313_2354-9569' '(gnl|cdd|35246 : 471.0) no description available & (q9zrf1|mtdh_fraan : 461.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 412.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 346.0) no description available & (reliability: 824.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf02907_407589-411956' '(q9zrf1|mtdh_fraan : 483.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 445.0) no description available & (at4g37980 : 402.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 305.0) no description available & (reliability: 804.0) & (original description: Putative cad5, Description = Cinnamyl alcohol dehydrogenase 5, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf02907_635297-640329' '(q9zrf1|mtdh_fraan : 533.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 493.0) no description available & (at4g37970 : 456.0) cinnamyl alcohol dehydrogenase 6 (CAD6); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 9 (TAIR:AT4G39330.1); Has 35385 Blast hits to 35371 proteins in 2946 species: Archae - 789; Bacteria - 23408; Metazoa - 1218; Fungi - 2700; Plants - 2633; Viruses - 3; Other Eukaryotes - 4634 (source: NCBI BLink). & (gnl|cdd|31264 : 337.0) no description available & (reliability: 912.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf03410_62656-72706' '(at4g39330 : 375.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (o82515|mtdh_medsa : 354.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Medicago sativa (Alfalfa) & (gnl|cdd|35246 : 343.0) no description available & (gnl|cdd|31264 : 241.0) no description available & (reliability: 750.0) & (original description: Putative cad1, Description = Putative sinapyl alcohol dehydrogenase, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf04906_137102-143031' '(gnl|cdd|35246 : 460.0) no description available & (q9zrf1|mtdh_fraan : 457.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g37980 : 402.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 337.0) no description available & (reliability: 804.0) & (original description: Putative GEDH1, Description = Geraniol dehydrogenase 1, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf05245_238126-242298' '(gnl|cdd|35246 : 439.0) no description available & (at4g39330 : 403.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (q9zrf1|mtdh_fraan : 398.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 351.0) no description available & (reliability: 806.0) & (original description: Putative cad3, Description = Cinnamyl alcohol dehydrogenase 3, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf07488_60390-74843' '(gnl|cdd|35246 : 443.0) no description available & (at4g39330 : 424.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (q9zrf1|mtdh_fraan : 403.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 361.0) no description available & (reliability: 848.0) & (original description: Putative cad3, Description = Cinnamyl alcohol dehydrogenase 3, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf08134_168580-175837' '(p30360|cadh9_tobac : 628.0) Cinnamyl alcohol dehydrogenase (EC 1.1.1.195) (CAD) - Nicotiana tabacum (Common tobacco) & (at3g19450 : 502.0) Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.; ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink). & (gnl|cdd|35246 : 472.0) no description available & (gnl|cdd|31264 : 326.0) no description available & (reliability: 1004.0) & (original description: Putative CAD14, Description = Probable cinnamyl alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf11785_215413-219299' '(p30359|cadh4_tobac : 560.0) Cinnamyl alcohol dehydrogenase (EC 1.1.1.195) (CAD) - Nicotiana tabacum (Common tobacco) & (at3g19450 : 513.0) Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.; ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink). & (gnl|cdd|35246 : 475.0) no description available & (gnl|cdd|31264 : 326.0) no description available & (reliability: 1026.0) & (original description: Putative CAD1, Description = Cinnamyl alcohol dehydrogenase 1, PFAM = PF00107;PF08240)' T
'16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf15792_149277-153075' '(at1g72680 : 531.0) cinnamyl-alcohol dehydrogenase (CAD1); FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, zinc ion binding, cofactor binding; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 36986 Blast hits to 36967 proteins in 3073 species: Archae - 711; Bacteria - 24167; Metazoa - 1364; Fungi - 2774; Plants - 3348; Viruses - 3; Other Eukaryotes - 4619 (source: NCBI BLink). & (gnl|cdd|35246 : 437.0) no description available & (o82035|cadh2_picab : 345.0) Cinnamyl alcohol dehydrogenase 2 (EC 1.1.1.195) (CAD 2) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|31264 : 341.0) no description available & (reliability: 1062.0) & (original description: Putative cad2, Description = Cinnamyl-alcohol dehydrogenase 2, PFAM = PF00107;PF08240)' T
'16.2.1.1001' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'trans-cinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.1.1002' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumarate' 'secondary metabolism, phenylpropanoids' M
'16.2.1.1003' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumaryl aldehyde' 'secondary metabolism, phenylpropanoids' M
'16.2.1.1004' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumaryl alcohol' 'secondary metabolism, phenylpropanoids' M
'16.2.1.1007' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'coniferyl alcohol' 'secondary metabolism' M
'16.2.1.1008' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'coniferyl aldehyde' 'secondary metabolism' M
'16.2.1.1010' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'sinapyl alcohol' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M
'16.2.1.1011' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'sinapinaldehyde' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M
'16.2.99' 'secondary metabolism.phenylpropanoids.unspecified' '' ''
'16.2.99.1001' 'secondary metabolism.phenylpropanoids.unspecified' '3-dehydroquinate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1002' 'secondary metabolism.phenylpropanoids.unspecified' '2,5-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1003' 'secondary metabolism.phenylpropanoids.unspecified' 'trans-3,5-dimethoxy-4-hydroxycinnamaldehyde' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1005' 'secondary metabolism.phenylpropanoids.unspecified' 'n-cinnamoylglycine' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1006' 'secondary metabolism.phenylpropanoids.unspecified' 'coumarine' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1007' 'secondary metabolism.phenylpropanoids.unspecified' '5-caffeoylquinate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1008' 'secondary metabolism.phenylpropanoids.unspecified' '4-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1009' 'secondary metabolism.phenylpropanoids.unspecified' '4-hydroxy-3-methoxycinnamaldehyde' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1011' 'secondary metabolism.phenylpropanoids.unspecified' '4-caffeoylquinate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1012' 'secondary metabolism.phenylpropanoids.unspecified' '4-aminocinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1013' 'secondary metabolism.phenylpropanoids.unspecified' '3-hydroxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1014' 'secondary metabolism.phenylpropanoids.unspecified' '3-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1015' 'secondary metabolism.phenylpropanoids.unspecified' '3,4-dihydroxyhydrocinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1016' 'secondary metabolism.phenylpropanoids.unspecified' '3,4-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1017' 'secondary metabolism.phenylpropanoids.unspecified' '3,5-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1018' 'secondary metabolism.phenylpropanoids.unspecified' '3,4,5-trimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1019' 'secondary metabolism.phenylpropanoids.unspecified' '2-hydroxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1020' 'secondary metabolism.phenylpropanoids.unspecified' '2-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1021' 'secondary metabolism.phenylpropanoids.unspecified' '2-coumarate' 'secondary metabolism, phenylpropanoids (ligning biosynthesis)' M
'16.2.99.1022' 'secondary metabolism.phenylpropanoids.unspecified' 'benzoate' 'secondary metabolism, phenylpropanoids (ligning biosynthesis)' M
'16.2.99.1023' 'secondary metabolism.phenylpropanoids.unspecified' 'caffeate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M
'16.2.99.1024' 'secondary metabolism.phenylpropanoids.unspecified' 'chlorogenate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1025' 'secondary metabolism.phenylpropanoids.unspecified' 'cinnamate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M
'16.2.99.1026' 'secondary metabolism.phenylpropanoids.unspecified' 'ferulate' 'secondary metabolism, phenylpropanoids (lignin biosyntehesis)' M
'16.2.99.1027' 'secondary metabolism.phenylpropanoids.unspecified' 'kaempferol-3-o-rutinoside' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1028' 'secondary metabolism.phenylpropanoids.unspecified' 'naringenin' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1029' 'secondary metabolism.phenylpropanoids.unspecified' 'rutin' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1030' 'secondary metabolism.phenylpropanoids.unspecified' 'salicylate' 'secondary metabolism, phenylpropanoids' M
'16.2.99.1031' 'secondary metabolism.phenylpropanoids.unspecified' 'sinapinate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M
'16.2.99.1032' 'secondary metabolism.phenylpropanoids.unspecified' 'chavicol' 'p-allylphenol' M
'16.2.99.1033' 'secondary metabolism.phenylpropanoids.unspecified' 'methyl-chavicol' 'Estragole, or p-allylanisole' M
'16.2.99.1034' 'secondary metabolism.phenylpropanoids.unspecified' 'eugenol' '2-methoxy-4-(2-propenyl)phenol' M
'16.2.99.1035' 'secondary metabolism.phenylpropanoids.unspecified' 'methyl-eugenol' '' M
'16.2.99.1036' 'secondary metabolism.phenylpropanoids.unspecified' 'dihydro 4-coumaryl alcohol' '' M
'16.2.99.1037' 'secondary metabolism.phenylpropanoids.unspecified' 'dihydro coniferyl alcohol' '' M
'16.2.99.1038' 'secondary metabolism.phenylpropanoids.unspecified' 'alpha-hydroxyphenylpropionate' '' M
'16.2.99.1039' 'secondary metabolism.phenylpropanoids.unspecified' 'acetophenone' '' M
'16.2.99.1040' 'secondary metabolism.phenylpropanoids.unspecified' 'benzaldehyde' '' M
'16.2.99.1041' 'secondary metabolism.phenylpropanoids.unspecified' 'benzylalcohol' '' M
'16.2.99.1042' 'secondary metabolism.phenylpropanoids.unspecified' 'cinnamaldehyde' '' M
'16.2.99.1043' 'secondary metabolism.phenylpropanoids.unspecified' 'phenylacetate' '' M
'16.2.99.1044' 'secondary metabolism.phenylpropanoids.unspecified' 'mandelic acid' '' M
'16.2.99.1045' 'secondary metabolism.phenylpropanoids.unspecified' 'benzoylformic acid' '' M
'16.2.99.1046' 'secondary metabolism.phenylpropanoids.unspecified' 'beta-hydroxyphenylpropionate' '' M
'16.2.99.1047' 'secondary metabolism.phenylpropanoids.unspecified' 'beta-oxophenylpropionate' '' M
'16.2.99.1048' 'secondary metabolism.phenylpropanoids.unspecified' 'phenylethanol' '' M
'16.2.99.1051' 'secondary metabolism.phenylpropanoids.unspecified' '3-caffeoylquinate' '' M
'16.3' 'secondary metabolism.shikimate pathway' '' ''
'16.4' 'secondary metabolism.N misc' '' ''
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold17248_212-5801' '(at2g29260 : 171.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 145.0) no description available & (gnl|cdd|35944 : 137.0) no description available & (reliability: 324.0) & (original description: Putative tr, Description = Tropinone reductase I, PFAM = PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold35632_12519-19220' '(at1g35190 : 469.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (gnl|cdd|33294 : 249.0) no description available & (gnl|cdd|35365 : 245.0) no description available & (q07353|fl3h_pethy : 93.6) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (reliability: 938.0) & (original description: Putative efe, Description = 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, PFAM = PF14226;PF03171)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold47230_23-16237' '(at2g20340 : 751.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 743.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 636.0) no description available & (gnl|cdd|84666 : 474.0) no description available & (reliability: 1502.0) & (original description: Putative ELI5, Description = Tyrosine decarboxylase 1, PFAM = PF00282)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold56158_1-6065' '(at1g08470 : 297.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36733 : 178.0) no description available & (reliability: 594.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold68423_5038-8702' '(at4g20840 : 609.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 1150.0) & (original description: Putative BBE1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold102929_905-3688' '(at3g57030 : 398.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 353.0) no description available & (p18417|stsy_catro : 150.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 121.0) no description available & (reliability: 796.0) & (original description: Putative BnaA10g14270D, Description = BnaA10g14270D protein, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold97_1020366-1030729' '(at3g57030 : 114.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 111.0) no description available & (p18417|stsy_catro : 106.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 228.0) & (original description: Putative SS6, Description = Strictosidine synthase 1, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold457_284347-295186' '(at5g06060 : 279.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 194.0) no description available & (gnl|cdd|77008 : 194.0) no description available & (q75kh3|grdh_orysa : 85.9) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF00106;PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold1183_318567-322568' '(at3g59530 : 591.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36733 : 390.0) no description available & (p18417|stsy_catro : 160.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 102.0) no description available & (reliability: 1182.0) & (original description: Putative SSL13, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 13, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold3358_5761-9741' '(at5g06060 : 326.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 247.0) no description available & (gnl|cdd|35944 : 217.0) no description available & (q75kh3|grdh_orysa : 99.4) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 594.0) & (original description: Putative trI, Description = Tropinone reductase, PFAM = PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00022939ctg000_7011-8942' '(at1g08470 : 164.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative SS9, Description = Strictosidine synthase family protein, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00026899ctg001_1390-3888' '(at3g51420 : 142.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 4 (SSL4); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51430.1); Has 1288 Blast hits to 1275 proteins in 300 species: Archae - 9; Bacteria - 428; Metazoa - 223; Fungi - 4; Plants - 454; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36733 : 87.7) no description available & (reliability: 284.0) & (original description: Putative SSL4, Description = Strictosidine synthase family protein, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00033342ctg009_3001-5329' '(at1g08470 : 163.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative SS9, Description = Strictosidine synthase family protein, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00034511ctg010_959-3402' '(gnl|cdd|36733 : 288.0) no description available & (at3g57030 : 221.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|66743 : 108.0) no description available & (p18417|stsy_catro : 90.9) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 442.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00046222ctg001_1-4690' '(at3g46500 : 264.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 7979 Blast hits to 7962 proteins in 970 species: Archae - 0; Bacteria - 1125; Metazoa - 119; Fungi - 1055; Plants - 4286; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|33294 : 145.0) no description available & (gnl|cdd|35365 : 144.0) no description available & (reliability: 512.0) & (original description: Putative At1g35190, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF03171)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf00907_47035-63447' '(gnl|cdd|36733 : 347.0) no description available & (at2g41290 : 306.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p18417|stsy_catro : 138.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 109.0) no description available & (reliability: 612.0) & (original description: Putative SSL2, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 2, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01274_336268-349226' '(gnl|cdd|36733 : 335.0) no description available & (at2g41290 : 292.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p18417|stsy_catro : 121.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 106.0) no description available & (reliability: 584.0) & (original description: Putative SS10, Description = Strictosidine synthase family protein, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01274_359609-364350' '(at3g57030 : 453.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 388.0) no description available & (p18417|stsy_catro : 159.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 128.0) no description available & (reliability: 906.0) & (original description: Putative SSL10, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 10, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01281_6431-16087' '(at4g20840 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 105.0) no description available & (reliability: 1158.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01395_294148-297743' '(at1g30700 : 581.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 1050.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01748_376506-379671' '(at1g30700 : 389.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 91.4) no description available & (reliability: 716.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02271_443498-447021' '(p17770|ddc_catro : 753.0) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC) (DOPA decarboxylase) (Tryptophan decarboxylase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g20340 : 585.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|35847 : 562.0) no description available & (gnl|cdd|84666 : 496.0) no description available & (reliability: 1170.0) & (original description: Putative tdc1, Description = Tryptophan decarboxylase, PFAM = PF00282)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02310_403621-412493' '(at1g08470 : 620.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36733 : 412.0) no description available & (p18417|stsy_catro : 153.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 113.0) no description available & (reliability: 1240.0) & (original description: Putative SSL3, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 3, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02460_259668-267223' '(gnl|cdd|36733 : 217.0) no description available & (at3g51430 : 175.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (gnl|cdd|66743 : 91.9) no description available & (reliability: 350.0) & (original description: Putative glysoja_026180, Description = Adipocyte plasma membrane-associated protein, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02632_335427-346378' '(at3g57030 : 114.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 111.0) no description available & (p18417|stsy_catro : 105.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 228.0) & (original description: Putative SS6, Description = Strictosidine synthase family protein, PFAM = )' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02857_228549-232048' '(q06088|tydc4_petcr : 725.0) Tyrosine decarboxylase 4 (EC 4.1.1.25) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g20340 : 606.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|35847 : 553.0) no description available & (gnl|cdd|84666 : 475.0) no description available & (reliability: 1212.0) & (original description: Putative TYDC5, Description = Tyrosine/DOPA decarboxylase 5, PFAM = PF00282)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02877_259542-270142' '(at3g57030 : 417.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 339.0) no description available & (p18417|stsy_catro : 171.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 126.0) no description available & (reliability: 834.0) & (original description: Putative Sb10g023490, Description = Putative uncharacterized protein Sb10g023490, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf03885_797659-804358' '(at1g35190 : 408.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (gnl|cdd|35365 : 239.0) no description available & (gnl|cdd|33294 : 219.0) no description available & (q06942|fl3h_maldo : 90.9) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 816.0) & (original description: Putative LOC100192575, Description = Iron ion binding protein, PFAM = PF14226;PF03171)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04243_49075-54086' '(at5g06060 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 237.0) no description available & (gnl|cdd|77008 : 215.0) no description available & (q75kh3|grdh_orysa : 89.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04325_58372-66300' '(at3g57030 : 525.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 416.0) no description available & (p18417|stsy_catro : 177.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 125.0) no description available & (reliability: 1050.0) & (original description: Putative SSL10, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 10, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04977_372512-391543' '(at2g20340 : 742.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 730.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 632.0) no description available & (gnl|cdd|84666 : 472.0) no description available & (reliability: 1484.0) & (original description: Putative ELI5, Description = Tyrosine decarboxylase 1, PFAM = PF00282)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf05980_145070-151395' '(at5g06060 : 296.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 218.0) no description available & (q75kh3|grdh_orysa : 98.6) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 556.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf06305_526970-531006' '(at3g59530 : 597.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36733 : 383.0) no description available & (p18417|stsy_catro : 152.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 103.0) no description available & (reliability: 1194.0) & (original description: Putative SSL13, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 13, PFAM = PF03088)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf08208_461416-465092' '(at4g20840 : 604.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 102.0) no description available & (reliability: 1146.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf09670_140312-182508' '(at1g07440 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: response to cadmium ion, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT2G29340.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 243.0) no description available & (gnl|cdd|77008 : 222.0) no description available & (q75kh3|grdh_orysa : 112.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf10927_127284-144152' '(at2g20340 : 745.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 738.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 628.0) no description available & (gnl|cdd|84666 : 467.0) no description available & (reliability: 1490.0) & (original description: Putative ddc, Description = Aromatic-L-amino-acid decarboxylase, PFAM = PF00282)' T
'16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf15192_196694-199668' '(at3g57030 : 426.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 339.0) no description available & (p18417|stsy_catro : 164.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 125.0) no description available & (reliability: 852.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = PF03088)' T
'16.4.1.1001' 'secondary metabolism.N misc.alkaloid-like' 'calystegine a3' 'secondary metabolism, alkaloids' M
'16.4.1.1001' 'secondary metabolism.N misc.alkaloid-like' 'nicotine' 'secondary metabolism, alkaloids' M
'16.4.1.1002' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b1' 'secondary metabolism, alkaloids' M
'16.4.1.1003' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b2' 'secondary metabolism, alkaloids' M
'16.4.1.1004' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b3' 'secondary metabolism, alkaloids' M
'16.4.1.1005' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b4' 'secondary metabolism, alkaloids' M
'16.4.1.1006' 'secondary metabolism.N misc.alkaloid-like' 'calystegine c1' 'secondary metabolism, alkaloids' M
'16.4.1.1007' 'secondary metabolism.N misc.alkaloid-like' 'n-methyl-calystegine b2' 'secondary metabolism, alkaloids' M
'16.4.2' 'secondary metabolism.N misc.betaine' '' ''
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold20195_1-9492' '(at3g48170 : 706.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 681.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 563.0) no description available & (gnl|cdd|37661 : 544.0) no description available & (reliability: 1412.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold20195_4-9678' '(at3g48170 : 658.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 650.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 558.0) no description available & (gnl|cdd|37661 : 541.0) no description available & (reliability: 1316.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold23372_9136-18270' '(at3g66658 : 1029.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37665 : 792.0) no description available & (gnl|cdd|84580 : 388.0) no description available & (p17202|badh_spiol : 221.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 2058.0) & (original description: Putative ALDH22A1, Description = Aldehyde dehydrogenase 22A1, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.5scaffold1895_338986-348660' '(at3g48170 : 646.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 634.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 545.0) no description available & (gnl|cdd|37661 : 528.0) no description available & (reliability: 1292.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.5scaffold1895_339383-343133' '(at3g48170 : 222.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p28237|badh_betvu : 222.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (gnl|cdd|84580 : 189.0) no description available & (gnl|cdd|37661 : 177.0) no description available & (reliability: 444.0) & (original description: Putative aldA, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf02111_1103328-1117560' '(at3g66658 : 1028.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37665 : 790.0) no description available & (gnl|cdd|84580 : 390.0) no description available & (p17202|badh_spiol : 219.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 2056.0) & (original description: Putative ALDH22A1, Description = Aldehyde dehydrogenase 22A1, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf02237_161239-179087' '(at1g74920 : 759.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (p17202|badh_spiol : 748.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 577.0) no description available & (gnl|cdd|37661 : 574.0) no description available & (reliability: 1518.0) & (original description: Putative badh, Description = Betaine aldehyde dehydrogenase, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf07162_435944-447435' '(p17202|badh_spiol : 756.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (at1g74920 : 733.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (gnl|cdd|37661 : 575.0) no description available & (gnl|cdd|84580 : 574.0) no description available & (reliability: 1466.0) & (original description: Putative betB, Description = Betaine aldehyde dehydrogenase, NAD-dependent, PFAM = PF00171)' T
'16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf16278_9116-19685' '(p17202|badh_spiol : 757.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (at1g74920 : 730.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (gnl|cdd|84580 : 576.0) no description available & (gnl|cdd|37661 : 574.0) no description available & (reliability: 1460.0) & (original description: Putative badh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T
'16.4.3' 'secondary metabolism.N misc.cyanogenic glycosides' '' ''
'16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'nbv0.5scaffold4505_15901-39423' '(at3g23490 : 199.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 196.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 117.0) no description available & (reliability: 398.0) & (original description: Putative cynS, Description = Cyanate hydratase, PFAM = PF02560)' T
'16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf00367_1004864-1013815' '(at3g23490 : 203.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 197.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 115.0) no description available & (reliability: 406.0) & (original description: Putative cynS, Description = Cyanate hydratase, PFAM = PF02560)' T
'16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf00367_1025481-1035802' '(at3g23490 : 210.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 206.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 126.0) no description available & (reliability: 420.0) & (original description: Putative CYN, Description = Cyanate hydratase, PFAM = PF02560)' T
'16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf05670_118183-125710' '(at3g23490 : 211.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 201.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 125.0) no description available & (reliability: 422.0) & (original description: Putative CYN, Description = Cyanate hydratase, PFAM = PF02560)' T
'16.5' 'secondary metabolism.sulfur-containing' 'niben101scf11245_129774-135986' '(at1g10500 : 216.0) Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.; chloroplast-localized ISCA-like protein (CPISCA); CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT5G03905.1); Has 10385 Blast hits to 10384 proteins in 1842 species: Archae - 43; Bacteria - 5944; Metazoa - 237; Fungi - 240; Plants - 172; Viruses - 0; Other Eukaryotes - 3749 (source: NCBI BLink). & (gnl|cdd|36336 : 158.0) no description available & (gnl|cdd|30664 : 137.0) no description available & (reliability: 432.0) & (original description: Putative slr1417, Description = Uncharacterized protein slr1417, PFAM = PF01521)' T
'16.5.1' 'secondary metabolism.sulfur-containing.glucosinolates' '' ''
'16.5.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis' '' ''
'16.5.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic' '' ''
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 834.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1048.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1090.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 852.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T
'16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 856.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'16.5.1.1.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate synthase (MAM)' '' ''
'16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben044scf00029861ctg010_482-6677' '(at4g13430 : 370.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35675 : 269.0) no description available & (gnl|cdd|30414 : 228.0) no description available & (reliability: 740.0) & (original description: Putative dmdA, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330;PF00330)' T
'16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf01221_68726-79850' '(at4g13430 : 831.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 506.0) no description available & (gnl|cdd|35675 : 504.0) no description available & (q6yzx6|acoc_orysa : 86.3) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1662.0) & (original description: Putative IIL1, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330;PF00330)' T
'16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf01221_215260-225239' '(at4g13430 : 823.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 508.0) no description available & (gnl|cdd|35675 : 486.0) no description available & (q6yzx6|acoc_orysa : 85.9) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1646.0) & (original description: Putative dmdA, Description = 2,3-dimethylmalate dehydratase large subunit, PFAM = PF00330)' T
'16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf08088_294786-306666' '(at4g13430 : 868.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 524.0) no description available & (gnl|cdd|35675 : 523.0) no description available & (q6yzx6|acoc_orysa : 82.0) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1736.0) & (original description: Putative IIL1, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330)' T
'16.5.1.1.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase small subunit (MAM-IS)' 'nbv0.3scaffold1013_3275-6048' '(at2g43090 : 276.0) Aconitase/3-isopropylmalate dehydratase protein; FUNCTIONS IN: hydro-lyase activity, 3-isopropylmalate dehydratase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-isopropylmalate dehydratase, small subunit-like (InterPro:IPR012305), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928); BEST Arabidopsis thaliana protein match is: isopropylmalate isomerase 1 (TAIR:AT3G58990.1). & (gnl|cdd|35675 : 248.0) no description available & (gnl|cdd|80669 : 141.0) no description available & (reliability: 506.0) & (original description: Putative dmdB, Description = 3-isopropylmalate dehydratase, small subunit, PFAM = PF00694)' T
'16.5.1.1.1.5' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate dehydrogenase (MAM-D)' 'niben044scf00024661ctg003_3997-12266' '(at1g80560 : 599.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 588.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|36005 : 538.0) no description available & (gnl|cdd|80743 : 535.0) no description available & (reliability: 1198.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T
'16.5.1.1.1.5' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate dehydrogenase (MAM-D)' 'niben101scf01899_760268-770046' '(at1g80560 : 627.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 617.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|80743 : 541.0) no description available & (gnl|cdd|36005 : 537.0) no description available & (reliability: 1254.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T
'16.5.1.1.1.6' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.CYP79F1/F2 monooxygenase' '' ''
'16.5.1.1.1.7' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.CYP83A1 phenylacetaldoxime monooxygenase' '' ''
'16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 338.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 454.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 338.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 292.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T
'16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 428.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 516.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 560.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T
'16.5.1.1.1.10' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.flavin-containing monooxygenase' 'niben101scf15515_98910-104697' '(at1g12140 : 419.0) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates; flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink). & (gnl|cdd|36613 : 383.0) no description available & (gnl|cdd|84997 : 149.0) no description available & (reliability: 838.0) & (original description: Putative FMO3, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T
'16.5.1.1.1.11' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.glucosinolate 2-oxoglutarate-dependent dioxygenase (AOP)' '' ''
'16.5.1.1.1.12' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.benzoate-CoA ligase' 'niben101scf04020_67046-71181' '(gnl|cdd|82505 : 738.0) no description available & (at1g65880 : 672.0) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.; benzoyloxyglucosinolate 1 (BZO1); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 76758 Blast hits to 70084 proteins in 3572 species: Archae - 1128; Bacteria - 49908; Metazoa - 3256; Fungi - 3775; Plants - 2105; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink). & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 137.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1344.0) & (original description: Putative AAE20, Description = Benzoate--CoA ligase, peroxisomal, PFAM = PF13193;PF00501)' T
'16.5.1.1.1.12' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.benzoate-CoA ligase' 'niben101scf04020_275533-279903' '(gnl|cdd|82505 : 734.0) no description available & (at1g66120 : 662.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 78414 Blast hits to 71735 proteins in 3650 species: Archae - 1135; Bacteria - 51527; Metazoa - 3303; Fungi - 3365; Plants - 2332; Viruses - 1; Other Eukaryotes - 16751 (source: NCBI BLink). & (gnl|cdd|36391 : 516.0) no description available & (q42982|4cl2_orysa : 143.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative AAE, Description = Acyl-activating enzyme-like protein, PFAM = PF00501;PF13193)' T
'16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 246.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T
'16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 672.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 776.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T
'16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.5.1.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic' '' ''
'16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 354.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 498.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 312.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 990.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T
'16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 346.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole' '' ''
'16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 342.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 464.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 314.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 952.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T
'16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 324.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 342.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 310.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 958.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T
'16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 334.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T
'16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 438.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T
'16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 556.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T
'16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'nbv0.3scaffold58668_6674-10668' '(gnl|cdd|35378 : 476.0) no description available & (at4g37370 : 470.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (q43068|c82a1_pea : 302.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 890.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf02427_28989-32949' '(at4g37370 : 469.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 304.0) no description available & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 882.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf04995_1183312-1187744' '(gnl|cdd|35378 : 433.0) no description available & (at4g37320 : 423.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|84486 : 281.0) no description available & (q43068|c82a1_pea : 280.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 788.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf07242_744099-749608' '(at4g37370 : 483.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 461.0) no description available & (q43068|c82a1_pea : 310.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 278.0) no description available & (reliability: 912.0) & (original description: Putative CYP81F3, Description = Cytochrome P450 81F3, PFAM = PF00067)' T
'16.5.1.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared' '' ''
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 620.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf01813_145590-149660' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 326.0) no description available & (reliability: 654.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf01813_145620-149681' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 325.0) no description available & (reliability: 654.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf03193_18703-23405' '(o81974|c71d8_soybn : 503.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26300 : 363.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 296.0) no description available & (reliability: 654.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf13221_34103-38399' '(gnl|cdd|35378 : 505.0) no description available & (at4g31500 : 495.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 441.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 327.0) no description available & (reliability: 990.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf17594_56137-60331' '(gnl|cdd|35378 : 504.0) no description available & (at4g31500 : 472.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 419.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 321.0) no description available & (reliability: 944.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 942.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 660.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 962.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1022.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T
'16.5.1.1.4.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.UDP-glycosyltransferase' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 324.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.5.1.1.4.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.UDP-glycosyltransferase' 'niben101scf00661_14430-20858' '(at1g24100 : 469.0) Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis; UDP-glucosyl transferase 74B1 (UGT74B1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 7754 Blast hits to 7677 proteins in 493 species: Archae - 0; Bacteria - 488; Metazoa - 2030; Fungi - 39; Plants - 5027; Viruses - 105; Other Eukaryotes - 65 (source: NCBI BLink). & (q41819|iaag_maize : 334.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 938.0) & (original description: Putative UGT74B1, Description = UDP-glycosyltransferase 74B1, PFAM = PF00201)' T
'16.5.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.regulation' '' ''
'16.5.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aliphatic' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aliphatic' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.2' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aromatic' '' ''
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold5927_521-3411' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 214.0) & (original description: Putative DOF5, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold22028_9440-12015' '(q7xbh4|myb4_orysa : 154.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 152.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 152.0) no description available & (reliability: 278.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold22028_9473-12135' '(at4g21440 : 151.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 147.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 146.0) no description available & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold60842_6132-8938' '(at5g60850 : 115.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold86968_132-3494' '(p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at3g13540 : 196.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (gnl|cdd|35271 : 182.0) no description available & (reliability: 368.0) & (original description: Putative MYB8, Description = Putative R2R3 MYB protein 8, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.5scaffold39_1180153-1183515' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 366.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00000296ctg019_24089-26531' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00005477ctg013_1-2414' '(gnl|cdd|66392 : 109.0) no description available & (at5g62940 : 93.2) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 173.4) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf00797_108675-112037' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 364.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf03551_16059-19024' '(gnl|cdd|66392 : 122.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf03965_367740-371126' '(p10290|mybc_maize : 195.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 193.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (reliability: 368.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf04384_516837-519685' '(gnl|cdd|66392 : 110.0) no description available & (at5g60200 : 106.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative Dof6, Description = Dof6 transcription factor, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf04410_315585-318550' '(gnl|cdd|66392 : 124.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf05998_168194-172107' '(at1g34670 : 201.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (p20026|myb1_horvu : 186.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 366.0) & (original description: Putative myb27, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf06793_770279-773169' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 214.0) & (original description: Putative Dof7, Description = Dof protein, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf08791_35996-38844' '(gnl|cdd|66392 : 110.0) no description available & (at5g62940 : 93.6) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 175.6) & (original description: Putative dag, Description = Dof protein, PFAM = PF02701)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf09760_25126-77859' '(q7xbh4|myb4_orysa : 151.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf34895_33028-36169' '(at3g23250 : 174.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'16.5.1.2.4' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.shared' '' ''
'16.5.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation' '' ''
'16.5.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.myrosinase' '' ''
'16.5.1.3.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.myrosinase.TGG' '' ''
'16.5.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilespecifier protein' '' ''
'16.5.1.3.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilespecifier protein.epithiospecifier protein' '' ''
'16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 336.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'niben101scf03941_215174-233543' '(q42965|nrl4_tobac : 655.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (at5g22300 : 561.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|36023 : 535.0) no description available & (gnl|cdd|85033 : 167.0) no description available & (reliability: 1122.0) & (original description: Putative NIT4A, Description = Bifunctional nitrilase/nitrile hydratase NIT4A, PFAM = PF00795)' T
'16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 372.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'16.5.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.transport' '' ''
'16.5.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.transport.aliphatic' 'niben101scf01729_39830-46983' '(at4g22840 : 436.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37929 : 213.0) no description available & (gnl|cdd|30734 : 155.0) no description available & (reliability: 850.0) & (original description: Putative BASS5, Description = Probable sodium/metabolite cotransporter BASS5, chloroplastic, PFAM = PF01758)' T
'16.5.99' 'secondary metabolism.sulfur-containing.misc' '' ''
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold26602_1291-9061' '(gnl|cdd|68439 : 470.0) no description available & (at4g24670 : 452.0) Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.; tryptophan aminotransferase related 2 (TAR2); FUNCTIONS IN: L-tryptophan:2-oxoglutarate aminotransferase activity, carbon-sulfur lyase activity, L-tryptophan:pyruvate aminotransferase activity; INVOLVED IN: in 12 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative TAR2, Description = Tryptophan aminotransferase-related protein 2, PFAM = PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold96610_425-2718' '(at1g34060 : 206.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68439 : 143.0) no description available & (reliability: 412.0) & (original description: Putative ALL1, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04864;PF04863)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold96610_624-4330' '(gnl|cdd|68439 : 229.0) no description available & (at1g34060 : 206.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative ALL1, Description = Alliinase, PFAM = PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf00650_171507-177196' '(gnl|cdd|68439 : 468.0) no description available & (at1g70560 : 450.0) TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.; tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 900.0) & (original description: Putative TAA1, Description = L-tryptophan--pyruvate aminotransferase 1, PFAM = PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf01578_577467-588190' '(gnl|cdd|68439 : 417.0) no description available & (at1g34040 : 416.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34060.1); Has 290 Blast hits to 290 proteins in 68 species: Archae - 8; Bacteria - 67; Metazoa - 0; Fungi - 6; Plants - 199; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative TAR4, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04864;PF04863)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf04641_270181-276509' '(at1g34060 : 500.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68439 : 464.0) no description available & (reliability: 1000.0) & (original description: Putative TAR4, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04863;PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf04641_272604-276310' '(gnl|cdd|68439 : 240.0) no description available & (at1g34060 : 221.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ALL1, Description = Alliinase, PFAM = PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf07793_263563-273535' '(gnl|cdd|68439 : 470.0) no description available & (at4g24670 : 454.0) Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.; tryptophan aminotransferase related 2 (TAR2); FUNCTIONS IN: L-tryptophan:2-oxoglutarate aminotransferase activity, carbon-sulfur lyase activity, L-tryptophan:pyruvate aminotransferase activity; INVOLVED IN: in 12 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative TAR2, Description = Tryptophan aminotransferase-related protein 2, PFAM = PF04864)' T
'16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf10162_228826-235029' '(gnl|cdd|68439 : 467.0) no description available & (at1g70560 : 452.0) TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.; tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative TAA1, Description = L-tryptophan--pyruvate aminotransferase 1, PFAM = PF04864)' T
'16.7' 'secondary metabolism.wax' 'nbv0.3scaffold21854_25143-30319' '(at1g67730 : 446.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 285.0) no description available & (gnl|cdd|30648 : 183.0) no description available & (reliability: 892.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T
'16.7' 'secondary metabolism.wax' 'nbv0.3scaffold37035_2137-5959' '(at1g02205 : 372.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 744.0) & (original description: Putative CER1, Description = Protein WAX2, PFAM = PF12076)' T
'16.7' 'secondary metabolism.wax' 'nbv0.3scaffold57354_3762-7625' '(at5g57800 : 328.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative gl1, Description = Protein WAX2, PFAM = PF04116)' T
'16.7' 'secondary metabolism.wax' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 854.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'nbv0.5scaffold2673_86214-96400' '(at1g02205 : 771.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1542.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben044scf00000319ctg001_1-3255' '(at1g19440 : 932.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 548.0) no description available & (reliability: 1864.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben044scf00000506ctg010_3073-13501' '(at1g02205 : 562.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1124.0) & (original description: Putative BnaC03g20880D, Description = BnaC03g20880D protein, PFAM = PF12076;PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben044scf00011365ctg005_4159-7908' '(at5g57800 : 288.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative gl1, Description = Protein WAX2, PFAM = PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben044scf00044912ctg007_1-9678' '(at1g04220 : 642.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 441.0) no description available & (reliability: 1164.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf00046_693940-703693' '(at1g67730 : 454.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 279.0) no description available & (gnl|cdd|30648 : 178.0) no description available & (reliability: 908.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T
'16.7' 'secondary metabolism.wax' 'niben101scf00753_313928-319183' '(at1g68530 : 781.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 481.0) no description available & (reliability: 1562.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf00753_326309-329038' '(at1g68530 : 816.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 494.0) no description available & (reliability: 1632.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf01211_441047-453581' '(at1g02205 : 740.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1480.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf02156_6261-16830' '(at1g68530 : 907.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 509.0) no description available & (reliability: 1814.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf02240_496777-503637' '(at1g02205 : 782.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1564.0) & (original description: Putative Sb04g036940, Description = Putative uncharacterized protein Sb04g036940, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf02955_633262-636620' '(at1g68530 : 453.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 392.0) no description available & (reliability: 906.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf03045_40756-52984' '(at1g67730 : 337.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 266.0) no description available & (gnl|cdd|30648 : 168.0) no description available & (reliability: 674.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T
'16.7' 'secondary metabolism.wax' 'niben101scf03107_171716-174768' '(at3g51970 : 229.0) acyl-CoA sterol acyl transferase 1 (ASAT1); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 801 Blast hits to 791 proteins in 235 species: Archae - 0; Bacteria - 473; Metazoa - 0; Fungi - 36; Plants - 238; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative AT3, Description = Acyltransferase, putative, PFAM = PF13813)' T
'16.7' 'secondary metabolism.wax' 'niben101scf03437_133378-141029' '(at5g57800 : 857.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1714.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf03953_75385-78938' '(at1g19440 : 854.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 529.0) no description available & (reliability: 1708.0) & (original description: Putative KCS16, Description = 3-ketoacyl-CoA synthase 16, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf04063_10208-31310' '(at1g24470 : 348.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 2 (KCR2); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 1 (TAIR:AT1G67730.1); Has 80088 Blast hits to 80001 proteins in 3265 species: Archae - 726; Bacteria - 55481; Metazoa - 4714; Fungi - 3206; Plants - 2039; Viruses - 0; Other Eukaryotes - 13922 (source: NCBI BLink). & (gnl|cdd|36232 : 239.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 646.0) & (original description: Putative KCR2, Description = Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470, PFAM = PF00106)' T
'16.7' 'secondary metabolism.wax' 'niben101scf04082_46852-50926' '(at1g04220 : 640.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 438.0) no description available & (reliability: 1174.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf04113_1271115-1274662' '(at1g19440 : 932.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 548.0) no description available & (reliability: 1864.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf04301_280718-313074' '(at1g02205 : 777.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1554.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf04655_517658-521205' '(at1g19440 : 907.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 525.0) no description available & (reliability: 1814.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf05109_53374-63275' '(at5g57800 : 829.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1658.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF12076;PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben101scf06371_20238-35436' '(at5g57800 : 489.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative CER3, Description = Protein WAX2, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf08128_12522-20365' '(at1g02205 : 720.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1440.0) & (original description: Putative At2g37700, Description = Protein CER1-like 2, PFAM = PF04116;PF12076)' T
'16.7' 'secondary metabolism.wax' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 816.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 844.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf08470_28730-32608' '(at1g04220 : 613.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 433.0) no description available & (reliability: 1112.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 720.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf10780_9827-13615' '(at1g68530 : 893.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 498.0) no description available & (reliability: 1786.0) & (original description: Putative CUT1, Description = 3-ketoacyl-CoA synthase 6, PFAM = PF08392;PF08541)' T
'16.7' 'secondary metabolism.wax' 'niben101scf10780_10208-12903' '(gnl|cdd|87517 : 374.0) no description available & (at1g68530 : 370.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392)' T
'16.7' 'secondary metabolism.wax' 'niben101scf17024_26306-37896' '(at1g02205 : 738.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1476.0) & (original description: Putative CER1, Description = Protein WAX2, PFAM = PF12076;PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben101scf17380_3130-11353' '(at1g02205 : 682.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1364.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF12076;PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben101scf22589_39149-56209' '(at5g57800 : 887.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1774.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF12076;PF04116)' T
'16.7' 'secondary metabolism.wax' 'niben101scf28488_1747-4802' '(at3g51970 : 253.0) acyl-CoA sterol acyl transferase 1 (ASAT1); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 801 Blast hits to 791 proteins in 235 species: Archae - 0; Bacteria - 473; Metazoa - 0; Fungi - 36; Plants - 238; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ASAT1, Description = Acyl-CoA--sterol O-acyltransferase 1, PFAM = PF13813)' T
'16.7.1001' 'secondary metabolism.wax' 'pentadecane' 'secondary metabolism, waxes' M
'16.8' 'secondary metabolism.flavonoids' '' ''
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 280.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 882.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold2034_18323-21310' '(q43716|ufog_pethy : 452.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54060 : 154.0) UDP-glucose:flavonoid 3-o-glucosyltransferase (UF3GT); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, response to sucrose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G54010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative GTR1, Description = Glucosyl-transferase, PFAM = )' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold2660_12923-16449' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 214.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 173.0) no description available & (gnl|cdd|32004 : 95.9) no description available & (reliability: 400.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold8936_6060-8424' '(at2g22590 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 108.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 92.7) no description available & (reliability: 314.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 360.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00024963ctg007_9728-15569' '(at5g05600 : 493.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 352.0) no description available & (p51091|ldox_maldo : 220.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 986.0) & (original description: Putative fls2, Description = Flavonol synthase 2, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00028622ctg003_3721-7247' '(at5g49690 : 230.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 216.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 92.0) no description available & (reliability: 416.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00048655ctg006_13616-15094' '(at2g22590 : 100.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400000059, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 628.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00173_639793-643259' '(at5g49690 : 467.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 270.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 175.0) no description available & (gnl|cdd|32004 : 91.3) no description available & (reliability: 914.0) & (original description: Putative UGT91D1, Description = UDP-glycosyltransferase 91D1, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00348_1055793-1059187' '(at5g01210 : 600.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 304.0) no description available & (o24645|hcbt1_diaca : 104.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1130.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00561_15643-22376' '(at2g22590 : 454.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 225.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 908.0) & (original description: Putative upa11, Description = Putative anthocyanidine rhamnosyl-transferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00571_706171-710265' '(at1g55290 : 498.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 287.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 185.0) no description available & (reliability: 996.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00902_625380-632032' '(at2g39980 : 639.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 319.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1278.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01227_356839-359438' '(at2g39980 : 239.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 157.0) no description available & (reliability: 478.0) & (original description: Putative AT3, Description = HXXXD-type acyl-transferase family protein, PFAM = PF02458)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01383_776990-781565' '(at3g13610 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (o04847|dv4h_catro : 155.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 722.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01383_913368-923370' '(at1g55290 : 348.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (q41452|fls_soltu : 167.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 696.0) & (original description: Putative BnaC02g04300D, Description = BnaC02g04300D protein, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01834_526259-531246' '(at5g65550 : 183.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 177.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 80.0) no description available & (reliability: 332.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02034_521008-528748' '(at5g05600 : 503.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 360.0) no description available & (p51091|ldox_maldo : 226.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 178.0) no description available & (reliability: 1006.0) & (original description: Putative FLS, Description = Flavonol synthase, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02085_1410883-1415996' '(at3g55970 : 457.0) jasmonate-regulated gene 21 (JRG21); FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8809 Blast hits to 8750 proteins in 1005 species: Archae - 0; Bacteria - 1115; Metazoa - 109; Fungi - 1073; Plants - 4993; Viruses - 0; Other Eukaryotes - 1519 (source: NCBI BLink). & (gnl|cdd|35365 : 355.0) no description available & (p51091|ldox_maldo : 246.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 175.0) no description available & (reliability: 914.0) & (original description: Putative OXR1, Description = Oxidoreductase, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 624.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02280_596612-600021' '(at2g39980 : 632.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 328.0) no description available & (o24645|hcbt1_diaca : 96.7) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1264.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02294_200653-204056' '(at5g49690 : 340.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 210.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 154.0) no description available & (gnl|cdd|79510 : 80.4) no description available & (reliability: 676.0) & (original description: Putative UGT91M1, Description = UDP-glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 276.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02399_206049-209452' '(at2g22590 : 491.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 220.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 170.0) no description available & (gnl|cdd|32004 : 92.4) no description available & (reliability: 982.0) & (original description: Putative UGT91A1, Description = UDP-glycosyltransferase 91A1, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02500_89803-94725' '(at1g55290 : 298.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 190.0) no description available & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 125.0) no description available & (reliability: 596.0) & (original description: Putative Diox2, Description = Leucoanthocyanidin dioxygenase, putative, PFAM = PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1039041-1042438' '(at2g22590 : 509.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 233.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 172.0) no description available & (gnl|cdd|79510 : 94.2) no description available & (reliability: 1018.0) & (original description: Putative UGT91A1, Description = UDP-glycosyltransferase 91A1, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1534900-1538343' '(at5g65550 : 478.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 238.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 191.0) no description available & (gnl|cdd|79510 : 99.6) no description available & (reliability: 942.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1547854-1549890' '(at2g22590 : 259.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 137.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 111.0) no description available & (gnl|cdd|79510 : 91.2) no description available & (reliability: 518.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 880.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 272.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03779_388149-393543' '(at5g05600 : 486.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 348.0) no description available & (p51091|ldox_maldo : 229.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 166.0) no description available & (reliability: 972.0) & (original description: Putative fls2, Description = Flavonol synthase 2, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04118_391216-395681' '(at3g13610 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04847|dv4h_catro : 189.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 944.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 258.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04742_203399-208840' '(at1g55290 : 356.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 274.0) no description available & (q41452|fls_soltu : 163.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 712.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04871_603755-607182' '(at5g49690 : 319.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 208.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 624.0) & (original description: Putative UGT91Q1, Description = UDP-glycosyltransferase 91Q1, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04871_712186-715589' '(at5g49690 : 292.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 172.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (reliability: 568.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 278.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf07241_34095-37486' '(at2g22590 : 310.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 155.0) no description available & (reliability: 620.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 278.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf10502_68689-72582' '(at1g55290 : 453.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 284.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 906.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 236.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf11705_1746-6350' '(at5g05600 : 434.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 346.0) no description available & (p51091|ldox_maldo : 230.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 868.0) & (original description: Putative OXR1, Description = Oxidoreductase, PFAM = PF14226;PF03171)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf11705_186084-190697' '(at2g38240 : 449.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8819 Blast hits to 8740 proteins in 1012 species: Archae - 0; Bacteria - 1137; Metazoa - 112; Fungi - 1067; Plants - 5036; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 353.0) no description available & (p51091|ldox_maldo : 261.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 174.0) no description available & (reliability: 898.0) & (original description: Putative ANS, Description = Leucoanthocyanidin dioxygenase, PFAM = PF03171;PF14226)' T
'16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf22015_169431-209731' '(at5g49690 : 250.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 114.0) no description available & (reliability: 482.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T
'16.8.1.1' 'secondary metabolism.flavonoids.anthocyanins.leucocyanidin dioxygenase' '' ''
'16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 324.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf00817_385825-398191' '(gnl|cdd|36715 : 227.0) no description available & (at4g27250 : 176.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (p14720|dfra_pethy : 163.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 89.3) no description available & (reliability: 324.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf03694_107501-112320' '(at1g61720 : 395.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (gnl|cdd|36715 : 327.0) no description available & (p51110|dfra_vitvi : 277.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 118.0) no description available & (reliability: 790.0) & (original description: Putative ban, Description = Anthocyanidin reductase, PFAM = PF01370)' T
'16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf08321_217955-237076' '(gnl|cdd|36715 : 219.0) no description available & (at1g61720 : 157.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (p14720|dfra_pethy : 153.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 91.2) no description available & (reliability: 314.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.1.10' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-methyltransferase' '' ''
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 304.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold2660_12923-16449' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 214.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 173.0) no description available & (gnl|cdd|32004 : 95.9) no description available & (reliability: 444.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold8936_6060-8424' '(at2g22590 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 108.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 92.7) no description available & (reliability: 294.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00000867ctg025_743-4116' '(at5g49690 : 163.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 129.0) no description available & (p56725|zox_phavu : 119.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 326.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00002317ctg006_11986-15758' '(at5g49690 : 543.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 248.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 192.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 1086.0) & (original description: Putative UGT91C1, Description = UDP-glycosyltransferase 91C1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00004370ctg009_8007-10858' '(at5g65550 : 179.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (q43716|ufog_pethy : 147.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 82.4) no description available & (reliability: 358.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 412.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 374.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00028492ctg004_10894-14427' '(at5g49690 : 214.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 202.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 85.9) no description available & (reliability: 428.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00028622ctg003_3721-7247' '(at5g49690 : 230.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 216.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 92.0) no description available & (reliability: 460.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00048655ctg006_13616-15094' '(at2g22590 : 100.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400000059, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00077_916279-993057' '(at5g65550 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 162.0) no description available & (q43716|ufog_pethy : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 81.3) no description available & (reliability: 372.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00173_639793-643259' '(at5g49690 : 467.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 270.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 175.0) no description available & (gnl|cdd|32004 : 91.3) no description available & (reliability: 934.0) & (original description: Putative UGT91D1, Description = UDP-glycosyltransferase 91D1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00539_233406-236779' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 195.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|32004 : 94.3) no description available & (reliability: 444.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01124_2409012-2412373' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 181.0) no description available & (q43716|ufog_pethy : 180.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 86.9) no description available & (reliability: 412.0) & (original description: Putative CsUGT134, Description = UDP-glycosyltransferase 94P1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01395_65319-68734' '(at5g49690 : 543.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 246.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 190.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 1086.0) & (original description: Putative UGT91C1, Description = UDP-glycosyltransferase 91C1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 410.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01834_526259-531246' '(at5g65550 : 183.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 177.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 80.0) no description available & (reliability: 366.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf02294_200653-204056' '(at5g49690 : 340.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 210.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 154.0) no description available & (gnl|cdd|79510 : 80.4) no description available & (reliability: 680.0) & (original description: Putative UGT91M1, Description = UDP-glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf02752_1027658-1031004' '(at5g65550 : 216.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 173.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 86.1) no description available & (reliability: 432.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf03108_1534900-1538343' '(at5g65550 : 478.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 238.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 191.0) no description available & (gnl|cdd|79510 : 99.6) no description available & (reliability: 956.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf03438_284329-287675' '(at5g65550 : 184.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 161.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 368.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf04871_603755-607182' '(at5g49690 : 319.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 208.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 638.0) & (original description: Putative UGT91Q1, Description = UDP-glycosyltransferase 91Q1, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf04871_712186-715589' '(at5g49690 : 292.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 172.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (reliability: 584.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf06846_455173-458501' '(at5g49690 : 225.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 194.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 186.0) no description available & (gnl|cdd|79510 : 87.3) no description available & (reliability: 450.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf07241_34095-37486' '(at2g22590 : 310.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 155.0) no description available & (reliability: 586.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 302.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 314.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf17612_266218-269591' '(at5g49690 : 245.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 226.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 89.7) no description available & (reliability: 490.0) & (original description: Putative C12RT1, Description = Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase, PFAM = PF00201)' T
'16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf22015_169431-209731' '(at5g49690 : 250.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 114.0) no description available & (reliability: 500.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T
'16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben044scf00061802ctg001_167-3620' '(at5g39090 : 233.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2059 Blast hits to 2043 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 23; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66174 : 154.0) no description available & (reliability: 466.0) & (original description: Putative mat1, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T
'16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf00905_179725-182480' '(at1g03495 : 141.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03940.1); Has 1920 Blast hits to 1905 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1900; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative mat1, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T
'16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf02869_1043504-1046859' '(at1g03940 : 239.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 154.0) no description available & (reliability: 478.0) & (original description: Putative mat1, Description = Malonyltransferase, PFAM = PF02458)' T
'16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf15007_45229-48590' '(at5g39090 : 231.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2059 Blast hits to 2043 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 23; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66174 : 149.0) no description available & (reliability: 462.0) & (original description: Putative mat1, Description = Malonyltransferase, PFAM = PF02458)' T
'16.8.1.1001' 'secondary metabolism.flavonoids.anthocyanins' 'lycopine' 'secondary metabolism, anthocyanin' M
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'nbv0.3scaffold9474_41108-44591' '(at1g02050 : 579.0) LESS ADHESIVE POLLEN 6 (LAP6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G00040.1); Has 6482 Blast hits to 6477 proteins in 1606 species: Archae - 0; Bacteria - 2500; Metazoa - 0; Fungi - 67; Plants - 3666; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|29418 : 358.0) no description available & (p06515|chsy_antma : 295.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1158.0) & (original description: Putative PKSA, Description = Type III polyketide synthase A, PFAM = PF00195;PF02797)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'nbv0.5scaffold2239_293929-298014' '(at5g05270 : 238.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66148 : 97.3) no description available & (reliability: 476.0) & (original description: Putative CHI2, Description = Chalcone-flavonone isomerase family protein, PFAM = PF02431)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf00135_37426-42390' '(at4g34850 : 649.0) LESS ADHESIVE POLLEN 5 (LAP5); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, anther, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29418 : 364.0) no description available & (q43188|chs2_soltu : 324.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (reliability: 1298.0) & (original description: Putative PKSB, Description = Type III polyketide synthase B, PFAM = PF00195;PF02797)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf00586_42581-54795' '(at2g37790 : 512.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink). & (gnl|cdd|36790 : 391.0) no description available & (gnl|cdd|84642 : 313.0) no description available & (q7g764|nado1_orysa : 253.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf01983_150023-156094' '(at1g53520 : 271.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative FAP3, Description = Fatty-acid-binding protein 3, chloroplastic, PFAM = PF02431)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04082_218632-228946' '(q7g764|nado1_orysa : 333.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (at1g59960 : 331.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (gnl|cdd|36790 : 318.0) no description available & (gnl|cdd|84642 : 302.0) no description available & (reliability: 662.0) & (original description: Putative cor, Description = Putative NAD(P)H-dependent oxidoreductase 1, PFAM = PF00248)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04563_76533-84707' '(gnl|cdd|36790 : 314.0) no description available & (at1g59960 : 306.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (q7g764|nado1_orysa : 305.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (gnl|cdd|84642 : 291.0) no description available & (reliability: 612.0) & (original description: Putative GALUR, Description = D-galacturonate reductase, PFAM = PF00248)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04741_485629-489748' '(at1g53520 : 273.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative chi3, Description = Chalcone-flavonone isomerase family protein, PFAM = PF02431)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf09575_186657-189932' '(at1g02050 : 572.0) LESS ADHESIVE POLLEN 6 (LAP6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G00040.1); Has 6482 Blast hits to 6477 proteins in 1606 species: Archae - 0; Bacteria - 2500; Metazoa - 0; Fungi - 67; Plants - 3666; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|29418 : 357.0) no description available & (p06515|chsy_antma : 292.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1144.0) & (original description: Putative PKSA, Description = Type III polyketide synthase A, PFAM = PF02797;PF00195)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf09597_5814-9380' '(gnl|cdd|36790 : 197.0) no description available & (gnl|cdd|84642 : 188.0) no description available & (at1g59960 : 187.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (p26690|6dcs_soybn : 184.0) NAD(P)H-dependent 6'-deoxychalcone synthase (EC 2.3.1.170) - Glycine max (Soybean) & (reliability: 374.0) & (original description: Putative cor, Description = Putative NAD(P)H-dependent oxidoreductase 1, PFAM = PF00248)' T
'16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf23113_65709-69794' '(at5g05270 : 238.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66148 : 97.3) no description available & (reliability: 476.0) & (original description: Putative CHI3, Description = Probable chalcone--flavonone isomerase 3, PFAM = PF02431)' T
'16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben044scf00007558ctg003_2660-6405' '(q43188|chs2_soltu : 773.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (at5g13930 : 691.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 467.0) no description available & (reliability: 1382.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF00195;PF02797)' T
'16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf00536_1517591-1521675' '(p08894|chsa_pethy : 746.0) Chalcone synthase A (EC 2.3.1.74) (Naringenin-chalcone synthase A) - Petunia hybrida (Petunia) & (at5g13930 : 668.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 470.0) no description available & (reliability: 1336.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF00195;PF02797)' T
'16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf01146_1303849-1307906' '(q43188|chs2_soltu : 777.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (at5g13930 : 691.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 469.0) no description available & (reliability: 1382.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF02797;PF00195)' T
'16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf09590_219517-223866' '(p22927|chsg_pethy : 565.0) Chalcone synthase G (EC 2.3.1.74) (Naringenin-chalcone synthase G) - Petunia hybrida (Petunia) & (at5g13930 : 512.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 412.0) no description available & (reliability: 1024.0) & (original description: Putative CHSG, Description = Chalcone synthase G, PFAM = PF00195;PF02797)' T
'16.8.2.2' 'secondary metabolism.flavonoids.chalcones.chalcone isomerase' 'niben101scf01916_150514-155689' '(gnl|cdd|66148 : 338.0) no description available & (p11650|cfia_pethy : 331.0) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone isomerase A) - Petunia hybrida (Petunia) & (at3g55120 : 245.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative CHI, Description = Chalcone--flavonone isomerase, PFAM = PF02431)' T
'16.8.2.2' 'secondary metabolism.flavonoids.chalcones.chalcone isomerase' 'niben101scf05989_129551-134272' '(gnl|cdd|66148 : 340.0) no description available & (p11650|cfia_pethy : 331.0) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone isomerase A) - Petunia hybrida (Petunia) & (at3g55120 : 253.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative CHI, Description = Chalcone--flavonone isomerase, PFAM = PF02431)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold6606_39668-46306' '(gnl|cdd|35365 : 241.0) no description available & (at4g10490 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (gnl|cdd|33294 : 163.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 334.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold11861_40425-45398' '(gnl|cdd|35365 : 244.0) no description available & (at5g24530 : 227.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41452|fls_soltu : 186.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 154.0) no description available & (reliability: 454.0) & (original description: Putative F3H, Description = F3H-like protein, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold12564_428-3600' '(at4g33360 : 233.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (reliability: 466.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = )' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 824.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 758.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 228.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold273_549474-552378' '(p56725|zox_phavu : 120.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g36770 : 87.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72E1 (TAIR:AT3G50740.1); Has 8229 Blast hits to 8179 proteins in 484 species: Archae - 0; Bacteria - 520; Metazoa - 2565; Fungi - 32; Plants - 4963; Viruses - 88; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 84.6) no description available & (reliability: 168.6) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold1760_72749-78530' '(at4g33360 : 466.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 216.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 932.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold2034_18323-21310' '(q43716|ufog_pethy : 452.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54060 : 154.0) UDP-glucose:flavonoid 3-o-glucosyltransferase (UF3GT); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, response to sucrose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G54010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative GTR1, Description = Glucosyl-transferase, PFAM = )' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 314.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold5797_96612-108152' '(at4g16330 : 412.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 308.0) no description available & (q07512|fls_pethy : 204.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 824.0) & (original description: Putative F3H, Description = Flavanone-3-hydroxylase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00003526ctg006_158-2283' '(at4g16330 : 141.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 123.0) no description available & (q05964|fl3h_diaca : 90.1) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 86.1) no description available & (reliability: 282.0) & (original description: Putative F3H, Description = Flavanone 3-hydroxylase, PFAM = PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00010150ctg016_8418-14556' '(gnl|cdd|35365 : 275.0) no description available & (at2g36690 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 180.0) no description available & (p51091|ldox_maldo : 154.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 404.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 356.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00021540ctg000_49997-55189' '(at4g33360 : 389.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 205.0) no description available & (gnl|cdd|30800 : 128.0) no description available & (reliability: 778.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 802.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00024329ctg002_10796-15193' '(at4g33360 : 240.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 155.0) no description available & (gnl|cdd|30800 : 102.0) no description available & (reliability: 480.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00033957ctg002_12343-17131' '(at4g25300 : 298.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 225.0) no description available & (gnl|cdd|33294 : 132.0) no description available & (o04705|gao1d_wheat : 122.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 574.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 684.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 650.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00219_103101-108882' '(at4g33360 : 454.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 209.0) no description available & (gnl|cdd|30800 : 130.0) no description available & (reliability: 908.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00225_15112-32735' '(at5g24530 : 490.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 330.0) no description available & (q06942|fl3h_maldo : 227.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 980.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 454.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00700_634277-646819' '(at4g16330 : 258.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 197.0) no description available & (q00985|acco1_maldo : 124.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 115.0) no description available & (reliability: 516.0) & (original description: Putative F3H, Description = Flavanone 3-hydroxylase, PFAM = PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00748_37207-40715' '(gnl|cdd|35365 : 270.0) no description available & (at5g24530 : 236.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05964|fl3h_diaca : 172.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 149.0) no description available & (reliability: 472.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00817_587509-592982' '(at4g01070 : 523.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1046.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00817_587801-590444' '(at4g01070 : 200.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (reliability: 400.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = )' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 462.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01076_248890-253656' '(at4g01070 : 582.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 207.0) no description available & (p56725|zox_phavu : 184.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.9) no description available & (reliability: 1164.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01141_772760-777717' '(gnl|cdd|35365 : 244.0) no description available & (at5g24530 : 240.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p41090|fl3h_vitvi : 167.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (gnl|cdd|33294 : 135.0) no description available & (reliability: 480.0) & (original description: Putative Co31, Description = Downy Mildew Resistant 6-like protein, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01239_173564-182758' '(at5g24530 : 506.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 325.0) no description available & (q06942|fl3h_maldo : 227.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 166.0) no description available & (reliability: 1012.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 342.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01559_94486-97253' '(at1g07250 : 402.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.8) no description available & (reliability: 780.0) & (original description: Putative GT3, Description = Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01773_370984-374699' '(at1g68540 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G25460.1). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 198.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 130.0) no description available & (reliability: 806.0) & (original description: Putative TKPR2, Description = Tetraketide alpha-pyrone reductase 2, PFAM = PF01370)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 352.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02107_721920-728118' '(at1g17020 : 331.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 285.0) no description available & (q41452|fls_soltu : 182.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 159.0) no description available & (reliability: 618.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 684.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 498.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 274.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02367_16129-20520' '(at4g33360 : 289.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 90.7) no description available & (reliability: 578.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02565_331187-336246' '(at4g01070 : 597.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 184.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 1194.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 744.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03304_119733-137384' '(at4g16330 : 402.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 301.0) no description available & (p51092|ldox_pethy : 199.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 804.0) & (original description: Putative F3H, Description = Flavanone-3-hydroxylase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 828.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 260.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 306.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 242.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 332.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04932_124212-145824' '(gnl|cdd|35365 : 246.0) no description available & (at5g24530 : 225.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41452|fls_soltu : 183.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 154.0) no description available & (reliability: 450.0) & (original description: Putative Co31, Description = Hyoscyamine 6-dioxygenase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 646.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf06611_70908-86459' '(at4g33360 : 378.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 126.0) no description available & (gnl|cdd|30800 : 93.1) no description available & (reliability: 756.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 348.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07089_278058-281237' '(p56725|zox_phavu : 426.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 196.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 82.7) no description available & (reliability: 368.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07105_411901-415751' '(gnl|cdd|35365 : 248.0) no description available & (at4g10490 : 205.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (q41452|fls_soltu : 158.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 142.0) no description available & (reliability: 410.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 268.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08195_348435-352938' '(at1g17020 : 380.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 301.0) no description available & (o04706|gao1b_wheat : 176.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 726.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 260.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08887_72629-76533' '(gnl|cdd|35365 : 264.0) no description available & (at5g24530 : 194.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p41090|fl3h_vitvi : 145.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (gnl|cdd|33294 : 145.0) no description available & (reliability: 388.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF14226;PF03171)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 314.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 346.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 332.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12205_494417-499205' '(at1g17020 : 359.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04706|gao1b_wheat : 165.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 160.0) no description available & (reliability: 698.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 322.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 854.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 300.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 328.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00305_617826-621503' '(p14720|dfra_pethy : 706.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at5g42800 : 486.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 360.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 972.0) & (original description: Putative ban, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00603_820759-824896' '(gnl|cdd|36715 : 277.0) no description available & (at2g45400 : 241.0) involved in the regulation of brassinosteroid metabolic pathway; BEN1; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, acting on CH-OH group of donors, binding, catalytic activity; INVOLVED IN: regulation of brassinosteroid biosynthetic process, brassinosteroid metabolic process, response to light intensity, flavonoid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 8852 Blast hits to 8839 proteins in 1531 species: Archae - 135; Bacteria - 3285; Metazoa - 357; Fungi - 858; Plants - 2633; Viruses - 7; Other Eukaryotes - 1577 (source: NCBI BLink). & (p51106|dfra_horvu : 207.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Hordeum vulgare (Barley) & (gnl|cdd|30800 : 110.0) no description available & (reliability: 482.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00817_385825-398191' '(gnl|cdd|36715 : 227.0) no description available & (at4g27250 : 176.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (p14720|dfra_pethy : 163.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 89.3) no description available & (reliability: 352.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf06332_72797-83476' '(at4g27250 : 377.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|36715 : 310.0) no description available & (p51104|dfra_diaca : 260.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 129.0) no description available & (reliability: 754.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf08321_217955-237076' '(gnl|cdd|36715 : 219.0) no description available & (at1g61720 : 157.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (p14720|dfra_pethy : 153.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 91.2) no description available & (reliability: 312.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf08508_42594-47161' '(gnl|cdd|36715 : 310.0) no description available & (at2g45400 : 301.0) involved in the regulation of brassinosteroid metabolic pathway; BEN1; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, acting on CH-OH group of donors, binding, catalytic activity; INVOLVED IN: regulation of brassinosteroid biosynthetic process, brassinosteroid metabolic process, response to light intensity, flavonoid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 8852 Blast hits to 8839 proteins in 1531 species: Archae - 135; Bacteria - 3285; Metazoa - 357; Fungi - 858; Plants - 2633; Viruses - 7; Other Eukaryotes - 1577 (source: NCBI BLink). & (p51110|dfra_vitvi : 265.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 131.0) no description available & (reliability: 602.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T
'16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf12011_8924-13302' '(at4g35420 : 508.0) Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production.; dihydroflavonol 4-reductase-like1 (DRL1); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: seed development, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G68540.1); Has 11019 Blast hits to 11006 proteins in 1795 species: Archae - 197; Bacteria - 4697; Metazoa - 293; Fungi - 927; Plants - 2536; Viruses - 49; Other Eukaryotes - 2320 (source: NCBI BLink). & (gnl|cdd|36715 : 361.0) no description available & (p51110|dfra_vitvi : 244.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 123.0) no description available & (reliability: 1016.0) & (original description: Putative TKPR1, Description = Tetraketide alpha-pyrone reductase 1, PFAM = PF01370)' T
'16.8.3.2' 'secondary metabolism.flavonoids.dihydroflavonols.flavanone 3-hydroxylase' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 248.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T
'16.8.3.2' 'secondary metabolism.flavonoids.dihydroflavonols.flavanone 3-hydroxylase' 'niben101scf09345_116049-119649' '(q07353|fl3h_pethy : 662.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (at3g51240 : 607.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (reliability: 1214.0) & (original description: Putative AN3, Description = Naringenin,2-oxoglutarate 3-dioxygenase, PFAM = PF14226;PF03171)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 642.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 742.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold25444_6213-23845' '(q9sbq9|f3ph_pethy : 202.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 170.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 155.0) no description available & (reliability: 340.0) & (original description: Putative F3'H, Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold29896_16689-21532' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 403.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p37120|c75a2_solme : 379.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 806.0) & (original description: Putative cyp07, Description = Cytochrome P450 mono-oxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold50287_1-2247' '(gnl|cdd|35378 : 192.0) no description available & (at3g52970 : 152.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 137.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 116.0) no description available & (reliability: 274.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold53101_9441-14078' '(p48418|c75a1_pethy : 913.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (at5g07990 : 500.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (gnl|cdd|84486 : 363.0) no description available & (reliability: 1000.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold87104_2163-5760' '(gnl|cdd|35378 : 448.0) no description available & (at5g07990 : 390.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 367.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 286.0) no description available & (reliability: 780.0) & (original description: Putative f3h, Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.5scaffold5669_589-3581' '(gnl|cdd|35378 : 139.0) no description available & (at1g01280 : 129.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (q42798|c93a1_soybn : 123.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 81.9) no description available & (reliability: 234.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00001206ctg001_1-2494' '(p48418|c75a1_pethy : 889.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (at5g07990 : 465.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 448.0) no description available & (gnl|cdd|84486 : 341.0) no description available & (reliability: 930.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00002011ctg016_61-2988' '(gnl|cdd|35378 : 229.0) no description available & (at5g07990 : 179.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 172.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 114.0) no description available & (reliability: 358.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00018310ctg006_2187-4954' '(gnl|cdd|35378 : 175.0) no description available & (at3g48300 : 117.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81973|c93a3_soybn : 112.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 97.3) no description available & (reliability: 226.0) & (original description: Putative CYP9, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 672.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00052783ctg002_586-4968' '(at4g12300 : 459.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 430.0) no description available & (gnl|cdd|84486 : 294.0) no description available & (q42798|c93a1_soybn : 290.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 918.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 704.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 658.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00974_125656-133280' '(q9sbq9|f3ph_pethy : 839.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 673.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 485.0) no description available & (gnl|cdd|84486 : 323.0) no description available & (reliability: 1346.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 596.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 728.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_99312-103516' '(gnl|cdd|35378 : 441.0) no description available & (at4g12320 : 419.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 6" (CYP706A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 4 (TAIR:AT4G12300.1); Has 33870 Blast hits to 33549 proteins in 1704 species: Archae - 58; Bacteria - 3712; Metazoa - 11941; Fungi - 7375; Plants - 9569; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (q42798|c93a1_soybn : 266.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 828.0) & (original description: Putative CYP1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_207515-211624' '(gnl|cdd|35378 : 445.0) no description available & (at4g12300 : 443.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (o81973|c93a3_soybn : 296.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 886.0) & (original description: Putative f3'5'h, Description = Flavonoid 3',5'-hydroxylase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_211221-217167' '(at4g12300 : 460.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 441.0) no description available & (q42798|c93a1_soybn : 306.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 298.0) no description available & (reliability: 920.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_220591-224985' '(at4g12300 : 607.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (o81973|c93a3_soybn : 332.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1214.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01748_237083-252034' '(gnl|cdd|35378 : 455.0) no description available & (at5g07990 : 392.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 371.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 784.0) & (original description: Putative cyp07, Description = Cytochrome P450 mono-oxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf02749_118224-122995' '(gnl|cdd|35378 : 479.0) no description available & (at5g07990 : 422.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 396.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 301.0) no description available & (reliability: 844.0) & (original description: Putative CYP75B1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 690.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 740.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf14625_267336-272343' '(p48419|c75a3_pethy : 915.0) Flavonoid 3',5'-hydroxylase 2 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A3) (CYPLXXVA3) - Petunia hybrida (Petunia) & (at5g07990 : 502.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 364.0) no description available & (reliability: 1004.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T
'16.8.3.4' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3',5'-hydroxylase' '' ''
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.3scaffold12564_428-3600' '(at4g33360 : 233.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (reliability: 466.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = )' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 848.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 296.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold1644_83462-88456' '(at3g50210 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 204.0) no description available & (gnl|cdd|33294 : 190.0) no description available & (q41452|fls_soltu : 85.9) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 798.0) & (original description: Putative DIN11, Description = Flavonol synthase-like protein, PFAM = PF14226;PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold1760_72749-78530' '(at4g33360 : 466.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 216.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 932.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold2566_290333-315175' '(at4g25310 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 181.0) no description available & (q8rvf5|gaox2_orysa : 124.0) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (gnl|cdd|33294 : 105.0) no description available & (reliability: 418.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00021540ctg000_49997-55189' '(at4g33360 : 389.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 205.0) no description available & (gnl|cdd|30800 : 128.0) no description available & (reliability: 778.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00024329ctg002_10796-15193' '(at4g33360 : 240.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 155.0) no description available & (gnl|cdd|30800 : 102.0) no description available & (reliability: 480.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00033957ctg002_12343-17131' '(at4g25300 : 298.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 225.0) no description available & (gnl|cdd|33294 : 132.0) no description available & (o04705|gao1d_wheat : 122.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 596.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00043806ctg008_4003-7409' '(at4g25310 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 304.0) no description available & (q07512|fls_pethy : 185.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 762.0) & (original description: Putative DIOX2, Description = Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00043806ctg008_4171-6115' '(at1g17020 : 135.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 109.0) no description available & (reliability: 270.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00054552ctg000_2950-7897' '(at1g17020 : 397.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 324.0) no description available & (q40634|acco1_orysa : 183.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) & (gnl|cdd|33294 : 172.0) no description available & (reliability: 794.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00219_103101-108882' '(at4g33360 : 454.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 209.0) no description available & (gnl|cdd|30800 : 130.0) no description available & (reliability: 908.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 476.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1098.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 434.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf01158_165158-169483' '(at3g21420 : 526.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (gnl|cdd|35365 : 325.0) no description available & (p51091|ldox_maldo : 208.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 182.0) no description available & (reliability: 1052.0) & (original description: Putative EFE, Description = Ethylene-forming enzyme, PFAM = PF14226;PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02107_721920-728118' '(at1g17020 : 331.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 285.0) no description available & (q41452|fls_soltu : 182.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 159.0) no description available & (reliability: 662.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 496.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02367_16129-20520' '(at4g33360 : 289.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 90.7) no description available & (reliability: 578.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 872.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02575_92373-97705' '(at3g50210 : 512.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 263.0) no description available & (gnl|cdd|33294 : 244.0) no description available & (q41452|fls_soltu : 114.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 1024.0) & (original description: Putative At3g50210, Description = Probable 2-oxoglutarate-dependent dioxygenase At3g49630, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 898.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 678.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03446_994486-997943' '(gnl|cdd|35365 : 277.0) no description available & (at2g36690 : 226.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51091|ldox_maldo : 172.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 169.0) no description available & (reliability: 410.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04233_156881-161612' '(at1g17020 : 395.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 321.0) no description available & (q05964|fl3h_diaca : 180.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 171.0) no description available & (reliability: 790.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1076.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04918_654737-658482' '(at5g20400 : 347.0) encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G49390.1); Has 8498 Blast hits to 8450 proteins in 980 species: Archae - 0; Bacteria - 1051; Metazoa - 121; Fungi - 1005; Plants - 4926; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|35365 : 281.0) no description available & (q07512|fls_pethy : 178.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 157.0) no description available & (reliability: 684.0) & (original description: Putative EFE, Description = EFE, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf05135_458342-463461' '(at3g50210 : 379.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 205.0) no description available & (gnl|cdd|33294 : 191.0) no description available & (reliability: 758.0) & (original description: Putative DIN11, Description = Flavonol synthase-like protein, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf05151_26530-30109' '(at2g44800 : 439.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 8435 Blast hits to 8385 proteins in 967 species: Archae - 0; Bacteria - 1060; Metazoa - 91; Fungi - 1008; Plants - 4904; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|35365 : 291.0) no description available & (p28038|fl3h_horvu : 158.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Hordeum vulgare (Barley) & (gnl|cdd|33294 : 147.0) no description available & (reliability: 878.0) & (original description: Putative At2g44800, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf06611_70908-86459' '(at4g33360 : 378.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 126.0) no description available & (gnl|cdd|30800 : 93.1) no description available & (reliability: 756.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 968.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf08195_330773-334766' '(at4g25310 : 377.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 305.0) no description available & (q07512|fls_pethy : 177.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 754.0) & (original description: Putative DIOX2, Description = Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf08195_348435-352938' '(at1g17020 : 380.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 301.0) no description available & (o04706|gao1b_wheat : 176.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 760.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf12205_494417-499205' '(at1g17020 : 359.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04706|gao1b_wheat : 165.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 160.0) no description available & (reliability: 718.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T
'16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf02429_595256-608361' '(q07512|fls_pethy : 574.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (at5g08640 : 386.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (gnl|cdd|35365 : 299.0) no description available & (gnl|cdd|33294 : 156.0) no description available & (reliability: 772.0) & (original description: Putative FL, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 258.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 276.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 256.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.3scaffold7598_49131-52525' '(p56725|zox_phavu : 447.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 192.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 141.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 346.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 234.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 304.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 372.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf00492_135541-138914' '(p56725|zox_phavu : 485.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g31750 : 192.0) UDP-glucosyl transferase 74D1 (UGT74D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8199 Blast hits to 8111 proteins in 470 species: Archae - 0; Bacteria - 484; Metazoa - 2414; Fungi - 25; Plants - 5092; Viruses - 117; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 91.5) no description available & (reliability: 356.0) & (original description: Putative ZOG3, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 372.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf02476_340145-343635' '(at2g15480 : 339.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 183.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 636.0) & (original description: Putative GAME2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf02476_370700-374205' '(at4g34135 : 330.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32004 : 103.0) no description available & (reliability: 660.0) & (original description: Putative SAP1, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 706.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 286.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf06344_38693-42120' '(at4g34131 : 530.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 234.0) no description available & (p56725|zox_phavu : 201.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.2) no description available & (reliability: 1012.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf07563_250606-253929' '(at4g34131 : 490.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 243.0) no description available & (p56725|zox_phavu : 179.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 912.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 322.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 332.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 300.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12919_56571-60157' '(at4g34131 : 503.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p56725|zox_phavu : 186.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.1) no description available & (reliability: 978.0) & (original description: Putative gt5, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12919_165422-168849' '(at4g34131 : 535.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 229.0) no description available & (p56725|zox_phavu : 202.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 1020.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'nbv0.5scaffold2277_44958-49667' '(at5g17050 : 445.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43641|ufog_solme : 340.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 185.0) no description available & (gnl|cdd|79510 : 147.0) no description available & (reliability: 890.0) & (original description: Putative bz, Description = Glycosyltransferase, PFAM = PF00201)' T
'16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'niben101scf00906_67102-70705' '(q43641|ufog_solme : 613.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 424.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|79510 : 140.0) no description available & (reliability: 848.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'niben101scf05307_3296-6624' '(q43641|ufog_solme : 605.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 413.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 135.0) no description available & (reliability: 826.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'16.8.5' 'secondary metabolism.flavonoids.isoflavones' '' ''
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'nbv0.3scaffold28774_18472-25361' '(at4g34540 : 339.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 254.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 190.0) no description available & (reliability: 678.0) & (original description: Putative PLR3, Description = Probable pinoresinol-lariciresinol reductase 3, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'nbv0.5scaffold704_10265-17180' '(at4g34540 : 387.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 288.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 229.0) no description available & (reliability: 774.0) & (original description: Putative PLR3, Description = Probable pinoresinol-lariciresinol reductase 3, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101ctg14704_1-2257' '(at4g34540 : 114.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52580|ifrh_maize : 97.1) Isoflavone reductase homolog IRL (EC 1.3.1.-) - Zea mays (Maize) & (gnl|cdd|86857 : 89.5) no description available & (reliability: 228.0) & (original description: Putative IRL, Description = AtPLR3, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf00261_179995-182369' '(at1g32100 : 173.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|86857 : 109.0) no description available & (p52578|ifrh_soltu : 95.5) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 334.0) & (original description: Putative PLR1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf01418_67513-72791' '(at1g32100 : 459.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 273.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 253.0) no description available & (reliability: 864.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf01418_181246-184561' '(at1g32100 : 391.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 258.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 250.0) no description available & (reliability: 750.0) & (original description: Putative EGS1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03045_201280-204833' '(p52579|ifrh_tobac : 605.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at4g39230 : 398.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|86857 : 267.0) no description available & (reliability: 796.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03214_102534-106993' '(p52578|ifrh_soltu : 555.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at4g39230 : 458.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|86857 : 268.0) no description available & (reliability: 916.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03602_317172-320135' '(at4g34540 : 103.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PLR3, Description = Isoflavone reductase like, PFAM = )' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf04113_626327-630459' '(at1g75280 : 458.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 434.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 290.0) no description available & (reliability: 916.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf04113_690157-696884' '(at1g75280 : 422.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 407.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 265.0) no description available & (reliability: 844.0) & (original description: Putative IFR, Description = Isoflavone reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf06171_324241-328396' '(at1g75280 : 456.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 436.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 288.0) no description available & (reliability: 912.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T
'16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf07146_5222-26321' '(at4g34540 : 308.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 228.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 155.0) no description available & (reliability: 616.0) & (original description: Putative PLR3, Description = Isoflavone reductase like, PFAM = PF05368;PF05368)' T
'16.8.5.2' 'secondary metabolism.flavonoids.isoflavones.chalcone reductase' '' ''
'16.8.5.3' 'secondary metabolism.flavonoids.isoflavones.isoflavone synthase' '' ''
'16.8.5.4' 'secondary metabolism.flavonoids.isoflavones.hydroxyisoflavone dehydrogenase' '' ''
'16.8.6' 'secondary metabolism.flavonoids.flavonones' '' ''
'16.8.6.1' 'secondary metabolism.flavonoids.flavonones.flavone synthase (FNS)' '' ''
'16.8.6.2' 'secondary metabolism.flavonoids.flavonones.flavone 7-O-glycosyltransferase' '' ''
'16.8.6.3' 'secondary metabolism.flavonoids.flavonones.flavone apiosyltransferase' '' ''
'16.8.7' 'secondary metabolism.flavonoids.flavan 3-ol' '' ''
'16.8.7.1' 'secondary metabolism.flavonoids.flavan 3-ol.leucoanthocyanidin 4-reductase (LAR)' '' ''
'16.8.8' 'secondary metabolism.flavonoids.flavonoid glycosylations' '' ''
'16.8.8.1' 'secondary metabolism.flavonoids.flavonoid glycosylations.anthocyanidin-3-O-glycoside-6'-rhamnosyltransferase' '' ''
'16.8.8.2' 'secondary metabolism.flavonoids.flavonoid glycosylations.flavonol-3-O-glycoside-rhamnosyltransferase' '' ''
'16.10' 'secondary metabolism.simple phenols' 'nbv0.3scaffold3877_43472-47978' '(at5g05390 : 842.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 578.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1684.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07731;PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'nbv0.3scaffold46600_12062-16385' '(at2g40370 : 859.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36477 : 626.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 172.0) no description available & (reliability: 1718.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07732;PF07731;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'nbv0.5scaffold1490_17558-298019' '(at5g60020 : 323.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 218.0) no description available & (gnl|cdd|87357 : 156.0) no description available & (p24792|aso_cucma : 94.4) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 646.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732;PF07731;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'nbv0.5scaffold2853_122254-125402' '(at5g09360 : 136.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 124.0) no description available & (gnl|cdd|84744 : 106.0) no description available & (reliability: 272.0) & (original description: Putative LAC, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben044scf00011329ctg006_8085-12869' '(at5g05390 : 886.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 608.0) no description available & (p24792|aso_cucma : 231.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1772.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF00394;PF07731;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben044scf00017986ctg004_1-1188' '(at2g46570 : 131.0) putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).; laccase 6 (LAC6); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: shoot, hypocotyl, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 9565 Blast hits to 7786 proteins in 1266 species: Archae - 28; Bacteria - 3648; Metazoa - 481; Fungi - 3482; Plants - 1556; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). & (gnl|cdd|87357 : 104.0) no description available & (gnl|cdd|36477 : 102.0) no description available & (reliability: 262.0) & (original description: Putative LAC2, Description = Urishiol oxidase, PFAM = PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben044scf00037632ctg002_13561-19682' '(at3g09220 : 678.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (p14133|aso_cucsa : 198.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 151.0) no description available & (reliability: 1356.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00066_45560-50947' '(at2g29130 : 827.0) putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration; laccase 2 (LAC2); FUNCTIONS IN: laccase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 17 (TAIR:AT5G60020.1); Has 9820 Blast hits to 8133 proteins in 1393 species: Archae - 28; Bacteria - 3936; Metazoa - 505; Fungi - 3408; Plants - 1575; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|36477 : 591.0) no description available & (q40588|aso_tobac : 216.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 161.0) no description available & (reliability: 1654.0) & (original description: Putative LAC2, Description = Laccase-2, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00288_512090-516348' '(at2g30210 : 741.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p24792|aso_cucma : 226.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 167.0) no description available & (reliability: 1482.0) & (original description: Putative LAC3, Description = Laccase-3, PFAM = PF07732;PF07731;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00305_290192-294402' '(at5g03260 : 820.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 11 (LAC11); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p14133|aso_cucsa : 216.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 160.0) no description available & (reliability: 1640.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07731;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00348_642508-648481' '(at2g38080 : 873.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (p14133|aso_cucsa : 234.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1746.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF07732;PF07731;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00592_27228-31839' '(at5g03260 : 850.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 11 (LAC11); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (p14133|aso_cucsa : 232.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 161.0) no description available & (reliability: 1700.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00603_285291-289586' '(at2g46570 : 814.0) putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).; laccase 6 (LAC6); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: shoot, hypocotyl, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 9565 Blast hits to 7786 proteins in 1266 species: Archae - 28; Bacteria - 3648; Metazoa - 481; Fungi - 3482; Plants - 1556; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). & (gnl|cdd|36477 : 548.0) no description available & (p14133|aso_cucsa : 237.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1628.0) & (original description: Putative LAC6, Description = Laccase-6, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf00960_127472-133539' '(at5g09360 : 632.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 543.0) no description available & (p24792|aso_cucma : 215.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1264.0) & (original description: Putative LAC9, Description = Putative laccase-9, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf01237_677330-681643' '(at2g40370 : 893.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36477 : 623.0) no description available & (p24792|aso_cucma : 239.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 170.0) no description available & (reliability: 1786.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf01738_653722-659772' '(at2g38080 : 884.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (p14133|aso_cucsa : 228.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 160.0) no description available & (reliability: 1768.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf02456_56786-107695' '(at5g05390 : 897.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 622.0) no description available & (p24792|aso_cucma : 230.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 173.0) no description available & (reliability: 1794.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf02637_453914-457106' '(at5g48100 : 213.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 184.0) no description available & (gnl|cdd|84744 : 88.1) no description available & (reliability: 426.0) & (original description: Putative lac2, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf02737_46622-60878' '(at5g48100 : 580.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 541.0) no description available & (q40588|aso_tobac : 211.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 147.0) no description available & (reliability: 1160.0) & (original description: Putative TT10, Description = Laccase-15, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03062_248893-261032' '(at5g05390 : 786.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 604.0) no description available & (gnl|cdd|87357 : 169.0) no description available & (p14133|aso_cucsa : 125.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1572.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03062_248926-260913' '(at5g05390 : 625.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 464.0) no description available & (gnl|cdd|87357 : 170.0) no description available & (p14133|aso_cucsa : 126.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1250.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03325_46900-51993' '(at2g38080 : 886.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (q40588|aso_tobac : 231.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 156.0) no description available & (reliability: 1772.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF00394;PF07731;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03327_1-4323' '(at2g30210 : 731.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 606.0) no description available & (p24792|aso_cucma : 223.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 165.0) no description available & (reliability: 1462.0) & (original description: Putative LAC17, Description = Putative laccase-17, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03500_251083-255102' '(at2g38080 : 772.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 605.0) no description available & (p24792|aso_cucma : 204.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1544.0) & (original description: Putative lac2, Description = Laccase, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03500_253052-255480' '(at2g38080 : 113.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 90.0) no description available & (reliability: 226.0) & (original description: Putative LAC1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03786_158060-164069' '(at3g09220 : 741.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 608.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 153.0) no description available & (reliability: 1482.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03860_532899-538084' '(at2g38080 : 891.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 629.0) no description available & (p14133|aso_cucsa : 233.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1782.0) & (original description: Putative LAC10, Description = Laccase-10, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf03966_45306-49333' '(at5g60020 : 857.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 573.0) no description available & (q40588|aso_tobac : 191.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 162.0) no description available & (reliability: 1714.0) & (original description: Putative LAC17, Description = Laccase-17, PFAM = PF07731;PF07732;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf06942_291522-295738' '(at2g30210 : 774.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 609.0) no description available & (p24792|aso_cucma : 227.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 163.0) no description available & (reliability: 1548.0) & (original description: Putative LAC3, Description = Laccase-3, PFAM = PF07731;PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf08294_553545-559544' '(at3g09220 : 680.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 604.0) no description available & (p14133|aso_cucsa : 193.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1360.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf09649_648124-654804' '(at5g09360 : 635.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 546.0) no description available & (p14133|aso_cucsa : 214.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1270.0) & (original description: Putative LAC14, Description = Laccase-14, PFAM = PF07732;PF07731;PF00394)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf09649_694665-699995' '(at5g09360 : 640.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 544.0) no description available & (p14133|aso_cucsa : 221.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 144.0) no description available & (reliability: 1280.0) & (original description: Putative TT10, Description = Laccase-15, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf09678_253332-259464' '(at2g38080 : 722.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 602.0) no description available & (p24792|aso_cucma : 204.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 157.0) no description available & (reliability: 1444.0) & (original description: Putative LAC22, Description = Laccase-22, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf10152_593949-598123' '(at5g05390 : 845.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 620.0) no description available & (p24792|aso_cucma : 219.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1690.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf14877_124945-129400' '(at5g60020 : 863.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 584.0) no description available & (q40588|aso_tobac : 183.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 163.0) no description available & (reliability: 1726.0) & (original description: Putative LAC17, Description = Laccase-17, PFAM = PF00394;PF07732;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf14877_198503-204749' '(at5g60020 : 761.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 602.0) no description available & (q40588|aso_tobac : 209.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 164.0) no description available & (reliability: 1522.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07731;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf17701_174444-180032' '(at5g48100 : 600.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 529.0) no description available & (p14133|aso_cucsa : 212.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 142.0) no description available & (reliability: 1200.0) & (original description: Putative LAC21, Description = Laccase-21, PFAM = PF07731;PF00394;PF07732)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf20493_30157-35520' '(at5g60020 : 752.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 579.0) no description available & (p14133|aso_cucsa : 187.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1504.0) & (original description: Putative PGSC0003DMG401008903, Description = Laccase, PFAM = PF07732;PF00394;PF07731)' T
'16.10' 'secondary metabolism.simple phenols' 'niben101scf20493_80496-85518' '(at5g60020 : 756.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 599.0) no description available & (p14133|aso_cucsa : 221.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 165.0) no description available & (reliability: 1512.0) & (original description: Putative Lac3, Description = Laccase, PFAM = PF00394;PF07732;PF07731)' T
'16.20' 'secondary metabolism.amino acid derivatives' '' ''
'16.20.1001' 'secondary metabolism.amino acid derivatives' 'dopa' 'secondary metabolism, amino acid derivatives' M
'16.20.1002' 'secondary metabolism.amino acid derivatives' 'dopamine' 'secondary metabolism, amino acid derivatives' M
'16.20.1003' 'secondary metabolism.amino acid derivatives' 'noradrenaline' 'secondary metabolism, amino acid derivatives' M
'16.20.1004' 'secondary metabolism.amino acid derivatives' 'tryptamine' 'secondary metabolism, shikimic acid pathway' M
'16.20.1005' 'secondary metabolism.amino acid derivatives' 'tyramine' 'secondary metabolism, shikimic acid pathway' M
'16.20.1006' 'secondary metabolism.amino acid derivatives' '3,4-dihydroxybenzylamine' 'Dopamine derivative' M
'16.99' 'secondary metabolism.unspecified' 'niben101scf01204_95065-104671' '(at5g04620 : 630.0) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.; biotin F (BIOF); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36573 : 422.0) no description available & (gnl|cdd|81801 : 335.0) no description available & (reliability: 1260.0) & (original description: Putative BIOF, Description = 8-amino-7-oxononanoate synthase, PFAM = PF00155)' T
'16.99' 'secondary metabolism.unspecified' 'niben101scf03836_20026-30925' '(at5g04620 : 578.0) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.; biotin F (BIOF); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36573 : 415.0) no description available & (gnl|cdd|30505 : 335.0) no description available & (reliability: 1156.0) & (original description: Putative BIOF, Description = 8-amino-7-oxononanoate synthase, PFAM = PF00155)' T
'16.99' 'secondary metabolism.unspecified' 'niben101scf07493_416126-419484' '(at5g42830 : 500.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 241.0) no description available & (o24645|hcbt1_diaca : 97.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 952.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T
'16.99' 'secondary metabolism.unspecified' 'niben101scf09840_39827-42801' '(at5g52810 : 379.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81857 : 325.0) no description available & (gnl|cdd|38217 : 311.0) no description available & (reliability: 758.0) & (original description: Putative ala1, Description = Alanine dehydrogenase, PFAM = PF02423)' T
'16.99' 'secondary metabolism.unspecified' 'niben101scf17267_2622-7114' '(at5g67150 : 331.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 254.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 616.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T
'16.99.1001' 'secondary metabolism.unspecified' 'digitoxin' 'secondary metabolism' M
'16.99.1003' 'secondary metabolism.unspecified' 'acetylsalicylate' 'secondary metabolism' M
'16.99.1004' 'secondary metabolism.unspecified' '4-(methylamino)benzoate' 'secondary metabolism' M
'16.99.1005' 'secondary metabolism.unspecified' '4-aminobenzoate' 'secondary metabolism' M
'16.99.1006' 'secondary metabolism.unspecified' '3-phenylpropionate' 'secondary metabolism' M
'16.99.1007' 'secondary metabolism.unspecified' '2-aminobenzoate' 'secondary metabolism' M
'16.99.1008' 'secondary metabolism.unspecified' '1-o-benzyl-beta-glucoside' 'secondary metabolism' M
'16.99.1009' 'secondary metabolism.unspecified' 'salicin' 'secondary metabolism' M
'16.99.1010' 'secondary metabolism.unspecified' '3-(2,4-dihydoxyphenyl)propionate' 'secondary metabolism' M
'16.99.1011' 'secondary metabolism.unspecified' '1-caffeoylquinate' 'secondary metabolism' M
'16.99.1012' 'secondary metabolism.unspecified' 'buthylhydroxytoluene' 'secondary metabolism' M
'16.99.1013' 'secondary metabolism.unspecified' 'mandelate' 'secondary metabolism' M
'16.99.1014' 'secondary metabolism.unspecified' 'helicin' 'secondary metabolism, glucoside' M
'16.99.1014' 'secondary metabolism.unspecified' 'quinate' 'secondary metabolism' M
'16.99.1016' 'secondary metabolism.unspecified' 'acrylamide' 'Styrene degradation (to confirm in plants)' M
'16.99.1017' 'secondary metabolism.unspecified' 'clotrimazole' 'secondary metabolism (?); Inhibitor of P450' M
'16.99.1018' 'secondary metabolism.unspecified' 'propyl gallate' 'secondary metabolism, antioxydant' M
'17' 'hormone metabolism' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'17' 'hormone metabolism' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'17.1' 'hormone metabolism.abscisic acid' '' ''
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold37434_1899-6784' '(at5g42560 : 272.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 186.0) no description available & (reliability: 544.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold39340_14393-17913' '(at3g21760 : 387.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 193.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 706.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold57643_1350-5880' '(at3g21760 : 396.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.4) no description available & (reliability: 732.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 3066.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00014754ctg015_1-4683' '(at5g42560 : 273.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 189.0) no description available & (reliability: 546.0) & (original description: Putative PGSC0003DMG400029421, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00016409ctg011_3353-6943' '(at1g16540 : 224.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 218.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37573 : 96.2) no description available & (gnl|cdd|33030 : 85.0) no description available & (reliability: 448.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03473)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00016409ctg013_2773-6537' '(q655r6|mocos_orysa : 127.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (at1g16540 : 125.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03476)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3114.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 644.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00175_209120-212595' '(at3g21790 : 343.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (p56725|zox_phavu : 146.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 664.0) & (original description: Putative UDPG7, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00270_1487043-1491573' '(at3g21760 : 381.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 702.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3080.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00878_234021-243137' '(at2g44990 : 746.0) More Axillary Branching; carotenoid cleavage dioxygenases.; carotenoid cleavage dioxygenase 7 (CCD7); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 211 Blast hits to 206 proteins in 62 species: Archae - 2; Bacteria - 69; Metazoa - 8; Fungi - 31; Plants - 96; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|36499 : 232.0) no description available & (gnl|cdd|33468 : 212.0) no description available & (reliability: 1492.0) & (original description: Putative CCD7, Description = Carotenoid cleavage dioxygenase 7, chloroplastic, PFAM = PF03055)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01372_170013-175403' '(at1g75700 : 106.0) HVA22-like protein G (HVA22G); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 1473 Blast hits to 1473 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 189; Plants - 488; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36937 : 85.0) no description available & (reliability: 212.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01372_171265-176395' '(at5g42560 : 201.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 151.0) no description available & (reliability: 402.0) & (original description: Putative pco066358, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01611_699271-705246' '(at4g32810 : 720.0) Encodes a protein with similarity to carotenoid cleaving deoxygenases, the enzymes that cleave beta-carotene. Involved in the production of a graft transmissable signal to suppress axillary branching. Protein is localized to chloroplast stroma and expressed primarily in root tip. Mutants in the gene exhibit increased shoot branching, and light-dependent defects in hook opening and hypocotyl/root elongation. Only upregulated by auxin in the root and hypocotyl, and this is not required for the inhibition of shoot branching.; carotenoid cleavage dioxygenase 8 (CCD8); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 2642 Blast hits to 2570 proteins in 479 species: Archae - 17; Bacteria - 769; Metazoa - 368; Fungi - 139; Plants - 827; Viruses - 0; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|36499 : 293.0) no description available & (gnl|cdd|33468 : 194.0) no description available & (reliability: 1440.0) & (original description: Putative CCD8B, Description = Carotenoid cleavage dioxygenase 8 homolog B, chloroplastic, PFAM = PF03055)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02390_211792-217052' '(at2g42820 : 190.0) HVA22-like protein F (HVA22F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36936 : 104.0) no description available & (q07764|hva22_horvu : 100.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|86250 : 99.0) no description available & (reliability: 380.0) & (original description: Putative HVA22F, Description = HVA22-like protein f, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02437_186426-191041' '(at3g21750 : 416.0) Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro; UDP-glucosyl transferase 71B1 (UGT71B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21760.1); Has 7577 Blast hits to 7528 proteins in 438 species: Archae - 0; Bacteria - 404; Metazoa - 2188; Fungi - 36; Plants - 4867; Viruses - 24; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 83.5) no description available & (reliability: 798.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 760.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02807_320011-323549' '(at3g21760 : 454.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 162.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 844.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf03128_423699-427335' '(at5g42560 : 249.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 187.0) no description available & (gnl|cdd|86250 : 80.3) no description available & (reliability: 498.0) & (original description: Putative pco066358, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf04754_158958-163608' '(at2g42820 : 190.0) HVA22-like protein F (HVA22F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36936 : 103.0) no description available & (q07764|hva22_horvu : 101.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|86250 : 97.2) no description available & (reliability: 380.0) & (original description: Putative HVA22F, Description = HVA22-like protein f, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 630.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf05411_241059-244947' '(at5g42560 : 241.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 185.0) no description available & (reliability: 482.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08020_96310-101242' '(at5g42560 : 219.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 161.0) no description available & (reliability: 438.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08564_267242-303744' '(at1g16540 : 733.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 600.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37353 : 230.0) no description available & (gnl|cdd|30866 : 142.0) no description available & (reliability: 1466.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03473;PF03476;PF00266;PF00266)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08564_270193-274093' '(at1g16540 : 228.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 223.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37353 : 90.2) no description available & (reliability: 456.0) & (original description: Putative mal, Description = MCS, PFAM = PF00266)' T
'17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf27706_9857-14240' '(at5g42560 : 243.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 180.0) no description available & (reliability: 486.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis' '' ''
'17.1.1.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase' 'niben101scf01553_153896-162008' '(q40412|aba2_nicpl : 1247.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g67030 : 895.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (gnl|cdd|37825 : 291.0) no description available & (gnl|cdd|75731 : 151.0) no description available & (reliability: 1790.0) & (original description: Putative ABA2, Description = Zeaxanthin epoxidase, chloroplastic, PFAM = PF00498;PF01494;PF01494)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'nbv0.3scaffold39805_6479-10239' '(at3g24220 : 689.0) A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 6 (NCED6); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2907 Blast hits to 2870 proteins in 485 species: Archae - 16; Bacteria - 803; Metazoa - 275; Fungi - 199; Plants - 893; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36499 : 510.0) no description available & (gnl|cdd|86222 : 502.0) no description available & (reliability: 1378.0) & (original description: Putative NCED6, Description = 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben044scf00027368ctg008_22858-26301' '(at4g19170 : 477.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 370.0) no description available & (gnl|cdd|36499 : 269.0) no description available & (reliability: 954.0) & (original description: Putative CCD4, Description = Carotenoid cleavage dioxygenase, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf00897_19544-22491' '(at3g14440 : 475.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.; nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|86222 : 343.0) no description available & (gnl|cdd|36499 : 309.0) no description available & (reliability: 950.0) & (original description: Putative NCED, Description = 9-cis-epoxycarotenoid dioxygenase, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf02301_232564-237786' '(at1g30100 : 840.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 5 (NCED5); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 2 (TAIR:AT4G18350.1); Has 2882 Blast hits to 2845 proteins in 494 species: Archae - 16; Bacteria - 802; Metazoa - 232; Fungi - 202; Plants - 893; Viruses - 0; Other Eukaryotes - 737 (source: NCBI BLink). & (gnl|cdd|36499 : 574.0) no description available & (gnl|cdd|86222 : 565.0) no description available & (reliability: 1680.0) & (original description: Putative NCED1, Description = 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf02893_126243-130003' '(at3g24220 : 694.0) A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 6 (NCED6); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2907 Blast hits to 2870 proteins in 485 species: Archae - 16; Bacteria - 803; Metazoa - 275; Fungi - 199; Plants - 893; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36499 : 512.0) no description available & (gnl|cdd|86222 : 504.0) no description available & (reliability: 1388.0) & (original description: Putative NCED6, Description = 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf04174_652940-656778' '(at3g14440 : 840.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.; nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|36499 : 583.0) no description available & (gnl|cdd|86222 : 573.0) no description available & (reliability: 1680.0) & (original description: Putative NCED1, Description = 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf08613_195195-201078' '(at4g19170 : 719.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 514.0) no description available & (gnl|cdd|36499 : 391.0) no description available & (reliability: 1438.0) & (original description: Putative ccd4, Description = Carotenoid cleavage dioxygenase 4, PFAM = PF03055)' T
'17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf08613_197621-201091' '(at4g19170 : 476.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 366.0) no description available & (gnl|cdd|36499 : 261.0) no description available & (reliability: 952.0) & (original description: Putative CCD4, Description = Carotenoid cleavage dioxygenase, PFAM = PF03055)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'nbv0.3scaffold7271_143-5771' '(at1g52340 : 381.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 216.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 214.0) no description available & (gnl|cdd|81679 : 196.0) no description available & (reliability: 762.0) & (original description: Putative ABA2, Description = Xanthoxin dehydrogenase, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'nbv0.5scaffold3692_139905-143344' '(at1g52340 : 233.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 211.0) no description available & (gnl|cdd|75407 : 196.0) no description available & (p50160|ts2_maize : 186.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben044scf00000867ctg038_4021-7606' '(at1g52340 : 159.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 135.0) no description available & (p50160|ts2_maize : 124.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 116.0) no description available & (reliability: 318.0) & (original description: Putative ABA2, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben044scf00017652ctg011_4242-7825' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 187.0) no description available & (gnl|cdd|81825 : 166.0) no description available & (p50160|ts2_maize : 161.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf01440_257879-261040' '(at1g52340 : 237.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 211.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 201.0) no description available & (gnl|cdd|82237 : 187.0) no description available & (reliability: 474.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf01453_405014-409001' '(at1g52340 : 338.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 212.0) no description available & (p50160|ts2_maize : 199.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 186.0) no description available & (reliability: 676.0) & (original description: Putative ABA2, Description = Xanthoxin dehydrogenase, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf04641_56278-59244' '(at1g52340 : 206.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 184.0) no description available & (p50160|ts2_maize : 162.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 412.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf04641_141600-144793' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 189.0) no description available & (p50160|ts2_maize : 164.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 422.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf08390_351606-355409' '(at1g52340 : 201.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 186.0) no description available & (gnl|cdd|82618 : 180.0) no description available & (p50160|ts2_maize : 178.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 402.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf10396_271050-274406' '(at1g52340 : 228.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 213.0) no description available & (gnl|cdd|75407 : 197.0) no description available & (p50160|ts2_maize : 182.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 456.0) & (original description: Putative ABA2, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf14679_64392-67219' '(at1g52340 : 208.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 195.0) no description available & (p50160|ts2_maize : 185.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 179.0) no description available & (reliability: 416.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf15760_5495-8656' '(at3g51680 : 235.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 206.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|82237 : 188.0) no description available & (reliability: 468.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 3034.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T
'17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3126.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T
'17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3066.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T
'17.1.1.2' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation' '' ''
'17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'nbv0.3scaffold7643_107-4576' '(at1g19630 : 291.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 269.0) no description available & (gnl|cdd|84486 : 221.0) no description available & (q9axh9|kao1_horvu : 207.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 548.0) & (original description: Putative CYP707A, Description = Abscisic acid 8-hydroxylase 3, PFAM = PF00067)' T
'17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben044scf00026213ctg008_373-10949' '(at4g19230 : 750.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 222.0) no description available & (reliability: 1500.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben101scf07288_919811-924250' '(at4g19230 : 754.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 283.0) no description available & (q8gsq1|c85a1_orysa : 258.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 219.0) no description available & (reliability: 1508.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben101scf10415_1664-22200' '(at4g19230 : 741.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1482.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'17.1.1.1001' 'hormone metabolism.abscisic acid.synthesis-degradation' 'mevalonolactone' 'hormone metabolism.abscisic acid precursor' M
'17.1.1.1002' 'hormone metabolism.abscisic acid.synthesis-degradation' 'aba' 'hormone metabolism.abscisic acid' M
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.3scaffold39620_1-4455' '(at4g32010 : 132.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold1693_26584-34908' '(at3g24650 : 375.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 283.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.3) no description available & (reliability: 750.0) & (original description: Putative wbABI3, Description = ABI-3 homolog, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold2293_206800-212174' '(at3g24650 : 339.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 291.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 85.5) no description available & (reliability: 678.0) & (original description: Putative abi3, Description = Putative ABI3 homolog, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold3943_171426-175707' '(at4g34000 : 218.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00004410ctg013_1492-9731' '(at4g32010 : 331.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00005089ctg000_22192-27518' '(at3g24650 : 369.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 269.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.7) no description available & (reliability: 738.0) & (original description: Putative ABI3, Description = B3 domain-containing transcription factor ABI3, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00008902ctg002_849-5461' '(at4g32010 : 130.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00016397ctg002_42288-50107' '(at1g72770 : 454.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 248.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 858.0) & (original description: Putative abi1B, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00022704ctg004_1896-13392' '(at3g08550 : 694.0) mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein; KOBITO (KOB1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 94 Blast hits to 94 proteins in 32 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1388.0) & (original description: Putative ELD1, Description = Glycosyltransferase-like KOBITO 1, PFAM = )' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00034204ctg022_6018-9812' '(at4g34000 : 215.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00035041ctg002_9161-13348' '(at4g34000 : 246.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00035571ctg007_11517-15729' '(at2g30470 : 131.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = )' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00038103ctg008_4087-8775' '(at5g57050 : 393.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|47660 : 230.0) no description available & (reliability: 786.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00107_26794-31471' '(at4g34000 : 197.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative bZIP, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 2, PFAM = PF00170)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00530_1047619-1057309' '(at3g11410 : 251.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 242.0) no description available & (gnl|cdd|35917 : 235.0) no description available & (reliability: 464.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00530_1047625-1057258' '(at3g11410 : 236.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 234.0) no description available & (gnl|cdd|35917 : 229.0) no description available & (reliability: 436.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00611_819141-824598' '(at5g57050 : 390.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 239.0) no description available & (gnl|cdd|47660 : 225.0) no description available & (reliability: 780.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00640_504553-510241' '(at2g20770 : 530.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 2 (GCL2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 689 Blast hits to 684 proteins in 212 species: Archae - 0; Bacteria - 201; Metazoa - 271; Fungi - 68; Plants - 112; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37998 : 454.0) no description available & (gnl|cdd|86797 : 263.0) no description available & (reliability: 958.0) & (original description: Putative GCL2, Description = LanC-like protein GCL2, PFAM = PF05147)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf02482_304565-313674' '(at4g32010 : 333.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf03256_140710-163536' '(at2g30470 : 658.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 87.0) no description available & (p37398|viv_orysa : 83.6) Protein viviparous homolog - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF02362;PF07496)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf03584_285143-290268' '(at1g72770 : 472.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 252.0) no description available & (gnl|cdd|47660 : 239.0) no description available & (reliability: 864.0) & (original description: Putative HAB1, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf04040_630300-642579' '(at1g72770 : 458.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 250.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 862.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf04552_202854-208373' '(at5g20910 : 305.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1); Has 9587 Blast hits to 9565 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 2561; Fungi - 845; Plants - 4808; Viruses - 65; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative AIP2, Description = E3 ubiquitin-protein ligase AIP2, PFAM = PF13639)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf05756_81894-86349' '(at5g57050 : 392.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 237.0) no description available & (gnl|cdd|47660 : 226.0) no description available & (reliability: 784.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf06222_218736-236790' '(at2g30470 : 436.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (reliability: 872.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07007_379401-391086' '(at1g52920 : 334.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37998 : 328.0) no description available & (gnl|cdd|86797 : 169.0) no description available & (reliability: 668.0) & (original description: Putative GCL1, Description = G protein coupled receptor, PFAM = PF05147)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07007_408162-413137' '(at1g52920 : 542.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37998 : 491.0) no description available & (gnl|cdd|86797 : 303.0) no description available & (reliability: 1084.0) & (original description: Putative GCR2, Description = LanC-like protein GCR2, PFAM = PF05147)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07278_31158-34952' '(at4g34000 : 194.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07951_321495-330147' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1192.0) & (original description: Putative VAL1, Description = B3 domain-containing transcription repressor VAL1, PFAM = PF07496;PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07951_322083-335047' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1186.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF07496;PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf08918_72260-89034' '(at3g08550 : 708.0) mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein; KOBITO (KOB1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 94 Blast hits to 94 proteins in 32 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1416.0) & (original description: Putative ELD1, Description = Glycosyltransferase-like KOBITO 1, PFAM = )' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf09130_521393-526061' '(at1g72770 : 466.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|29062 : 235.0) no description available & (reliability: 848.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf21140_146257-153379' '(at3g24650 : 388.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 284.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.3) no description available & (reliability: 776.0) & (original description: Putative ABI3, Description = B3 domain-containing transcription factor ABI3, PFAM = PF02362)' T
'17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf25868_8314-12957' '(at4g34000 : 257.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold739_16269-30875' '(at5g08350 : 196.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold4649_1-12847' '(at2g22475 : 271.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative GEM, Description = GEM-like protein 5, PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold22470_5351-13828' '(at4g36720 : 226.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 114.0) no description available & (gnl|cdd|86250 : 104.0) no description available & (reliability: 452.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold23540_27171-31168' '(at2g29380 : 325.0) highly ABA-induced PP2C gene 3 (HAI3); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6960 Blast hits to 6933 proteins in 604 species: Archae - 4; Bacteria - 618; Metazoa - 1585; Fungi - 779; Plants - 2700; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). & (gnl|cdd|35917 : 238.0) no description available & (gnl|cdd|47660 : 231.0) no description available & (reliability: 610.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold55721_2053-5777' '(at2g17770 : 119.0) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 238.0) & (original description: Putative FDP, Description = bZIP transcription factor 27, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold738_481429-535408' '(at5g08350 : 172.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold893_227146-245764' '(at1g28200 : 283.0) VirF-interacting protein FIP1; FH interacting protein 1 (FIP1); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 416 Blast hits to 413 proteins in 43 species: Archae - 4; Bacteria - 12; Metazoa - 9; Fungi - 9; Plants - 369; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold1116_374363-378540' '(at1g69700 : 226.0) Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.; HVA22 homologue C (HVA22C); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 1462 Blast hits to 1462 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 635; Fungi - 218; Plants - 519; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|36936 : 130.0) no description available & (gnl|cdd|86250 : 113.0) no description available & (q07764|hva22_horvu : 95.9) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 452.0) & (original description: Putative HVA22C, Description = HVA22-like protein c, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold3700_139736-144167' '(at1g45249 : 236.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 472.0) & (original description: Putative ABF2, Description = Abscisic acid responsive elements-binding factor 2, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold3943_171426-175707' '(at4g34000 : 218.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold4547_23231-32990' '(at1g74520 : 123.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 106.0) no description available & (gnl|cdd|36936 : 97.8) no description available & (reliability: 246.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold4871_67756-93869' '(at5g23370 : 196.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00008502ctg012_3635-13365' '(at2g22475 : 229.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00020494ctg003_1077-4384' '(at5g23370 : 197.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00020981ctg003_1639-4793' '(at5g08350 : 197.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00028352ctg007_38582-41160' '(at2g47770 : 135.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00035586ctg001_10529-15079' '(at4g36720 : 132.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00048421ctg000_1-3200' '(at1g74520 : 113.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36936 : 85.0) no description available & (gnl|cdd|86250 : 83.7) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400004398, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00107_26794-31471' '(at4g34000 : 197.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative bZIP, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 2, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00321_564923-569982' '(at4g36720 : 230.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 122.0) no description available & (gnl|cdd|86250 : 116.0) no description available & (reliability: 460.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00393_187752-193017' '(at3g56850 : 189.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00530_1047619-1057309' '(at3g11410 : 251.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 242.0) no description available & (gnl|cdd|35917 : 235.0) no description available & (reliability: 480.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00530_1047625-1057258' '(at3g11410 : 236.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 234.0) no description available & (gnl|cdd|35917 : 229.0) no description available & (reliability: 448.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00821_1392216-1396259' '(at5g13200 : 306.0) GRAM domain family protein; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At5g13200, Description = GEM-like protein 5, PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01046_247460-250427' '(at4g24960 : 145.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (q07764|hva22_horvu : 145.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|36936 : 107.0) no description available & (gnl|cdd|86250 : 98.8) no description available & (reliability: 290.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01267_1068483-1102701' '(at2g22475 : 272.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01784_274254-299871' '(at1g45249 : 269.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 538.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01812_445024-452244' '(at3g56850 : 246.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01999_504759-507426' '(at1g74520 : 87.4) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400004398, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf02155_421555-440006' '(at4g36720 : 225.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 111.0) no description available & (reliability: 450.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf03886_537386-540768' '(q07764|hva22_horvu : 147.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 146.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 105.0) no description available & (reliability: 292.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf03930_614019-618085' '(at1g74520 : 232.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36936 : 133.0) no description available & (gnl|cdd|86250 : 114.0) no description available & (q07764|hva22_horvu : 100.0) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 464.0) & (original description: Putative HVA22A, Description = HVA22-like protein a, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf04632_917110-925242' '(at3g56850 : 242.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf04950_7037-10325' '(q07764|hva22_horvu : 144.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 141.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 112.0) no description available & (gnl|cdd|86250 : 102.0) no description available & (reliability: 282.0) & (original description: Putative HVA22, Description = HVA22-like protein, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_99565-102858' '(at5g23370 : 190.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_107866-111454' '(at5g23370 : 181.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_129477-133265' '(at5g08350 : 189.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05188_109383-112709' '(at5g23370 : 198.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06376_518409-521762' '(at2g17770 : 92.4) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 184.8) & (original description: Putative SPGB, Description = Self-pruning G-box protein, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06382_386094-390760' '(at1g74520 : 86.7) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400009332, Description = HVA22-like protein, PFAM = PF12874;PF13456;PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06424_49050-52591' '(at5g08350 : 161.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = , PFAM = PF02893)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06628_93915-96493' '(at2g47770 : 142.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06628_94137-99135' '(at2g47770 : 115.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TSPO, Description = Benzodiazepine receptor-related family protein, PFAM = PF03073)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf07278_31158-34952' '(at4g34000 : 194.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf07549_244656-251433' '(at1g45249 : 247.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 494.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf08355_369445-374752' '(q07764|hva22_horvu : 150.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 148.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 106.0) no description available & (reliability: 296.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf08936_972590-975717' '(q07764|hva22_horvu : 154.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 152.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 111.0) no description available & (gnl|cdd|86250 : 103.0) no description available & (reliability: 304.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf10085_173877-177440' '(at1g74520 : 107.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 93.4) no description available & (gnl|cdd|36936 : 90.1) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400010683, Description = HVA22-like protein, PFAM = PF03134;PF12874;PF12874)' T
'17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf20961_14005-25299' '(at2g22475 : 323.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T
'17.2' 'hormone metabolism.auxin' 'nbv0.3scaffold39790_14626-19516' '(at3g10870 : 328.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (q40708|pir7a_orysa : 135.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative MES17, Description = Methylesterase 17, PFAM = PF00561)' T
'17.2' 'hormone metabolism.auxin' 'niben101scf03679_27046-31858' '(at3g10870 : 331.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (p52704|hnl_hevbr : 124.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 662.0) & (original description: Putative MES17, Description = Methylesterase 17, PFAM = PF12146)' T
'17.2' 'hormone metabolism.auxin' 'niben101scf04903_146542-149192' '(at3g10870 : 169.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (p52704|hnl_hevbr : 106.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 338.0) & (original description: Putative Os11g0117900, Description = Os11g0117900 protein, PFAM = PF00561)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.3scaffold2301_6564-12285' '(at5g55250 : 589.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 348.0) no description available & (q9fyz9|bamt_antma : 188.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1178.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.3scaffold8469_36445-41910' '(at3g02875 : 481.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 396.0) no description available & (reliability: 962.0) & (original description: Putative ILL7, Description = IAA-amino acid hydrolase ILR1-like 7, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 312.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 324.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00000492ctg004_1-10851' '(at3g02875 : 463.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 360.0) no description available & (reliability: 926.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00017657ctg007_6289-9897' '(at4g15550 : 467.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 264.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 842.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00048734ctg001_4689-10167' '(at1g51760 : 404.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 295.0) no description available & (reliability: 808.0) & (original description: Putative IAR3, Description = IAA-amino acid hydrolase 3, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 616.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00206_10263-16146' '(at1g51760 : 626.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 398.0) no description available & (reliability: 1252.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF07687;PF01546)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00551_534692-541990' '(at1g51760 : 617.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 411.0) no description available & (reliability: 1234.0) & (original description: Putative ILL2, Description = IAA-amino acid hydrolase ILR1-like 2, PFAM = PF07687;PF01546)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00661_14430-20858' '(at1g24100 : 469.0) Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis; UDP-glucosyl transferase 74B1 (UGT74B1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 7754 Blast hits to 7677 proteins in 493 species: Archae - 0; Bacteria - 488; Metazoa - 2030; Fungi - 39; Plants - 5027; Viruses - 105; Other Eukaryotes - 65 (source: NCBI BLink). & (q41819|iaag_maize : 334.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 938.0) & (original description: Putative UGT74B1, Description = UDP-glycosyltransferase 74B1, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01494_825708-830664' '(at1g51760 : 468.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 422.0) no description available & (reliability: 936.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_54304-57716' '(at4g15550 : 442.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 256.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 210.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 818.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_230122-233534' '(at4g14090 : 364.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 188.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 93.9) no description available & (reliability: 708.0) & (original description: Putative UGT75C1, Description = UDP-glycosyltransferase 75C1, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_262101-265555' '(at1g05530 : 374.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (q41819|iaag_maize : 248.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 744.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 616.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf03227_489844-495971' '(at3g02875 : 494.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 396.0) no description available & (reliability: 988.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf03969_191782-194344' '(at1g05530 : 118.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative 5GT, Description = Glycosyltransferase, PFAM = )' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf04099_842421-848153' '(at5g54140 : 540.0) encodes a protein similar to IAA amino acid conjugate hydrolase; IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31662 : 389.0) no description available & (reliability: 1080.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF07687;PF01546)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf04205_144279-149462' '(at5g55250 : 592.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 358.0) no description available & (q9fyz9|bamt_antma : 190.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1184.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf05080_201541-207982' '(at5g55250 : 593.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 358.0) no description available & (q9fyz9|bamt_antma : 190.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1186.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf08333_242573-251927' '(at1g44350 : 563.0) encodes a protein similar to IAA amino acid conjugate hydrolase.; IAA-leucine resistant (ILR)-like gene 6 (ILL6); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 12322 Blast hits to 12314 proteins in 1908 species: Archae - 129; Bacteria - 9070; Metazoa - 89; Fungi - 234; Plants - 310; Viruses - 0; Other Eukaryotes - 2490 (source: NCBI BLink). & (gnl|cdd|31662 : 385.0) no description available & (reliability: 1126.0) & (original description: Putative ILL6, Description = IAA-amino acid hydrolase ILR1-like 6, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf08390_366471-382304' '(at3g02875 : 493.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 388.0) no description available & (reliability: 986.0) & (original description: Putative ILR1, Description = IAA-amino acid hydrolase ILR1, PFAM = PF01546;PF07687)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 352.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf20904_111830-125714' '(at1g51760 : 605.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 399.0) no description available & (reliability: 1210.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF07687;PF01546)' T
'17.2.1.1001' 'hormone metabolism.auxin.synthesis-degradation' 'beta-indole-3-acetonitrile' 'hormone metabolism.auxin' M
'17.2.1.1002' 'hormone metabolism.auxin' 'indole-3-acetaldehyde' 'hormone metabolism.auxin' M
'17.2.1.1003' 'hormone metabolism.auxin' 'indole-3-acetate' 'hormone metabolism.auxin' M
'17.2.1.1004' 'hormone metabolism.auxin' 'indole-3-acetyl-aspartate' 'hormone metabolism.auxin' M
'17.2.1.1005' 'hormone metabolism.auxin' 'indole-3-butyrate' 'hormone metabolism.auxin' M
'17.2.1.1006' 'hormone metabolism.auxin' 'indoxyl-beta-d-glucoside' 'hormone metabolism.auxin' M
'17.2.1.1007' 'hormone metabolism.auxin' 'n-(3-indolylacetyl)-alanine' '' M
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold7617_14372-29756' '(at2g02560 : 1634.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1018.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3268.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold14967_21526-29594' '(at3g28970 : 258.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 99.2) no description available & (gnl|cdd|86365 : 94.9) no description available & (reliability: 516.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold19066_8130-16360' '(at5g35570 : 838.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 440.0) no description available & (reliability: 1676.0) & (original description: Putative At5g35570, Description = AT5g35570/K2K18_1, PFAM = PF10250)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold46642_8435-27609' '(at5g58440 : 545.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 209.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1086.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold51421_2897-7660' '(at5g16530 : 295.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 257.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 178.0) no description available & (reliability: 590.0) & (original description: Putative pin1, Description = PIN-like protein, PFAM = PF03547;PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold57335_2243-11640' '(at1g68370 : 284.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 148.0) no description available & (reliability: 568.0) & (original description: Putative ARG1, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold61337_2687-8622' '(at3g62980 : 967.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 172.0) no description available & (reliability: 1934.0) & (original description: Putative TIR1, Description = Protein TRANSPORT INHIBITOR RESPONSE 1, PFAM = PF12937)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold171_183280-194417' '(at5g07120 : 581.0) Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.; sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37484 : 212.0) no description available & (gnl|cdd|72740 : 85.7) no description available & (reliability: 1162.0) & (original description: Putative BnaC09g48300D, Description = BnaC09g48300D protein, PFAM = PF09325;PF00787)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold697_141463-146809' '(at5g16530 : 323.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 279.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 182.0) no description available & (reliability: 646.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547;PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold2076_339243-344672' '(at3g62980 : 878.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 154.0) no description available & (reliability: 1756.0) & (original description: Putative AFB1, Description = TIR1-like protein, PFAM = )' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold2459_47910-72441' '(at3g02260 : 2212.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 87.5) no description available & (reliability: 4424.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764;PF13764)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold4425_80588-85488' '(p33491|abp2_tobac : 369.0) Auxin-binding protein T92 precursor (ABP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85846 : 314.0) no description available & (at4g02980 : 267.0) Auxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2.; endoplasmic reticulum auxin binding protein 1 (ABP1); FUNCTIONS IN: auxin binding; INVOLVED IN: positive regulation of cell division, positive regulation of cell size, unidimensional cell growth, positive regulation of DNA endoreduplication, cytokinesis; LOCATED IN: endomembrane system, endoplasmic reticulum lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin-binding protein (InterPro:IPR000526), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 186 Blast hits to 186 proteins in 64 species: Archae - 10; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative T85, Description = Auxin-binding protein T85, PFAM = PF02041)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold8164_3127-15207' '(at1g05180 : 824.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 658.0) no description available & (gnl|cdd|73272 : 494.0) no description available & (reliability: 1648.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00000573ctg009_1-5692' '(at5g58440 : 556.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 199.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1108.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00003874ctg000_6416-11425' '(at5g16530 : 333.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 284.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 185.0) no description available & (reliability: 666.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547;PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00006496ctg004_7791-12292' '(q67ul3|pin1c_orysa : 760.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 753.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 168.0) no description available & (reliability: 1506.0) & (original description: Putative pin1, Description = Auxin efflux carrier, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00008560ctg001_31194-34002' '(at3g28970 : 120.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00009154ctg001_11165-32666' '(at3g02260 : 5723.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 144.0) no description available & (reliability: 11446.0) & (original description: Putative BIG, Description = Auxin transport protein BIG, PFAM = PF00569;PF13764)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00009154ctg002_1-1750' '(at3g02260 : 254.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00013859ctg005_3340-19444' '(at2g02560 : 1858.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1427.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3716.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00016941ctg008_1-7809' '(at3g28970 : 264.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 98.0) no description available & (gnl|cdd|86365 : 95.7) no description available & (reliability: 528.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00032054ctg003_16120-20637' '(at1g12820 : 904.0) Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.; auxin signaling F-box 3 (AFB3); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: auxin signaling F-box 2 (TAIR:AT3G26810.1); Has 2450 Blast hits to 1661 proteins in 170 species: Archae - 0; Bacteria - 4; Metazoa - 823; Fungi - 153; Plants - 1347; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37158 : 171.0) no description available & (reliability: 1808.0) & (original description: Putative AFB3, Description = Protein AUXIN SIGNALING F-BOX 3, PFAM = )' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00072_1033272-1039835' '(at5g16530 : 476.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 415.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 196.0) no description available & (reliability: 952.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00247_631416-634183' '(at3g62980 : 419.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 838.0) & (original description: Putative AFB1, Description = TIR1-like protein, PFAM = )' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00307_368993-397444' '(at1g68370 : 614.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 313.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1228.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00401_45248-64452' '(at5g58440 : 569.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 217.0) no description available & (gnl|cdd|85027 : 84.3) no description available & (reliability: 1126.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00505_452037-477106' '(at1g77110 : 635.0) Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux.; PIN-FORMED 6 (PIN6); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.1); Has 1564 Blast hits to 1346 proteins in 434 species: Archae - 34; Bacteria - 892; Metazoa - 10; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q67ul3|pin1c_orysa : 285.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (gnl|cdd|86363 : 151.0) no description available & (reliability: 1270.0) & (original description: Putative PIN6, Description = Auxin efflux carrier component 6, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00823_255907-261860' '(at3g62980 : 967.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 175.0) no description available & (reliability: 1934.0) & (original description: Putative TIR1, Description = Protein TRANSPORT INHIBITOR RESPONSE 1, PFAM = PF12937)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01101_265614-271484' '(q9fel7|lax2_medtr : 777.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 756.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 311.0) no description available & (gnl|cdd|85489 : 223.0) no description available & (reliability: 1364.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01222_88419-93963' '(at1g70940 : 874.0) A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.; PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (q5smq9|pin1_orysa : 697.0) Auxin efflux carrier component 1 (OsPIN1) (Ethylene insensitive root 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|86363 : 181.0) no description available & (reliability: 1748.0) & (original description: Putative PIN3, Description = Auxin efflux carrier component 3, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01326_87391-96295' '(at3g28970 : 261.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 99.2) no description available & (gnl|cdd|86365 : 94.9) no description available & (reliability: 522.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01409_1-5391' '(at5g57090 : 847.0) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.; ETHYLENE INSENSITIVE ROOT 1 (EIR1); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651v6|pin2_orysa : 680.0) Probable auxin efflux carrier component 2 (OsPIN2) - Oryza sativa (Rice) & (gnl|cdd|86363 : 173.0) no description available & (reliability: 1694.0) & (original description: Putative PIN2, Description = Auxin efflux carrier component 2, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01529_371526-378132' '(at3g62980 : 663.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 157.0) no description available & (reliability: 1326.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01777_290543-294363' '(at2g26170 : 734.0) Encodes a protein with similarity to thromboxane-A synthase, member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3,4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus, no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS, CHI, F3H, F3'H, FLS, DFR, ANS, UFGT, RT, AAC and GST).; "cytochrome P450, family 711, subfamily A, polypeptide 1" (CYP711A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: carotenoid biosynthetic process, positive regulation of flavonoid biosynthetic process, regulation of meristem structural organization, secondary shoot formation, auxin polar transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 33662 Blast hits to 33590 proteins in 1727 species: Archae - 52; Bacteria - 5395; Metazoa - 11559; Fungi - 6944; Plants - 8228; Viruses - 3; Other Eukaryotes - 1481 (source: NCBI BLink). & (gnl|cdd|35380 : 350.0) no description available & (gnl|cdd|84486 : 251.0) no description available & (o81973|c93a3_soybn : 108.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 1468.0) & (original description: Putative max1, Description = Cytochrome p450 family CYP711A member, PFAM = PF00067)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02508_676444-684316' '(at5g55540 : 1801.0) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.; TORNADO 1 (TRN1); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G10510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39509 : 96.7) no description available & (reliability: 3602.0) & (original description: Putative TRN1, Description = Protein TORNADO 1, PFAM = PF13516;PF13516;PF16095;PF08477)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02543_319022-342629' '(at1g05180 : 841.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 684.0) no description available & (gnl|cdd|73272 : 512.0) no description available & (reliability: 1682.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02658_202562-215982' '(at2g21050 : 793.0) Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.; like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8l883|lax5_medtr : 793.0) Auxin transporter-like protein 5 (AUX1-like protein 5) (MtLAX5) - Medicago truncatula (Barrel medic) & (gnl|cdd|36517 : 297.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1472.0) & (original description: Putative LAX5, Description = Auxin transporter-like protein 5, PFAM = PF01490)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf04292_33234-53558' '(at5g58440 : 581.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 210.0) no description available & (gnl|cdd|72740 : 84.9) no description available & (reliability: 1156.0) & (original description: Putative SNX2A, Description = Sorting nexin 2A, PFAM = PF00787;PF09325)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf05731_93-9891' '(at1g68370 : 605.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 311.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1210.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06090_321685-326635' '(at1g70940 : 842.0) A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.; PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (q67ul3|pin1c_orysa : 699.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (gnl|cdd|86363 : 174.0) no description available & (reliability: 1684.0) & (original description: Putative PIN3, Description = Auxin efflux carrier component 3, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06172_22852-26906' '(at5g15100 : 345.0) PIN-FORMED 8 (PIN8); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G16530.1); Has 2836 Blast hits to 2583 proteins in 784 species: Archae - 43; Bacteria - 1603; Metazoa - 103; Fungi - 0; Plants - 634; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 245.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 193.0) no description available & (reliability: 690.0) & (original description: Putative PIN8, Description = Auxin efflux carrier component 8, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06560_286582-312674' '(at3g02260 : 2217.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 87.5) no description available & (reliability: 4434.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764;PF13764;PF13764)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf07191_65646-72781' '(q9fel7|lax2_medtr : 761.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 746.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 296.0) no description available & (gnl|cdd|85489 : 211.0) no description available & (reliability: 1362.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf07400_195398-216469' '(at2g02560 : 1809.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1413.0) no description available & (gnl|cdd|72048 : 201.0) no description available & (reliability: 3618.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf08653_707792-713596' '(at1g73590 : 853.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (q5smq9|pin1_orysa : 838.0) Auxin efflux carrier component 1 (OsPIN1) (Ethylene insensitive root 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|86363 : 181.0) no description available & (reliability: 1706.0) & (original description: Putative pin1, Description = Auxin efflux carrier, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10031_422071-426866' '(q67ul3|pin1c_orysa : 759.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 755.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 168.0) no description available & (reliability: 1510.0) & (original description: Putative PIN1B, Description = Probable auxin efflux carrier component 1b, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10152_430822-442196' '(at5g58440 : 610.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 227.0) no description available & (gnl|cdd|72740 : 92.2) no description available & (reliability: 1218.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10628_104228-109840' '(at1g12820 : 888.0) Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.; auxin signaling F-box 3 (AFB3); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: auxin signaling F-box 2 (TAIR:AT3G26810.1); Has 2450 Blast hits to 1661 proteins in 170 species: Archae - 0; Bacteria - 4; Metazoa - 823; Fungi - 153; Plants - 1347; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37158 : 167.0) no description available & (reliability: 1776.0) & (original description: Putative AFB3, Description = Protein AUXIN SIGNALING F-BOX 3, PFAM = )' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf11741_10047-15987' '(at5g57090 : 822.0) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.; ETHYLENE INSENSITIVE ROOT 1 (EIR1); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651v6|pin2_orysa : 735.0) Probable auxin efflux carrier component 2 (OsPIN2) - Oryza sativa (Rice) & (gnl|cdd|86363 : 171.0) no description available & (reliability: 1644.0) & (original description: Putative PIN2, Description = Auxin efflux carrier component 2, PFAM = PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf13966_48356-53263' '(q67ul3|pin1c_orysa : 642.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 625.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 171.0) no description available & (reliability: 1250.0) & (original description: Putative pin3, Description = Putative plasma membrane intrinsic protein, PFAM = PF03547;PF03547)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf29588_46149-61010' '(at5g35570 : 835.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 440.0) no description available & (reliability: 1670.0) & (original description: Putative At5g35570, Description = AT5g35570/K2K18_1, PFAM = PF10250)' T
'17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf33211_15874-22575' '(q9fel6|lax3_medtr : 775.0) Auxin transporter-like protein 3 (AUX1-like protein 3) (MtLAX3) - Medicago truncatula (Barrel medic) & (at1g77690 : 770.0) Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.; like AUX1 3 (LAX3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 2 (TAIR:AT2G21050.1); Has 1212 Blast hits to 1207 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 294; Plants - 716; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|36517 : 298.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1540.0) & (original description: Putative LAX3, Description = Auxin transporter-like protein 3, PFAM = PF01490)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1129_89573-92058' '(at3g60690 : 130.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 260.0) & (original description: Putative RAG1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1360_11197-13484' '(gnl|cdd|66231 : 113.0) no description available & (at4g38840 : 105.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 100.0) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 210.0) & (original description: Putative SAUR, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1360_13486-15773' '(gnl|cdd|66231 : 112.0) no description available & (at5g18080 : 107.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33079|a10a5_soybn : 99.8) Auxin-induced protein 10A5 - Glycine max (Soybean) & (reliability: 214.0) & (original description: Putative BnaC01g03640D, Description = BnaC01g03640D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold3389_32641-34712' '(p33081|ax15a_soybn : 116.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 110.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold6637_9525-17700' '(at1g19220 : 683.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 147.0) no description available & (gnl|cdd|38804 : 80.1) no description available & (reliability: 1336.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = PF02362;PF02309;PF06507)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold7404_28800-48681' '(at4g34760 : 165.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 125.0) no description available & (p33081|ax15a_soybn : 84.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold18524_23631-26134' '(at1g29500 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold19074_365-3042' '(at3g60690 : 118.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 236.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold20588_14392-19134' '(at5g43830 : 385.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 359.0) no description available & (p24805|tsjt1_tobac : 134.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 770.0) & (original description: Putative At5g43830, Description = Aluminium induced protein with YGL and LRDR motifs, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold26253_23495-27877' '(at2g33310 : 175.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 162.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 140.0) no description available & (reliability: 350.0) & (original description: Putative IAA11, Description = Auxin-responsive protein, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold26559_16439-20016' '(at1g53700 : 517.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 496.0) no description available & (p47997|g11a_orysa : 334.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 236.0) no description available & (reliability: 1034.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold30992_11187-13621' '(at1g29500 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold42369_15746-18258' '(at3g60690 : 130.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 260.0) & (original description: Putative BnaC04g22040D, Description = BnaC04g22040D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold44113_4779-7847' '(at5g18020 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 238.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48023_6534-11459' '(at3g47620 : 123.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 246.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48037_1-2216' '(at3g25290 : 177.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 122.0) no description available & (gnl|cdd|68111 : 117.0) no description available & (reliability: 354.0) & (original description: Putative PGSC0003DMG400005415, Description = Auxin-induced in root cultures protein 12, putative, PFAM = PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48808_1-7913' '(at1g76270 : 691.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 524.0) no description available & (reliability: 1382.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold57834_5224-9501' '(p33081|ax15a_soybn : 114.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 104.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold60379_1-6659' '(at1g76270 : 677.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 510.0) no description available & (reliability: 1354.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold63758_1481-3735' '(at4g38840 : 115.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 113.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 107.0) no description available & (reliability: 230.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold77599_1411-7639' '(at1g14020 : 554.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 388.0) no description available & (reliability: 1108.0) & (original description: Putative BnaA01g33100D, Description = BnaA01g33100D protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold87006_4290-5918' '(at3g02250 : 187.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G15740.1); Has 830 Blast hits to 821 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 830; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 114.0) no description available & (reliability: 374.0) & (original description: Putative At2g03280, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold108888_872-3056' '(at1g14020 : 227.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 125.0) no description available & (reliability: 454.0) & (original description: Putative At1g22460, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold109047_401-2853' '(at1g29500 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold147918_1-1109' '(at1g29500 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative SAUR67, Description = Auxin-responsive protein SAUR67, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold199667_1-508' '(at1g29500 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative SAUR68, Description = Auxin-responsive protein SAUR68, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold451_303522-309813' '(at1g20550 : 708.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 536.0) no description available & (reliability: 1396.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold500_205898-209370' '(at5g43830 : 340.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 316.0) no description available & (p24805|tsjt1_tobac : 111.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 680.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold848_187282-193003' '(at2g33310 : 139.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 123.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 102.0) no description available & (reliability: 278.0) & (original description: Putative IAA10, Description = Auxin-responsive protein, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold907_77894-153807' '(at5g64600 : 580.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1160.0) & (original description: Putative Sb10g007565, Description = Putative uncharacterized protein Sb10g007565, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold967_35006-41999' '(at1g76270 : 684.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 510.0) no description available & (reliability: 1368.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1480_258041-279086' '(p33081|ax15a_soybn : 110.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 107.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 214.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1480_368005-435138' '(gnl|cdd|66231 : 111.0) no description available & (at4g38840 : 109.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 100.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 218.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1749_233143-235487' '(at2g37030 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 85.8) no description available & (reliability: 244.0) & (original description: Putative At2g37030, Description = Auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold2194_3375-27926' '(at4g24530 : 694.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 458.0) no description available & (reliability: 1354.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold2963_269221-271496' '(at5g18020 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 109.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 228.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold4059_197814-202934' '(at2g33310 : 222.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 166.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 142.0) no description available & (reliability: 444.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold4664_63231-66187' '(at5g47530 : 147.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68111 : 134.0) no description available & (gnl|cdd|39494 : 85.9) no description available & (reliability: 294.0) & (original description: Putative poni1, Description = Cytochrome b561/ferric reductase transmembrane, PFAM = PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold5436_68078-74904' '(at1g76270 : 603.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 504.0) no description available & (reliability: 1206.0) & (original description: Putative axi 1, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold6696_27349-32163' '(q6i581|gh35_orysa : 823.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 818.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 687.0) no description available & (reliability: 1636.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7420_38266-42302' '(at3g61750 : 333.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 184.0) no description available & (gnl|cdd|47940 : 91.1) no description available & (reliability: 666.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7598_2227-13194' '(at2g01480 : 901.0) O-fucosyltransferase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14970.1); Has 836 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 836; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1706.0) & (original description: Putative At2g01480, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7951_36185-39323' '(at5g20810 : 147.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 96.5) no description available & (reliability: 294.0) & (original description: Putative ARG7, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00000972ctg011_6715-9002' '(at5g18050 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 101.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 212.0) & (original description: Putative SAUR23, Description = Auxin-responsive protein SAUR23, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00002997ctg013_529-16069' '(at2g34680 : 1010.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 2020.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00004309ctg011_1-4864' '(at3g61750 : 344.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 180.0) no description available & (gnl|cdd|47940 : 83.7) no description available & (reliability: 688.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00010285ctg014_1-4020' '(q6i581|gh35_orysa : 826.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 818.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 688.0) no description available & (reliability: 1636.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00010285ctg014_97-2896' '(q6i581|gh35_orysa : 283.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 277.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 234.0) no description available & (reliability: 554.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00012460ctg032_17974-22823' '(at2g33310 : 174.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 158.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 348.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00014583ctg000_16238-18573' '(at5g50760 : 98.2) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative PGSC0003DMG400031744, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00019310ctg001_8439-16167' '(at4g24530 : 738.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 475.0) no description available & (reliability: 1430.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00022777ctg006_2756-5058' '(at4g34760 : 147.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 118.0) no description available & (p33080|ax10a_soybn : 80.9) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 294.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00031321ctg009_3867-6411' '(at1g29500 : 99.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00032027ctg002_5385-12437' '(at2g20120 : 405.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 188.0) no description available & (reliability: 810.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00035166ctg000_34741-40117' '(at5g47530 : 387.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 275.0) no description available & (gnl|cdd|68111 : 159.0) no description available & (reliability: 774.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00037185ctg003_1-3143' '(at3g61750 : 340.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 189.0) no description available & (gnl|cdd|47940 : 90.7) no description available & (reliability: 680.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00043717ctg010_779-2348' '(gnl|cdd|66231 : 105.0) no description available & (at4g38840 : 104.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 100.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 208.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00044874ctg005_868-9876' '(at3g26370 : 876.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 827 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 419.0) no description available & (reliability: 1752.0) & (original description: Putative At3g26370, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00045720ctg001_3143-6166' '(gnl|cdd|48483 : 284.0) no description available & (at3g22850 : 275.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1324 Blast hits to 1324 proteins in 483 species: Archae - 0; Bacteria - 791; Metazoa - 46; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p24805|tsjt1_tobac : 133.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 550.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00047914ctg000_3099-10132' '(at1g20550 : 669.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 522.0) no description available & (reliability: 1310.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048554ctg000_2131-4571' '(at1g75590 : 158.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 104.0) no description available & (reliability: 316.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048617ctg000_1-1829' '(at1g29500 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048617ctg000_5711-8264' '(at1g29500 : 129.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00051741ctg001_13830-18035' '(at5g54510 : 1074.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 868.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 829.0) no description available & (reliability: 2148.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00054691ctg004_96-3034' '(at2g46370 : 321.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (q6i581|gh35_orysa : 299.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (gnl|cdd|66963 : 272.0) no description available & (reliability: 642.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00054786ctg001_4533-7325' '(at2g21200 : 100.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18060.1); Has 1131 Blast hits to 1125 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1130; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (p33081|ax15a_soybn : 89.7) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 200.0) & (original description: Putative SAUR19, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00055090ctg002_1099-3401' '(at4g34760 : 151.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 121.0) no description available & (p33080|ax10a_soybn : 86.7) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 302.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00058528ctg000_1924-4132' '(at2g36210 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaC04g09120D, Description = BnaA05g08090D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00061515ctg000_1-2538' '(at5g20820 : 105.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg04390_1-620' '(at4g38840 : 103.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 90.4) no description available & (reliability: 206.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg08008_1-824' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg12790_1-1640' '(at2g36210 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.4) no description available & (reliability: 244.0) & (original description: Putative At2g36210, Description = Putative uncharacterized protein At2g36210/F2H17.18, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg16047_3238-5871' '(at2g28085 : 97.1) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 86.5) no description available & (reliability: 194.2) & (original description: Putative BnaA07g13610D, Description = BnaA07g13610D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00047_315503-327286' '(at1g60690 : 468.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 420.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 329.0) no description available & (gnl|cdd|31011 : 274.0) no description available & (reliability: 936.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00047_342152-345539' '(at1g60690 : 300.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 251.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 205.0) no description available & (gnl|cdd|31011 : 164.0) no description available & (reliability: 600.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_149925-200689' '(at5g18050 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 212.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_198402-274200' '(at5g18030 : 105.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33081|ax15a_soybn : 101.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 101.0) no description available & (reliability: 210.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_310286-312543' '(p33081|ax15a_soybn : 112.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_338541-340795' '(p33081|ax15a_soybn : 116.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 109.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 109.0) no description available & (reliability: 218.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_354084-356341' '(p33081|ax15a_soybn : 115.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_378812-381129' '(at1g75580 : 165.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G19830.1); Has 1403 Blast hits to 1386 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 129.0) no description available & (p33081|ax15a_soybn : 87.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_434011-436331' '(at4g34760 : 173.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 134.0) no description available & (p32295|arg7_phaau : 90.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 346.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_480655-483104' '(at1g75590 : 152.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 97.7) no description available & (reliability: 304.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00152_2323372-2325695' '(at4g34760 : 167.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 132.0) no description available & (p32295|arg7_phaau : 89.4) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 334.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00158_35053-37472' '(at4g34760 : 146.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 117.0) no description available & (p33080|ax10a_soybn : 84.7) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 292.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00159_663049-666257' '(at2g04850 : 528.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT3G25290.2); Has 646 Blast hits to 646 proteins in 111 species: Archae - 0; Bacteria - 4; Metazoa - 94; Fungi - 69; Plants - 456; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39494 : 257.0) no description available & (gnl|cdd|47940 : 102.0) no description available & (reliability: 1056.0) & (original description: Putative At2g04850, Description = Cytochrome b561 and DOMON domain-containing protein At2g04850, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00270_1440140-1448711' '(at1g60690 : 508.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 463.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 360.0) no description available & (gnl|cdd|31011 : 308.0) no description available & (reliability: 1016.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00416_80768-88793' '(gnl|cdd|39494 : 171.0) no description available & (at5g35735 : 169.0) Auxin-responsive family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT5G47530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47940 : 94.5) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400008512, Description = Auxin-responsive family protein, putative isoform 2, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00430_87642-103588' '(at1g17350 : 377.0) NADH:ubiquinone oxidoreductase intermediate-associated protein 30; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G72420.1); Has 442 Blast hits to 442 proteins in 172 species: Archae - 0; Bacteria - 91; Metazoa - 109; Fungi - 74; Plants - 102; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37646 : 219.0) no description available & (gnl|cdd|87565 : 150.0) no description available & (reliability: 754.0) & (original description: Putative At1g17350, Description = Probable complex I intermediate-associated protein 30, PFAM = PF08547)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00470_6327-36250' '(q6i581|gh35_orysa : 822.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 812.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 687.0) no description available & (reliability: 1624.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00470_8253-9870' '(q6i581|gh35_orysa : 280.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 275.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 233.0) no description available & (reliability: 550.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00508_581854-584171' '(at4g34760 : 171.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 87.4) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 342.0) & (original description: Putative SAUR12, Description = Auxin-induced protein TGSAUR12, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00527_553118-555603' '(at3g60690 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 256.0) & (original description: Putative RAG1, Description = Auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00542_237721-240789' '(at5g18020 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 238.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00578_309783-313919' '(at5g54510 : 886.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66963 : 757.0) no description available & (q8lqm5|gh31_orysa : 736.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (reliability: 1772.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00663_243487-256127' '(at5g47530 : 189.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 150.0) no description available & (gnl|cdd|47940 : 83.4) no description available & (reliability: 378.0) & (original description: Putative PGSC0003DMG400008512, Description = Auxin-responsive family protein, putative isoform 2, PFAM = PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00805_86051-88997' '(at5g20810 : 164.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 328.0) & (original description: Putative SAUR1, Description = Auxin-regulated protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00822_439106-444262' '(at3g54100 : 626.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 847 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 434.0) no description available & (reliability: 1252.0) & (original description: Putative Os12g0190100, Description = Os12g0190100 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00875_719505-721939' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative SAUR61, Description = Auxin-responsive protein SAUR61, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00875_787204-789611' '(at1g29500 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00876_295732-300298' '(at3g61750 : 340.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 184.0) no description available & (gnl|cdd|47940 : 90.7) no description available & (reliability: 680.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03351;PF03188)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00914_308833-311324' '(at3g43120 : 92.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G20810.1); Has 1460 Blast hits to 1446 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1459; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 84.2) no description available & (reliability: 184.0) & (original description: Putative PGSC0003DMG400020701, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00956_94498-96857' '(at2g28085 : 89.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.8) no description available & (reliability: 178.0) & (original description: Putative PGSC0003DMG400007162, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00956_94522-97105' '(at2g28085 : 97.1) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.4) no description available & (reliability: 194.2) & (original description: Putative BnaA07g13610D, Description = BnaA07g13610D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00981_546403-555018' '(at1g19220 : 598.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1146.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF02309;PF02362;PF06507)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01008_155693-158857' '(gnl|cdd|69106 : 115.0) no description available & (at1g28330 : 113.0) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (q05349|12kd_fraan : 102.0) Auxin-repressed 12.5 kDa protein - Fragaria ananassa (Strawberry) & (reliability: 206.0) & (original description: Putative DRMH1, Description = Dormancy-associated protein homolog 1, PFAM = PF05564)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01037_992345-1004561' '(at5g47530 : 402.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 262.0) no description available & (gnl|cdd|68111 : 162.0) no description available & (reliability: 804.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01061_317742-350729' '(at2g34680 : 2033.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 4066.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01076_71655-77456' '(q6i581|gh35_orysa : 839.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 817.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 691.0) no description available & (reliability: 1634.0) & (original description: Putative BRU6, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01192_895553-900746' '(at4g03400 : 833.0) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.; DWARF IN LIGHT 2 (DFL2); INVOLVED IN: response to auxin stimulus, response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT2G46370.4); Has 1425 Blast hits to 1352 proteins in 234 species: Archae - 0; Bacteria - 486; Metazoa - 52; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|66963 : 631.0) no description available & (q6i581|gh35_orysa : 602.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (reliability: 1666.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01278_628165-630551' '(at3g12830 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.2) no description available & (reliability: 264.0) & (original description: Putative SAUR72, Description = Auxin-responsive protein SAUR72, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01372_1032706-1037658' '(at1g60750 : 269.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink). & (gnl|cdd|36788 : 245.0) no description available & (p49249|in22_maize : 243.0) IN2-2 protein - Zea mays (Maize) & (gnl|cdd|31011 : 236.0) no description available & (reliability: 538.0) & (original description: Putative yhdN, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01463_108354-111034' '(gnl|cdd|66231 : 97.3) no description available & (at4g31320 : 80.5) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G24400.1); Has 1341 Blast hits to 1332 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1340; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative BnaA01g05940D, Description = BnaA01g05940D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01524_23605-25943' '(at3g61900 : 94.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1394 Blast hits to 1380 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1393; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 87.3) no description available & (reliability: 188.0) & (original description: Putative SAUR22, Description = Auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01528_127659-130165' '(at4g12410 : 115.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G22620.1); Has 1137 Blast hits to 1128 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 230.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01528_179635-182120' '(at3g60690 : 127.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 98.9) no description available & (reliability: 254.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01546_116231-121285' '(at2g44500 : 688.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G07900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1272.0) & (original description: Putative At2g44500, Description = Axi 1 protein-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01604_32167-37288' '(at5g54510 : 899.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 728.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 717.0) no description available & (reliability: 1798.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01685_750702-755323' '(at5g54510 : 964.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 844.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 802.0) no description available & (reliability: 1928.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01696_716439-723751' '(at1g60680 : 393.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 31100 Blast hits to 31077 proteins in 2588 species: Archae - 657; Bacteria - 20302; Metazoa - 1863; Fungi - 2395; Plants - 1353; Viruses - 0; Other Eukaryotes - 4530 (source: NCBI BLink). & (p40691|a115_tobac : 349.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 334.0) no description available & (gnl|cdd|31011 : 311.0) no description available & (reliability: 786.0) & (original description: Putative PR, Description = Perakine reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01702_588719-591141' '(at1g75590 : 150.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.8) no description available & (reliability: 300.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01728_206844-209176' '(at3g12830 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 93.8) no description available & (reliability: 250.0) & (original description: Putative SAUR40, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_397994-400428' '(at1g29510 : 110.0) SMALL AUXIN UPREGULATED 68 (SAUR68); CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 748 Blast hits to 732 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative SAUR64, Description = Auxin-responsive protein SAUR64, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_425705-426980' '(at1g29500 : 134.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_428898-431428' '(at1g29450 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 675 Blast hits to 661 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SAUR64, Description = Auxin-responsive protein SAUR64, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01852_252130-254435' '(at4g34770 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 115.0) no description available & (p32295|arg7_phaau : 109.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 256.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01852_403671-405988' '(at2g21220 : 168.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 82.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 336.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01941_84960-89078' '(at4g27450 : 325.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48483 : 320.0) no description available & (p24805|tsjt1_tobac : 111.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 650.0) & (original description: Putative At4g27450, Description = AT4g27450/F27G19_50, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01943_814080-819215' '(at5g47530 : 393.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 288.0) no description available & (gnl|cdd|68111 : 170.0) no description available & (reliability: 786.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF04526;PF03188)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01953_3658-6029' '(at4g00880 : 104.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 90.4) no description available & (reliability: 208.0) & (original description: Putative AAM1, Description = Auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01980_1343733-1350973' '(at1g22460 : 684.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 477.0) no description available & (reliability: 1368.0) & (original description: Putative At1g22460, Description = At1g22460, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02071_55751-58095' '(at4g00880 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 228.0) & (original description: Putative SAUR59, Description = SAUR59, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02278_10853-17905' '(at2g20120 : 404.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 188.0) no description available & (reliability: 808.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02289_54114-62639' '(at3g30300 : 806.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G03810.1); Has 982 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 283.0) no description available & (reliability: 1612.0) & (original description: Putative At3g30300, Description = At3g30300, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02337_45989-49317' '(at3g47620 : 141.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 282.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02340_87925-92406' '(gnl|cdd|48483 : 335.0) no description available & (at4g27450 : 327.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p24805|tsjt1_tobac : 113.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 654.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02366_97666-102874' '(at2g18460 : 301.0) like COV 3 (LCV3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86633 : 158.0) no description available & (reliability: 566.0) & (original description: Putative COV1, Description = Like-COV protein, PFAM = PF04367)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02367_657452-665056' '(at1g22460 : 671.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 483.0) no description available & (reliability: 1342.0) & (original description: Putative At1g22460, Description = At1g22460, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02367_659747-662963' '(at1g22460 : 347.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 293.0) no description available & (reliability: 694.0) & (original description: Putative At1g22460, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02437_431685-434068' '(at5g20820 : 108.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02437_500449-504051' '(at5g20810 : 152.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.6) no description available & (reliability: 304.0) & (original description: Putative SAUR1, Description = Auxin-regulated protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02530_935417-946080' '(at1g19220 : 588.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1142.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02309;PF02362;PF06507)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02632_512011-516856' '(at5g15740 : 742.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 481.0) no description available & (reliability: 1470.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_475162-477449' '(gnl|cdd|66231 : 118.0) no description available & (at2g21210 : 117.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 234.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_490592-502287' '(at4g38840 : 105.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (p33081|ax15a_soybn : 93.6) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 210.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_528928-530700' '(gnl|cdd|66231 : 101.0) no description available & (at4g38840 : 99.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p32295|arg7_phaau : 95.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 198.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02736_649579-659156' '(at3g03810 : 749.0) embryo sac development arrest 30 (EDA30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, polar nucleus fusion, pollen tube development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G30300.1); Has 810 Blast hits to 792 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 341.0) no description available & (reliability: 1498.0) & (original description: Putative EDA30, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02864_1069260-1071568' '(at4g34760 : 153.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 124.0) no description available & (p33080|ax10a_soybn : 82.4) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 306.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03105_148010-155256' '(at5g65470 : 730.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 472.0) no description available & (reliability: 1460.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03329_19357-24830' '(at2g37980 : 705.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 466.0) no description available & (reliability: 1410.0) & (original description: Putative PGSC0003DMG400011089, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03374_465558-468070' '(at3g60690 : 134.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 268.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03488_771176-778169' '(at1g76270 : 671.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 500.0) no description available & (reliability: 1342.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03540_66045-74827' '(at1g19220 : 596.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 142.0) no description available & (reliability: 1152.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02362;PF06507;PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03551_158625-163508' '(at5g15740 : 770.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 490.0) no description available & (reliability: 1508.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03735_420254-422556' '(at4g34760 : 144.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 125.0) no description available & (p33080|ax10a_soybn : 84.3) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 288.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03764_62485-64805' '(at4g34760 : 175.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 134.0) no description available & (p32295|arg7_phaau : 90.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 350.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03856_202922-205254' '(at3g12830 : 133.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 96.5) no description available & (reliability: 266.0) & (original description: Putative SAUR72, Description = Auxin-responsive protein SAUR72, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04090_41972-46631' '(at2g37030 : 136.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 81.9) no description available & (reliability: 272.0) & (original description: Putative BnaC08g24350D, Description = BnaC08g24350D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04219_82909-85595' '(at2g24400 : 110.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G31320.1); Has 1369 Blast hits to 1358 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.2) no description available & (reliability: 220.0) & (original description: Putative BnaA01g05940D, Description = BnaA01g05940D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04290_157670-161293' '(at3g47620 : 165.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 111.0) no description available & (reliability: 330.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04334_296428-298821' '(at4g34760 : 145.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 120.0) no description available & (reliability: 290.0) & (original description: Putative SAUR, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04377_309244-312821' '(at1g53700 : 511.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 494.0) no description available & (p47997|g11a_orysa : 335.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 235.0) no description available & (reliability: 1022.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04392_17176-19673' '(at3g43120 : 88.6) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G20810.1); Has 1460 Blast hits to 1446 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1459; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 81.9) no description available & (reliability: 177.2) & (original description: Putative PGSC0003DMG400020701, Description = Os09g0437400 protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04765_36421-40005' '(gnl|cdd|48483 : 323.0) no description available & (p24805|tsjt1_tobac : 304.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (at4g27450 : 223.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At3g15450, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04779_108274-118874' '(at3g60690 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 228.0) & (original description: Putative BnaC02g46720D, Description = BnaC02g46720D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04779_116389-118887' '(at3g60690 : 115.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 230.0) & (original description: Putative RAG1, Description = Auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_106841-109146' '(at4g34770 : 127.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 116.0) no description available & (p32295|arg7_phaau : 111.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 254.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_124530-126883' '(at4g38840 : 101.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p32295|arg7_phaau : 100.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (gnl|cdd|66231 : 100.0) no description available & (reliability: 202.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_129899-132214' '(gnl|cdd|66231 : 101.0) no description available & (at4g38840 : 98.2) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 90.5) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 196.4) & (original description: Putative SAUR19, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04872_94743-111163' '(at5g64600 : 672.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 455.0) no description available & (reliability: 1344.0) & (original description: Putative At5g64600, Description = Auxin-independent growth promoter-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04887_76464-81264' '(at1g60710 : 565.0) Encodes ATB2.; ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). & (p40691|a115_tobac : 553.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 376.0) no description available & (gnl|cdd|31011 : 295.0) no description available & (reliability: 1130.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04979_353778-356401' '(at5g50760 : 92.8) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative SAUR2, Description = Calmodulin binding protein, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05131_2062-4511' '(at1g29500 : 126.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05152_168496-171342' '(at3g25290 : 180.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 120.0) no description available & (gnl|cdd|68111 : 120.0) no description available & (reliability: 360.0) & (original description: Putative BnaAnng17240D, Description = BnaAnng17240D protein, PFAM = PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05152_340109-344044' '(at3g25290 : 426.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 317.0) no description available & (gnl|cdd|68111 : 132.0) no description available & (reliability: 852.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05226_222832-230915' '(at1g76270 : 687.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 521.0) no description available & (reliability: 1374.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05229_198307-201380' '(at1g69690 : 150.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 120; Fungi - 15; Plants - 698; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 278.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05298_32152-37912' '(at2g37980 : 734.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 471.0) no description available & (reliability: 1468.0) & (original description: Putative BnaA09g34020D, Description = BnaA09g34020D protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05442_196758-199102' '(at2g37030 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 85.8) no description available & (reliability: 256.0) & (original description: Putative BnaC08g24350D, Description = BnaC08g24350D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05584_116928-122728' '(q6i581|gh35_orysa : 807.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 783.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 670.0) no description available & (reliability: 1566.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05712_198576-205269' '(at1g14020 : 763.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 511.0) no description available & (reliability: 1526.0) & (original description: Putative At2g03280, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05846_40594-42842' '(p33081|ax15a_soybn : 112.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at5g18030 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 110.0) no description available & (reliability: 222.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05846_158128-160427' '(at4g34770 : 139.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p32295|arg7_phaau : 113.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 278.0) & (original description: Putative ARG7, Description = Indole-3-acetic acid-induced protein ARG7, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05929_382475-391160' '(at2g33310 : 213.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 167.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 137.0) no description available & (reliability: 426.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06283_11586-18338' '(p40691|a115_tobac : 600.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (at1g60710 : 553.0) Encodes ATB2.; ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). & (gnl|cdd|36788 : 370.0) no description available & (gnl|cdd|31011 : 302.0) no description available & (reliability: 1106.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06357_183296-189891' '(at1g20550 : 710.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 540.0) no description available & (reliability: 1396.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06413_316061-318513' '(at1g29500 : 123.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06461_778679-781065' '(at5g20820 : 113.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA02g05100D, Description = BnaA02g05100D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06525_74002-79494' '(at3g25290 : 367.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 298.0) no description available & (gnl|cdd|68111 : 125.0) no description available & (reliability: 734.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF04526;PF03188)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06530_43719-46162' '(at5g50760 : 92.8) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 88.1) no description available & (reliability: 185.6) & (original description: Putative SAUR2, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06674_377915-386810' '(at3g30300 : 773.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G03810.1); Has 982 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 275.0) no description available & (reliability: 1546.0) & (original description: Putative EDA30, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06739_36246-39729' '(at5g20810 : 121.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.8) no description available & (reliability: 242.0) & (original description: Putative ARG7, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06933_57439-59819' '(at5g20820 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07157_83289-85603' '(at4g34760 : 170.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 127.0) no description available & (p33081|ax15a_soybn : 85.1) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 340.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07160_56653-58907' '(p33081|ax15a_soybn : 117.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 114.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 228.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07423_312898-315532' '(at1g29500 : 124.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative aux2, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07423_315868-320208' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07428_20453-23840' '(at3g07390 : 131.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; Auxin-Induced in Root cultures 12 (AIR12); FUNCTIONS IN: extracellular matrix structural constituent; INVOLVED IN: response to auxin stimulus, lateral root morphogenesis, extracellular matrix organization; LOCATED IN: extracellular region, anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT3G25290.2); Has 254 Blast hits to 254 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 248; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|68111 : 107.0) no description available & (gnl|cdd|39494 : 106.0) no description available & (reliability: 262.0) & (original description: Putative AIR12, Description = Auxin-induced in root cultures protein 12, putative, PFAM = PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07465_394202-396642' '(at1g75590 : 160.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 320.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07527_332358-339749' '(at4g03400 : 837.0) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.; DWARF IN LIGHT 2 (DFL2); INVOLVED IN: response to auxin stimulus, response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT2G46370.4); Has 1425 Blast hits to 1352 proteins in 234 species: Archae - 0; Bacteria - 486; Metazoa - 52; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|66963 : 648.0) no description available & (q6i581|gh35_orysa : 604.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (reliability: 1674.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07590_821837-832675' '(at3g26370 : 835.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 827 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 388.0) no description available & (reliability: 1670.0) & (original description: Putative At3g26370, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07829_542568-547599' '(at3g47620 : 122.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 244.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08091_21341-39462' '(p33081|ax15a_soybn : 113.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 107.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08141_122444-124886' '(at1g29500 : 107.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08151_86158-93497' '(at2g20120 : 405.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 187.0) no description available & (reliability: 810.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08206_299964-302401' '(at2g46690 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G61900.1); Has 1291 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1290; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.0) no description available & (reliability: 212.0) & (original description: Putative SAUR59, Description = SAUR59, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08330_149524-154491' '(at2g44500 : 677.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G07900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 433.0) no description available & (reliability: 1268.0) & (original description: Putative At2g44500, Description = Axi 1 protein-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08419_269661-273377' '(gnl|cdd|48483 : 322.0) no description available & (p24805|tsjt1_tobac : 303.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (at4g27450 : 221.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative At3g15450, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08687_31767-38154' '(at5g54510 : 959.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 845.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 799.0) no description available & (reliability: 1918.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08690_1-3144' '(at3g61750 : 316.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 187.0) no description available & (gnl|cdd|47940 : 89.5) no description available & (reliability: 632.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08979_5441-7695' '(p33081|ax15a_soybn : 118.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 114.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 111.0) no description available & (reliability: 228.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08979_51210-55438' '(p33081|ax15a_soybn : 115.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09010_408540-410854' '(at4g34760 : 172.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 133.0) no description available & (p32295|arg7_phaau : 88.6) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 344.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09387_383162-385647' '(at3g60690 : 117.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 234.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09387_476721-479230' '(at3g60690 : 116.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 232.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09665_81929-84411' '(at3g60690 : 133.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (reliability: 266.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09951_145359-147727' '(at3g61900 : 109.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1394 Blast hits to 1380 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1393; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 97.7) no description available & (reliability: 218.0) & (original description: Putative BnaC08g31820D, Description = BnaC08g31820D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10465_6732-11390' '(at2g47750 : 808.0) Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.; putative indole-3-acetic acid-amido synthetase GH3.9 (GH3.9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; LOCATED IN: chloroplast envelope; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G28130.1); Has 1429 Blast hits to 1301 proteins in 228 species: Archae - 0; Bacteria - 485; Metazoa - 53; Fungi - 2; Plants - 681; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|66963 : 743.0) no description available & (p0c0m3|gh311_orysa : 733.0) Probable indole-3-acetic acid-amido synthetase GH3.11 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 11) (OsGH3-11) - Oryza sativa (Rice) & (reliability: 1616.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10763_31816-35297' '(at4g27450 : 407.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48483 : 348.0) no description available & (p24805|tsjt1_tobac : 108.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 814.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10940_387817-390857' '(at5g43830 : 383.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 358.0) no description available & (p24805|tsjt1_tobac : 134.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 766.0) & (original description: Putative At3g22850, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11178_266992-271191' '(at2g14960 : 968.0) encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.; GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (p0c0m2|gh32_orysa : 898.0) Probable indole-3-acetic acid-amido synthetase GH3.2 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 2) (OsGH3-2) - Oryza sativa (Rice) & (gnl|cdd|66963 : 816.0) no description available & (reliability: 1936.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11515_64581-73836' '(at4g24530 : 738.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 469.0) no description available & (reliability: 1462.0) & (original description: Putative BnaC01g16360D, Description = BnaC01g16360D protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11535_200388-205788' '(at2g33310 : 179.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 161.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 358.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11621_14695-17009' '(gnl|cdd|66231 : 107.0) no description available & (at2g21210 : 104.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 103.0) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 208.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf12498_11485-13937' '(at1g29450 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 675 Blast hits to 661 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf12498_13244-15519' '(at2g21210 : 113.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 226.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13270_350053-354154' '(at5g54510 : 1067.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 869.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 828.0) no description available & (reliability: 2134.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13621_116064-121792' '(at3g61750 : 332.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 177.0) no description available & (gnl|cdd|47940 : 83.7) no description available & (reliability: 664.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13856_85518-87793' '(at2g36210 : 117.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative BnaC04g09120D, Description = BnaA05g08090D protein, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf16733_27080-31749' '(at5g15740 : 752.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 488.0) no description available & (reliability: 1488.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf18589_73919-78755' '(at5g47530 : 407.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 281.0) no description available & (gnl|cdd|68111 : 150.0) no description available & (reliability: 814.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf18771_24355-29826' '(at2g37980 : 708.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 464.0) no description available & (reliability: 1416.0) & (original description: Putative BnaA09g34020D, Description = BnaA09g34020D protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf19230_266646-270773' '(at5g63390 : 669.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 826 Blast hits to 816 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 379.0) no description available & (reliability: 1338.0) & (original description: Putative At5g63390, Description = Auxin-independent growth promoter-like protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21415_1-6512' '(at1g20550 : 676.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 514.0) no description available & (reliability: 1322.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21689_53492-55821' '(at2g21220 : 164.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 124.0) no description available & (p33081|ax15a_soybn : 81.3) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 328.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21689_117924-120247' '(at2g21220 : 168.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 82.8) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 336.0) & (original description: Putative SAUR21, Description = Auxin-induced protein TGSAUR21, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf22940_10402-16455' '(q6i581|gh35_orysa : 825.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 809.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 678.0) no description available & (reliability: 1618.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf25073_210974-212989' '(at5g20820 : 104.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf25772_1-606' '(at1g29500 : 120.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T
'17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf31173_60910-65155' '(at2g14960 : 985.0) encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.; GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (q7xin9|gh38_orysa : 910.0) Probable indole-3-acetic acid-amido synthetase GH3.8 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 8) (OsGH3-8) - Oryza sativa (Rice) & (gnl|cdd|66963 : 839.0) no description available & (reliability: 1970.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T
'17.3' 'hormone metabolism.brassinosteroid' '' ''
'17.3.1' 'hormone metabolism.brassinosteroid.synthesis-degradation' '' ''
'17.3.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs' '' ''
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben044scf00017688ctg003_7969-10709' '(at2g38050 : 290.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 227.0) no description available & (gnl|cdd|66254 : 150.0) no description available & (reliability: 580.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf00466_353267-360873' '(at2g16530 : 353.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT1G72590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36853 : 220.0) no description available & (reliability: 706.0) & (original description: Putative At2g16530, Description = Polyprenol reductase 2, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf00624_16438-23591' '(at5g16010 : 254.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 158.0) no description available & (gnl|cdd|66254 : 93.4) no description available & (reliability: 508.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf04738_376989-380802' '(at5g16010 : 306.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 186.0) no description available & (gnl|cdd|66254 : 93.4) no description available & (reliability: 612.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf09123_129329-132438' '(at2g38050 : 292.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 229.0) no description available & (gnl|cdd|66254 : 152.0) no description available & (reliability: 584.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf10919_112895-131739' '(at2g16530 : 340.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT1G72590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36853 : 218.0) no description available & (reliability: 680.0) & (original description: Putative OsI_17065, Description = Polyprenol reductase 1, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf14562_15045-17809' '(at2g38050 : 253.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 217.0) no description available & (gnl|cdd|66254 : 141.0) no description available & (reliability: 506.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T
'17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf25231_16198-19786' '(at5g16010 : 251.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 176.0) no description available & (gnl|cdd|66254 : 94.9) no description available & (reliability: 502.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'nbv0.5scaffold3490_20830-26355' '(q6f4f5|c724b_orysa : 415.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 344.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 214.0) no description available & (gnl|cdd|84486 : 147.0) no description available & (reliability: 688.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'nbv0.5scaffold3490_20854-26182' '(q6f4f5|c724b_orysa : 349.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at5g14400 : 315.0) member of CYP724A; "cytochrome P450, family 724, subfamily A, polypeptide 1" (CYP724A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 22938 Blast hits to 22894 proteins in 1383 species: Archae - 43; Bacteria - 3025; Metazoa - 8566; Fungi - 3762; Plants - 6637; Viruses - 3; Other Eukaryotes - 902 (source: NCBI BLink). & (gnl|cdd|35379 : 182.0) no description available & (gnl|cdd|32307 : 119.0) no description available & (reliability: 584.0) & (original description: Putative D11, Description = Cytochrome P450 724B1, PFAM = PF00067;PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf03693_218175-225641' '(at3g50660 : 699.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 409.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|35379 : 291.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (reliability: 1398.0) & (original description: Putative CYP90B1, Description = Cytochrome P450 90B1, PFAM = PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf07234_70945-76675' '(q6f4f5|c724b_orysa : 635.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 410.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (reliability: 820.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_12312-18510' '(q6f4f5|c724b_orysa : 473.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 402.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 244.0) no description available & (gnl|cdd|84486 : 158.0) no description available & (reliability: 804.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_20992-26720' '(q6f4f5|c724b_orysa : 439.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 360.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 156.0) no description available & (reliability: 720.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_21865-26544' '(q6f4f5|c724b_orysa : 316.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 278.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 176.0) no description available & (gnl|cdd|84486 : 129.0) no description available & (reliability: 556.0) & (original description: Putative D11, Description = Cytochrome P450 90B1, PFAM = PF00067)' T
'17.3.1.1.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.CPD' 'niben044scf00047157ctg003_6397-15414' '(at5g05690 : 661.0) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.; CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 33335 Blast hits to 33282 proteins in 1705 species: Archae - 54; Bacteria - 6996; Metazoa - 10729; Fungi - 6001; Plants - 7974; Viruses - 3; Other Eukaryotes - 1578 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 330.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 281.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (reliability: 1322.0) & (original description: Putative CYP90A1, Description = Cytochrome P450 90A1, PFAM = PF00067)' T
'17.3.1.1.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.CPD' 'niben101scf04044_707946-716300' '(at5g05690 : 674.0) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.; CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 33335 Blast hits to 33282 proteins in 1705 species: Archae - 54; Bacteria - 6996; Metazoa - 10729; Fungi - 6001; Plants - 7974; Viruses - 3; Other Eukaryotes - 1578 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 335.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 289.0) no description available & (gnl|cdd|84486 : 168.0) no description available & (reliability: 1348.0) & (original description: Putative CYP90A1, Description = Cytochrome P450 90A1, PFAM = PF00067;PF00067)' T
'17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf02732_138089-142743' '(q69f95|c85a_phavu : 772.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 677.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 272.0) no description available & (gnl|cdd|84486 : 176.0) no description available & (reliability: 1354.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf05618_412337-416812' '(q69f95|c85a_phavu : 775.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 679.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (reliability: 1358.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf14390_191378-197460' '(q69f95|c85a_phavu : 725.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g30180 : 649.0) Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.; brassinosteroid-6-oxidase 2 (BR6OX2); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: response to light stimulus, circadian rhythm, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 1 (TAIR:AT5G38970.1); Has 29372 Blast hits to 29308 proteins in 1622 species: Archae - 48; Bacteria - 4489; Metazoa - 10449; Fungi - 5456; Plants - 7735; Viruses - 3; Other Eukaryotes - 1192 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (reliability: 1294.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben044scf00038148ctg006_1-1765' '(at1g75130 : 175.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 160.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 144.0) no description available & (gnl|cdd|84486 : 111.0) no description available & (reliability: 330.0) & (original description: Putative BAS1, Description = Secologanin synthase, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00163_1968387-1971367' '(gnl|cdd|36797 : 270.0) no description available & (at1g13420 : 243.0) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment.; sulfotransferase 4B (ST4B); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2771 Blast hits to 2728 proteins in 191 species: Archae - 0; Bacteria - 215; Metazoa - 1679; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|84950 : 200.0) no description available & (reliability: 444.0) & (original description: Putative SOT8, Description = Cytosolic sulfotransferase 8, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00637_369607-372629' '(gnl|cdd|36797 : 329.0) no description available & (at5g07010 : 325.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 217.0) no description available & (reliability: 634.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 422.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 416.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf03173_142474-147086' '(at2g26710 : 365.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 330.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (reliability: 730.0) & (original description: Putative cytochrome P450 CYP866A1, Description = Cytochrome P450 protein, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 506.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf04438_213311-216315' '(gnl|cdd|36797 : 353.0) no description available & (at2g03760 : 328.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|84950 : 231.0) no description available & (reliability: 656.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf08341_264202-270431' '(at2g26710 : 773.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 394.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 244.0) no description available & (reliability: 1546.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf09172_314487-321414' '(at1g75130 : 504.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 358.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 227.0) no description available & (reliability: 914.0) & (original description: Putative Sb09g019950, Description = Putative uncharacterized protein Sb09g019950, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf15077_235375-240334' '(at2g26710 : 677.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 397.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 257.0) no description available & (reliability: 1354.0) & (original description: Putative cytochrome P450 CYP866D1, Description = Cytochrome P450 CYP866D1, PFAM = PF00067)' T
'17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf24053_19310-22308' '(at2g03760 : 342.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|36797 : 337.0) no description available & (gnl|cdd|84950 : 223.0) no description available & (reliability: 684.0) & (original description: Putative SOT12, Description = Cytosolic sulfotransferase 12, PFAM = PF00685)' T
'17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf02732_138089-142743' '(q69f95|c85a_phavu : 772.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 677.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 272.0) no description available & (gnl|cdd|84486 : 176.0) no description available & (reliability: 1346.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf03778_95115-102867' '(at3g13730 : 636.0) Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).; "cytochrome P450, family 90, subfamily D, polypeptide 1" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 636.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 253.0) no description available & (gnl|cdd|32307 : 154.0) no description available & (reliability: 1272.0) & (original description: Putative CYP90D1, Description = 3-epi-6-deoxocathasterone 23-monooxygenase, PFAM = PF00067)' T
'17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf05618_412337-416812' '(q69f95|c85a_phavu : 775.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 679.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (reliability: 1350.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf05764_438682-447370' '(at4g36380 : 605.0) Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).; ROTUNDIFOLIA 3 (ROT3); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 459.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 263.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (reliability: 1210.0) & (original description: Putative ROT3, Description = 3-epi-6-deoxocathasterone 23-monooxygenase, PFAM = PF00067)' T
'17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf14390_191378-197460' '(q69f95|c85a_phavu : 725.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g30180 : 649.0) Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.; brassinosteroid-6-oxidase 2 (BR6OX2); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: response to light stimulus, circadian rhythm, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 1 (TAIR:AT5G38970.1); Has 29372 Blast hits to 29308 proteins in 1622 species: Archae - 48; Bacteria - 4489; Metazoa - 10449; Fungi - 5456; Plants - 7735; Viruses - 3; Other Eukaryotes - 1192 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (reliability: 1298.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T
'17.3.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols' '' ''
'17.3.1.2.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT1' '' ''
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'nbv0.5scaffold196_940136-957055' '(at5g13710 : 504.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (q6zix2|smt1_orysa : 495.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|36483 : 257.0) no description available & (gnl|cdd|71926 : 157.0) no description available & (reliability: 1008.0) & (original description: Putative SMT1, Description = Cycloartenol-C-24-methyltransferase, PFAM = PF08498;PF08241)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00634_494219-498095' '(at1g20330 : 619.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 559.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 323.0) no description available & (gnl|cdd|71926 : 167.0) no description available & (reliability: 1238.0) & (original description: Putative erg6, Description = Methyltransferase, PFAM = PF08241;PF08498)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00735_653805-671946' '(at5g13710 : 530.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (q6zix2|smt1_orysa : 520.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|36483 : 269.0) no description available & (gnl|cdd|71926 : 189.0) no description available & (reliability: 1060.0) & (original description: Putative SMT1, Description = Cycloartenol-C-24-methyltransferase, PFAM = PF08241;PF08498)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00780_185717-188787' '(at1g20330 : 600.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 541.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 309.0) no description available & (gnl|cdd|71926 : 164.0) no description available & (reliability: 1200.0) & (original description: Putative erg6, Description = Methyltransferase, PFAM = PF08498;PF08241)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf01718_763993-767063' '(at1g20330 : 634.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 558.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 330.0) no description available & (gnl|cdd|71926 : 177.0) no description available & (reliability: 1268.0) & (original description: Putative SMT2, Description = 24-methylenesterol C-methyltransferase 2, PFAM = PF08498;PF08241)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf03085_519205-524231' '(q6zix2|smt1_orysa : 531.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 528.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (gnl|cdd|36483 : 273.0) no description available & (gnl|cdd|71926 : 197.0) no description available & (reliability: 1056.0) & (original description: Putative smt1, Description = Delta(24)-sterol C-methyltransferase, PFAM = PF08241;PF08498)' T
'17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf13874_115584-128972' '(q6zix2|smt1_orysa : 565.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 551.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (gnl|cdd|36483 : 297.0) no description available & (gnl|cdd|71926 : 208.0) no description available & (reliability: 1102.0) & (original description: Putative erg6, Description = Delta(24)-sterol C-methyltransferase, PFAM = PF08241;PF08498)' T
'17.3.1.2.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51' 'niben044scf00011533ctg001_274-4664' '(at1g11680 : 786.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (p93846|cp51_sorbi : 759.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35903 : 544.0) no description available & (gnl|cdd|84486 : 187.0) no description available & (reliability: 1572.0) & (original description: Putative CYP51G1, Description = Sterol 14-demethylase, PFAM = PF00067)' T
'17.3.1.2.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51' 'niben101scf09097_78038-82278' '(at1g11680 : 784.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (p93846|cp51_sorbi : 758.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35903 : 542.0) no description available & (gnl|cdd|84486 : 184.0) no description available & (reliability: 1568.0) & (original description: Putative CYP51G1, Description = Sterol 14-demethylase, PFAM = PF00067)' T
'17.3.1.2.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.FACKEL' 'nbv0.5scaffold3838_10804-22853' '(at3g52940 : 491.0) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.; FACKEL (FK); FUNCTIONS IN: delta14-sterol reductase activity; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT1G50430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36648 : 348.0) no description available & (gnl|cdd|85316 : 257.0) no description available & (reliability: 982.0) & (original description: Putative FK, Description = Delta(14)-sterol reductase, PFAM = PF01222)' T
'17.3.1.2.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.FACKEL' 'niben101scf06769_405906-427086' '(at3g52940 : 492.0) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.; FACKEL (FK); FUNCTIONS IN: delta14-sterol reductase activity; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT1G50430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36648 : 350.0) no description available & (gnl|cdd|85316 : 261.0) no description available & (reliability: 984.0) & (original description: Putative FK, Description = Delta(14)-sterol reductase, PFAM = PF01222)' T
'17.3.1.2.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.HYD1' 'nbv0.3scaffold24472_3414-8053' '(q9ftz2|ebp_orysa : 232.0) Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase) - Oryza sativa (Rice) & (at1g20050 : 219.0) C-8 sterol isomerase; HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86837 : 211.0) no description available & (gnl|cdd|40023 : 209.0) no description available & (reliability: 438.0) & (original description: Putative Os01g0103600, Description = Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, PFAM = PF05241)' T
'17.3.1.2.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.HYD1' 'niben101scf05961_234210-238675' '(q9ftz2|ebp_orysa : 233.0) Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase) - Oryza sativa (Rice) & (at1g20050 : 219.0) C-8 sterol isomerase; HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86837 : 212.0) no description available & (gnl|cdd|40023 : 209.0) no description available & (reliability: 438.0) & (original description: Putative Os01g0103600, Description = Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, PFAM = PF05241)' T
'17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'nbv0.3scaffold48406_10455-15177' '(q9zt29|sc5d_tobac : 509.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 421.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 283.0) no description available & (reliability: 842.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T
'17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf02381_731734-737269' '(q9zt29|sc5d_tobac : 510.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 419.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 286.0) no description available & (reliability: 838.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T
'17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf04570_589240-597325' '(q9zt29|sc5d_tobac : 473.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 409.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 277.0) no description available & (reliability: 818.0) & (original description: Putative BnaA03g28020D, Description = BnaA03g28020D protein, PFAM = PF04116)' T
'17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf07072_111879-117918' '(q9zt29|sc5d_tobac : 474.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 414.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 280.0) no description available & (reliability: 828.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T
'17.3.1.2.7' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5' 'niben044scf00034356ctg004_9508-19891' '(at1g50430 : 599.0) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.; DWARF 5 (DWF5); FUNCTIONS IN: sterol delta7 reductase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT3G52940.1); Has 974 Blast hits to 971 proteins in 205 species: Archae - 0; Bacteria - 51; Metazoa - 266; Fungi - 402; Plants - 150; Viruses - 3; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36648 : 349.0) no description available & (gnl|cdd|85316 : 184.0) no description available & (reliability: 1198.0) & (original description: Putative DWF5, Description = 7-dehydrocholesterol reductase, PFAM = PF01222;PF01222)' T
'17.3.1.2.7' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5' 'niben101scf06967_348624-358587' '(at1g50430 : 691.0) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.; DWARF 5 (DWF5); FUNCTIONS IN: sterol delta7 reductase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT3G52940.1); Has 974 Blast hits to 971 proteins in 205 species: Archae - 0; Bacteria - 51; Metazoa - 266; Fungi - 402; Plants - 150; Viruses - 3; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36648 : 421.0) no description available & (gnl|cdd|85316 : 232.0) no description available & (reliability: 1382.0) & (original description: Putative DWF5, Description = 7-dehydrocholesterol reductase, PFAM = PF01222)' T
'17.3.1.2.8' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1' 'niben101scf00271_436855-440741' '(p93472|dim_pea : 903.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (at3g19820 : 895.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (gnl|cdd|36476 : 736.0) no description available & (gnl|cdd|30625 : 83.4) no description available & (reliability: 1790.0) & (original description: Putative DIM, Description = Delta(24)-sterol reductase, PFAM = PF01565)' T
'17.3.1.2.8' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1' 'niben101scf02156_382672-386714' '(p93472|dim_pea : 977.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (at3g19820 : 921.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (gnl|cdd|36476 : 746.0) no description available & (gnl|cdd|30625 : 80.7) no description available & (reliability: 1842.0) & (original description: Putative DIM, Description = Delta(24)-sterol reductase, PFAM = PF01565)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1994.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben044scf00020194ctg007_8217-13385' '(o48651|erg1_pangi : 798.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at1g58440 : 794.0) Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.; XF1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to water deprivation, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 1994 Blast hits to 1990 proteins in 731 species: Archae - 43; Bacteria - 1249; Metazoa - 112; Fungi - 225; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36512 : 774.0) no description available & (gnl|cdd|71919 : 437.0) no description available & (reliability: 1588.0) & (original description: Putative sqp2, Description = Squalene monooxygenase, PFAM = PF13450;PF08491)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2228.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf00314_208693-216561' '(at5g50375 : 418.0) Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2; cyclopropyl isomerase (CPI1); FUNCTIONS IN: cycloeucalenol cycloisomerase activity; INVOLVED IN: pinocytosis, sterol biosynthetic process, positive gravitropism, cytokinesis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cycloeucalenol cycloisomerase (InterPro:IPR020532). & (reliability: 836.0) & (original description: Putative CPI1, Description = Cycloeucalenol cycloisomerase, PFAM = )' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1224.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf05431_29967-38632' '(gnl|cdd|36512 : 775.0) no description available & (o48651|erg1_pangi : 729.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at4g37760 : 723.0) squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71919 : 423.0) no description available & (reliability: 1446.0) & (original description: Putative sqp1, Description = Squalene epoxidase, PFAM = PF08491;PF13450)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 316.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf16532_80911-109776' '(at2g07050 : 1298.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 1194.0) no description available & (gnl|cdd|29791 : 878.0) no description available & (reliability: 2596.0) & (original description: Putative bAS1, Description = Terpene cyclase/mutase family member, PFAM = PF13243;PF13249)' T
'17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf24355_36205-41170' '(o48651|erg1_pangi : 805.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at1g58440 : 797.0) Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.; XF1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to water deprivation, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 1994 Blast hits to 1990 proteins in 731 species: Archae - 43; Bacteria - 1249; Metazoa - 112; Fungi - 225; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36512 : 776.0) no description available & (gnl|cdd|71919 : 439.0) no description available & (reliability: 1594.0) & (original description: Putative sqp1, Description = Squalene epoxidase, PFAM = PF08491;PF13450)' T
'17.3.1.1001' 'hormone metabolism.brassinosteroid.synthesis-degradation' '22(s),23(s)-homobrassinolide' 'hormone metabolism.brassinosteroid' M
'17.3.1.1002' 'hormone metabolism.brassinosteroid.synthesis-degradation' '24-epibrassinolide' 'hormone metabolism.brassinosteroid' M
'17.3.1.1003' 'hormone metabolism.brassinosteroid.synthesis-degradation' '24-epicastasterone' 'hormone metabolism.brassinosteroid' M
'17.3.1.1004' 'hormone metabolism.brassinosteroid.synthesis-degradation' '28-homocastasteroneÍ ' 'hormone metabolism.brassinosteroid' M
'17.3.1.1005' 'hormone metabolism.brassinosteroid.synthesis-degradation' 'brassinolide' 'hormone metabolism.brassinosteroid' M
'17.3.1.1006' 'hormone metabolism.brassinosteroid.synthesis-degradation' 'castasterone' 'hormone metabolism.brassinosteroid' M
'17.3.2' 'hormone metabolism.brassinosteroid.signal transduction' '' ''
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'nbv0.3scaffold28118_17335-21958' '(at3g51740 : 963.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 303.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 155.0) no description available & (reliability: 1926.0) & (original description: Putative IMK2, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF07714;PF13855;PF13855;PF08263)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'nbv0.3scaffold94350_26-4779' '(at4g39400 : 1339.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 418.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2678.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF08263;PF13516;PF13516;PF13855;PF13855;PF13855;PF13855;PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00011255ctg003_1187-6700' '(at2g01950 : 1434.0) Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.; BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 454.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 326.0) no description available & (gnl|cdd|87344 : 165.0) no description available & (reliability: 2868.0) & (original description: Putative BRL2, Description = Serine/threonine-protein kinase BRI1-like 2, PFAM = PF08263;PF13855;PF13855;PF13855;PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00028720ctg007_3282-8205' '(at1g55610 : 1425.0) mutant has Altered vascular cell differentiation; LRR Receptor Kinase; BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 442.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2772.0) & (original description: Putative BRL1, Description = Serine/threonine-protein kinase BRI1-like 1, PFAM = PF00560;PF00069;PF13516;PF13516;PF13855;PF13855;PF08263)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00052552ctg000_24-5048' '(at4g39400 : 1338.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 422.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 167.0) no description available & (reliability: 2676.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF13516;PF13855;PF13855;PF13855;PF13855;PF13855;PF00069;PF08263;PF00560)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf00245_77654-83401' '(at1g74360 : 1223.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 217966 Blast hits to 139933 proteins in 5038 species: Archae - 191; Bacteria - 21618; Metazoa - 66649; Fungi - 11025; Plants - 92428; Viruses - 434; Other Eukaryotes - 25621 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (p93194|rpk1_iponi : 229.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 2446.0) & (original description: Putative At1g74360, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g74360, PFAM = PF00069;PF08263;PF13516;PF13855)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01237_742535-747513' '(at3g51740 : 750.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 260.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 150.0) no description available & (reliability: 1500.0) & (original description: Putative rhg1g, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF13855;PF13855;PF07714;PF08263)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01297_161248-165872' '(at3g51740 : 955.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 303.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1910.0) & (original description: Putative IMK2, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF00560;PF07714;PF13855;PF13855;PF08263)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01683_1159229-1164870' '(at4g39400 : 1342.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 419.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2684.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF13516;PF13516;PF13855;PF13855;PF13855;PF13855;PF00069;PF08263)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf04292_53198-57721' '(at3g51740 : 785.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 272.0) no description available & (q8lpb4|pskr_dauca : 176.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1570.0) & (original description: Putative IMK3, Description = Probable leucine-rich repeat receptor-like protein kinase IMK3, PFAM = PF13855;PF08263;PF07714;PF00560)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf05928_479005-484724' '(at1g74360 : 1271.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 217966 Blast hits to 139933 proteins in 5038 species: Archae - 191; Bacteria - 21618; Metazoa - 66649; Fungi - 11025; Plants - 92428; Viruses - 434; Other Eukaryotes - 25621 (source: NCBI BLink). & (p93194|rpk1_iponi : 368.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 324.0) no description available & (gnl|cdd|29142 : 174.0) no description available & (reliability: 2542.0) & (original description: Putative At1g74360, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g74360, PFAM = PF13516;PF13516;PF00069;PF08263;PF13855;PF13855)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf08832_13787-20209' '(at4g18710 : 729.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 634.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 574.0) no description available & (gnl|cdd|29142 : 228.0) no description available & (reliability: 1458.0) & (original description: Putative GSK3B, Description = Glycogen synthase kinase 3 beta variant 4, PFAM = PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf09082_38306-44213' '(at2g30980 : 717.0) Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.; SHAGGY-related protein kinase dZeta (SKdZeta); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, protein amino acid phosphorylation, regulation of protein localization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2); Has 110013 Blast hits to 108778 proteins in 3905 species: Archae - 83; Bacteria - 10808; Metazoa - 40209; Fungi - 11817; Plants - 28363; Viruses - 415; Other Eukaryotes - 18318 (source: NCBI BLink). & (q40518|msk1_tobac : 637.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 575.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1434.0) & (original description: Putative ASK9, Description = Shaggy-related protein kinase iota, PFAM = PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 244.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf12866_122962-129415' '(at4g18710 : 740.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 641.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 581.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1480.0) & (original description: Putative ASK7, Description = Shaggy-related protein kinase eta, PFAM = PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf13404_24319-31077' '(at4g39400 : 1330.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 427.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|87344 : 167.0) no description available & (reliability: 2660.0) & (original description: Putative BRI1, Description = Brassinosteroid insensitive 1, PFAM = PF13855;PF13855;PF13855;PF13855;PF13855;PF08263;PF00560;PF13516;PF00069)' T
'17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf13478_10419-15937' '(at2g01950 : 1424.0) Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.; BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 377.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 322.0) no description available & (gnl|cdd|87344 : 164.0) no description available & (reliability: 2848.0) & (original description: Putative BRL2, Description = Serine/threonine-protein kinase BRI1-like 2, PFAM = PF13516;PF13855;PF13855;PF00560;PF00069;PF08263)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'nbv0.5scaffold15_134780-139782' '(at1g78700 : 288.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 180.0) no description available & (reliability: 576.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'nbv0.5scaffold389_539354-543939' '(at1g75080 : 241.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 147.0) no description available & (reliability: 482.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben044scf00011108ctg010_1-5588' '(at1g78700 : 265.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 174.0) no description available & (reliability: 530.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben044scf00014938ctg002_9948-13213' '(at1g75080 : 251.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 187.0) no description available & (reliability: 502.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00073_538402-545329' '(at1g78700 : 266.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 177.0) no description available & (reliability: 532.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00219_602899-607050' '(at1g75080 : 248.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 183.0) no description available & (reliability: 496.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00894_477-4422' '(at1g19350 : 223.0) Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes; BRI1-EMS-SUPPRESSOR 1 (BES1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 2916 Blast hits to 477 proteins in 80 species: Archae - 0; Bacteria - 14; Metazoa - 122; Fungi - 71; Plants - 275; Viruses - 0; Other Eukaryotes - 2434 (source: NCBI BLink). & (gnl|cdd|69223 : 185.0) no description available & (reliability: 446.0) & (original description: Putative BEH2, Description = BES1/BZR1 homolog protein 2, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf03110_623107-626863' '(at1g75080 : 234.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 177.0) no description available & (reliability: 468.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf04132_171063-179239' '(at1g78700 : 312.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 174.0) no description available & (reliability: 624.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf10887_125261-128147' '(gnl|cdd|69223 : 117.0) no description available & (at1g19350 : 82.0) Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes; BRI1-EMS-SUPPRESSOR 1 (BES1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 2916 Blast hits to 477 proteins in 80 species: Archae - 0; Bacteria - 14; Metazoa - 122; Fungi - 71; Plants - 275; Viruses - 0; Other Eukaryotes - 2434 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative BAM7, Description = Brassinazole-resistant 1 protein, PFAM = PF05687)' T
'17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf12841_314844-319852' '(at1g78700 : 286.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 178.0) no description available & (reliability: 572.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'nbv0.3scaffold4422_59217-68778' '(at4g33430 : 910.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 354.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 1820.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263;PF00069)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'nbv0.5scaffold4223_194982-201970' '(gnl|cdd|36496 : 484.0) no description available & (gnl|cdd|84781 : 462.0) no description available & (p52711|cbp23_horvu : 436.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at3g63470 : 424.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (reliability: 806.0) & (original description: Putative CXP, Description = Serine carboxypeptidase II-3, PFAM = PF00450)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben044scf00003411ctg012_2079-5953' '(at4g33430 : 117.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (reliability: 234.0) & (original description: Putative lrr1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf00821_1610345-1613765' '(at1g71830 : 183.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later; somatic embryogenesis receptor-like kinase 1 (SERK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 2 (TAIR:AT1G34210.1); Has 181670 Blast hits to 121787 proteins in 4268 species: Archae - 123; Bacteria - 18224; Metazoa - 45784; Fungi - 8994; Plants - 88758; Viruses - 411; Other Eukaryotes - 19376 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative lrr1, Description = Putative somatic embryogenesis receptor kinase leucine-rich repeat protein 1, PFAM = PF08263;PF13855)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf01385_86571-92360' '(gnl|cdd|36496 : 482.0) no description available & (gnl|cdd|84781 : 458.0) no description available & (at3g63470 : 410.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 396.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 750.0) & (original description: Putative SCPL40, Description = Serine carboxypeptidase-like 40, PFAM = PF00450)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf01887_385189-403145' '(gnl|cdd|36496 : 466.0) no description available & (gnl|cdd|84781 : 444.0) no description available & (at3g63470 : 354.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 352.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 662.0) & (original description: Putative BRS1, Description = Carboxypeptidase, PFAM = PF00450)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02174_17590-20341' '(at2g35150 : 375.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 301.0) no description available & (reliability: 704.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02289_188228-201606' '(at1g69010 : 139.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative TCM_011433, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02513_1212351-1225639' '(at4g33430 : 922.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 355.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1844.0) & (original description: Putative SERK2, Description = Somatic embryogenesis receptor kinase 2, PFAM = PF08263;PF00069)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03473_147198-157217' '(at2g46290 : 550.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|35862 : 486.0) no description available & (gnl|cdd|29257 : 161.0) no description available & (reliability: 1062.0) & (original description: Putative eIF7, Description = Eukaryotic translation initiation factor 3 subunit I, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03551_205212-212702' '(at5g08130 : 240.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 480.0) & (original description: Putative BIM2, Description = Transcription factor BIM2, PFAM = PF00010)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03822_112597-115640' '(at2g17230 : 449.0) EXORDIUM like 5 (EXL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 1 (TAIR:AT2G35150.1); Has 402 Blast hits to 401 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 361.0) no description available & (reliability: 898.0) & (original description: Putative EXL5, Description = Protein EXORDIUM-like 5, PFAM = PF04674)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03867_37887-40903' '(at2g35150 : 370.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 304.0) no description available & (reliability: 718.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf05325_106467-118358' '(at4g30610 : 699.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|36496 : 547.0) no description available & (p08819|cbp2_wheat : 504.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (gnl|cdd|84781 : 485.0) no description available & (reliability: 1398.0) & (original description: Putative SCPL24, Description = Serine carboxypeptidase 24, PFAM = PF00450)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf06388_487658-497091' '(at5g08130 : 273.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 546.0) & (original description: Putative BIM1, Description = Transcription factor BIM1, PFAM = PF00010)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf10464_13911-22378' '(gnl|cdd|36496 : 467.0) no description available & (gnl|cdd|84781 : 450.0) no description available & (p52711|cbp23_horvu : 444.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at2g35780 : 429.0) serine carboxypeptidase-like 26 (scpl26); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 27 (TAIR:AT3G07990.1); Has 3733 Blast hits to 3660 proteins in 399 species: Archae - 0; Bacteria - 269; Metazoa - 644; Fungi - 857; Plants - 1549; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative Sb01g033770, Description = Carboxypeptidase, PFAM = PF00450)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf11779_215448-227040' '(at4g33430 : 934.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 353.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 1868.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF00069;PF08263)' T
'17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf11853_31925-41468' '(at5g08130 : 281.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 562.0) & (original description: Putative BIM1, Description = Transcription factor BIM1, PFAM = PF00010)' T
'17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00254_734028-736522' '(at3g61460 : 215.0) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative RHF, Description = Ubiquitin-protein ligase E3, PFAM = PF13639)' T
'17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00761_801446-835448' '(at3g20780 : 1054.0) Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.; topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|81315 : 347.0) no description available & (reliability: 2108.0) & (original description: Putative TOP6B, Description = DNA topoisomerase 6 subunit B, PFAM = PF02518;PF09239)' T
'17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00761_815363-818612' '(at3g20780 : 221.0) Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.; topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BIN3, Description = DNA topoisomerase 6 subunit B, PFAM = PF02518)' T
'17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf09701_299784-302275' '(at3g61460 : 80.5) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400012791, Description = RING-H2 zinc finger protein RHA2a, PFAM = PF13639)' T
'17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf11782_116573-119071' '(at3g61460 : 180.0) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BRH1, Description = BRH1 RING finger protein, PFAM = PF13639)' T
'17.4' 'hormone metabolism.cytokinin' '' ''
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold5828_58018-62123' '(at2g41510 : 692.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 548.0) no description available & (q9t0n8|ckx1_maize : 398.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 398.0) no description available & (reliability: 1384.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold10523_35406-39192' '(at1g22360 : 323.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 176.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 96.5) no description available & (reliability: 636.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold16830_1872-7938' '(at5g56970 : 598.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 546.0) no description available & (q9t0n8|ckx1_maize : 483.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 395.0) no description available & (reliability: 1196.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold58200_10942-12443' '(at5g56970 : 82.4) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative CKX, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold97251_1-4225' '(at5g56970 : 281.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 246.0) no description available & (q9t0n8|ckx1_maize : 231.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 124.0) no description available & (reliability: 562.0) & (original description: Putative cko1, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 852.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold131683_1-1590' '(gnl|cdd|72681 : 231.0) no description available & (at5g56970 : 227.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 200.0) no description available & (q9t0n8|ckx1_maize : 154.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 454.0) & (original description: Putative cko1, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold343_505652-510697' '(at1g22360 : 352.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 217.0) no description available & (q41819|iaag_maize : 185.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 666.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 302.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold1360_118420-124480' '(at1g22380 : 319.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 101.0) no description available & (reliability: 632.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold1793_312178-315398' '(at5g19040 : 191.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 168.0) no description available & (reliability: 382.0) & (original description: Putative SjIPT4, Description = Isopentenyltransferase, PFAM = PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold2049_94676-103247' '(at5g56970 : 607.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 547.0) no description available & (q9t0n8|ckx1_maize : 467.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 391.0) no description available & (reliability: 1214.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold4554_2321-9960' '(at5g21482 : 689.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 407.0) no description available & (q9t0n8|ckx1_maize : 367.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 354.0) no description available & (reliability: 1378.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00003896ctg041_366-2607' '(at1g22380 : 233.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 462.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00008217ctg045_1-3450' '(at5g19040 : 244.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 237.0) no description available & (gnl|cdd|80505 : 133.0) no description available & (reliability: 488.0) & (original description: Putative IPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00009974ctg007_5242-10338' '(at2g41510 : 729.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 555.0) no description available & (q9t0n8|ckx1_maize : 403.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 402.0) no description available & (reliability: 1458.0) & (original description: Putative CKX10, Description = Cytokinin dehydrogenase 10, PFAM = PF01565;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00012572ctg000_1-7245' '(at5g21482 : 696.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 408.0) no description available & (q9t0n8|ckx1_maize : 363.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 356.0) no description available & (reliability: 1392.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00014320ctg006_356-2591' '(at5g19040 : 156.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 145.0) no description available & (reliability: 312.0) & (original description: Putative RaIPT7, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00028825ctg003_1-2248' '(at5g56970 : 297.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|72681 : 248.0) no description available & (gnl|cdd|36445 : 241.0) no description available & (q9t0n8|ckx1_maize : 194.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 594.0) & (original description: Putative CKX, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00032642ctg008_1-4160' '(at2g41510 : 645.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 512.0) no description available & (gnl|cdd|72681 : 398.0) no description available & (q9t0n8|ckx1_maize : 378.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 1290.0) & (original description: Putative cko1, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00032671ctg003_1-2590' '(at1g22360 : 211.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q93xp7|czog1_maize : 146.0) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 416.0) & (original description: Putative BX8, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00361_189097-196804' '(at5g21482 : 691.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 406.0) no description available & (q9t0n8|ckx1_maize : 363.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 355.0) no description available & (reliability: 1382.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 300.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1170.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 338.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01518_621075-624211' '(gnl|cdd|36598 : 294.0) no description available & (at1g68460 : 291.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 147.0) no description available & (reliability: 582.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01612_309324-313541' '(at3g63440 : 737.0) This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 6 (CKX6); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 6490 Blast hits to 6485 proteins in 1279 species: Archae - 163; Bacteria - 4080; Metazoa - 140; Fungi - 1069; Plants - 530; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (gnl|cdd|36445 : 575.0) no description available & (q9t0n8|ckx1_maize : 407.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 401.0) no description available & (reliability: 1474.0) & (original description: Putative CKX6, Description = Cytokinin dehydrogenase 6, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01634_323894-328198' '(at2g41510 : 735.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 562.0) no description available & (q9t0n8|ckx1_maize : 407.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 404.0) no description available & (reliability: 1470.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01951_82991-87074' '(at3g11340 : 395.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q43641|ufog_solme : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 714.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01980_1023582-1027599' '(at1g22400 : 654.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 257.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 118.0) no description available & (reliability: 1308.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 878.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02537_879684-883233' '(at1g22360 : 658.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p14726|ufog_horvu : 188.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 128.0) no description available & (reliability: 1298.0) & (original description: Putative UGT85A23, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02537_899848-902369' '(at1g22370 : 244.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 102.0) no description available & (reliability: 484.0) & (original description: Putative F3GT, Description = Glycosyltransferase, PFAM = )' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02653_646676-650154' '(at1g22370 : 211.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 117.0) no description available & (p56725|zox_phavu : 86.7) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 422.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02751_261362-266172' '(at1g22360 : 649.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 247.0) no description available & (p14726|ufog_horvu : 181.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1294.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 958.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03050_614543-623290' '(at1g75450 : 790.0) This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1). & (gnl|cdd|36445 : 592.0) no description available & (q9t0n8|ckx1_maize : 448.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 434.0) no description available & (reliability: 1580.0) & (original description: Putative CKX5, Description = Cytokinin dehydrogenase 5, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 700.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03536_130108-134527' '(at1g22360 : 177.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 131.0) no description available & (p56725|zox_phavu : 122.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 348.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03536_130195-134016' '(at1g22360 : 96.3) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03651_367224-372220' '(at2g41510 : 727.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 560.0) no description available & (gnl|cdd|72681 : 403.0) no description available & (q9t0n8|ckx1_maize : 402.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 1454.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03714_293331-303353' '(at2g27760 : 474.0) Encodes tRNA isopentenyltransferase, similar to yeast MOD5.; tRNAisopentenyltransferase 2 (IPT2); CONTAINS InterPro DOMAIN/s: tRNA delta(2)-isopentenylpyrophosphate transferase (InterPro:IPR018022), tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 8447 Blast hits to 8274 proteins in 2665 species: Archae - 0; Bacteria - 5426; Metazoa - 146; Fungi - 137; Plants - 431; Viruses - 0; Other Eukaryotes - 2307 (source: NCBI BLink). & (gnl|cdd|36598 : 294.0) no description available & (gnl|cdd|80505 : 208.0) no description available & (reliability: 948.0) & (original description: Putative IPT2, Description = tRNA dimethylallyltransferase 2, PFAM = PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04283_246651-249616' '(at3g63110 : 333.0) Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.; isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36598 : 322.0) no description available & (gnl|cdd|30672 : 135.0) no description available & (reliability: 666.0) & (original description: Putative IPT3, Description = Adenylate isopentenyltransferase 3, chloroplastic, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 336.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04594_71511-74872' '(gnl|cdd|36598 : 299.0) no description available & (at1g68460 : 296.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 155.0) no description available & (reliability: 592.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1114.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf05290_60395-64518' '(at3g63110 : 319.0) Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.; isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36598 : 314.0) no description available & (gnl|cdd|80505 : 137.0) no description available & (reliability: 638.0) & (original description: Putative IPT3, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf05449_3046-9301' '(at5g56970 : 553.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 517.0) no description available & (q9t0n8|ckx1_maize : 449.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 356.0) no description available & (reliability: 1106.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF01565;PF09265;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1008.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf07252_11938-27259' '(at2g41510 : 708.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 549.0) no description available & (q9t0n8|ckx1_maize : 410.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 408.0) no description available & (reliability: 1416.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF09265;PF01565)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf07585_17143-23538' '(at1g22340 : 528.0) UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36406 : 227.0) no description available & (q41819|iaag_maize : 167.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1052.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08467_380719-385952' '(at1g22360 : 308.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 207.0) no description available & (p16165|ufo2_maize : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-Mc2 allele) - Zea mays (Maize) & (gnl|cdd|79510 : 106.0) no description available & (reliability: 612.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08549_187200-200266' '(at1g22400 : 276.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (p56725|zox_phavu : 154.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 552.0) & (original description: Putative PNGT2, Description = Uncharacterized glucosyltransferase 2, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08835_95983-102728' '(at1g22370 : 187.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 113.0) no description available & (q41819|iaag_maize : 84.3) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 360.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf10575_247329-253799' '(at5g19040 : 308.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 302.0) no description available & (gnl|cdd|80505 : 136.0) no description available & (reliability: 616.0) & (original description: Putative IPT5, Description = Adenylate isopentenyltransferase 5, chloroplastic, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf10877_28973-35628' '(at5g56970 : 578.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 526.0) no description available & (q9t0n8|ckx1_maize : 462.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 394.0) no description available & (reliability: 1156.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF01565;PF09265)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 324.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11182_171772-175596' '(gnl|cdd|36598 : 299.0) no description available & (at1g68460 : 276.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 116.0) no description available & (reliability: 552.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11299_120646-128098' '(at5g19040 : 135.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 113.0) no description available & (reliability: 270.0) & (original description: Putative IPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf21960_196639-199640' '(at5g19040 : 325.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 304.0) no description available & (gnl|cdd|80505 : 138.0) no description available & (reliability: 650.0) & (original description: Putative IPT5, Description = Adenylate isopentenyltransferase 5, chloroplastic, PFAM = PF01715;PF01715)' T
'17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf27793_53919-59921' '(at1g22380 : 352.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 672.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'17.4.1.1001' 'hormone metabolism.cytokinin.synthesis-degradation' '6-benzylaminopurine' 'hormone metabolism.cytokinin' M
'17.4.1.1002' 'hormone metabolism.cytokinin.synthesis-degradation' '6-benzylaminopurine-9-(beta-glucoside)' 'hormone metabolism.cytokinin' M
'17.4.1.1003' 'hormone metabolism.cytokinin.synthesis-degradation' 'zeatin' 'hormone metabolism.cytokinin' M
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.3scaffold17602_2883-10046' '(at2g47430 : 434.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 125.0) no description available & (gnl|cdd|83720 : 119.0) no description available & (reliability: 868.0) & (original description: Putative PGSC0003DMG400037133, Description = Histidine kinase 1 plant, putative, PFAM = PF00072;PF02518;PF00512)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.3scaffold95331_2422-4647' '(at5g35750 : 283.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 170.0) no description available & (gnl|cdd|83720 : 98.8) no description available & (reliability: 566.0) & (original description: Putative barA, Description = Histidine kinase 3, PFAM = PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold209_138606-147807' '(at5g35750 : 890.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 412.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (o49230|etr1_braol : 114.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 1780.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF02518;PF03924;PF00512;PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold2297_321029-324619' '(at2g01830 : 405.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 159.0) no description available & (gnl|cdd|83720 : 157.0) no description available & (o49230|etr1_braol : 95.1) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 810.0) & (original description: Putative HK2, Description = Histidine kinase 2, PFAM = PF00512)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold2736_29822-37324' '(at2g47430 : 446.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 132.0) no description available & (gnl|cdd|83720 : 126.0) no description available & (reliability: 892.0) & (original description: Putative RCOM_0353300, Description = Histidine kinase 1 plant, putative, PFAM = PF00512;PF00072;PF02518)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00006982ctg003_1-7729' '(at2g01830 : 1036.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 338.0) no description available & (gnl|cdd|67535 : 230.0) no description available & (o49230|etr1_braol : 120.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2072.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF02518;PF00512;PF00072;PF03924)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00011469ctg005_550-8949' '(at1g27320 : 1251.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 518.0) no description available & (gnl|cdd|83720 : 330.0) no description available & (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2502.0) & (original description: Putative hkf1, Description = Histidine kinase receptor, PFAM = PF00072;PF03924;PF02518;PF00512)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00027467ctg003_771-9254' '(at1g27320 : 1314.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 514.0) no description available & (gnl|cdd|83720 : 329.0) no description available & (o49230|etr1_braol : 141.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2628.0) & (original description: Putative hk3, Description = Histidine kinase 3 variant 2, PFAM = PF00072;PF00512;PF02518;PF03924)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00060927ctg001_165-5035' '(at2g25180 : 161.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC03g39750D, Description = BnaC03g39750D protein, PFAM = PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00087_944457-955596' '(at5g10720 : 972.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (gnl|cdd|35739 : 328.0) no description available & (gnl|cdd|83720 : 131.0) no description available & (q9m7m1|etr1_prupe : 113.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 1944.0) & (original description: Putative AHK5, Description = Histidine kinase 5, PFAM = PF02518;PF00512;PF00072;PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00290_76720-84954' '(at2g47430 : 448.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 132.0) no description available & (gnl|cdd|83720 : 127.0) no description available & (reliability: 896.0) & (original description: Putative RCOM_0353300, Description = Histidine kinase 1 plant, putative, PFAM = PF02518;PF00072;PF00512)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00691_149526-155693' '(at2g25180 : 362.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.9) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00249;PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf01511_61580-68331' '(at2g25180 : 353.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.1) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 706.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00072;PF00249)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf01664_60562-70169' '(at2g17820 : 1371.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (gnl|cdd|35739 : 242.0) no description available & (gnl|cdd|83720 : 196.0) no description available & (o81122|etr1_maldo : 103.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 2742.0) & (original description: Putative iK1, Description = Cold inducible histidine kinase 1, PFAM = PF00072;PF02518;PF00512)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf02805_147535-151593' '(at2g25180 : 106.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400035052, Description = , PFAM = PF00072;PF00249)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf03911_454358-462464' '(at1g27320 : 1315.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 521.0) no description available & (gnl|cdd|83720 : 332.0) no description available & (o49230|etr1_braol : 146.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2630.0) & (original description: Putative hk3, Description = Histidine kinase 3 variant 2, PFAM = PF03924;PF00072;PF00512;PF02518)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf04554_372092-383229' '(at5g10720 : 956.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (gnl|cdd|35739 : 330.0) no description available & (gnl|cdd|83720 : 132.0) no description available & (o49230|etr1_braol : 123.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 1912.0) & (original description: Putative AHK5, Description = Histidine kinase 5, PFAM = PF00072;PF00512;PF02518)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf06348_62645-67075' '(at3g16857 : 122.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = PF00249)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf08855_288221-297422' '(at2g01830 : 1282.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 493.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (q9ssy6|etr1_cucsa : 151.0) Ethylene receptor (EC 2.7.13.3) (CS-ETR1) - Cucumis sativus (Cucumber) & (reliability: 2564.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF00512;PF02518;PF03924;PF00072)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf09260_376887-386890' '(at2g01830 : 1299.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 493.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2598.0) & (original description: Putative HK4, Description = Probable histidine kinase 4, PFAM = PF02518;PF00072;PF00512;PF03924)' T
'17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf18703_25185-41317' '(at5g35750 : 1330.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 505.0) no description available & (gnl|cdd|83720 : 347.0) no description available & (q9m7m1|etr1_prupe : 142.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 2660.0) & (original description: Putative hk2, Description = Histidine kinase 2, PFAM = PF03924;PF02518;PF00512;PF00072)' T
'17.4.3' 'hormone metabolism.cytokinin.induced-regulated-responsive-activated' '' ''
'17.5' 'hormone metabolism.ethylene' '' ''
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold17972_21210-36005' '(at4g36910 : 212.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 83.6) no description available & (reliability: 408.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 256.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold36220_1074-4533' '(at1g48420 : 195.0) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.; D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink). & (gnl|cdd|81229 : 151.0) no description available & (reliability: 390.0) & (original description: Putative cuyA, Description = D-cysteine desulfhydrase, PFAM = PF00291)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold414_274001-348509' '(at4g36910 : 247.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 98.1) no description available & (reliability: 476.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold1546_17778-27828' '(at5g59540 : 117.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59530.1); Has 7263 Blast hits to 7229 proteins in 962 species: Archae - 0; Bacteria - 1031; Metazoa - 70; Fungi - 654; Plants - 4685; Viruses - 0; Other Eukaryotes - 823 (source: NCBI BLink). & (o04847|dv4h_catro : 93.6) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 83.5) no description available & (reliability: 234.0) & (original description: Putative BnaA09g50540D, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold3164_84944-98626' '(gnl|cdd|35365 : 268.0) no description available & (at1g06650 : 247.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G06640.1); Has 8180 Blast hits to 8149 proteins in 985 species: Archae - 0; Bacteria - 1067; Metazoa - 118; Fungi - 802; Plants - 4889; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (o04847|dv4h_catro : 231.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 492.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold3352_205636-222897' '(at4g36910 : 238.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 92.6) no description available & (reliability: 442.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold5521_40017-44610' '(at1g06620 : 426.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 417.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 151.0) no description available & (reliability: 824.0) & (original description: Putative D4H, Description = Deacetoxyvindoline 4-hydroxylase, PFAM = PF14226;PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00002391ctg020_4737-9976' '(at4g36910 : 142.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00010453ctg000_9797-18032' '(at3g51770 : 1282.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2564.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00019527ctg003_1072-3520' '(at5g58660 : 91.3) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G47190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400030362, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00020533ctg002_17814-20503' '(at1g06620 : 177.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 144.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 130.0) no description available & (gnl|cdd|33294 : 90.7) no description available & (reliability: 344.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00280_163898-178605' '(at4g36910 : 286.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 103.0) no description available & (reliability: 518.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00415_85546-89896' '(at1g06620 : 400.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 340.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 778.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00573_288263-295653' '(at5g58660 : 285.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G47190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 229.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (q9sq80|g2ox1_pea : 126.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (reliability: 526.0) & (original description: Putative GA2ox5, Description = Gibberellin biosynthesis-related protein GA2ox5, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00951_56731-62315' '(at1g06620 : 423.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (reliability: 794.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf01033_325722-342682' '(gnl|cdd|35365 : 269.0) no description available & (at1g06620 : 247.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 232.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 492.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02045_409197-413735' '(at3g12900 : 455.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8653 Blast hits to 8615 proteins in 1001 species: Archae - 0; Bacteria - 1126; Metazoa - 119; Fungi - 1049; Plants - 4930; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|35365 : 256.0) no description available & (gnl|cdd|33294 : 175.0) no description available & (o04847|dv4h_catro : 156.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 910.0) & (original description: Putative BnaC03g73320D, Description = BnaC03g73320D protein, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_238737-242446' '(at1g06620 : 431.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 375.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (reliability: 826.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 264.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 702.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02362_335722-343753' '(at3g51770 : 1179.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2358.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf03009_520724-532775' '(at4g36910 : 276.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 102.0) no description available & (reliability: 516.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04117_98399-102659' '(at1g06620 : 314.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 312.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 275.0) no description available & (gnl|cdd|33294 : 158.0) no description available & (reliability: 606.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 268.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04908_7814-18534' '(at1g06620 : 330.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 318.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 253.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 632.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF03171;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04908_15158-18296' '(at1g06620 : 187.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 162.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 97.4) no description available & (reliability: 340.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04918_654737-658482' '(at5g20400 : 347.0) encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G49390.1); Has 8498 Blast hits to 8450 proteins in 980 species: Archae - 0; Bacteria - 1051; Metazoa - 121; Fungi - 1005; Plants - 4926; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|35365 : 281.0) no description available & (q07512|fls_pethy : 178.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 157.0) no description available & (reliability: 694.0) & (original description: Putative EFE, Description = EFE, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf05135_667791-711776' '(at4g36910 : 261.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 99.6) no description available & (reliability: 492.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf05135_693850-714143' '(at4g36910 : 222.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 83.4) no description available & (reliability: 414.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06318_84012-92450' '(at3g51770 : 1277.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2554.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06344_101468-112720' '(at4g36910 : 254.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 96.4) no description available & (reliability: 504.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 262.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07833_184590-188542' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 394.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 306.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 836.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 784.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf08137_352829-363909' '(at1g48420 : 581.0) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.; D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink). & (gnl|cdd|81229 : 308.0) no description available & (reliability: 1162.0) & (original description: Putative yedO, Description = D-cysteine desulfhydrase, PFAM = PF00291)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 272.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf12919_49053-57883' '(at4g34120 : 253.0) LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G36910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73086 : 97.5) no description available & (reliability: 506.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold44344_3420-17227' '(at5g51690 : 633.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; 1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 10 (TAIR:AT1G62960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35477 : 547.0) no description available & (p37821|1a1c_maldo : 416.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 249.0) no description available & (reliability: 1266.0) & (original description: Putative ACS12, Description = Probable aminotransferase ACS12, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold73407_572-4357' '(q00257|1a12_cucma : 729.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 721.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 671.0) no description available & (gnl|cdd|84568 : 304.0) no description available & (reliability: 1442.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold74419_1274-7291' '(at1g62960 : 631.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; ACC synthase 10 (ACS10); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 12 (TAIR:AT5G51690.1); Has 24899 Blast hits to 24897 proteins in 2866 species: Archae - 734; Bacteria - 16849; Metazoa - 510; Fungi - 690; Plants - 1280; Viruses - 0; Other Eukaryotes - 4836 (source: NCBI BLink). & (gnl|cdd|35477 : 530.0) no description available & (p37821|1a1c_maldo : 406.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 260.0) no description available & (reliability: 1262.0) & (original description: Putative ACS10, Description = Probable aminotransferase ACS10, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00014495ctg012_1-2787' '(at4g26200 : 652.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 635.0) no description available & (q00257|1a12_cucma : 535.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 291.0) no description available & (reliability: 1304.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00032107ctg000_12967-17783' '(p37821|1a1c_maldo : 643.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (at4g37770 : 642.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 630.0) no description available & (gnl|cdd|84568 : 298.0) no description available & (reliability: 1284.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00057969ctg000_1-3359' '(q00257|1a12_cucma : 753.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 734.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 673.0) no description available & (gnl|cdd|84568 : 315.0) no description available & (reliability: 1468.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf00108_536697-541277' '(at4g26200 : 669.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 649.0) no description available & (q00257|1a12_cucma : 538.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 295.0) no description available & (reliability: 1338.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf00254_37098-42158' '(p31531|1a1c_soybn : 697.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 651.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 645.0) no description available & (gnl|cdd|84568 : 310.0) no description available & (reliability: 1302.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02053_54442-58184' '(p37821|1a1c_maldo : 712.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (at4g37770 : 706.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 652.0) no description available & (gnl|cdd|84568 : 297.0) no description available & (reliability: 1412.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02334_14593-19274' '(p31531|1a1c_soybn : 714.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 677.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 650.0) no description available & (gnl|cdd|84568 : 323.0) no description available & (reliability: 1354.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02740_1575303-1580283' '(q00257|1a12_cucma : 726.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 704.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 675.0) no description available & (gnl|cdd|84568 : 318.0) no description available & (reliability: 1408.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02816_549454-553060' '(at4g26200 : 664.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 638.0) no description available & (q00257|1a12_cucma : 533.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 289.0) no description available & (reliability: 1328.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf03226_170954-177429' '(p31531|1a1c_soybn : 703.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 661.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 645.0) no description available & (gnl|cdd|84568 : 324.0) no description available & (reliability: 1322.0) & (original description: Putative ACS2, Description = 1-aminocyclopropane-1-carboxylate synthase 2, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf03907_131814-145189' '(at5g51690 : 625.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; 1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 10 (TAIR:AT1G62960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35477 : 547.0) no description available & (p37821|1a1c_maldo : 416.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 248.0) no description available & (reliability: 1250.0) & (original description: Putative ACS12, Description = Probable aminotransferase ACS12, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf04773_10086-14463' '(p31531|1a1c_soybn : 684.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (gnl|cdd|35477 : 635.0) no description available & (at3g61510 : 622.0) Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.; ACC synthase 1 (ACS1); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 2 (TAIR:AT1G01480.1); Has 22999 Blast hits to 22998 proteins in 2818 species: Archae - 808; Bacteria - 15898; Metazoa - 560; Fungi - 631; Plants - 1241; Viruses - 0; Other Eukaryotes - 3861 (source: NCBI BLink). & (gnl|cdd|84568 : 314.0) no description available & (reliability: 1244.0) & (original description: Putative Acs2, Description = ACC synthase ACS2, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf05348_158839-169606' '(at1g62960 : 636.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; ACC synthase 10 (ACS10); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 12 (TAIR:AT5G51690.1); Has 24899 Blast hits to 24897 proteins in 2866 species: Archae - 734; Bacteria - 16849; Metazoa - 510; Fungi - 690; Plants - 1280; Viruses - 0; Other Eukaryotes - 4836 (source: NCBI BLink). & (gnl|cdd|35477 : 534.0) no description available & (p37821|1a1c_maldo : 409.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 259.0) no description available & (reliability: 1272.0) & (original description: Putative ACS10, Description = Probable aminotransferase ACS10, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf06180_83443-87965' '(p31531|1a1c_soybn : 717.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 674.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 652.0) no description available & (gnl|cdd|84568 : 324.0) no description available & (reliability: 1348.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf09512_368746-373152' '(q07262|1a1c_tobac : 946.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Nicotiana tabacum (Common tobacco) & (at1g01480 : 676.0) a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.; 1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink). & (gnl|cdd|35477 : 665.0) no description available & (gnl|cdd|84568 : 346.0) no description available & (reliability: 1352.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T
'17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf15817_137232-141122' '(q00257|1a12_cucma : 743.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 737.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 675.0) no description available & (gnl|cdd|84568 : 305.0) no description available & (reliability: 1474.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold19383_19913-24487' '(at1g77330 : 449.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 321.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 172.0) no description available & (reliability: 898.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold97987_1-4005' '(q08507|acco3_pethy : 542.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 446.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 264.0) no description available & (gnl|cdd|33294 : 146.0) no description available & (reliability: 892.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.5scaffold174_316947-321521' '(at1g77330 : 429.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 307.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (reliability: 858.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00004103ctg003_1-1557' '(at1g77330 : 309.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (p31237|acco_actch : 254.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 203.0) no description available & (gnl|cdd|33294 : 124.0) no description available & (reliability: 618.0) & (original description: Putative acco1, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00006907ctg030_1-3500' '(at1g77330 : 424.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (o48882|acco2_maldo : 309.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 164.0) no description available & (reliability: 848.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00012234ctg002_18563-22253' '(at1g77330 : 449.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 320.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 295.0) no description available & (gnl|cdd|33294 : 173.0) no description available & (reliability: 898.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00016127ctg003_1-4186' '(q08507|acco3_pethy : 573.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 464.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 928.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf00430_12401-16263' '(at1g77330 : 430.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (o48882|acco2_maldo : 307.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 284.0) no description available & (gnl|cdd|33294 : 161.0) no description available & (reliability: 860.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 266.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02433_657502-662090' '(q08507|acco3_pethy : 469.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 419.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 266.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 838.0) & (original description: Putative aco1, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02543_124693-129416' '(q08507|acco3_pethy : 574.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 463.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 279.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 926.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02860_433510-437736' '(q08507|acco3_pethy : 129.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g62380 : 124.0) Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.; ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|35365 : 109.0) no description available & (reliability: 248.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02918_1610-5436' '(q08507|acco3_pethy : 561.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 461.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 282.0) no description available & (gnl|cdd|33294 : 161.0) no description available & (reliability: 922.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 252.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 244.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 260.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf09217_81367-84803' '(p31237|acco_actch : 500.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (at1g05010 : 458.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 916.0) & (original description: Putative aco, Description = Aco protein, PFAM = PF03171;PF14226)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf09590_356767-360195' '(q08507|acco3_pethy : 505.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 459.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 279.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 918.0) & (original description: Putative ACO, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf13622_173696-177083' '(p31237|acco_actch : 493.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (at1g05010 : 457.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 277.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 914.0) & (original description: Putative ACO2, Description = ACC oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf14041_85437-89127' '(at1g77330 : 428.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 306.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 290.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (reliability: 856.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf14041_86860-127274' '(at1g77330 : 306.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (p31237|acco_actch : 247.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 201.0) no description available & (gnl|cdd|33294 : 124.0) no description available & (reliability: 612.0) & (original description: Putative acco1, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171)' T
'17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf15670_37034-40204' '(at2g19590 : 426.0) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase; ACC oxidase 1 (ACO1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 7815 Blast hits to 7777 proteins in 927 species: Archae - 0; Bacteria - 960; Metazoa - 67; Fungi - 764; Plants - 4878; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (p31237|acco_actch : 323.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 243.0) no description available & (gnl|cdd|33294 : 130.0) no description available & (reliability: 852.0) & (original description: Putative aco5, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF03171;PF14226)' T
'17.5.1.20' 'hormone metabolism.ethylene.synthesis-degradation.XBAT32' 'niben101scf03189_135244-142311' '(at5g57740 : 590.0) ubiquitin ligase; XB3 ortholog 2 in Arabidopsis thaliana (XBAT32); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35730 : 102.0) no description available & (gnl|cdd|29261 : 98.6) no description available & (reliability: 1180.0) & (original description: Putative BnaA02g35390D, Description = BnaA02g35390D protein, PFAM = PF12796;PF12796;PF12796)' T
'17.5.1.20' 'hormone metabolism.ethylene.synthesis-degradation.XBAT32' 'niben101scf06275_556274-564529' '(at5g57740 : 592.0) ubiquitin ligase; XB3 ortholog 2 in Arabidopsis thaliana (XBAT32); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35730 : 105.0) no description available & (gnl|cdd|29261 : 103.0) no description available & (reliability: 1184.0) & (original description: Putative XBOS32, Description = Probable E3 ubiquitin-protein ligase XBOS32, PFAM = PF12796;PF12796;PF12796)' T
'17.5.1.1001' 'hormone metabolism.ethylene.synthesis-degradation' '1-aminocyclopropanecarboxylate' 'ethylene biosynthesis precursor' M
'17.5.1.1002' 'hormone metabolism.ethylene.synthesis-degradation' '(s)-trans-2-amino-4-(2-aminoethoxy)-3-butenoate' 'ethylene biosynthesis inhibitor' M
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold6870_35836-38638' '(at2g31230 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (q40479|erf2_tobac : 80.9) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 80.7) no description available & (reliability: 220.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold8106_33270-36680' '(gnl|cdd|47695 : 96.1) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold8231_25097-29207' '(at2g23060 : 552.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold11028_4516-7391' '(q40478|erf5_tobac : 426.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 352.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold14682_1-2701' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold16114_29221-33646' '(gnl|cdd|47695 : 107.0) no description available & (at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 212.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold23018_23826-26563' '(at4g34410 : 115.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 81.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold23777_2663-5412' '(gnl|cdd|47695 : 116.0) no description available & (at4g34410 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold24293_25584-29320' '(at5g13910 : 118.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 234.0) & (original description: Putative erf, Description = Ethylene responsive transcription factor (ERF) like protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold25098_5545-8288' '(at4g34410 : 115.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 84.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold29041_14831-17445' '(at5g07580 : 152.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 112.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (reliability: 304.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold40000_3276-5794' '(gnl|cdd|47695 : 98.0) no description available & (q9lw49|erf4_nicsy : 89.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at1g50640 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative erf, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold46095_13290-16159' '(q9lw49|erf4_nicsy : 144.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 118.0) no description available & (at5g44210 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold47349_836-4152' '(gnl|cdd|66792 : 240.0) no description available & (at4g31980 : 179.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative , Description = , PFAM = PF03140)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold60240_8582-11316' '(q9lw48|erf5_nicsy : 350.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (at5g51190 : 169.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 338.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold76206_3295-6245' '(at2g31230 : 129.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 97.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 97.2) no description available & (reliability: 258.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold78351_629-3483' '(gnl|cdd|47695 : 113.0) no description available & (at4g34410 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ERF2, Description = EREBP-like factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold90269_3048-5398' '(at1g28360 : 119.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 99.2) no description available & (reliability: 238.0) & (original description: Putative ERF12, Description = Ethylene-responsive transcription factor 12, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold100345_370-3846' '(gnl|cdd|47695 : 94.5) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold101653_1248-3837' '(q40478|erf5_tobac : 224.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 141.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 282.0) & (original description: Putative ERF3, Description = Ethylene response factor ERF3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold336_317655-340055' '(gnl|cdd|47695 : 113.0) no description available & (q9lw49|erf4_nicsy : 99.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.9) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold879_563773-566444' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 100.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 200.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1166_25018-27545' '(at3g50260 : 134.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 97.6) no description available & (reliability: 268.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1447_429530-432198' '(q9sxs8|erf3_tobac : 207.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (at1g50640 : 94.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative ATF2, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1630_257324-260800' '(at5g13910 : 99.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1916_193891-197627' '(at5g13910 : 119.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.2) no description available & (q9lw49|erf4_nicsy : 81.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 234.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1916_215466-218876' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 92.8) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold2554_36640-39581' '(at5g47230 : 144.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 132.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (reliability: 288.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold2842_63197-66067' '(at4g17500 : 149.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 125.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 106.0) no description available & (reliability: 298.0) & (original description: Putative ERF1A, Description = Ethylene-responsive transcription factor 1A, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold3078_233138-235851' '(gnl|cdd|47695 : 113.0) no description available & (at3g15210 : 105.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 100.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold3587_105717-108119' '(at3g23240 : 90.5) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 81.8) no description available & (reliability: 181.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold5114_84352-87026' '(q9sxs8|erf3_tobac : 217.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 104.0) no description available & (at1g50640 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold6623_64922-75375' '(at4g34410 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 81.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold6678_40927-73570' '(at2g31230 : 101.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 95.7) no description available & (reliability: 202.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold9159_14776-19006' '(at5g25190 : 178.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 116.0) no description available & (reliability: 356.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00000912ctg003_1884-4624' '(at5g47220 : 141.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.4) no description available & (reliability: 282.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00001299ctg006_10901-14484' '(at3g04580 : 686.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 453.0) no description available & (o48929|etr1_tobac : 440.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|83708 : 132.0) no description available & (reliability: 1372.0) & (original description: Putative ETR6, Description = Ethylene receptor, PFAM = PF00512;PF01590;PF00072)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00002094ctg002_360-3052' '(at3g23240 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 94.5) no description available & (reliability: 206.0) & (original description: Putative ERF1, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00002346ctg006_28364-30933' '(at2g31230 : 97.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 92.6) no description available & (reliability: 194.8) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00004141ctg001_4645-7490' '(at3g50260 : 135.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00005599ctg021_9898-14490' '(at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 212.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00007081ctg013_1170-8977' '(o48929|etr1_tobac : 1255.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 1135.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 563.0) no description available & (gnl|cdd|83720 : 238.0) no description available & (reliability: 2270.0) & (original description: Putative ETR1, Description = Ethylene receptor 1, PFAM = PF00512;PF00072;PF01590;PF02518)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00008882ctg004_1-2023' '(at5g47230 : 137.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 128.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (reliability: 274.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00011199ctg001_2308-4742' '(at3g23230 : 130.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (q9lw50|erf2_nicsy : 94.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 260.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00013621ctg006_1378-4055' '(q40478|erf5_tobac : 223.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 138.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 276.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00020875ctg009_26232-29528' '(gnl|cdd|47695 : 93.8) no description available & (at5g13910 : 89.7) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00024087ctg018_1-2107' '(o48929|etr1_tobac : 483.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 447.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 210.0) no description available & (reliability: 894.0) & (original description: Putative ETR2, Description = Ethylene receptor 2, PFAM = PF01590)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00028162ctg000_9112-11302' '(gnl|cdd|47695 : 109.0) no description available & (at4g34410 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00028426ctg015_2376-5209' '(at5g25190 : 182.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 116.0) no description available & (reliability: 364.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00029104ctg014_1675-4695' '(gnl|cdd|47695 : 114.0) no description available & (at4g34410 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00032379ctg009_1245-3901' '(q9sxs8|erf3_tobac : 164.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (at1g50640 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00035066ctg002_14245-16631' '(at3g23230 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (q40479|erf2_tobac : 95.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 94.5) no description available & (reliability: 226.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00038737ctg003_842-3339' '(gnl|cdd|47695 : 97.6) no description available & (at4g23750 : 86.7) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00042550ctg001_6281-8946' '(at5g47220 : 135.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 121.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.0) no description available & (reliability: 270.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00053142ctg001_7544-10330' '(at3g23240 : 174.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 104.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 101.0) no description available & (reliability: 348.0) & (original description: Putative ERF1B, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00053720ctg005_2747-5444' '(at5g25190 : 156.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 312.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00321_285919-288662' '(gnl|cdd|47695 : 114.0) no description available & (at4g34410 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 83.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 222.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00321_292785-325488' '(gnl|cdd|47695 : 111.0) no description available & (at4g34410 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q40477|erf4_tobac : 80.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 220.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00428_1017885-1020625' '(at5g47220 : 142.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 97.6) no description available & (reliability: 284.0) & (original description: Putative McEREBP1, Description = Ethylene-responsive element binding protein1 homolog, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_253979-256584' '(at5g07580 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw48|erf5_nicsy : 101.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 250.0) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_265856-268461' '(at5g07580 : 142.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw48|erf5_nicsy : 109.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 107.0) no description available & (reliability: 284.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_316925-319728' '(q40478|erf5_tobac : 185.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 139.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 278.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_422468-425175' '(q40476|erf1_tobac : 328.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (at4g17500 : 150.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 95.7) no description available & (reliability: 300.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00750_445212-449645' '(at3g04580 : 683.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 447.0) no description available & (o81122|etr1_maldo : 434.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 131.0) no description available & (reliability: 1366.0) & (original description: Putative ETR2, Description = Ethylene receptor, PFAM = PF00512;PF00072;PF01590)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00839_7641-12066' '(gnl|cdd|47695 : 106.0) no description available & (at1g28370 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 101.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00991_1014537-1018156' '(at2g23060 : 581.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1144.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01008_30825-114891' '(at1g28360 : 130.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q40477|erf4_tobac : 104.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 101.0) no description available & (reliability: 260.0) & (original description: Putative ERF5, Description = ERF5 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01082_445705-448367' '(at2g44840 : 118.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 107.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 104.0) no description available & (reliability: 236.0) & (original description: Putative ERF163, Description = Ethylene response factor 163, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01090_201399-204058' '(at3g23240 : 150.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (q9lw48|erf5_nicsy : 87.8) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 300.0) & (original description: Putative erf1, Description = Ethylene response factor 1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01094_334433-336984' '(at3g23240 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q40479|erf2_tobac : 93.2) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 212.0) & (original description: Putative PTI5, Description = Pathogenesis-related genes transcriptional activator PTI5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01094_338225-341046' '(gnl|cdd|47695 : 100.0) no description available & (at5g51190 : 90.1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 83.2) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (reliability: 180.2) & (original description: Putative ERF16, Description = Transcription factor ERF16, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01142_473759-476387' '(at5g25190 : 163.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 326.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01159_12240-14911' '(at2g44840 : 139.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 124.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 278.0) & (original description: Putative DORA, Description = AP2-domain DNA-binding protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01212_428371-431195' '(gnl|cdd|47695 : 100.0) no description available & (at4g18450 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 1 (TAIR:AT3G23240.1); Has 5532 Blast hits to 5448 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5521; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (q40476|erf1_tobac : 83.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (reliability: 188.8) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01350_703833-706657' '(gnl|cdd|47695 : 117.0) no description available & (at4g34410 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01426_80841-83521' '(q9lw49|erf4_nicsy : 343.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 112.0) no description available & (at5g44210 : 98.6) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01428_462472-464915' '(at3g23230 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (q9lw50|erf2_nicsy : 95.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 224.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01428_462541-464927' '(at3g23230 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (q40479|erf2_tobac : 95.5) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 95.3) no description available & (reliability: 222.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01430_217987-224101' '(o81122|etr1_maldo : 833.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (at2g40940 : 813.0) Ethylene receptor, subfamily 1. Has histidine kinase activity.; ethylene response sensor 1 (ERS1); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT1G66340.1); Has 78353 Blast hits to 77870 proteins in 2969 species: Archae - 539; Bacteria - 69363; Metazoa - 12; Fungi - 1128; Plants - 1692; Viruses - 20; Other Eukaryotes - 5599 (source: NCBI BLink). & (gnl|cdd|35739 : 399.0) no description available & (gnl|cdd|83720 : 210.0) no description available & (reliability: 1626.0) & (original description: Putative ers, Description = Ethylene response sensor, PFAM = PF01590;PF00512;PF02518)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01795_213729-220809' '(at3g04580 : 830.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 497.0) no description available & (o81122|etr1_maldo : 441.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 133.0) no description available & (reliability: 1660.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF02518;PF01590;PF00072)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01795_640728-643300' '(at3g23240 : 128.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q9lw48|erf5_nicsy : 81.6) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 256.0) & (original description: Putative ERF3, Description = AP2-ERF transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01818_782696-786107' '(at1g28160 : 109.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 218.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01818_801154-804630' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01947_199873-202547' '(at3g23240 : 104.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 208.0) & (original description: Putative ERF1, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01956_1182170-1204413' '(at3g23240 : 165.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (q9lw50|erf2_nicsy : 87.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 330.0) & (original description: Putative erf1, Description = Ethylene response factor 1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02282_114748-118858' '(at4g37580 : 555.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02408_67920-70774' '(gnl|cdd|47695 : 113.0) no description available & (at4g34410 : 104.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_82475-85209' '(at4g17500 : 147.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 123.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 294.0) & (original description: Putative BnaC07g20040D, Description = BnaC07g20040D protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_106041-108833' '(at4g17500 : 150.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 300.0) & (original description: Putative McEREBP1, Description = Ethylene-responsive element binding protein1 homolog, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_160294-162959' '(at5g47220 : 134.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 120.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.4) no description available & (reliability: 268.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02913_92841-103220' '(gnl|cdd|66792 : 303.0) no description available & (at3g50150 : 176.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1158 Blast hits to 1035 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative PGSC0003DMG400006524, Description = Putative UPF0481 protein, PFAM = PF03140)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03035_149882-152562' '(q9lw49|erf4_nicsy : 356.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 109.0) no description available & (at5g44210 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03223_25314-27730' '(at1g46768 : 124.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.; related to AP2 1 (RAP2.1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5681 Blast hits to 5559 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5675; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 244.0) & (original description: Putative CEJ1, Description = Dehydration responsive element binding protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03314_67689-70153' '(at5g67190 : 153.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 304.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03940_457091-461524' '(at3g23150 : 696.0) Involved in ethylene perception in Arabidopsis; ethylene response 2 (ETR2); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G04580.2); Has 29902 Blast hits to 25922 proteins in 2098 species: Archae - 92; Bacteria - 25510; Metazoa - 11; Fungi - 1191; Plants - 1553; Viruses - 6; Other Eukaryotes - 1539 (source: NCBI BLink). & (gnl|cdd|35739 : 461.0) no description available & (o81122|etr1_maldo : 421.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 128.0) no description available & (reliability: 1392.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF00072;PF01590;PF00512)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf04316_905646-917270' '(o48929|etr1_tobac : 1360.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 1160.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 565.0) no description available & (gnl|cdd|83720 : 233.0) no description available & (reliability: 2320.0) & (original description: Putative ETR1, Description = Ethylene receptor, PFAM = PF00512;PF00072;PF02518;PF01590)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf04826_193905-196435' '(at3g50260 : 139.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 278.0) & (original description: Putative DREB5A, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05135_628878-631393' '(at2g23340 : 139.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 3 (DEAR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_579666-582283' '(at2g44840 : 132.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 129.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 264.0) & (original description: Putative DORA, Description = AP2-domain DNA-binding protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_588084-590641' '(at2g44840 : 124.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40476|erf1_tobac : 114.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 248.0) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_853823-856491' '(gnl|cdd|47695 : 93.4) no description available & (at2g44840 : 90.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 87.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 181.8) & (original description: Putative ERF115, Description = Ethylene response factor 115, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05480_14236-16727' '(at1g28360 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 224.0) & (original description: Putative ERF12, Description = Ethylene-responsive transcription factor 12, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06200_124514-127182' '(q40477|erf4_tobac : 108.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (at5g44210 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06203_628423-633786' '(gnl|cdd|47695 : 111.0) no description available & (at4g34410 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06413_130707-133213' '(at2g31230 : 127.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q40479|erf2_tobac : 100.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 254.0) & (original description: Putative ERF3, Description = AP2-ERF transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06444_212633-215100' '(at5g67190 : 150.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 292.0) & (original description: Putative CEJ1, Description = RAP2-like protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07172_13933-16784' '(gnl|cdd|47695 : 116.0) no description available & (at4g34410 : 114.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 228.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07310_218787-221455' '(q9sxs8|erf3_tobac : 218.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (at1g50640 : 85.5) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_25253-27633' '(gnl|cdd|47695 : 93.4) no description available & (at3g23220 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G23230.1); Has 5797 Blast hits to 5590 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5785; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 80.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 171.8) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_69113-71583' '(gnl|cdd|47695 : 100.0) no description available & (at3g23230 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF096, Description = Ethylene-responsive transcription factor ERF096, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_271254-273982' '(at3g23240 : 171.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q9lw50|erf2_nicsy : 100.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 342.0) & (original description: Putative ERF1B, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07913_128929-133637' '(at5g25390 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 348.0) & (original description: Putative AP2D35, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07926_688320-691035' '(at5g25190 : 151.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 302.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_175-2873' '(q40479|erf2_tobac : 315.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (at4g17500 : 155.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 310.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_318513-555449' '(q40478|erf5_tobac : 416.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 352.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_600171-602788' '(at5g07580 : 145.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 119.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 290.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_600189-602767' '(at5g07580 : 143.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 115.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 286.0) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08758_218895-222233' '(at2g30090 : 363.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, male gametophyte; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 320 Blast hits to 320 proteins in 91 species: Archae - 28; Bacteria - 42; Metazoa - 134; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative BnaC04g14700D, Description = BnaC04g14700D protein, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08965_18704-21273' '(at2g31230 : 101.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 202.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09191_20464-23282' '(q9lw49|erf4_nicsy : 129.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 113.0) no description available & (at5g44210 : 92.4) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative BnaA10g02160D, Description = BnaA10g02160D protein, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09236_43292-45948' '(q9sxs8|erf3_tobac : 164.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (at1g50640 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09550_127288-159799' '(at3g23150 : 773.0) Involved in ethylene perception in Arabidopsis; ethylene response 2 (ETR2); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G04580.2); Has 29902 Blast hits to 25922 proteins in 2098 species: Archae - 92; Bacteria - 25510; Metazoa - 11; Fungi - 1191; Plants - 1553; Viruses - 6; Other Eukaryotes - 1539 (source: NCBI BLink). & (gnl|cdd|35739 : 505.0) no description available & (o49230|etr1_braol : 451.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (gnl|cdd|83708 : 132.0) no description available & (reliability: 1546.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF00072;PF02518;PF00512;PF01590)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09704_261959-293616' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09854_32899-38064' '(at3g04580 : 823.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 450.0) no description available & (o81122|etr1_maldo : 439.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 104.0) no description available & (reliability: 1646.0) & (original description: Putative ETR5, Description = Ethylene receptor homolog, PFAM = PF01590;PF00072)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09882_162907-165703' '(at1g15360 : 181.0) Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.; SHINE 1 (SHN1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25390.2); Has 5918 Blast hits to 5765 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 9; Fungi - 23; Plants - 5843; Viruses - 2; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 362.0) & (original description: Putative WIN1, Description = Ethylene-responsive transcription factor WIN1, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf10785_203647-207151' '(gnl|cdd|47695 : 94.9) no description available & (at1g28160 : 93.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11424_103679-106548' '(q9lw49|erf4_nicsy : 186.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 112.0) no description available & (at5g44210 : 98.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11767_297690-313834' '(o48929|etr1_tobac : 1061.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 948.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 461.0) no description available & (gnl|cdd|83708 : 153.0) no description available & (reliability: 1896.0) & (original description: Putative ETR1, Description = Ethylene receptor 1, PFAM = PF02518;PF01590;PF00072)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11953_225325-232661' '(at3g04580 : 819.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 450.0) no description available & (o81122|etr1_maldo : 441.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 110.0) no description available & (reliability: 1638.0) & (original description: Putative EIN4, Description = Protein EIN4, PFAM = PF00072;PF01590)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf12210_659864-662667' '(q40478|erf5_tobac : 211.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 138.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 276.0) & (original description: Putative ERF3, Description = Ethylene response factor ERF3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf12210_834945-837526' '(gnl|cdd|47695 : 116.0) no description available & (at5g50080 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf13455_236295-238858' '(at3g23240 : 132.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q40479|erf2_tobac : 89.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 264.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf13779_18435-21127' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 99.8) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 199.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf15451_5793-17249' '(at3g23240 : 118.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (reliability: 236.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf19091_9322-60252' '(gnl|cdd|28902 : 95.7) no description available & (at1g24590 : 95.5) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1.; DORNROSCHEN-like (DRNL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: embryo, leaf primordium, seed; EXPRESSED DURING: C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12980.1); Has 5552 Blast hits to 5472 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5544; Viruses - 2; Other Eukaryotes - 6 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 85.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 190.2) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf20727_1-3401' '(at2g23060 : 575.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1140.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf23241_6948-9889' '(at5g47230 : 144.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 132.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 107.0) no description available & (reliability: 288.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 416.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold10462_64133-68733' '(at1g61660 : 139.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 270.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1256.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold45678_5162-8079' '(at3g16050 : 437.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 419.0) no description available & (q39963|pdx1_hevbr : 405.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 377.0) no description available & (reliability: 874.0) & (original description: Putative PDX12, Description = Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, PFAM = PF01680)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold46589_10570-16027' '(at3g20640 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold55257_4509-10426' '(at3g20640 : 192.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold1156_44662-50242' '(at1g09740 : 227.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|30165 : 97.5) no description available & (reliability: 454.0) & (original description: Putative BnaC08g13820D, Description = BnaC08g13820D protein, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold1249_101241-106698' '(at3g58680 : 143.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 114.0) no description available & (reliability: 286.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF08523)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 546.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3471_70376-76009' '(at4g29100 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3538_138424-247271' '(at3g11930 : 112.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaA03g32010D, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3790_39823-42712' '(at2g23610 : 221.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 196.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00003345ctg017_1-3816' '(at3g58680 : 175.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 130.0) no description available & (reliability: 350.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00007065ctg015_540-6115' '(at3g20640 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00015312ctg001_3320-7955' '(at3g20640 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00037540ctg002_9991-16258' '(at4g29100 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00212_172534-179819' '(at3g58680 : 175.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 132.0) no description available & (reliability: 350.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00220_187447-195616' '(at4g29100 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ACT1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00383_335681-340465' '(at1g27660 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 1680 Blast hits to 1555 proteins in 71 species: Archae - 0; Bacteria - 6; Metazoa - 95; Fungi - 29; Plants - 1158; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ACT1, Description = Transcription factor bHLH110, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00466_520875-524564' '(at3g62550 : 153.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G09740.1); Has 3064 Blast hits to 3005 proteins in 732 species: Archae - 271; Bacteria - 1876; Metazoa - 108; Fungi - 22; Plants - 723; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|84883 : 93.7) no description available & (reliability: 306.0) & (original description: Putative Sb03g012520, Description = Putative uncharacterized protein Sb03g012520, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00578_450235-455977' '(at3g20640 : 186.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01077_474248-479068' '(at1g05710 : 149.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31730.1). & (reliability: 298.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 576.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01147_513146-520846' '(at4g29100 : 158.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative B70, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01147_513649-519622' '(at4g29100 : 117.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative B70, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01341_290812-295656' '(at3g19500 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, root, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G49830.1); Has 1365 Blast hits to 1365 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative BHLH113, Description = Transcription factor bHLH113, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01587_175776-178213' '(at3g24500 : 152.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.; multiprotein bridging factor 1C (MBF1C); FUNCTIONS IN: transcription coactivator activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1). & (gnl|cdd|38608 : 121.0) no description available & (reliability: 304.0) & (original description: Putative MBF1C, Description = Multiprotein-bridging factor 1c, PFAM = PF08523;PF01381)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01681_502545-507376' '(at1g05710 : 133.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31730.1). & (reliability: 266.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf02406_411931-415283' '(at2g23610 : 218.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 197.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative MES8, Description = Methylesterase 8, PFAM = PF12697)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf02440_122-4787' '(at3g20640 : 165.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03385_371250-375634' '(at3g19500 : 141.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, root, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G49830.1); Has 1365 Blast hits to 1365 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BHLH113, Description = Transcription factor bHLH113, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03422_249932-258406' '(at4g29100 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03670_429283-434645' '(at1g09740 : 228.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|30165 : 97.5) no description available & (reliability: 456.0) & (original description: Putative BnaC08g13820D, Description = BnaC08g13820D protein, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf04236_225-5530' '(at3g58680 : 156.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 133.0) no description available & (reliability: 312.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf04489_66610-69805' '(at3g16050 : 431.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 413.0) no description available & (q39963|pdx1_hevbr : 397.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 369.0) no description available & (reliability: 862.0) & (original description: Putative pdxS, Description = Pyridoxal 5'-phosphate synthase subunit PdxS, PFAM = PF01680)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf05413_497055-502837' '(at3g20640 : 176.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf06030_24332-33238' '(at4g29100 : 259.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative BHLH68, Description = Transcription factor bHLH68, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf07761_25253-27633' '(gnl|cdd|47695 : 93.4) no description available & (at3g23220 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G23230.1); Has 5797 Blast hits to 5590 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5785; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 80.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 168.0) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1264.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf09610_85177-89969' '(at3g11930 : 168.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 336.0) & (original description: Putative BnaA05g27170D, Description = BnaA05g27170D protein, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf09610_92253-109559' '(at3g11930 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 314.0) & (original description: Putative Sb01g021200, Description = Putative uncharacterized protein Sb01g021200, PFAM = PF00582)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf10566_91581-99287' '(at1g27660 : 196.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 1680 Blast hits to 1555 proteins in 71 species: Archae - 0; Bacteria - 6; Metazoa - 95; Fungi - 29; Plants - 1158; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf15419_157029-164865' '(at1g55150 : 734.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 593.0) no description available & (p46942|db10_nicsy : 433.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00270;PF00271)' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf27908_177338-181997' '(at1g61660 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 266.0) & (original description: Putative ACT1, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T
'17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf33352_12075-38896' '(at1g55150 : 763.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 597.0) no description available & (p46942|db10_nicsy : 439.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1526.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00271;PF00270)' T
'17.6' 'hormone metabolism.gibberelin' '' ''
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'nbv0.5scaffold278_887388-893715' '(at1g52800 : 307.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 216.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (o04707|gao1a_wheat : 94.7) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 614.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 244.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00015177ctg017_633-2208' '(at1g52800 : 101.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 202.0) & (original description: Putative PGSC0003DMG400026033, Description = , PFAM = PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00046222ctg001_1-4690' '(at3g46500 : 264.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 7979 Blast hits to 7962 proteins in 970 species: Archae - 0; Bacteria - 1125; Metazoa - 119; Fungi - 1055; Plants - 4286; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|33294 : 145.0) no description available & (gnl|cdd|35365 : 144.0) no description available & (reliability: 528.0) & (original description: Putative At1g35190, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00123_8153-11588' '(at1g52820 : 265.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 179.0) no description available & (gnl|cdd|33294 : 98.8) no description available & (q8rvf5|gaox2_orysa : 95.9) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative BnaA06g01850D, Description = BnaA06g01850D protein, PFAM = PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_236135-241098' '(at1g52790 : 333.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 240.0) no description available & (gnl|cdd|33294 : 103.0) no description available & (p93771|gaox1_orysa : 81.6) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative BnaA06g37440D, Description = BnaA06g37440D protein, PFAM = PF14226;PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_397269-400864' '(at1g52800 : 345.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 218.0) no description available & (gnl|cdd|33294 : 91.5) no description available & (reliability: 690.0) & (original description: Putative BnaC06g05700D, Description = BnaC06g05700D protein, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_419462-423624' '(at1g52820 : 457.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 272.0) no description available & (gnl|cdd|33294 : 130.0) no description available & (q8rvf5|gaox2_orysa : 95.1) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 914.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_420522-423418' '(at1g52820 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 116.0) no description available & (gnl|cdd|33294 : 85.0) no description available & (reliability: 334.0) & (original description: Putative AOP1, Description = 2-oxoglutarate-dependent dioxygenase, PFAM = PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00878_82646-86608' '(at1g52800 : 245.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 191.0) no description available & (gnl|cdd|33294 : 106.0) no description available & (reliability: 490.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf02426_241824-246869' '(at4g21200 : 354.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 242.0) no description available & (o04706|gao1b_wheat : 159.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 153.0) no description available & (reliability: 708.0) & (original description: Putative GA2ox4, Description = Gibberellin biosynthesis-related protein GA2ox4, PFAM = PF14226;PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf02858_38107-66211' '(at4g16770 : 385.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, flavonoid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G16765.1); Has 6583 Blast hits to 6566 proteins in 839 species: Archae - 0; Bacteria - 934; Metazoa - 52; Fungi - 818; Plants - 3817; Viruses - 0; Other Eukaryotes - 962 (source: NCBI BLink). & (gnl|cdd|33294 : 243.0) no description available & (gnl|cdd|35365 : 241.0) no description available & (q07512|fls_pethy : 112.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (reliability: 770.0) & (original description: Putative efe, Description = 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf03313_121313-129616' '(at4g21200 : 360.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (o04706|gao1b_wheat : 154.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 149.0) no description available & (reliability: 720.0) & (original description: Putative GA2ox4, Description = Gibberellin biosynthesis-related protein GA2ox4, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf03898_356915-368890' '(at4g21200 : 401.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (o04705|gao1d_wheat : 130.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 802.0) & (original description: Putative GA2OX8, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf06113_298561-310304' '(at4g21200 : 427.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 250.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (p93771|gaox1_orysa : 154.0) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative GA2OX8, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF14226;PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf10196_10759-13785' '(at4g23340 : 400.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 252.0) no description available & (gnl|cdd|33294 : 164.0) no description available & (o04706|gao1b_wheat : 126.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 800.0) & (original description: Putative BnaA03g45910D, Description = BnaA03g45910D protein, PFAM = PF14226;PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf13608_81037-84399' '(at4g23340 : 371.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (o04707|gao1a_wheat : 132.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 742.0) & (original description: Putative PGSC0003DMG400015796, Description = Gibberellin 20 oxidase 1-B, PFAM = PF14226;PF03171)' T
'17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf17767_64259-68202' '(at1g52800 : 286.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 115.0) no description available & (o04706|gao1b_wheat : 85.9) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 572.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF14226;PF03171)' T
'17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'nbv0.3scaffold25628_4987-15955' '(o04408|ksa_pea : 872.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 839.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 365.0) no description available & (reliability: 1678.0) & (original description: Putative cps, Description = Copalyl diphosphate, PFAM = PF01397;PF03936)' T
'17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'nbv0.5scaffold1557_10917-38714' '(o04408|ksa_pea : 651.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 625.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 307.0) no description available & (reliability: 1250.0) & (original description: Putative CPS2, Description = Copal-8-ol diphosphate hydratase, chloroplastic, PFAM = PF01397;PF03936)' T
'17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'niben044scf00009452ctg015_1-8299' '(at4g02780 : 274.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 262.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 548.0) & (original description: Putative ac22, Description = Copalyl diphosphate synthase, PFAM = )' T
'17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'niben101scf05559_51908-65326' '(o04408|ksa_pea : 890.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 862.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 377.0) no description available & (reliability: 1724.0) & (original description: Putative cps, Description = Copalyl diphosphate, PFAM = PF03936;PF01397)' T
'17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'nbv0.3scaffold6347_8899-14117' '(q39548|ksb_cucma : 203.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 185.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative KS, Description = Ent-kaurene synthase, PFAM = )' T
'17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'nbv0.5scaffold368_228354-237716' '(q39548|ksb_cucma : 776.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 731.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 421.0) no description available & (reliability: 1462.0) & (original description: Putative ks3L, Description = Kaurene synthase, PFAM = PF03936;PF01397)' T
'17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf00885_68173-71977' '(q39548|ksb_cucma : 138.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 136.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ag1, Description = Ent-kaurene synthase, PFAM = )' T
'17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf02461_401687-411155' '(q39548|ksb_cucma : 760.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 717.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 413.0) no description available & (reliability: 1434.0) & (original description: Putative ks3L, Description = Kaurene synthase, PFAM = PF03936;PF01397)' T
'17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf02461_402149-411158' '(q39548|ksb_cucma : 607.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 563.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 425.0) no description available & (reliability: 1126.0) & (original description: Putative TPS1, Description = Acyclic sesquiterpene synthase, PFAM = PF01397;PF03936)' T
'17.6.1.3' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene oxidase' 'niben101scf02322_813252-818804' '(at5g25900 : 524.0) Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.; GA requiring 3 (GA3); FUNCTIONS IN: oxygen binding; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway, ent-kaurene oxidation to kaurenoic acid; LOCATED IN: chloroplast outer membrane, endoplasmic reticulum, microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 285.0) no description available & (gnl|cdd|84486 : 207.0) no description available & (o48956|c98a1_sorbi : 189.0) Cytochrome P450 98A1 (EC 1.14.-.-) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (reliability: 1048.0) & (original description: Putative ko, Description = Ent-kaurene oxidase, PFAM = PF00067;PF00067)' T
'17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben044scf00042696ctg006_1-1472' '(at2g32440 : 85.1) ent-kaurenoic acid hydroxylase (KAO2); ent-kaurenoic acid hydroxylase 2 (KAO2); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 88, subfamily A, polypeptide 3 (TAIR:AT1G05160.1). & (reliability: 170.2) & (original description: Putative CYP88C1, Description = Cytochrome P450 monooxygenase, PFAM = )' T
'17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben101scf02437_2408-8226' '(at2g32440 : 339.0) ent-kaurenoic acid hydroxylase (KAO2); ent-kaurenoic acid hydroxylase 2 (KAO2); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 88, subfamily A, polypeptide 3 (TAIR:AT1G05160.1). & (q9axh9|kao1_horvu : 292.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|35379 : 221.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (reliability: 678.0) & (original description: Putative CYP88D6, Description = Beta-amyrin 11-oxidase, PFAM = PF00067)' T
'17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben101scf07482_58899-65328' '(at1g05160 : 700.0) Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.; "cytochrome P450, family 88, subfamily A, polypeptide 3" (CYP88A3); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ent-kaurenoic acid hydroxylase 2 (TAIR:AT2G32440.2); Has 36129 Blast hits to 36053 proteins in 1833 species: Archae - 82; Bacteria - 8530; Metazoa - 11168; Fungi - 6175; Plants - 8031; Viruses - 6; Other Eukaryotes - 2137 (source: NCBI BLink). & (q9axh9|kao1_horvu : 605.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|35379 : 279.0) no description available & (gnl|cdd|32307 : 198.0) no description available & (reliability: 1400.0) & (original description: Putative KAO1, Description = Ent-kaurenoic acid oxidase 1, PFAM = PF00067)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'nbv0.5scaffold849_175083-179359' '(at4g25420 : 504.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04706|gao1b_wheat : 501.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (reliability: 1008.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 264.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf01036_303268-307466' '(gnl|cdd|35365 : 266.0) no description available & (at5g07200 : 206.0) encodes a gibberellin 20-oxidase.; gibberellin 20-oxidase 3 (GA20OX3); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20-oxidase 4 (TAIR:AT1G60980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04706|gao1b_wheat : 203.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 188.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf02083_313971-317570' '(at4g25420 : 515.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04705|gao1d_wheat : 500.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 291.0) no description available & (gnl|cdd|33294 : 173.0) no description available & (reliability: 1030.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 244.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06024_166351-171824' '(o04705|gao1d_wheat : 471.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (at4g25420 : 456.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 169.0) no description available & (reliability: 912.0) & (original description: Putative GA20ox1D, Description = Gibberellin 20 oxidase 1-D, PFAM = PF14226;PF03171)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06078_374466-378001' '(gnl|cdd|35365 : 274.0) no description available & (at4g25420 : 206.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04707|gao1a_wheat : 200.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 193.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF14226;PF03171)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06404_122-4222' '(o04705|gao1d_wheat : 472.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (at4g25420 : 450.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (gnl|cdd|35365 : 292.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (reliability: 900.0) & (original description: Putative GA20ox1D, Description = Gibberellin 20 oxidase 1-D, PFAM = PF14226;PF03171)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf10027_73837-78161' '(at4g25420 : 503.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04706|gao1b_wheat : 498.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 183.0) no description available & (reliability: 1006.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf13608_81037-84399' '(at4g23340 : 371.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (o04707|gao1a_wheat : 132.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 686.0) & (original description: Putative PGSC0003DMG400015796, Description = Gibberellin 20 oxidase 1-B, PFAM = PF14226;PF03171)' T
'17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf18902_36260-50140' '(o04706|gao1b_wheat : 356.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (at5g51810 : 352.0) Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.; gibberellin 20 oxidase 2 (GA20OX2); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25420.1); Has 8534 Blast hits to 8499 proteins in 990 species: Archae - 0; Bacteria - 1114; Metazoa - 120; Fungi - 1000; Plants - 4903; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink). & (gnl|cdd|35365 : 271.0) no description available & (gnl|cdd|33294 : 156.0) no description available & (reliability: 704.0) & (original description: Putative GA20OX5, Description = Gibberellin 20 oxidase 5, PFAM = PF03171;PF14226)' T
'17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben044scf00019083ctg001_747-4271' '(at1g15550 : 399.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 308.0) no description available & (q3i409|g3o23_wheat : 277.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 798.0) & (original description: Putative LE, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T
'17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben101scf04424_8529-12464' '(at1g15550 : 397.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 303.0) no description available & (q3i409|g3o23_wheat : 271.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 161.0) no description available & (reliability: 794.0) & (original description: Putative LE, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T
'17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben101scf04820_492105-495629' '(at1g15550 : 400.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 305.0) no description available & (q3i409|g3o23_wheat : 276.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 167.0) no description available & (reliability: 800.0) & (original description: Putative GA3OX1, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'nbv0.5scaffold215_616177-619358' '(q9sq80|g2ox1_pea : 456.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 382.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 257.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 764.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'nbv0.5scaffold8289_36729-40335' '(q9sq80|g2ox1_pea : 414.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 405.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 230.0) no description available & (gnl|cdd|33294 : 129.0) no description available & (reliability: 810.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00004282ctg023_13609-17271' '(q9sq80|g2ox1_pea : 405.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 394.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 222.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (reliability: 788.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF14226;PF03171)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00024535ctg003_4195-8820' '(q9sq80|g2ox1_pea : 448.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 367.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 250.0) no description available & (gnl|cdd|33294 : 149.0) no description available & (reliability: 734.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00040048ctg012_352-3705' '(q9sq80|g2ox1_pea : 446.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 379.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 257.0) no description available & (gnl|cdd|33294 : 149.0) no description available & (reliability: 758.0) & (original description: Putative GA2ox1, Description = Gibberellin 2-oxidase 1, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00044232ctg006_15605-21462' '(q9sq80|g2ox1_pea : 412.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 396.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 229.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 792.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf01517_393760-398086' '(q9sq80|g2ox1_pea : 449.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 367.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 249.0) no description available & (gnl|cdd|33294 : 146.0) no description available & (reliability: 734.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf02589_691998-699143' '(q9xhm5|g2ox2_pea : 375.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 330.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 263.0) no description available & (gnl|cdd|33294 : 138.0) no description available & (reliability: 660.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf03094_311684-317771' '(q9sq80|g2ox1_pea : 422.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 405.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 227.0) no description available & (gnl|cdd|33294 : 121.0) no description available & (reliability: 810.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf04316_296148-299331' '(q9sq80|g2ox1_pea : 449.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 382.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 258.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 764.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf04316_457259-462157' '(q9sq80|g2ox1_pea : 439.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 379.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 251.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 758.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf06412_385670-390809' '(q9xhm5|g2ox2_pea : 406.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 337.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 221.0) no description available & (gnl|cdd|33294 : 127.0) no description available & (reliability: 674.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T
'17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf10232_223810-232734' '(q9xhm5|g2ox2_pea : 375.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 314.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 232.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (reliability: 628.0) & (original description: Putative GA2OX4, Description = Gibberellin 2-beta-dioxygenase 4, PFAM = PF03171;PF14226)' T
'17.6.1.1001' 'hormone metabolism.gibberelin.synthesis-degradation' 'gibberellate (ga3)' 'hormone metabolism.gibberelin' M
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold277_65479-69095' '(gnl|cdd|67150 : 206.0) no description available & (at1g66350 : 196.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 392.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold15044_36354-40012' '(q8s4w7|gai1_vitvi : 706.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 625.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1250.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold61880_1373-11389' '(at3g63010 : 522.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 426.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 294.0) no description available & (gnl|cdd|87389 : 189.0) no description available & (reliability: 1044.0) & (original description: Putative gid1, Description = Putative GID1 protein, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold96831_1405-4443' '(at3g63010 : 588.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 471.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 326.0) no description available & (gnl|cdd|87389 : 197.0) no description available & (reliability: 1176.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold135547_1-1448' '(q84tq7|gai_goshi : 540.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 486.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (reliability: 972.0) & (original description: Putative d8, Description = DELLA protein DWARF8, PFAM = PF03514;PF12041)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 352.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold76_1196935-1200892' '(q8s4w7|gai1_vitvi : 703.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 626.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 356.0) no description available & (reliability: 1252.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold2121_169234-179516' '(at3g63010 : 525.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 431.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 294.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (reliability: 1050.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00010041ctg003_1496-5321' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 661.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 352.0) no description available & (reliability: 1322.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00031891ctg004_32273-41477' '(o82039|spy_pethy : 812.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 687.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 536.0) no description available & (gnl|cdd|33700 : 301.0) no description available & (reliability: 1374.0) & (original description: Putative spyA, Description = Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13844;PF13844)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00047250ctg000_253-3566' '(at5g37490 : 341.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 109.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.1) no description available & (reliability: 682.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00057436ctg000_7041-10651' '(gnl|cdd|67150 : 245.0) no description available & (q8s4w7|gai1_vitvi : 238.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 237.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative GRAS34, Description = GRAS34 protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00100_64204-83573' '(at3g63010 : 554.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 442.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 323.0) no description available & (gnl|cdd|87389 : 199.0) no description available & (reliability: 1108.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00144_94458-114140' '(o82039|spy_pethy : 1712.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 1469.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 1070.0) no description available & (gnl|cdd|33700 : 313.0) no description available & (reliability: 2938.0) & (original description: Putative SPY, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13374;PF13432;PF00515;PF00515;PF00515;PF00515;PF13844;PF13844)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00247_264900-268516' '(at3g63010 : 591.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 461.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 321.0) no description available & (gnl|cdd|87389 : 197.0) no description available & (reliability: 1182.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00927_851350-854681' '(at5g37490 : 287.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 110.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.0) no description available & (reliability: 574.0) & (original description: Putative ACRE74, Description = Avr9/Cf-9 rapidly elicited protein 74, PFAM = PF04564)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00984_936748-940082' '(at5g37490 : 267.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 112.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.5) no description available & (reliability: 534.0) & (original description: Putative CMPG, Description = CMPG, PFAM = PF04564)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01221_596296-599615' '(gnl|cdd|67150 : 176.0) no description available & (at1g66350 : 130.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ei06|gaip_cucma : 121.0) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 260.0) & (original description: Putative GRAS41, Description = DELLA protein GAI1, putative, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 200.0) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 364.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01626_526854-530521' '(at5g27320 : 545.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1C (GID1C); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6l545|gid1_orysa : 434.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 326.0) no description available & (gnl|cdd|87389 : 196.0) no description available & (reliability: 1090.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01795_907057-910370' '(at5g37490 : 367.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 118.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.8) no description available & (reliability: 734.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02111_1694588-1698204' '(gnl|cdd|67150 : 207.0) no description available & (at3g03450 : 197.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 392.0) & (original description: Putative GRAS41, Description = GRAS41 protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02612_8996-12797' '(q8s4w7|gai1_vitvi : 697.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 643.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 323.0) no description available & (reliability: 1286.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 710.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf05301_247452-251065' '(at3g63010 : 584.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 466.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 323.0) no description available & (gnl|cdd|87389 : 195.0) no description available & (reliability: 1168.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf07850_804306-832346' '(o82039|spy_pethy : 1689.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 1466.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 1068.0) no description available & (gnl|cdd|33700 : 315.0) no description available & (reliability: 2932.0) & (original description: Putative SPY, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13374;PF13844;PF13844;PF00515;PF00515;PF00515;PF00515)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf07850_810711-813346' '(o82039|spy_pethy : 216.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 199.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 172.0) no description available & (gnl|cdd|33700 : 87.0) no description available & (reliability: 398.0) & (original description: Putative OGT1, Description = Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13844)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf08855_264814-268163' '(at5g37490 : 304.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 130.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.1) no description available & (reliability: 608.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf11723_265857-269459' '(at3g63010 : 582.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 459.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 316.0) no description available & (gnl|cdd|87389 : 194.0) no description available & (reliability: 1164.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf15120_90709-94468' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 635.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1270.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf15156_91141-94812' '(at5g27320 : 539.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1C (GID1C); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6l545|gid1_orysa : 435.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 328.0) no description available & (gnl|cdd|87389 : 199.0) no description available & (reliability: 1078.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold15044_36354-40012' '(q8s4w7|gai1_vitvi : 706.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 625.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1250.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold50127_12169-15132' '(gnl|cdd|66395 : 94.7) no description available & (at1g74670 : 83.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative gip4, Description = Gip1-like protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold101147_694-3898' '(gnl|cdd|66395 : 100.0) no description available & (at1g74670 : 96.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative GASA4, Description = Gibberellin-regulated protein 4, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold135547_1-1448' '(q84tq7|gai_goshi : 540.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 486.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (reliability: 964.0) & (original description: Putative d8, Description = DELLA protein DWARF8, PFAM = PF03514;PF12041)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 336.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold76_1196935-1200892' '(q8s4w7|gai1_vitvi : 703.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 626.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 356.0) no description available & (reliability: 1240.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 310.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold11244_622-3906' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 100.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00004662ctg016_921-3968' '(gnl|cdd|66395 : 102.0) no description available & (at1g74670 : 100.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00010041ctg003_1496-5321' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 661.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 352.0) no description available & (reliability: 1318.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00012486ctg021_14907-18388' '(gnl|cdd|66395 : 92.0) no description available & (at1g22690 : 85.9) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 171.8) & (original description: Putative GASA9, Description = Gibberellin-regulated protein 9, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00019582ctg002_15716-18767' '(at5g14920 : 82.8) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00026717ctg010_4434-9082' '(at5g14920 : 87.0) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (gnl|cdd|66395 : 83.5) no description available & (reliability: 174.0) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00036535ctg001_17309-20958' '(gnl|cdd|66395 : 104.0) no description available & (at1g74670 : 96.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative gip5, Description = Gip1-like protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00135_17253-20794' '(gnl|cdd|66395 : 94.3) no description available & (at1g22690 : 82.8) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 165.6) & (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00142_152293-155246' '(at4g14465 : 183.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 364.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00146_14513-19161' '(at5g14920 : 89.0) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (gnl|cdd|66395 : 85.1) no description available & (reliability: 178.0) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 344.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01578_23579-27044' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 95.1) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01634_88536-102703' '(gnl|cdd|66395 : 89.7) no description available & (at1g74670 : 80.5) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01702_331568-334240' '(gnl|cdd|66395 : 93.9) no description available & (at1g75750 : 88.2) GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data; GAST1 protein homolog 1 (GASA1); CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 176.4) & (original description: Putative GASA, Description = GA-stimulated protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01799_12930-15922' '(gnl|cdd|66395 : 85.1) no description available & (at1g74670 : 81.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01847_102367-105637' '(gnl|cdd|66395 : 93.1) no description available & (at1g22690 : 80.5) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 161.0) & (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf02612_8996-12797' '(q8s4w7|gai1_vitvi : 697.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 643.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 323.0) no description available & (reliability: 1282.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 698.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf03944_673424-676377' '(at3g55560 : 161.0) AT-hook protein of GA feedback 2 (AGF2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 804 Blast hits to 798 proteins in 45 species: Archae - 0; Bacteria - 14; Metazoa - 18; Fungi - 6; Plants - 758; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 322.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04411_325930-330380' '(at1g74670 : 89.4) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 88.1) no description available & (reliability: 178.8) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04495_41289-44238' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 88.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative gip1, Description = Gibberellin-induced protein 1, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf06249_46552-50072' '(at1g74670 : 120.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 95.8) no description available & (reliability: 240.0) & (original description: Putative gip5, Description = Gip1-like protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf09092_274774-278563' '(gnl|cdd|66395 : 93.9) no description available & (at1g22690 : 80.9) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 161.8) & (original description: Putative GASA9, Description = Gibberellin-regulated protein 9, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf11251_116717-119269' '(at5g15230 : 114.0) gibberellin-regulated (GASA4); GAST1 protein homolog 4 (GASA4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, gibberellic acid mediated signaling pathway; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT1G74670.1); Has 474 Blast hits to 474 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 93.5) no description available & (reliability: 228.0) & (original description: Putative gip4, Description = Gip1-like protein, PFAM = PF02704)' T
'17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf15120_90709-94468' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 635.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1262.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T
'17.7' 'hormone metabolism.jasmonate' '' ''
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.3scaffold17972_21210-36005' '(at4g36910 : 212.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 83.6) no description available & (reliability: 408.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.5scaffold414_274001-348509' '(at4g36910 : 247.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 98.1) no description available & (reliability: 476.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.5scaffold3352_205636-222897' '(at4g36910 : 238.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 92.6) no description available & (reliability: 442.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben044scf00002391ctg020_4737-9976' '(at4g36910 : 142.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf00280_163898-178605' '(at4g36910 : 286.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 103.0) no description available & (reliability: 518.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf03009_520724-532775' '(at4g36910 : 276.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 102.0) no description available & (reliability: 516.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf05135_667791-711776' '(at4g36910 : 261.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 99.6) no description available & (reliability: 492.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf05135_693850-714143' '(at4g36910 : 222.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 83.4) no description available & (reliability: 414.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf06344_101468-112720' '(at4g36910 : 254.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 96.4) no description available & (reliability: 504.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf12919_49053-57883' '(at4g34120 : 253.0) LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G36910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73086 : 97.5) no description available & (reliability: 506.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben044scf00002678ctg018_176-3075' '(at2g44810 : 455.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 171.0) no description available & (gnl|cdd|73213 : 134.0) no description available & (reliability: 910.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf01188_916116-919423' '(at2g44810 : 436.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 176.0) no description available & (gnl|cdd|73213 : 128.0) no description available & (reliability: 872.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02386_66443-121581' '(at2g44810 : 441.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 179.0) no description available & (gnl|cdd|73213 : 131.0) no description available & (reliability: 882.0) & (original description: Putative DAD1F, Description = Defective in anther dehiscence 1, PFAM = PF01764)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02386_118499-121806' '(at2g44810 : 440.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 177.0) no description available & (gnl|cdd|73213 : 129.0) no description available & (reliability: 880.0) & (original description: Putative Os11g0146600, Description = Lipase family protein, PFAM = PF01764)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02400_304500-307588' '(at2g44810 : 423.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 178.0) no description available & (gnl|cdd|73213 : 135.0) no description available & (reliability: 846.0) & (original description: Putative DAD1F, Description = Defective in anther dehiscence 1, PFAM = PF01764)' T
'17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf05795_30454-33845' '(at2g44810 : 419.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 156.0) no description available & (gnl|cdd|73213 : 126.0) no description available & (reliability: 838.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben044scf00001604ctg001_1-6153' '(at3g22400 : 1233.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1199.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 1015.0) no description available & (reliability: 2466.0) & (original description: Putative lox1, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben044scf00008988ctg002_389-2804' '(at3g45140 : 186.0) Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.; lipoxygenase 2 (LOX2); FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G67560.1); Has 1459 Blast hits to 1423 proteins in 177 species: Archae - 0; Bacteria - 74; Metazoa - 524; Fungi - 48; Plants - 784; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8gsm2|lox23_horvu : 181.0) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3) - Hordeum vulgare (Barley) & (gnl|cdd|84680 : 143.0) no description available & (reliability: 372.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01073_102352-113250' '(at1g67560 : 1092.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 916.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 796.0) no description available & (reliability: 2184.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01375_912253-917492' '(p37831|lox1_soltu : 1031.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 971.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 955.0) no description available & (reliability: 1942.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_343249-354375' '(p37831|lox1_soltu : 1401.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1220.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1061.0) no description available & (reliability: 2440.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_355326-361137' '(p37831|lox1_soltu : 1148.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1075.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1010.0) no description available & (reliability: 2150.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_368604-374485' '(p37831|lox1_soltu : 1202.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1134.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1008.0) no description available & (reliability: 2268.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf02688_237640-248728' '(at3g45140 : 1016.0) Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.; lipoxygenase 2 (LOX2); FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G67560.1); Has 1459 Blast hits to 1423 proteins in 177 species: Archae - 0; Bacteria - 74; Metazoa - 524; Fungi - 48; Plants - 784; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8gsm2|lox23_horvu : 1007.0) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3) - Hordeum vulgare (Barley) & (gnl|cdd|84680 : 858.0) no description available & (reliability: 2032.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf02749_99093-105939' '(at1g17420 : 1350.0) Lipoxygenase; lipoxygenase 3 (LOX3); FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, response to fungus, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1470 Blast hits to 1436 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 529; Fungi - 49; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 1166.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 795.0) no description available & (reliability: 2700.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf04506_422571-429967' '(at1g67560 : 1090.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 909.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 792.0) no description available & (reliability: 2180.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf05407_72710-80760' '(at3g22400 : 769.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 752.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 711.0) no description available & (reliability: 1538.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf06364_20084-27108' '(p37831|lox1_soltu : 1431.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1164.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1057.0) no description available & (reliability: 2328.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf08869_12898-19985' '(at3g22400 : 1233.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1199.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 1023.0) no description available & (reliability: 2466.0) & (original description: Putative lox1, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf08869_132525-139452' '(at3g22400 : 1070.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1036.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 941.0) no description available & (reliability: 2140.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf18951_21738-41000' '(at1g67560 : 961.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 815.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 740.0) no description available & (reliability: 1922.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf01574_21901-25343' '(at5g42650 : 459.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xys3|c74a2_orysa : 417.0) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase 2) (Hydroperoxide dehydrase 2) - Oryza sativa (Rice) & (reliability: 918.0) & (original description: Putative AOS3, Description = Allene oxide synthase 3, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf01574_141360-144784' '(at5g42650 : 486.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 449.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 972.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf04787_83310-120518' '(at5g42650 : 509.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 461.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (gnl|cdd|35378 : 80.3) no description available & (reliability: 1018.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf04787_224455-228356' '(at5g42650 : 446.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 431.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 892.0) & (original description: Putative DES, Description = 9-divinyl ether synthase, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf05799_259379-263016' '(at5g42650 : 658.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 582.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative AOS1, Description = Allene oxide synthase 1, chloroplastic, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf07309_7336-10895' '(at5g42650 : 623.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 556.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1246.0) & (original description: Putative aos, Description = Allene oxide synthase, PFAM = PF00067)' T
'17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf07709_21455-27428' '(at5g42650 : 510.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 457.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1020.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T
'17.7.1.4' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase' 'niben101scf02772_247600-250531' '(gnl|cdd|87067 : 318.0) no description available & (at3g25780 : 244.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T
'17.7.1.4' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase' 'niben101scf13816_150134-153064' '(gnl|cdd|87067 : 317.0) no description available & (at3g25780 : 246.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'nbv0.3scaffold16853_1-6048' '(at2g06050 : 616.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 463.0) no description available & (gnl|cdd|35356 : 365.0) no description available & (reliability: 1232.0) & (original description: Putative opr3, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'nbv0.5scaffold3799_212742-215272' '(at1g76690 : 228.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 220.0) no description available & (gnl|cdd|35356 : 179.0) no description available & (reliability: 456.0) & (original description: Putative opr2, Description = 12-oxophytodienoate reductase 2, PFAM = PF00724)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf00408_267433-272391' '(at1g76690 : 617.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 485.0) no description available & (gnl|cdd|35356 : 403.0) no description available & (reliability: 1234.0) & (original description: Putative OPR1, Description = 12-oxophytodienoate reductase 1, PFAM = PF00724)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf00779_654271-659459' '(at1g76690 : 623.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 493.0) no description available & (gnl|cdd|35356 : 408.0) no description available & (reliability: 1246.0) & (original description: Putative OPR2, Description = 12-oxophytodienoate reductase 2, PFAM = PF00724)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf02467_147245-156773' '(at2g06050 : 457.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 293.0) no description available & (gnl|cdd|35356 : 253.0) no description available & (reliability: 914.0) & (original description: Putative opr, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724;PF00724;PF00724)' T
'17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf05804_312331-331077' '(at2g06050 : 606.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 458.0) no description available & (gnl|cdd|35356 : 356.0) no description available & (reliability: 1212.0) & (original description: Putative opr3, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 372.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 540.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf03560_271440-277924' '(gnl|cdd|86349 : 374.0) no description available & (at1g19640 : 346.0) Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.; jasmonic acid carboxyl methyltransferase (JMT); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 890 Blast hits to 871 proteins in 121 species: Archae - 0; Bacteria - 61; Metazoa - 9; Fungi - 5; Plants - 740; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q9fyz9|bamt_antma : 245.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 692.0) & (original description: Putative JMT, Description = Jasmonate O-methyltransferase, PFAM = PF03492)' T
'17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 456.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.7.1.1001' 'hormone metabolism.jasmonate.synthesis-degradation' 'oxophytodienoic acid' 'hormone metabolism.jasmonate. Precursor of jasmonic acid' M
'17.7.1.1002' 'hormone metabolism.jasmonate.synthesis-degradation' 'jasmonic acid' 'hormone metabolism.jasmonate' M
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'nbv0.3scaffold36634_4334-8058' '(at1g19180 : 129.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SlSRG1, Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben044scf00030612ctg004_2267-7679' '(at3g17860 : 128.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben044scf00049424ctg007_6209-11857' '(at3g17860 : 140.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF09425;PF06200)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf00298_88653-92313' '(at1g19180 : 124.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TIFY10A, Description = Protein TIFY 10A, PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf01940_120160-125186' '(at3g17860 : 124.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF09425;PF06200)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf02919_291828-298610' '(at3g17860 : 90.1) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf04892_1-5900' '(at3g17860 : 99.8) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative , Description = , PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf08390_853833-859303' '(at3g17860 : 129.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF09425;PF06200)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf09028_138080-143088' '(at3g17860 : 118.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf16657_78927-81633' '(at1g19180 : 132.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative JAZ1, Description = BnaA09g44300D protein, PFAM = PF06200;PF09425)' T
'17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf34602_3082-6794' '(at1g19180 : 133.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T
'17.7.3' 'hormone metabolism.jasmonate.induced-regulated-responsive-activated' '' ''
'17.8' 'hormone metabolism.salicylic acid' '' ''
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 336.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold4129_168507-171886' '(at1g05670 : 212.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 424.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF12854)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 398.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00006077ctg025_3245-7181' '(at1g05680 : 380.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 290.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 111.0) no description available & (reliability: 760.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 502.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00020943ctg015_11409-16047' '(at1g05670 : 878.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 265.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1756.0) & (original description: Putative At1g05670, Description = Pentatricopeptide repeat-containing protein At1g05670, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 586.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 820.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 876.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 818.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00927_274221-277870' '(gnl|cdd|86349 : 291.0) no description available & (at1g68040 : 231.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 110.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 462.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01017_305263-309338' '(at1g05680 : 381.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 285.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 198.0) no description available & (gnl|cdd|79510 : 108.0) no description available & (reliability: 762.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01146_1201265-1205921' '(gnl|cdd|86349 : 254.0) no description available & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g04370 : 180.0) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.; NAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 935 Blast hits to 920 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 729; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative samt, Description = Salicylic acid methyl transferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01163_81954-86964' '(gnl|cdd|86349 : 373.0) no description available & (q9fyz9|bamt_antma : 311.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g66430 : 292.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01225_244495-251830' '(at1g05680 : 448.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 328.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 200.0) no description available & (gnl|cdd|79510 : 110.0) no description available & (reliability: 896.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_58079-61712' '(gnl|cdd|86349 : 328.0) no description available & (at1g68040 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 161.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 602.0) & (original description: Putative At5g38100, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38100, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_155933-167439' '(gnl|cdd|86349 : 326.0) no description available & (at1g68040 : 290.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 171.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 580.0) & (original description: Putative At5g37970, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g37970, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_163539-166919' '(gnl|cdd|86349 : 236.0) no description available & (at1g68040 : 210.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 141.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 420.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 842.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf05931_132518-139002' '(at4g36470 : 452.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|86349 : 339.0) no description available & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 904.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf06603_146652-160645' '(at3g16710 : 176.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G41170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 338.0) & (original description: Putative , Description = , PFAM = PF12854;PF01535;PF01535;PF13041;PF13041)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf08194_206577-210902' '(at4g36470 : 432.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|86349 : 346.0) no description available & (q9fyz9|bamt_antma : 237.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 864.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_11856-15632' '(at1g05680 : 388.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 293.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 202.0) no description available & (gnl|cdd|79510 : 118.0) no description available & (reliability: 776.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_212562-216935' '(at1g05680 : 318.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 236.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 176.0) no description available & (gnl|cdd|79510 : 113.0) no description available & (reliability: 636.0) & (original description: Putative PGT, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_212586-216989' '(at1g05680 : 403.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 315.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 196.0) no description available & (gnl|cdd|79510 : 114.0) no description available & (reliability: 806.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf12922_62197-65595' '(at1g05670 : 203.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 189.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF12854;PF12854;PF01535;PF01535)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 496.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf15227_82586-85398' '(at5g64320 : 146.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative , Description = Pentatricopeptide (PPR) repeat protein, putative, PFAM = PF01535;PF13041;PF13041;PF13041;PF12854)' T
'17.8.1.1' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis' '' ''
'17.8.1.1.2' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.isochorismate pyruvate lyase' '' ''
'17.8.1.1.3' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.benzoic acid-2-hydroxylase' '' ''
'17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 842.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 894.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 854.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 868.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T
'17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf05415_61553-65549' '(at2g43820 : 527.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 351.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 218.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 1012.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 842.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 872.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 880.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 858.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T
'17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf05415_61553-65549' '(at2g43820 : 527.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 351.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 218.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 1054.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'17.8.1.1.6' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA methyltransferase' '' ''
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 404.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 590.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf01146_1201265-1205921' '(gnl|cdd|86349 : 254.0) no description available & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g04370 : 180.0) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.; NAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 935 Blast hits to 920 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 729; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative samt, Description = Salicylic acid methyl transferase, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf01163_81954-86964' '(gnl|cdd|86349 : 373.0) no description available & (q9fyz9|bamt_antma : 311.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g66430 : 292.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T
'17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 494.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T
'17.8.2' 'hormone metabolism.salicylic acid.signal transduction' '' ''
'17.8.3' 'hormone metabolism.salicylic acid.induced-regulated-responsive-activated' '' ''
'17.8.1001' 'hormone metabolism.salicylic acid.synthesis-degradation' 'salicylic acid-glucose' '' M
'17.8.1002' 'hormone metabolism.salicylic acid.synthesis-degradation.Methylsalicylate' 'methylsalicylate' '' M
'18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold44373_9289-15642' '(at3g21070 : 482.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 480.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 302.0) no description available & (gnl|cdd|30410 : 200.0) no description available & (reliability: 964.0) & (original description: Putative NbNADK1, Description = NAD kinase, PFAM = PF01513)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold45678_5162-8079' '(at3g16050 : 437.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 419.0) no description available & (q39963|pdx1_hevbr : 405.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 377.0) no description available & (reliability: 818.0) & (original description: Putative PDX12, Description = Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, PFAM = PF01680)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold51179_255-11453' '(at2g23420 : 952.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 561.0) no description available & (gnl|cdd|29617 : 467.0) no description available & (reliability: 1904.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold92711_2391-5017' '(at2g25710 : 147.0) Encodes holocarboxylase synthase.; holocarboxylase synthase 1 (HCS1); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthetase 2 (TAIR:AT1G37150.2); Has 6039 Blast hits to 6035 proteins in 2305 species: Archae - 225; Bacteria - 4034; Metazoa - 119; Fungi - 135; Plants - 62; Viruses - 0; Other Eukaryotes - 1464 (source: NCBI BLink). & (gnl|cdd|36749 : 101.0) no description available & (reliability: 294.0) & (original description: Putative hcs1, Description = Holocarboxylase synthetase 2, PFAM = PF03099)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold416_500989-509168' '(at2g46580 : 200.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding, pyridoxamine-phosphate oxidase activity; INVOLVED IN: oxidation reduction, pyridoxine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase (InterPro:IPR000659), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 1290 Blast hits to 1290 proteins in 309 species: Archae - 0; Bacteria - 510; Metazoa - 56; Fungi - 60; Plants - 40; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink). & (gnl|cdd|39758 : 120.0) no description available & (gnl|cdd|34736 : 89.4) no description available & (reliability: 400.0) & (original description: Putative Os03g0115500, Description = Os03g0115500 protein, PFAM = PF12766)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1321_53016-68250' '(at5g49970 : 685.0) encodes the bifunctional pyridoxine (pyridoxamine) 5Ã-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 273.0) no description available & (gnl|cdd|37797 : 256.0) no description available & (reliability: 1370.0) & (original description: Putative abp, Description = NAD(P)H-hydrate epimerase, PFAM = PF01243;PF10590;PF03853)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1429_325463-336800' '(at2g23420 : 966.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 566.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1932.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1632_232399-268734' '(at5g57300 : 140.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (gnl|cdd|36753 : 120.0) no description available & (gnl|cdd|32408 : 88.8) no description available & (reliability: 280.0) & (original description: Putative coq5, Description = 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, PFAM = PF01209)' T
'18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold6381_82661-94486' '(at5g60540 : 342.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 259.0) no description available & (gnl|cdd|38420 : 157.0) no description available & (reliability: 684.0) & (original description: Putative PDX2, Description = Probable pyridoxal 5'-phosphate synthase subunit PDX2, PFAM = PF01174)' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00009503ctg005_6581-9044' '(at1g04640 : 169.0) Lipoyltransferase, located in mitochondria but not found in chloroplasts; lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35546 : 105.0) no description available & (gnl|cdd|30669 : 86.1) no description available & (reliability: 338.0) & (original description: Putative LIP2, Description = Octanoyltransferase, PFAM = PF03099)' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00025844ctg003_27349-30275' '(q39963|pdx1_hevbr : 524.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (at5g01410 : 518.0) Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.; REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36819 : 504.0) no description available & (gnl|cdd|81311 : 489.0) no description available & (reliability: 1036.0) & (original description: Putative PDX13, Description = Pyridoxal 5'-phosphate synthase subunit PDX1.3, PFAM = PF01680)' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00028002ctg000_1-8728' '(at5g49970 : 724.0) encodes the bifunctional pyridoxine (pyridoxamine) 5Ã-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 297.0) no description available & (gnl|cdd|37797 : 279.0) no description available & (reliability: 1448.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF03853;PF01243;PF10590)' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00029150ctg005_2406-9036' '(at4g31050 : 239.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80443 : 150.0) no description available & (gnl|cdd|35546 : 107.0) no description available & (reliability: 478.0) & (original description: Putative lipB, Description = Octanoyltransferase, PFAM = )' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00034976ctg001_40-6684' '(at5g60540 : 280.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 213.0) no description available & (gnl|cdd|38420 : 127.0) no description available & (reliability: 560.0) & (original description: Putative pdx2, Description = Pdx2, PFAM = PF01174)' T
'18' 'Co-factor and vitamine metabolism' 'niben044scf00055034ctg001_12297-22835' '(at3g21070 : 489.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 463.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 207.0) no description available & (gnl|cdd|85503 : 142.0) no description available & (reliability: 978.0) & (original description: Putative NADK1, Description = NAD(H) kinase 1, PFAM = PF01513)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf00126_418924-626620' '(at1g37150 : 420.0) holocarboxylase synthetase 2 (HCS2); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1 (TAIR:AT2G25710.2); Has 6001 Blast hits to 6001 proteins in 2273 species: Archae - 223; Bacteria - 3976; Metazoa - 118; Fungi - 132; Plants - 62; Viruses - 0; Other Eukaryotes - 1490 (source: NCBI BLink). & (gnl|cdd|36749 : 300.0) no description available & (gnl|cdd|30688 : 135.0) no description available & (reliability: 840.0) & (original description: Putative HCS2, Description = Biotin--protein ligase 2, PFAM = PF03099;PF02237)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf00509_344601-358471' '(at5g60540 : 338.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 256.0) no description available & (gnl|cdd|38420 : 157.0) no description available & (reliability: 676.0) & (original description: Putative PDX2, Description = Probable pyridoxal 5'-phosphate synthase subunit PDX2, PFAM = PF01174)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf00573_553073-555999' '(q39963|pdx1_hevbr : 528.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (at5g01410 : 518.0) Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.; REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36819 : 506.0) no description available & (gnl|cdd|81311 : 490.0) no description available & (reliability: 1036.0) & (original description: Putative PDX13, Description = Pyridoxal 5'-phosphate synthase subunit PDX1.3, PFAM = PF01680)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf00603_287370-295647' '(at2g46580 : 230.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding, pyridoxamine-phosphate oxidase activity; INVOLVED IN: oxidation reduction, pyridoxine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase (InterPro:IPR000659), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 1290 Blast hits to 1290 proteins in 309 species: Archae - 0; Bacteria - 510; Metazoa - 56; Fungi - 60; Plants - 40; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink). & (gnl|cdd|39758 : 124.0) no description available & (gnl|cdd|34736 : 103.0) no description available & (reliability: 460.0) & (original description: Putative PPOX2, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 2, PFAM = PF12766)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf01802_215615-234033' '(at2g23420 : 964.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 562.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1928.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf01922_858283-871659' '(at1g04620 : 791.0) coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; FUNCTIONS IN: coenzyme F420 hydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal (InterPro:IPR007525), Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal (InterPro:IPR007516); Has 499 Blast hits to 498 proteins in 165 species: Archae - 202; Bacteria - 188; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|31238 : 185.0) no description available & (reliability: 1582.0) & (original description: Putative HCAR, Description = 7-hydroxymethyl chlorophyll a reductase, chloroplastic, PFAM = PF04432;PF04422)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf03687_67139-97387' '(at2g01350 : 509.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 326.0) no description available & (gnl|cdd|29619 : 321.0) no description available & (reliability: 1018.0) & (original description: Putative nadC, Description = Nicotinate-nucleotide pyrophosphorylase, PFAM = PF01729;PF02749)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf03687_140113-148260' '(at2g01350 : 492.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 336.0) no description available & (gnl|cdd|29619 : 328.0) no description available & (reliability: 984.0) & (original description: Putative QPT, Description = Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic, PFAM = PF01729;PF02749)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf04107_161729-165492' '(at1g47578 : 357.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1). & (gnl|cdd|80443 : 231.0) no description available & (gnl|cdd|35546 : 179.0) no description available & (reliability: 704.0) & (original description: Putative lipB, Description = Lipoate-protein ligase B, PFAM = PF03099)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf04489_66610-69805' '(at3g16050 : 431.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 413.0) no description available & (q39963|pdx1_hevbr : 397.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 369.0) no description available & (reliability: 806.0) & (original description: Putative pdxS, Description = Pyridoxal 5'-phosphate synthase subunit PdxS, PFAM = PF01680)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf04654_472078-478687' '(at5g49970 : 565.0) encodes the bifunctional pyridoxine (pyridoxamine) 5Ã-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37796 : 242.0) no description available & (gnl|cdd|81689 : 231.0) no description available & (reliability: 1130.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF03853;PF01243;PF10590)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf04788_137676-144040' '(at2g01350 : 495.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 334.0) no description available & (gnl|cdd|29619 : 328.0) no description available & (reliability: 990.0) & (original description: Putative qpt2, Description = Quinolinate phosphoribosyltransferase, PFAM = PF02749;PF01729)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf04869_358269-371164' '(at3g21070 : 669.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 645.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 323.0) no description available & (gnl|cdd|30410 : 209.0) no description available & (reliability: 1338.0) & (original description: Putative NADK1, Description = NAD(H) kinase 1, PFAM = PF01513)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf05799_199402-202291' '(at4g31050 : 354.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80443 : 229.0) no description available & (gnl|cdd|35546 : 182.0) no description available & (reliability: 708.0) & (original description: Putative lipB, Description = Lipoate-protein ligase B, PFAM = PF03099)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf06725_110139-123242' '(at5g55810 : 324.0) encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.; nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820). & (gnl|cdd|38409 : 249.0) no description available & (gnl|cdd|28827 : 162.0) no description available & (reliability: 648.0) & (original description: Putative NMNAT, Description = Nicotinamide/nicotinic acid mononucleotide adenylyltransferase, PFAM = PF01467)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf06869_218433-221137' '(at1g04640 : 354.0) Lipoyltransferase, located in mitochondria but not found in chloroplasts; lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35546 : 214.0) no description available & (gnl|cdd|80443 : 182.0) no description available & (reliability: 708.0) & (original description: Putative LIP2, Description = Octanoyltransferase, PFAM = PF03099)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf07162_353714-372358' '(at5g49970 : 725.0) encodes the bifunctional pyridoxine (pyridoxamine) 5Ã-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 297.0) no description available & (gnl|cdd|37797 : 282.0) no description available & (reliability: 1450.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF01243;PF03853;PF10590)' T
'18' 'Co-factor and vitamine metabolism' 'niben101scf11379_95777-106168' '(at5g57300 : 437.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (gnl|cdd|36753 : 364.0) no description available & (gnl|cdd|80578 : 297.0) no description available & (reliability: 874.0) & (original description: Putative COQ5, Description = 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, PFAM = PF01209)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'nbv0.3scaffold37994_1-7319' '(at1g30910 : 389.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 303.0) no description available & (gnl|cdd|33030 : 152.0) no description available & (q655r6|mocos_orysa : 131.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative ARC, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03473;PF03476)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00023_656443-663136' '(at5g55130 : 642.0) putative molybdopterin synthase sulphurylase (cnx5); "co-factor for nitrate, reductase and xanthine dehydrogenase 5" (CNX5); FUNCTIONS IN: Mo-molybdopterin cofactor sulfurase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), MoeZ/MoeB (InterPro:IPR007901); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.2); Has 14042 Blast hits to 14039 proteins in 2395 species: Archae - 240; Bacteria - 9204; Metazoa - 714; Fungi - 607; Plants - 341; Viruses - 0; Other Eukaryotes - 2936 (source: NCBI BLink). & (gnl|cdd|37228 : 514.0) no description available & (gnl|cdd|30111 : 333.0) no description available & (reliability: 1284.0) & (original description: Putative MOCS3, Description = Adenylyltransferase and sulfurtransferase MOCS3, PFAM = PF00581;PF00899)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00571_1103866-1106395' '(at5g44720 : 164.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37573 : 121.0) no description available & (gnl|cdd|86342 : 98.4) no description available & (reliability: 328.0) & (original description: Putative MCSU1, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03476)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00603_46706-50037' '(at1g01290 : 250.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria; cofactor of nitrate reductase and xanthine dehydrogenase 3 (CNX3); CONTAINS InterPro DOMAIN/s: Molybdopterin cofactor biosynthesis C (MoaC) domain (InterPro:IPR002820); Has 5242 Blast hits to 5240 proteins in 1916 species: Archae - 213; Bacteria - 3669; Metazoa - 104; Fungi - 75; Plants - 45; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82955 : 212.0) no description available & (gnl|cdd|38087 : 152.0) no description available & (reliability: 500.0) & (original description: Putative CNX3, Description = Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial, PFAM = PF01967)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf07937_355770-358351' '(at2g43760 : 225.0) molybdopterin biosynthesis MoaE family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molybdopterin biosynthesis MoaE (InterPro:IPR003448); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38517 : 196.0) no description available & (gnl|cdd|58647 : 159.0) no description available & (reliability: 450.0) & (original description: Putative MOCS2, Description = Molybdopterin synthase catalytic subunit, PFAM = PF02391)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf08446_66120-72954' '(at4g10100 : 97.1) molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; "co-factor for nitrate, reductase and xanthine dehydrogenase 7" (CNX7); CONTAINS InterPro DOMAIN/s: ThiamineS (InterPro:IPR003749), Molybdopterin converting factor, subunit 1 (InterPro:IPR010034), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 1000 Blast hits to 1000 proteins in 381 species: Archae - 21; Bacteria - 814; Metazoa - 52; Fungi - 2; Plants - 54; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|29161 : 83.0) no description available & (gnl|cdd|38684 : 81.6) no description available & (reliability: 194.2) & (original description: Putative VP15, Description = Molybdopterin synthase sulfur carrier subunit, PFAM = PF02597)' T
'18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf08755_315811-321896' '(at1g30910 : 427.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 326.0) no description available & (gnl|cdd|33030 : 167.0) no description available & (q655r6|mocos_orysa : 126.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 812.0) & (original description: Putative ARC, Description = MOSC domain-containing protein, PFAM = PF03473;PF03476)' T
'18.1.1' 'Co-factor and vitamine metabolism.molybdenum cofactor.gephyrin' 'nbv0.3scaffold34259_1-15921' '(at5g20990 : 831.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (gnl|cdd|58168 : 390.0) no description available & (gnl|cdd|37582 : 241.0) no description available & (reliability: 1662.0) & (original description: Putative CNX1, Description = Molybdopterin biosynthesis protein CNX1, PFAM = PF00994;PF00994;PF03454;PF03453)' T
'18.1.1' 'Co-factor and vitamine metabolism.molybdenum cofactor.gephyrin' 'niben101scf00862_160538-187759' '(at5g20990 : 858.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (gnl|cdd|58168 : 385.0) no description available & (gnl|cdd|37582 : 244.0) no description available & (reliability: 1716.0) & (original description: Putative CNX1, Description = Molybdopterin biosynthesis protein CNX1, PFAM = PF03453;PF03454;PF00994;PF00994)' T
'18.2' 'Co-factor and vitamine metabolism.thiamine' 'nbv0.3scaffold38713_1-6518' '(at2g29630 : 1159.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (gnl|cdd|82913 : 783.0) no description available & (reliability: 2318.0) & (original description: Putative thiC, Description = Phosphomethylpyrimidine synthase, PFAM = PF01964;PF13667)' T
'18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf02842_74140-79508' '(at3g24030 : 312.0) hydroxyethylthiazole kinase family protein; FUNCTIONS IN: catalytic activity, hydroxyethylthiazole kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hydroxyethylthiazole kinase (InterPro:IPR000417), Hydroxyethylthiazole kinase, monofunctional (InterPro:IPR011144); Has 2753 Blast hits to 2753 proteins in 1214 species: Archae - 124; Bacteria - 2340; Metazoa - 2; Fungi - 135; Plants - 43; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|29354 : 282.0) no description available & (reliability: 624.0) & (original description: Putative THIM, Description = Hydroxyethylthiazole kinase, PFAM = PF02110)' T
'18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf11490_32963-37724' '(o23787|thi4_citsi : 523.0) Thiazole biosynthetic enzyme, chloroplast precursor - Citrus sinensis (Sweet orange) & (at5g54770 : 511.0) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.; THI1; FUNCTIONS IN: protein homodimerization activity, zinc ion binding; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38171 : 456.0) no description available & (gnl|cdd|85789 : 341.0) no description available & (reliability: 1022.0) & (original description: Putative THI1, Description = Thiamine thiazole synthase, chloroplastic, PFAM = PF01946)' T
'18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf11724_143636-148173' '(o23787|thi4_citsi : 526.0) Thiazole biosynthetic enzyme, chloroplast precursor - Citrus sinensis (Sweet orange) & (at5g54770 : 513.0) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.; THI1; FUNCTIONS IN: protein homodimerization activity, zinc ion binding; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38171 : 457.0) no description available & (gnl|cdd|85789 : 343.0) no description available & (reliability: 1026.0) & (original description: Putative thi2, Description = Thiamine thiazole synthase, PFAM = PF01946)' T
'18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf12676_94554-100802' '(at2g29630 : 1158.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (gnl|cdd|82913 : 783.0) no description available & (reliability: 2316.0) & (original description: Putative THIC, Description = Phosphomethylpyrimidine synthase, chloroplastic, PFAM = PF13667;PF01964)' T
'18.2.1' 'Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase' 'niben101scf00712_485530-502353' '(at2g44750 : 377.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase 2 (TPK2); CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase1 (TAIR:AT1G02880.3); Has 1352 Blast hits to 1350 proteins in 558 species: Archae - 0; Bacteria - 721; Metazoa - 134; Fungi - 134; Plants - 93; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38363 : 258.0) no description available & (gnl|cdd|31752 : 106.0) no description available & (reliability: 754.0) & (original description: Putative TPK1, Description = Thiamine pyrophosphokinase 1, PFAM = PF04265;PF04263)' T
'18.2.1' 'Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase' 'niben101scf01369_379655-392564' '(at2g44750 : 357.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase 2 (TPK2); CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase1 (TAIR:AT1G02880.3); Has 1352 Blast hits to 1350 proteins in 558 species: Archae - 0; Bacteria - 721; Metazoa - 134; Fungi - 134; Plants - 93; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38363 : 256.0) no description available & (gnl|cdd|31752 : 103.0) no description available & (reliability: 714.0) & (original description: Putative TPK1, Description = Thiamine pyrophosphokinase 1, PFAM = PF04265;PF04263)' T
'18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'nbv0.3scaffold7047_33357-57568' '(at1g22940 : 185.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|86036 : 147.0) no description available & (reliability: 370.0) & (original description: Putative th1, Description = Thiamine-phosphate pyrophosphorylase, PFAM = PF02581)' T
'18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'nbv0.5scaffold7197_46657-71723' '(at1g22940 : 179.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|86036 : 143.0) no description available & (reliability: 358.0) & (original description: Putative th1, Description = TP synthase, PFAM = PF02581)' T
'18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'niben044scf00001404ctg029_1-2700' '(at1g22940 : 325.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|73367 : 206.0) no description available & (gnl|cdd|37809 : 138.0) no description available & (reliability: 650.0) & (original description: Putative thiE, Description = Thiamine-phosphate synthase, PFAM = PF02581)' T
'18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'niben101scf01970_960207-971024' '(at1g22940 : 718.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|37809 : 449.0) no description available & (gnl|cdd|81946 : 315.0) no description available & (reliability: 1436.0) & (original description: Putative TH1, Description = Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic, PFAM = PF08543;PF02581)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'nbv0.3scaffold21892_3573-10825' '(at4g21470 : 232.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38125 : 118.0) no description available & (gnl|cdd|30982 : 109.0) no description available & (reliability: 464.0) & (original description: Putative Sb03g035060, Description = Putative uncharacterized protein Sb03g035060, PFAM = PF13419)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'nbv0.3scaffold35381_1432-7293' '(at4g21470 : 559.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38320 : 221.0) no description available & (gnl|cdd|30982 : 141.0) no description available & (reliability: 1118.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF01687;PF13419)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben044scf00001169ctg022_15259-26255' '(at5g08340 : 352.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 126.0) no description available & (reliability: 704.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf01710_165583-173719' '(at4g21470 : 284.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38125 : 169.0) no description available & (gnl|cdd|30982 : 140.0) no description available & (reliability: 568.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF13419)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf05177_172057-184151' '(at5g08340 : 357.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 127.0) no description available & (reliability: 714.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf05188_176399-196744' '(at5g08340 : 353.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 128.0) no description available & (reliability: 706.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T
'18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf07372_14513-22448' '(at4g21470 : 542.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38320 : 221.0) no description available & (gnl|cdd|30982 : 148.0) no description available & (reliability: 1084.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF13419;PF01687)' T
'18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'nbv0.5scaffold2826_315750-321069' '(at5g59750 : 711.0) DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1). & (gnl|cdd|82931 : 533.0) no description available & (gnl|cdd|36498 : 350.0) no description available & (reliability: 1422.0) & (original description: Putative RIBA3, Description = Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic, PFAM = PF00926;PF00925)' T
'18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf00189_671254-680655' '(at5g64300 : 746.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 612.0) no description available & (gnl|cdd|36498 : 398.0) no description available & (reliability: 1492.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00925;PF00926)' T
'18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf01005_431334-437792' '(at5g64300 : 772.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 621.0) no description available & (gnl|cdd|36498 : 412.0) no description available & (reliability: 1544.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00926;PF00925)' T
'18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf01866_330298-337296' '(at5g59750 : 708.0) DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1). & (gnl|cdd|82931 : 527.0) no description available & (gnl|cdd|36498 : 347.0) no description available & (reliability: 1416.0) & (original description: Putative RIBA3, Description = Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic, PFAM = PF00925;PF00926)' T
'18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf07608_149245-155811' '(at5g64300 : 775.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 624.0) no description available & (gnl|cdd|36498 : 414.0) no description available & (reliability: 1550.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00926;PF00925)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'nbv0.3scaffold9967_9179-12024' '(at2g20690 : 300.0) A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase.; lumazine-binding family protein; FUNCTIONS IN: binding, riboflavin synthase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Lumazine-binding protein (InterPro:IPR001783); Has 6777 Blast hits to 6682 proteins in 2207 species: Archae - 44; Bacteria - 4232; Metazoa - 1; Fungi - 143; Plants - 41; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38520 : 279.0) no description available & (gnl|cdd|30655 : 235.0) no description available & (reliability: 600.0) & (original description: Putative rib5, Description = Riboflavin synthase, PFAM = PF00677;PF00677)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'nbv0.3scaffold33716_12736-22804' '(at2g44050 : 204.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 198.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 173.0) no description available & (gnl|cdd|80483 : 161.0) no description available & (reliability: 408.0) & (original description: Putative HaRibC, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben044scf00010765ctg019_1-11534' '(at2g44050 : 132.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 132.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 104.0) no description available & (gnl|cdd|80483 : 100.0) no description available & (reliability: 264.0) & (original description: Putative ribE, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf00168_153197-163809' '(at2g44050 : 200.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 200.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 154.0) no description available & (gnl|cdd|80483 : 145.0) no description available & (reliability: 400.0) & (original description: Putative ribE, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf01023_350519-355228' '(at2g20690 : 282.0) A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase.; lumazine-binding family protein; FUNCTIONS IN: binding, riboflavin synthase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Lumazine-binding protein (InterPro:IPR001783); Has 6777 Blast hits to 6682 proteins in 2207 species: Archae - 44; Bacteria - 4232; Metazoa - 1; Fungi - 143; Plants - 41; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38520 : 265.0) no description available & (gnl|cdd|30655 : 220.0) no description available & (reliability: 564.0) & (original description: Putative rib5, Description = Riboflavin synthase, alpha subunit, PFAM = PF00677;PF00677)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf02594_314364-317059' '(q9xh32|risb_spiol : 222.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (at2g44050 : 214.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (gnl|cdd|38453 : 184.0) no description available & (gnl|cdd|80483 : 182.0) no description available & (reliability: 428.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf02837_646659-661534' '(at2g44050 : 249.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 249.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 209.0) no description available & (gnl|cdd|80483 : 189.0) no description available & (reliability: 498.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf06806_364598-387671' '(at2g44050 : 258.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 250.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 210.0) no description available & (gnl|cdd|80483 : 187.0) no description available & (reliability: 516.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T
'18.4' 'Co-factor and vitamine metabolism.pantothenate' '' ''
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 912.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1050.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1110.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf01267_7869-12654' '(at1g10070 : 520.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 410.0) no description available & (gnl|cdd|81992 : 327.0) no description available & (reliability: 1040.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf02348_905784-914291' '(at1g10070 : 471.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 386.0) no description available & (gnl|cdd|81992 : 313.0) no description available & (reliability: 942.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 906.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04843_12864-20690' '(at1g10070 : 464.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 389.0) no description available & (gnl|cdd|81992 : 304.0) no description available & (reliability: 928.0) & (original description: Putative BCAT6, Description = Branched-chain-amino-acid aminotransferase 6, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04884_112078-119759' '(at5g65770 : 474.0) LITTLE NUCLEI4 (LINC4); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2). & (gnl|cdd|35383 : 92.2) no description available & (reliability: 932.0) & (original description: Putative CRWN4, Description = Protein CROWDED NUCLEI 4, PFAM = )' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T
'18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 916.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T
'18.4.2' 'Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)' 'nbv0.5scaffold247_762986-769725' '(at2g46110 : 526.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; ketopantoate hydroxymethyltransferase 1 (KPHMT1); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT3G61530.2); Has 7565 Blast hits to 7565 proteins in 2036 species: Archae - 128; Bacteria - 4147; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3087 (source: NCBI BLink). & (gnl|cdd|38160 : 439.0) no description available & (gnl|cdd|80618 : 325.0) no description available & (reliability: 1052.0) & (original description: Putative panB, Description = 3-methyl-2-oxobutanoate hydroxymethyltransferase, PFAM = PF02548)' T
'18.4.2' 'Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)' 'niben101scf08030_537919-543959' '(at3g61530 : 540.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38160 : 454.0) no description available & (gnl|cdd|80618 : 335.0) no description available & (reliability: 1080.0) & (original description: Putative KPHMT2, Description = 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial, PFAM = PF02548)' T
'18.4.3' 'Co-factor and vitamine metabolism.pantothenate.2-dehydropantoate 2-reductase' '' ''
'18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'nbv0.3scaffold2984_12161-14495' '(o24035|panc_lotja : 294.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 292.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 247.0) no description available & (gnl|cdd|28807 : 234.0) no description available & (reliability: 584.0) & (original description: Putative panC, Description = Pantothenate synthetase, PFAM = PF02569)' T
'18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'niben101scf00920_79755-83920' '(o24035|panc_lotja : 452.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 435.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 378.0) no description available & (gnl|cdd|28807 : 365.0) no description available & (reliability: 870.0) & (original description: Putative PANC, Description = Pantoate--beta-alanine ligase, PFAM = PF02569)' T
'18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'niben101scf01687_172756-177271' '(o24035|panc_lotja : 449.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 432.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 370.0) no description available & (gnl|cdd|28807 : 358.0) no description available & (reliability: 864.0) & (original description: Putative panC1, Description = Pantothenate synthetase 1, PFAM = PF02569)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben044scf00042505ctg003_1795-4831' '(at4g32180 : 166.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 88.4) no description available & (reliability: 332.0) & (original description: Putative PANK2, Description = Pantothenate kinase 2, PFAM = PF03630)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf03004_419982-432758' '(at4g35360 : 595.0) Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 466.0) no description available & (reliability: 1190.0) & (original description: Putative At2g17340, Description = Pantothenate kinase, PFAM = PF01937)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf04287_437778-449680' '(at4g32180 : 496.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67258 : 424.0) no description available & (gnl|cdd|37412 : 420.0) no description available & (reliability: 992.0) & (original description: Putative PANK1, Description = Pantothenate kinase 1, PFAM = PF03630)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf05551_149073-157904' '(at4g32180 : 927.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 419.0) no description available & (gnl|cdd|67258 : 186.0) no description available & (reliability: 1854.0) & (original description: Putative PANK4, Description = Pantothenate kinase 4, PFAM = PF03630;PF01937)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf08018_16710-33066' '(at4g32180 : 1305.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 483.0) no description available & (gnl|cdd|67258 : 455.0) no description available & (reliability: 2610.0) & (original description: Putative PANK2, Description = Pantothenate kinase 2, PFAM = PF01937;PF03630)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf08018_16765-24299' '(at4g32180 : 430.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 289.0) no description available & (gnl|cdd|67258 : 268.0) no description available & (reliability: 860.0) & (original description: Putative PANK4, Description = Pantothenate kinase 4, PFAM = PF03630)' T
'18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf09867_250805-261838' '(at4g35360 : 636.0) Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 497.0) no description available & (reliability: 1272.0) & (original description: Putative At2g17340, Description = Uncharacterized protein At2g17340, PFAM = PF01937)' T
'18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'nbv0.5scaffold1728_301897-307743' '(at1g12350 : 395.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4Ã-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 323.0) no description available & (gnl|cdd|86553 : 168.0) no description available & (reliability: 790.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T
'18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'niben101scf00960_337158-341785' '(at1g12350 : 411.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4Ã-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 340.0) no description available & (gnl|cdd|86553 : 176.0) no description available & (reliability: 822.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T
'18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'niben101scf13168_53864-61706' '(at1g12350 : 383.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4Ã-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 308.0) no description available & (gnl|cdd|86553 : 168.0) no description available & (reliability: 766.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T
'18.4.7' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine decarboxylase (PPCDC)' 'niben101scf02105_357140-360193' '(at3g18030 : 336.0) flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).; HAL3-like protein A (HAL3A); CONTAINS InterPro DOMAIN/s: Flavoprotein (InterPro:IPR003382); BEST Arabidopsis thaliana protein match is: Flavoprotein (TAIR:AT1G48605.1); Has 7047 Blast hits to 7045 proteins in 2495 species: Archae - 186; Bacteria - 4343; Metazoa - 125; Fungi - 269; Plants - 90; Viruses - 5; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|35891 : 250.0) no description available & (gnl|cdd|81644 : 160.0) no description available & (reliability: 672.0) & (original description: Putative HAL3A, Description = Phosphopantothenoylcysteine decarboxylase, PFAM = PF02441)' T
'18.4.8' 'Co-factor and vitamine metabolism.pantothenate.pantetheine-phosphate adenylyltransferase (PPAT)' 'niben101scf00592_5733-11049' '(at2g18250 : 242.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 199.0) no description available & (gnl|cdd|28826 : 193.0) no description available & (reliability: 484.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T
'18.4.8' 'Co-factor and vitamine metabolism.pantothenate.pantetheine-phosphate adenylyltransferase (PPAT)' 'niben101scf16937_83330-89520' '(at2g18250 : 227.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 193.0) no description available & (gnl|cdd|28826 : 187.0) no description available & (reliability: 454.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T
'18.4.9' 'Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK)' 'niben044scf00010441ctg008_22266-26827' '(at2g27490 : 318.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (gnl|cdd|38430 : 271.0) no description available & (gnl|cdd|30195 : 220.0) no description available & (reliability: 636.0) & (original description: Putative coaE, Description = Dephospho-CoA kinase, PFAM = PF01121)' T
'18.4.9' 'Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK)' 'niben101scf05633_66878-72019' '(at2g27490 : 309.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (gnl|cdd|38430 : 269.0) no description available & (gnl|cdd|30195 : 223.0) no description available & (reliability: 618.0) & (original description: Putative coaE, Description = Dephospho-CoA kinase, PFAM = PF01121)' T
'18.5' 'Co-factor and vitamine metabolism.folate & vitamine K' 'nbv0.5scaffold1762_179680-186816' '(at5g66120 : 639.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 486.0) no description available & (gnl|cdd|35911 : 107.0) no description available & (reliability: 1278.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T
'18.5' 'Co-factor and vitamine metabolism.folate & vitamine K' 'niben101scf07250_127947-135136' '(at5g66120 : 629.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 490.0) no description available & (gnl|cdd|35911 : 106.0) no description available & (reliability: 1258.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T
'18.5.1' 'Co-factor and vitamine metabolism.folate & vitamine K.folate' '' ''
'18.5.1.1' 'Co-factor and vitamine metabolism.folate & vitamine K.folate.methylenetetrahydrofolate dehydrogenase (NADP+ dependent)' '' ''
'18.5.2' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K' '' ''
'18.5.2.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase' 'niben101scf05166_639516-662398' '(q9zpc0|ics_catro : 639.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g18870 : 592.0) Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410).; isochorismate synthase 2 (ICS2); CONTAINS InterPro DOMAIN/s: Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Isochorismate synthase (InterPro:IPR004561); BEST Arabidopsis thaliana protein match is: ADC synthase superfamily protein (TAIR:AT1G74710.1); Has 14307 Blast hits to 14303 proteins in 2517 species: Archae - 246; Bacteria - 10487; Metazoa - 5; Fungi - 253; Plants - 208; Viruses - 0; Other Eukaryotes - 3108 (source: NCBI BLink). & (gnl|cdd|36437 : 398.0) no description available & (gnl|cdd|31363 : 245.0) no description available & (reliability: 1184.0) & (original description: Putative ics, Description = Isochorismate synthase, PFAM = PF00425)' T
'18.5.2.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase' 'niben101scf05166_639736-662377' '(q9zpc0|ics_catro : 637.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g18870 : 591.0) Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410).; isochorismate synthase 2 (ICS2); CONTAINS InterPro DOMAIN/s: Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Isochorismate synthase (InterPro:IPR004561); BEST Arabidopsis thaliana protein match is: ADC synthase superfamily protein (TAIR:AT1G74710.1); Has 14307 Blast hits to 14303 proteins in 2517 species: Archae - 246; Bacteria - 10487; Metazoa - 5; Fungi - 253; Plants - 208; Viruses - 0; Other Eukaryotes - 3108 (source: NCBI BLink). & (gnl|cdd|36437 : 398.0) no description available & (gnl|cdd|31363 : 245.0) no description available & (reliability: 1182.0) & (original description: Putative ics, Description = Isochorismate synthase, PFAM = PF00425)' T
'18.5.2.4' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.o-Succinyl-BenzoylCoa Synthetase' 'niben101scf04323_248248-255044' '(at1g30520 : 649.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (gnl|cdd|36392 : 418.0) no description available & (gnl|cdd|30666 : 317.0) no description available & (o24145|4cl1_tobac : 130.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1298.0) & (original description: Putative AAE14, Description = 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal, PFAM = PF13193;PF00501)' T
'18.5.2.5' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.naphthoate synthase' 'niben101scf13569_22439-27265' '(at1g60550 : 516.0) enoyl-CoA hydratase/isomerase D (ECHID); FUNCTIONS IN: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity, catalytic activity; INVOLVED IN: vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Naphthoate synthase (InterPro:IPR010198), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase A (TAIR:AT4G16210.1); Has 35699 Blast hits to 35688 proteins in 2278 species: Archae - 489; Bacteria - 23573; Metazoa - 1539; Fungi - 813; Plants - 522; Viruses - 0; Other Eukaryotes - 8763 (source: NCBI BLink). & (gnl|cdd|82216 : 466.0) no description available & (gnl|cdd|36893 : 285.0) no description available & (reliability: 1032.0) & (original description: Putative MENB, Description = 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal, PFAM = PF00378)' T
'18.5.2.7' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.DHNA Phytyltransferase' 'niben044scf00000286ctg004_42195-49233' '(at1g60600 : 367.0) Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport.; ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537), 1,4-dihydroxy-2-naphthoate phytyltransferase (InterPro:IPR011937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82225 : 243.0) no description available & (reliability: 734.0) & (original description: Putative ABC4, Description = 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic, PFAM = PF01040)' T
'18.5.2.7' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.DHNA Phytyltransferase' 'niben101scf07608_242552-250035' '(at1g60600 : 372.0) Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport.; ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537), 1,4-dihydroxy-2-naphthoate phytyltransferase (InterPro:IPR011937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82225 : 249.0) no description available & (reliability: 744.0) & (original description: Putative menA, Description = 2-carboxy-1,4-naphthoquinone phytyltransferase, PFAM = PF01040)' T
'18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'nbv0.3scaffold37463_11676-18213' '(at1g23360 : 263.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 199.0) no description available & (gnl|cdd|36753 : 167.0) no description available & (reliability: 526.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T
'18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'nbv0.5scaffold852_118414-124312' '(at1g23360 : 262.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 202.0) no description available & (gnl|cdd|36753 : 165.0) no description available & (reliability: 524.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T
'18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben044scf00005744ctg001_1-6835' '(at1g23360 : 217.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 160.0) no description available & (gnl|cdd|36753 : 137.0) no description available & (reliability: 434.0) & (original description: Putative menG, Description = Demethylphylloquinone methyltransferase, PFAM = PF01209)' T
'18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben101scf01164_41407-48470' '(at1g23360 : 344.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 260.0) no description available & (gnl|cdd|36753 : 220.0) no description available & (reliability: 688.0) & (original description: Putative MENG, Description = 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic, PFAM = PF01209)' T
'18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben101scf02190_502818-508934' '(at1g23360 : 261.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 220.0) no description available & (gnl|cdd|36753 : 184.0) no description available & (reliability: 522.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T
'18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'nbv0.3scaffold12722_4586-40399' '(at1g68890 : 1627.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 461.0) no description available & (gnl|cdd|36437 : 256.0) no description available & (reliability: 3254.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF00561;PF16582;PF02776;PF02775;PF13378)' T
'18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'nbv0.3scaffold51712_7326-12085' '(at1g68890 : 165.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 122.0) no description available & (reliability: 330.0) & (original description: Putative menD, Description = 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, PFAM = PF02776)' T
'18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben044scf00040985ctg003_1-14447' '(at1g68890 : 680.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 212.0) no description available & (reliability: 1360.0) & (original description: Putative Os02g0581500, Description = Os02g0581500 protein, PFAM = PF00561;PF02775;PF13378;PF16582)' T
'18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben101scf08127_576640-616126' '(at1g68890 : 1690.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 476.0) no description available & (gnl|cdd|36437 : 260.0) no description available & (reliability: 3380.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF16582;PF13378;PF02776;PF02775;PF12697)' T
'18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben101scf11531_116375-152469' '(at1g68890 : 1627.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 461.0) no description available & (gnl|cdd|36437 : 257.0) no description available & (reliability: 3254.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF02776;PF13378;PF00561;PF16582;PF02775)' T
'18.6' 'Co-factor and vitamine metabolism.biotin' 'niben101scf00557_191587-198225' '(at2g31955 : 612.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (gnl|cdd|38087 : 470.0) no description available & (gnl|cdd|80556 : 386.0) no description available & (reliability: 1224.0) & (original description: Putative CNX2, Description = Cyclic pyranopterin monophosphate synthase, mitochondrial, PFAM = PF06463;PF04055;PF13353)' T
'18.6' 'Co-factor and vitamine metabolism.biotin' 'niben101scf11497_60554-68219' '(at2g31955 : 431.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (gnl|cdd|80556 : 293.0) no description available & (gnl|cdd|38087 : 224.0) no description available & (reliability: 862.0) & (original description: Putative CNX2, Description = Cyclic pyranopterin monophosphate synthase, mitochondrial, PFAM = PF13353;PF06463;PF04055)' T
'18.6.1' 'Co-factor and vitamine metabolism.biotin.biotin synthase' 'nbv0.3scaffold13276_13301-21899' '(at2g43360 : 585.0) Catalyzes the conversion of dethiobiotin to biotin.; BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro DOMAIN/s: Biotin/thiamin synthesis-associated protein (InterPro:IPR010722), Aldolase-type TIM barrel (InterPro:IPR013785), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197), Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits to 5366 proteins in 2012 species: Archae - 191; Bacteria - 4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink). & (gnl|cdd|38111 : 563.0) no description available & (gnl|cdd|30848 : 386.0) no description available & (reliability: 1170.0) & (original description: Putative BIO2, Description = Biotin synthase, PFAM = PF04055;PF06968)' T
'18.6.1' 'Co-factor and vitamine metabolism.biotin.biotin synthase' 'niben101scf01615_51016-71418' '(at2g43360 : 590.0) Catalyzes the conversion of dethiobiotin to biotin.; BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro DOMAIN/s: Biotin/thiamin synthesis-associated protein (InterPro:IPR010722), Aldolase-type TIM barrel (InterPro:IPR013785), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197), Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits to 5366 proteins in 2012 species: Archae - 191; Bacteria - 4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink). & (gnl|cdd|38111 : 581.0) no description available & (gnl|cdd|30848 : 401.0) no description available & (reliability: 1180.0) & (original description: Putative BIO2, Description = Biotin synthase, PFAM = PF04055;PF06968)' T
'18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'nbv0.3scaffold4472_25105-32597' '(at5g57590 : 483.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 119.0) no description available & (reliability: 966.0) & (original description: Putative biDA, Description = Onanonoxo-7-onima-8-eninoihtemlysoneda, PFAM = PF00202;PF13500)' T
'18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'niben101scf03983_144737-164790' '(at5g57590 : 976.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 326.0) no description available & (gnl|cdd|30510 : 235.0) no description available & (reliability: 1952.0) & (original description: Putative bioDA, Description = Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PFAM = PF13500;PF00202)' T
'18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'niben101scf03983_157285-164787' '(at5g57590 : 483.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 119.0) no description available & (reliability: 966.0) & (original description: Putative biDA, Description = Onanonoxo-7-onima-8-eninoihtemlysoneda, PFAM = PF13500;PF00202)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold20227_14951-18310' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 81.5) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold38820_8156-15117' '(at5g50210 : 877.0) Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.; quinolinate synthase (QS); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), Quinolinate synthetase A (InterPro:IPR003473); BEST Arabidopsis thaliana protein match is: sulfur E2 (TAIR:AT1G67810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82962 : 146.0) no description available & (reliability: 1754.0) & (original description: Putative QS, Description = Quinolinate synthase, chloroplastic, PFAM = PF02445;PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold65737_5995-9227' '(at4g26500 : 312.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32349 : 132.0) no description available & (gnl|cdd|37524 : 109.0) no description available & (reliability: 624.0) & (original description: Putative SUFE1, Description = SufE-like protein 1, chloroplastic/mitochondrial, PFAM = PF01722;PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.5scaffold20_1584979-1590926' '(gnl|cdd|38571 : 244.0) no description available & (at4g22220 : 235.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 222.0) no description available & (reliability: 438.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.5scaffold3730_73281-77352' '(at5g03905 : 184.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 155.0) no description available & (gnl|cdd|30664 : 116.0) no description available & (reliability: 368.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00006456ctg012_1091-4371' '(at4g26500 : 315.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32349 : 135.0) no description available & (gnl|cdd|37524 : 110.0) no description available & (reliability: 630.0) & (original description: Putative SUFE1, Description = SufE-like protein 1, chloroplastic/mitochondrial, PFAM = PF01722;PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00007133ctg003_11278-16242' '(at5g03905 : 187.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 165.0) no description available & (gnl|cdd|30664 : 114.0) no description available & (reliability: 374.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00016686ctg000_1933-6652' '(at1g67810 : 204.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 84.2) no description available & (reliability: 408.0) & (original description: Putative SUFE2, Description = SufE-like protein 2, chloroplastic, PFAM = PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00016686ctg000_2143-6314' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 82.2) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf00332_661405-664261' '(at5g03905 : 94.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative BnaAnng00860D, Description = BnaAnng00860D protein, PFAM = )' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf00343_535848-546055' '(at1g72090 : 830.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, catalytic activity; INVOLVED IN: metabolic process, RNA modification; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), Aldolase-type TIM barrel (InterPro:IPR013785), Methylthiotransferase, conserved site (InterPro:IPR020612), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), MiaB-like tRNA modifying enzyme, archaeal-type (InterPro:IPR006466); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT4G36390.1); Has 15738 Blast hits to 15705 proteins in 2423 species: Archae - 403; Bacteria - 9758; Metazoa - 296; Fungi - 1; Plants - 135; Viruses - 0; Other Eukaryotes - 5145 (source: NCBI BLink). & (gnl|cdd|39556 : 732.0) no description available & (gnl|cdd|30966 : 350.0) no description available & (q2r1u4|ck5p1_orysa : 119.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 1660.0) & (original description: Putative cdkal1, Description = Threonylcarbamoyladenosine tRNA methylthiotransferase, PFAM = PF04055;PF00919)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf01225_537733-544123' '(at5g50960 : 539.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38232 : 359.0) no description available & (gnl|cdd|73300 : 228.0) no description available & (reliability: 1078.0) & (original description: Putative NBP35, Description = Cytosolic Fe-S cluster assembly factor NBP35, PFAM = PF10609)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf01823_74244-78896' '(at5g03905 : 187.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 165.0) no description available & (gnl|cdd|30664 : 116.0) no description available & (reliability: 374.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf02634_60555-66228' '(at2g16710 : 196.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1). & (gnl|cdd|36336 : 168.0) no description available & (gnl|cdd|30664 : 129.0) no description available & (reliability: 392.0) & (original description: Putative iscA, Description = Iron-sulfur cluster assembly accessory protein, PFAM = PF01521)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf03213_102044-104340' '(at4g26500 : 115.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37524 : 95.2) no description available & (gnl|cdd|30620 : 85.4) no description available & (reliability: 230.0) & (original description: Putative SUFE, Description = AtSUFE, PFAM = PF01722)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf03939_553042-575511' '(gnl|cdd|38571 : 246.0) no description available & (at4g22220 : 234.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 221.0) no description available & (reliability: 430.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf04862_53500-58032' '(at1g67810 : 203.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 85.3) no description available & (reliability: 406.0) & (original description: Putative SUFE2, Description = SufE-like protein 2, chloroplastic, PFAM = PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf04862_53710-57694' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 83.0) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T
'18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf07778_406497-420083' '(at2g16710 : 211.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1). & (gnl|cdd|36336 : 169.0) no description available & (gnl|cdd|30664 : 124.0) no description available & (reliability: 422.0) & (original description: Putative iscA, Description = Iron-sulfur cluster assembly accessory protein, PFAM = PF01521)' T
'18.8' 'Co-factor and vitamine metabolism.ubiquinone' '' ''
'18.8.1' 'Co-factor and vitamine metabolism.ubiquinone.hexaprenyldihydroxybenzoate methyltransferase' 'niben044scf00056938ctg000_8129-17631' '(at2g30920 : 416.0) The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis.; coenzyme Q 3 (COQ3); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216), Ubiquinone biosynthesis O-methyltransferase (InterPro:IPR010233); Has 7105 Blast hits to 7105 proteins in 1734 species: Archae - 120; Bacteria - 4165; Metazoa - 130; Fungi - 181; Plants - 86; Viruses - 0; Other Eukaryotes - 2423 (source: NCBI BLink). & (gnl|cdd|81451 : 318.0) no description available & (gnl|cdd|36484 : 284.0) no description available & (reliability: 832.0) & (original description: Putative ubiG, Description = Ubiquinone biosynthesis O-methyltransferase, PFAM = PF08241)' T
'18.8.1' 'Co-factor and vitamine metabolism.ubiquinone.hexaprenyldihydroxybenzoate methyltransferase' 'niben101scf02357_708054-722915' '(at2g30920 : 421.0) The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis.; coenzyme Q 3 (COQ3); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216), Ubiquinone biosynthesis O-methyltransferase (InterPro:IPR010233); Has 7105 Blast hits to 7105 proteins in 1734 species: Archae - 120; Bacteria - 4165; Metazoa - 130; Fungi - 181; Plants - 86; Viruses - 0; Other Eukaryotes - 2423 (source: NCBI BLink). & (gnl|cdd|81451 : 318.0) no description available & (gnl|cdd|36484 : 286.0) no description available & (reliability: 842.0) & (original description: Putative ubiG, Description = Ubiquinone biosynthesis O-methyltransferase, PFAM = PF08241)' T
'18.10' 'Co-factor and vitamine metabolism.coenzyme M' '' ''
'18.10.3' 'Co-factor and vitamine metabolism.coenzyme M.2-hydroxyacid dehydrogenase' '' ''
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.3scaffold43122_14760-17277' '(at2g20860 : 169.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 150.0) no description available & (gnl|cdd|81623 : 114.0) no description available & (reliability: 338.0) & (original description: Putative lias, Description = Lipoate synthase, PFAM = PF16881)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.5scaffold2828_180405-182922' '(at2g20860 : 168.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 149.0) no description available & (gnl|cdd|81623 : 115.0) no description available & (reliability: 336.0) & (original description: Putative lias, Description = Lipoate synthase, PFAM = PF16881)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.5scaffold4635_99559-114176' '(at2g20860 : 561.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 540.0) no description available & (gnl|cdd|81623 : 413.0) no description available & (reliability: 1122.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben044scf00006610ctg021_1-3106' '(at2g20860 : 402.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 395.0) no description available & (gnl|cdd|81623 : 302.0) no description available & (reliability: 804.0) & (original description: Putative LAS, Description = Lipoic acid synthase, PFAM = PF04055)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf00290_243409-249689' '(at5g08415 : 539.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37883 : 516.0) no description available & (gnl|cdd|81623 : 438.0) no description available & (reliability: 1078.0) & (original description: Putative LIP1P, Description = Lipoyl synthase, chloroplastic, PFAM = PF04055;PF16881)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf01192_655395-678704' '(at2g20860 : 457.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 433.0) no description available & (gnl|cdd|81623 : 323.0) no description available & (reliability: 914.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf06032_48306-54963' '(at2g20860 : 561.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 535.0) no description available & (gnl|cdd|81623 : 412.0) no description available & (reliability: 1122.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF16881;PF04055)' T
'18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf07527_202532-209894' '(at2g20860 : 560.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 535.0) no description available & (gnl|cdd|81623 : 415.0) no description available & (reliability: 1120.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T
'18.12' 'Co-factor and vitamine metabolism.NADH kinase' 'niben101scf20614_133197-138374' '(at1g78590 : 374.0) Encodes a NADH kinase which can synthesize NADPH from NADH; also utilizes NAD+ as substrate although NADH is the preferred substrate.; NAD(H) kinase 3 (NADK3); CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504); Has 2859 Blast hits to 2859 proteins in 1070 species: Archae - 160; Bacteria - 1847; Metazoa - 99; Fungi - 31; Plants - 53; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (q6eqg2|nadhk_orysa : 360.0) Probable NADH kinase (EC 2.7.1.86) - Oryza sativa (Rice) & (gnl|cdd|39382 : 191.0) no description available & (gnl|cdd|30410 : 94.3) no description available & (reliability: 748.0) & (original description: Putative NADK3, Description = NADH kinase, PFAM = PF01513;PF01513)' T
'18.13' 'Co-factor and vitamine metabolism.isochorismatase' 'nbv0.3scaffold14796_23888-40363' '(at3g16190 : 187.0) Isochorismatase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1); Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156; Bacteria - 6040; Metazoa - 0; Fungi - 183; Plants - 97; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|29548 : 105.0) no description available & (reliability: 374.0) & (original description: Putative At3g16190, Description = Probable inactive nicotinamidase At3g16190, PFAM = PF00857)' T
'18.13' 'Co-factor and vitamine metabolism.isochorismatase' 'niben101scf03422_391591-396350' '(at3g16190 : 255.0) Isochorismatase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1); Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156; Bacteria - 6040; Metazoa - 0; Fungi - 183; Plants - 97; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|29548 : 142.0) no description available & (reliability: 510.0) & (original description: Putative At3g16190, Description = Probable inactive nicotinamidase At3g16190, PFAM = PF00857)' T
'18.1001' 'Co-factor and vitamine metabolism' 'nicotinate' 'Co-factor metabolism; energy misc' M
'18.1002' 'Co-factor and vitamine metabolism' 'nicotinamide' 'Co-factor metabolism; energy misc' M
'18.1003' 'Co-factor and vitamine metabolism' 'nad' 'Co-factor metabolism; energy misc' M
'18.1004' 'Co-factor and vitamine metabolism' 'nadh' 'Co-factor metabolism; energy misc' M
'18.1005' 'Co-factor and vitamine metabolism' 'nadp' 'Co-factor metabolism; energy misc' M
'18.1006' 'Co-factor and vitamine metabolism' 'nadph' 'Co-factor metabolism; energy misc' M
'18.1007' 'Co-factor and vitamine metabolism' 'ppi' 'Co-factor metabolism; energy misc' M
'18.1008' 'Co-factor and vitamine metabolism' 'pantothenate' '' M
'18.1009' 'Co-factor and vitamine metabolism.lumichrome' 'lumichrome' '7,8-Dimethylalloxazine; Riboflavin metabolism' M
'19' 'tetrapyrrole synthesis' 'niben044scf00002932ctg021_1-4406' '(at1g45110 : 320.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). & (gnl|cdd|30661 : 268.0) no description available & (reliability: 640.0) & (original description: Putative rsmI, Description = Ribosomal RNA small subunit methyltransferase I, PFAM = PF00590)' T
'19' 'tetrapyrrole synthesis' 'niben101scf01701_1318845-1328044' '(at1g45110 : 424.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). & (gnl|cdd|30661 : 315.0) no description available & (reliability: 848.0) & (original description: Putative rsmI, Description = Ribosomal RNA small subunit methyltransferase I, PFAM = PF00590)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.3scaffold44807_4615-11934' '(at3g25660 : 692.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 614.0) no description available & (gnl|cdd|36425 : 429.0) no description available & (reliability: 1384.0) & (original description: Putative gatA, Description = Glu-ADT subunit A, PFAM = PF01425)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.5scaffold70_1374904-1382335' '(at3g25660 : 491.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 438.0) no description available & (gnl|cdd|36425 : 306.0) no description available & (reliability: 982.0) & (original description: Putative gatA, Description = Glu-ADT subunit A, PFAM = PF01425)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.5scaffold5475_92132-99041' '(at1g48520 : 562.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 537.0) no description available & (gnl|cdd|37649 : 448.0) no description available & (reliability: 1124.0) & (original description: Putative GATB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben044scf00013496ctg003_1-5281' '(at3g25660 : 608.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 562.0) no description available & (gnl|cdd|36425 : 394.0) no description available & (reliability: 1216.0) & (original description: Putative GATA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben044scf00018680ctg005_1-4073' '(at1g48520 : 106.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 82.4) no description available & (reliability: 212.0) & (original description: Putative gatB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf01221_582532-589181' '(at1g48520 : 848.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 726.0) no description available & (gnl|cdd|37649 : 619.0) no description available & (reliability: 1696.0) & (original description: Putative GATB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf01221_584353-588608' '(at1g48520 : 106.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 85.1) no description available & (reliability: 212.0) & (original description: Putative gatB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf02390_138150-151449' '(at3g25660 : 737.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 645.0) no description available & (gnl|cdd|36425 : 448.0) no description available & (reliability: 1474.0) & (original description: Putative GATA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf04754_85898-93738' '(at3g25660 : 749.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 647.0) no description available & (gnl|cdd|36425 : 447.0) no description available & (reliability: 1498.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf04754_90674-108572' '(at3g25660 : 82.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425;PF06881)' T
'19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf05929_645722-651655' '(at1g48520 : 508.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 430.0) no description available & (gnl|cdd|37649 : 371.0) no description available & (reliability: 1016.0) & (original description: Putative gatB, Description = Asp/Glu-ADT subunit B, PFAM = PF02934;PF02637)' T
'19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben044scf00054987ctg007_43-4886' '(p93111|hem11_cucsa : 774.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 717.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 401.0) no description available & (reliability: 1434.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF00745;PF01488;PF05201)' T
'19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben101scf03068_52941-57802' '(p93111|hem11_cucsa : 789.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 722.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 400.0) no description available & (reliability: 1444.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF00745;PF05201;PF01488)' T
'19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben101scf10434_133542-138626' '(p93111|hem11_cucsa : 661.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 623.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 413.0) no description available & (reliability: 1246.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF05201;PF01488;PF00745)' T
'19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf01478_555368-561286' '(p31593|gsa_tobac : 748.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|80484 : 724.0) no description available & (at3g48730 : 712.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (gnl|cdd|36615 : 482.0) no description available & (reliability: 1424.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T
'19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf02553_341224-346454' '(p31593|gsa_tobac : 851.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (at3g48730 : 742.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (gnl|cdd|80484 : 713.0) no description available & (gnl|cdd|36615 : 491.0) no description available & (reliability: 1484.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T
'19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf06382_67309-73321' '(p31593|gsa_tobac : 858.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (at5g63570 : 742.0) Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.; "glutamate-1-semialdehyde-2,1-aminomutase" (GSA1); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity; INVOLVED IN: response to light stimulus, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde 2,1-aminomutase 2 (TAIR:AT3G48730.1); Has 34880 Blast hits to 34874 proteins in 2819 species: Archae - 734; Bacteria - 23560; Metazoa - 547; Fungi - 812; Plants - 385; Viruses - 2; Other Eukaryotes - 8840 (source: NCBI BLink). & (gnl|cdd|80484 : 716.0) no description available & (gnl|cdd|36615 : 483.0) no description available & (reliability: 1484.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T
'19.4' 'tetrapyrrole synthesis.ALA dehydratase' 'niben101scf00087_597304-622835' '(at1g69740 : 635.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (p24493|hem2_spiol : 615.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (ALAD) - Spinacia oleracea (Spinach) & (gnl|cdd|38005 : 492.0) no description available & (gnl|cdd|82912 : 492.0) no description available & (reliability: 1270.0) & (original description: Putative HEMB1, Description = Delta-aminolevulinic acid dehydratase 1, chloroplastic, PFAM = PF00490)' T
'19.4' 'tetrapyrrole synthesis.ALA dehydratase' 'niben101scf15549_24561-38461' '(at1g69740 : 612.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (p30124|hem2_pea : 593.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|82912 : 491.0) no description available & (gnl|cdd|38005 : 489.0) no description available & (reliability: 1224.0) & (original description: Putative HEMB1, Description = Delta-aminolevulinic acid dehydratase 1, chloroplastic, PFAM = PF00490)' T
'19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'nbv0.5scaffold2213_112080-155049' '(q43082|hem3_pea : 529.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 528.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|80490 : 381.0) no description available & (gnl|cdd|38103 : 378.0) no description available & (reliability: 1056.0) & (original description: Putative hemC, Description = Porphobilinogen deaminase, PFAM = PF01379;PF03900)' T
'19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben044scf00050322ctg001_1-4523' '(q43082|hem3_pea : 535.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 527.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|38103 : 387.0) no description available & (gnl|cdd|80490 : 381.0) no description available & (reliability: 1054.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF01379;PF03900)' T
'19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben101scf01728_84278-89572' '(at5g08280 : 528.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (q43082|hem3_pea : 528.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (gnl|cdd|80490 : 381.0) no description available & (gnl|cdd|38103 : 376.0) no description available & (reliability: 1056.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF03900;PF01379)' T
'19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben101scf08564_472897-478023' '(q43082|hem3_pea : 533.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 526.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|38103 : 384.0) no description available & (gnl|cdd|80490 : 380.0) no description available & (reliability: 1052.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF01379;PF03900)' T
'19.6' 'tetrapyrrole synthesis.uroporphyrinogen III synthase' 'nbv0.3scaffold5326_51065-60699' '(at2g26540 : 308.0) Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; HEMD; FUNCTIONS IN: uroporphyrinogen-III synthase activity; INVOLVED IN: uroporphyrinogen III biosynthetic process, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (InterPro:IPR003754); Has 1238 Blast hits to 1238 proteins in 600 species: Archae - 19; Bacteria - 1097; Metazoa - 0; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|31775 : 124.0) no description available & (reliability: 616.0) & (original description: Putative UROS, Description = Uroporphyrinogen-III synthase, chloroplastic, PFAM = PF02602)' T
'19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'nbv0.3scaffold12043_6705-15491' '(q42967|dcup_tobac : 609.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 531.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 422.0) no description available & (gnl|cdd|80524 : 378.0) no description available & (reliability: 1062.0) & (original description: Putative hemE, Description = Uroporphyrinogen decarboxylase, PFAM = PF01208)' T
'19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'nbv0.5scaffold1876_356602-366974' '(at3g14930 : 615.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38083 : 465.0) no description available & (gnl|cdd|80524 : 433.0) no description available & (q42967|dcup_tobac : 400.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 1230.0) & (original description: Putative hemE, Description = Uroporphyrinogen decarboxylase, PFAM = PF01208)' T
'19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf00773_744891-753677' '(q42967|dcup_tobac : 710.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 627.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 506.0) no description available & (gnl|cdd|80524 : 465.0) no description available & (reliability: 1254.0) & (original description: Putative DCUP, Description = Uroporphyrinogen decarboxylase, chloroplastic, PFAM = PF01208)' T
'19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf04036_614466-632002' '(at3g14930 : 620.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38083 : 468.0) no description available & (gnl|cdd|80524 : 433.0) no description available & (q42967|dcup_tobac : 396.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 1240.0) & (original description: Putative HEME1, Description = Uroporphyrinogen decarboxylase 1, chloroplastic, PFAM = PF01208)' T
'19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf07267_211914-224768' '(q42967|dcup_tobac : 744.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 624.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 502.0) no description available & (gnl|cdd|80524 : 462.0) no description available & (reliability: 1248.0) & (original description: Putative DCUP, Description = Uroporphyrinogen decarboxylase, chloroplastic, PFAM = PF01208)' T
'19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf03281_244214-251716' '(q42946|hem6_tobac : 692.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Nicotiana tabacum (Common tobacco) & (at1g03475 : 604.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (gnl|cdd|36731 : 512.0) no description available & (gnl|cdd|65046 : 501.0) no description available & (reliability: 1208.0) & (original description: Putative CPX, Description = Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic, PFAM = PF01218)' T
'19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf09025_233794-239270' '(at5g63290 : 599.0) Radical SAM superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity; INVOLVED IN: oxidation reduction, porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Putative oxygen-independent coproporphyrinogen III oxidase (InterPro:IPR004559), HemN, C-terminal (InterPro:IPR010723), Radical SAM (InterPro:IPR007197); Has 10146 Blast hits to 10146 proteins in 2456 species: Archae - 113; Bacteria - 8401; Metazoa - 78; Fungi - 4; Plants - 37; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (gnl|cdd|76069 : 449.0) no description available & (reliability: 1198.0) & (original description: Putative hemN, Description = HemN, PFAM = PF04055)' T
'19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf09708_1076782-1084850' '(q42946|hem6_tobac : 719.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Nicotiana tabacum (Common tobacco) & (at1g03475 : 611.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (gnl|cdd|36731 : 517.0) no description available & (gnl|cdd|65046 : 504.0) no description available & (reliability: 1222.0) & (original description: Putative CPX, Description = Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic, PFAM = PF01218)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'nbv0.3scaffold29274_1401-7746' '(o24163|ppoc_tobac : 940.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 716.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 441.0) no description available & (gnl|cdd|84018 : 235.0) no description available & (reliability: 1432.0) & (original description: Putative PPXI, Description = Protoporphyrinogen oxidase, chloroplastic, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'nbv0.5scaffold3507_335161-340493' '(o24163|ppoc_tobac : 699.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 528.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 335.0) no description available & (gnl|cdd|84018 : 168.0) no description available & (reliability: 1056.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben044scf00025312ctg002_5050-16076' '(o24163|ppoc_tobac : 740.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 565.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 347.0) no description available & (gnl|cdd|84018 : 173.0) no description available & (reliability: 1130.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben044scf00055219ctg000_1-2791' '(o24164|ppom_tobac : 198.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 149.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (reliability: 298.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, chloroplastic/mitochondrial, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf00110_586966-598691' '(o24163|ppoc_tobac : 983.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 754.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 454.0) no description available & (gnl|cdd|84018 : 240.0) no description available & (reliability: 1508.0) & (original description: Putative PPXI, Description = Protoporphyrinogen oxidase, chloroplastic, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf05955_421144-426521' '(o24163|ppoc_tobac : 774.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 561.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 345.0) no description available & (gnl|cdd|84018 : 174.0) no description available & (reliability: 1122.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T
'19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf12725_34760-45514' '(o24164|ppom_tobac : 978.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 664.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (gnl|cdd|36490 : 404.0) no description available & (gnl|cdd|31425 : 250.0) no description available & (reliability: 1328.0) & (original description: Putative PPXII, Description = Protoporphyrinogen oxidase, mitochondrial, PFAM = PF01593)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'nbv0.5scaffold1207_14216-22070' '(at5g13630 : 2414.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|84160 : 2072.0) no description available & (reliability: 4828.0) & (original description: Putative chlH, Description = Protoporphyrin IX Mg-chelatase subunit H, PFAM = PF11965;PF02514)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben044scf00047285ctg000_7392-11916' '(o22436|chli_tobac : 669.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 616.0) no description available & (at4g18480 : 558.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1116.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben044scf00047538ctg001_15611-20540' '(o22436|chli_tobac : 654.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 599.0) no description available & (at4g18480 : 541.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative bchI, Description = Mg-protoporphyrin IX chelatase, PFAM = PF01078)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf01209_424434-445746' '(o24133|chld_tobac : 1298.0) Magnesium-chelatase subunit chlD, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) - Nicotiana tabacum (Common tobacco) & (at1g08520 : 1064.0) Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.; ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink). & (gnl|cdd|31432 : 319.0) no description available & (reliability: 2128.0) & (original description: Putative CHLD, Description = Magnesium-chelatase subunit ChlD, chloroplastic, PFAM = PF01078;PF13519)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf01308_319104-323925' '(o22436|chli_tobac : 667.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 614.0) no description available & (at4g18480 : 556.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1112.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf04388_30743-38393' '(at5g13630 : 2417.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|84160 : 2072.0) no description available & (reliability: 4834.0) & (original description: Putative CHLH, Description = Magnesium-chelatase subunit ChlH, chloroplastic, PFAM = PF11965;PF02514)' T
'19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf16898_168148-172759' '(o22436|chli_tobac : 652.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 598.0) no description available & (at4g18480 : 541.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T
'19.11' 'tetrapyrrole synthesis.magnesium protoporphyrin IX methyltransferase' 'niben101scf03548_298598-305148' '(at4g25080 : 404.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (gnl|cdd|82288 : 292.0) no description available & (gnl|cdd|36484 : 181.0) no description available & (reliability: 808.0) & (original description: Putative CHLM, Description = Magnesium protoporphyrin IX methyltransferase, chloroplastic, PFAM = PF07109)' T
'19.12' 'tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase' 'nbv0.3scaffold31613_9581-13677' '(q6sjv8|crd1_goshi : 634.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (at3g56940 : 625.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (gnl|cdd|29774 : 532.0) no description available & (reliability: 1250.0) & (original description: Putative zip, Description = Putative desaturase-like protein, PFAM = PF02915)' T
'19.12' 'tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase' 'niben101scf10305_145510-150006' '(q6sjv8|crd1_goshi : 631.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (at3g56940 : 627.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (gnl|cdd|29774 : 531.0) no description available & (reliability: 1254.0) & (original description: Putative zip, Description = Putative desaturase-like protein, PFAM = PF02915)' T
'19.13' 'tetrapyrrole synthesis.divinyl chlorophyllide-a 8-vinyl-reductase' 'niben101scf02752_1263008-1266162' '(at5g18660 : 583.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 233.0) no description available & (reliability: 1166.0) & (original description: Putative DVR, Description = Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic, PFAM = PF13460)' T
'19.13' 'tetrapyrrole synthesis.divinyl chlorophyllide-a 8-vinyl-reductase' 'niben101scf04967_180422-183669' '(at5g18660 : 588.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 231.0) no description available & (reliability: 1176.0) & (original description: Putative DVR, Description = Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic, PFAM = PF13460)' T
'19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf00506_367005-374858' '(q9sdt1|por_dauca : 630.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (at5g54190 : 615.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 430.0) no description available & (gnl|cdd|36422 : 238.0) no description available & (reliability: 1230.0) & (original description: Putative PORA, Description = Protochlorophyllide reductase A, chloroplastic, PFAM = PF00106)' T
'19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf01036_288905-293407' '(q41249|pora_cucsa : 607.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Cucumis sativus (Cucumber) & (at5g54190 : 585.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 432.0) no description available & (gnl|cdd|36422 : 243.0) no description available & (reliability: 1170.0) & (original description: Putative PORA, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T
'19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf06117_90092-94646' '(q9sdt1|por_dauca : 577.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (at5g54190 : 549.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 430.0) no description available & (gnl|cdd|36422 : 235.0) no description available & (reliability: 1098.0) & (original description: Putative POR1, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T
'19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf06120_11907-16493' '(q01289|por_pea : 538.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (at5g54190 : 523.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 434.0) no description available & (gnl|cdd|36422 : 236.0) no description available & (reliability: 1046.0) & (original description: Putative 3PCR, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T
'19.15' 'tetrapyrrole synthesis.chlorophyll synthase' 'niben101scf00149_650188-658997' '(at3g51820 : 578.0) Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.; G4; FUNCTIONS IN: chlorophyll synthetase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bacteriochlorophyll/chlorophyll synthetase (InterPro:IPR006372), Chlorophyll synthase, ChlG (InterPro:IPR011799), UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 2782 Blast hits to 2782 proteins in 800 species: Archae - 310; Bacteria - 1584; Metazoa - 63; Fungi - 24; Plants - 236; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|82277 : 389.0) no description available & (reliability: 1156.0) & (original description: Putative chlg, Description = Chlorophyll synthase, PFAM = PF01040)' T
'19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'nbv0.3scaffold33379_4396-11449' '(at1g44446 : 788.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 774.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 243.0) no description available & (reliability: 1576.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T
'19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf01166_822638-827946' '(at1g44446 : 816.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 795.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 241.0) no description available & (reliability: 1632.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T
'19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf03804_164753-170653' '(at1g44446 : 820.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 796.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 240.0) no description available & (reliability: 1640.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T
'19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf10528_223750-230858' '(at1g44446 : 813.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 790.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 240.0) no description available & (reliability: 1626.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T
'19.20' 'tetrapyrrole synthesis.ferrochelatase' 'nbv0.3scaffold69319_5434-9467' '(p42044|hemh_cucsa : 433.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 404.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 312.0) no description available & (gnl|cdd|85011 : 265.0) no description available & (reliability: 808.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T
'19.20' 'tetrapyrrole synthesis.ferrochelatase' 'nbv0.5scaffold6133_63470-74279' '(p42044|hemh_cucsa : 598.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 557.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 455.0) no description available & (gnl|cdd|85011 : 394.0) no description available & (reliability: 1114.0) & (original description: Putative HEMH, Description = Ferrochelatase-2, chloroplastic, PFAM = PF00762;PF00762)' T
'19.20' 'tetrapyrrole synthesis.ferrochelatase' 'niben044scf00051970ctg002_1-8132' '(p42044|hemh_cucsa : 416.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 374.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 324.0) no description available & (gnl|cdd|85011 : 287.0) no description available & (reliability: 748.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T
'19.20' 'tetrapyrrole synthesis.ferrochelatase' 'niben101scf06955_273358-287128' '(at2g30390 : 696.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (o22101|hemh_orysa : 692.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (gnl|cdd|36535 : 501.0) no description available & (gnl|cdd|85011 : 420.0) no description available & (reliability: 1392.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T
'19.21' 'tetrapyrrole synthesis.heme oxygenase' 'nbv0.3scaffold10044_1-4510' '(at2g26550 : 268.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 217.0) no description available & (gnl|cdd|29310 : 151.0) no description available & (reliability: 536.0) & (original description: Putative HO3, Description = Heme oxygenase 3, chloroplastic, PFAM = PF01126)' T
'19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben044scf00001374ctg006_12045-16549' '(at2g26550 : 270.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 214.0) no description available & (gnl|cdd|29310 : 149.0) no description available & (reliability: 540.0) & (original description: Putative HO2, Description = Probable inactive heme oxygenase 2, chloroplastic, PFAM = PF01126)' T
'19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben101scf01385_1188418-1198986' '(at2g26550 : 271.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 216.0) no description available & (gnl|cdd|29310 : 152.0) no description available & (reliability: 542.0) & (original description: Putative HO1, Description = Heme oxygenase 1, chloroplastic, PFAM = PF01126)' T
'19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben101scf06347_461246-469401' '(at2g26670 : 362.0) Encodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast.; REVERSAL OF THE DET PHENOTYPE 4 (TED4); FUNCTIONS IN: heme oxygenase (decyclizing) activity, heme binding; INVOLVED IN: regulation of meristem growth, heme oxidation, red, far-red light phototransduction, chloroplast-nucleus signaling pathway, phytochromobilin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053); BEST Arabidopsis thaliana protein match is: heme oxygenase 3 (TAIR:AT1G69720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39680 : 248.0) no description available & (gnl|cdd|29310 : 155.0) no description available & (reliability: 724.0) & (original description: Putative HO1, Description = Heme oxygenase 1, chloroplastic, PFAM = PF01126)' T
'19.30' 'tetrapyrrole synthesis.uroporphyrin-III C-methyltransferase' 'nbv0.5scaffold5984_88670-94195' '(at5g40850 : 511.0) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.; urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043). & (gnl|cdd|36740 : 381.0) no description available & (gnl|cdd|81856 : 297.0) no description available & (reliability: 1022.0) & (original description: Putative nirE, Description = Uroporphyrinogen-III methyltransferase, PFAM = PF00590)' T
'19.30' 'tetrapyrrole synthesis.uroporphyrin-III C-methyltransferase' 'niben101scf06162_130349-135802' '(at5g40850 : 518.0) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.; urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043). & (gnl|cdd|36740 : 382.0) no description available & (gnl|cdd|81856 : 296.0) no description available & (reliability: 1036.0) & (original description: Putative nirE, Description = Uroporphyrin-III C-methyltransferase, PFAM = PF00590)' T
'19.32' 'tetrapyrrole synthesis.sirohydrochlorin ferrochelatase' 'niben101scf08227_5112-10464' '(at1g50170 : 253.0) encodes sirohydrochlorin ferrochelatase catalyzing the last step of the siroheme biosynthesis; sirohydrochlorin ferrochelatase B (SIRB); FUNCTIONS IN: sirohydrochlorin ferrochelatase activity; INVOLVED IN: response to oxidative stress, siroheme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CbiX (InterPro:IPR002762); Has 1927 Blast hits to 1707 proteins in 620 species: Archae - 186; Bacteria - 1447; Metazoa - 1; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|85754 : 118.0) no description available & (reliability: 506.0) & (original description: Putative cbiX, Description = Sirohydrochlorin ferrochelatase, PFAM = PF01903)' T
'19.33' 'tetrapyrrole synthesis.5-aminolevulinate synthase' '' ''
'19.40' 'tetrapyrrole synthesis.regulation' 'nbv0.3scaffold4972_54714-61872' '(at3g14110 : 321.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 642.0) & (original description: Putative FLU, Description = Protein FLUORESCENT IN BLUE LIGHT, chloroplastic, PFAM = PF13424)' T
'19.40' 'tetrapyrrole synthesis.regulation' 'nbv0.5scaffold2355_92715-95497' '(at3g59400 : 215.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 165.0) no description available & (reliability: 430.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T
'19.40' 'tetrapyrrole synthesis.regulation' 'niben044scf00002134ctg024_10407-13189' '(at3g59400 : 216.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 167.0) no description available & (reliability: 432.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T
'19.40' 'tetrapyrrole synthesis.regulation' 'niben044scf00047740ctg003_5232-12422' '(at3g14110 : 323.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 646.0) & (original description: Putative FLU, Description = Protein flourescent in blue light, PFAM = PF13424)' T
'19.40' 'tetrapyrrole synthesis.regulation' 'niben101scf03113_304715-309143' '(at3g59400 : 213.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 162.0) no description available & (reliability: 426.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T
'19.40' 'tetrapyrrole synthesis.regulation' 'niben101scf32746_97062-103736' '(at3g14110 : 292.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 584.0) & (original description: Putative FLU, Description = Protein flourescent in blue light, PFAM = PF13424)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'nbv0.5scaffold149_567188-979358' '(at3g02280 : 810.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 626.0) no description available & (gnl|cdd|30718 : 398.0) no description available & (q05001|ncpr_catro : 214.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1620.0) & (original description: Putative ATR3, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00258;PF00175;PF00667)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben044scf00016086ctg002_924-4286' '(at1g17100 : 225.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (gnl|cdd|68407 : 205.0) no description available & (reliability: 450.0) & (original description: Putative Os01g0210500, Description = Os01g0210500 protein, PFAM = PF04832)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben044scf00055256ctg000_1-3023' '(gnl|cdd|68407 : 189.0) no description available & (at1g17100 : 143.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative Os01g0235300, Description = Os01g0235300 protein, PFAM = PF04832)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 462.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf01609_35815-38920' '(at5g43860 : 375.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70680 : 367.0) no description available & (q9mv14|clh1_citsi : 214.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 750.0) & (original description: Putative CLH2, Description = Chlorophyllase-2, chloroplastic, PFAM = PF07224)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf02725_596420-599987' '(at1g17100 : 221.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (gnl|cdd|68407 : 200.0) no description available & (reliability: 442.0) & (original description: Putative Os01g0210500, Description = Os01g0210500 protein, PFAM = PF04832)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf03445_259610-266107' '(gnl|cdd|68407 : 189.0) no description available & (at1g17100 : 140.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os01g0235300, Description = Os01g0235300 protein, PFAM = PF04832)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf08470_688284-691742' '(at5g43860 : 374.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70680 : 364.0) no description available & (q9mv14|clh1_citsi : 202.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 748.0) & (original description: Putative CLH2, Description = Chlorophyllase-2, chloroplastic, PFAM = PF07224)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf09372_119480-134462' '(at3g02280 : 834.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 634.0) no description available & (gnl|cdd|30718 : 400.0) no description available & (q05001|ncpr_catro : 244.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1668.0) & (original description: Putative ATR3, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00258;PF00667;PF00175)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf09372_119974-123043' '(at3g02280 : 382.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 278.0) no description available & (gnl|cdd|30718 : 244.0) no description available & (q05001|ncpr_catro : 170.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 764.0) & (original description: Putative NDOR1, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00667;PF00175)' T
'19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf10418_15226-24755' '(at2g44520 : 468.0) cytochrome c oxidase 10 (COX10); FUNCTIONS IN: protoheme IX farnesyltransferase activity, prenyltransferase activity; INVOLVED IN: heme o biosynthetic process, heme biosynthetic process; LOCATED IN: integral to membrane, mitochondrial membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protohaem IX farnesyltransferase, mitochondria (InterPro:IPR016315), Protohaem IX farnesyltransferase (InterPro:IPR006369), UbiA prenyltransferase (InterPro:IPR000537); Has 7990 Blast hits to 7990 proteins in 1845 species: Archae - 160; Bacteria - 4430; Metazoa - 177; Fungi - 179; Plants - 66; Viruses - 0; Other Eukaryotes - 2978 (source: NCBI BLink). & (gnl|cdd|36594 : 352.0) no description available & (gnl|cdd|30458 : 213.0) no description available & (reliability: 936.0) & (original description: Putative COX10, Description = Protoheme IX farnesyltransferase, mitochondrial, PFAM = PF01040)' T
'20' 'stress' 'nbv0.3scaffold56814_4251-12873' '(at3g16030 : 356.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|47913 : 231.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 662.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF00704;PF07714)' T
'20' 'stress' 'nbv0.5scaffold884_47543-55928' '(at1g62740 : 761.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (q43468|stip_soybn : 634.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 594.0) no description available & (reliability: 1522.0) & (original description: Putative hop, Description = Stress-induced-phosphoprotein 1, PFAM = PF13181;PF13432;PF00515;PF13414)' T
'20' 'stress' 'niben044scf00011613ctg012_2983-5831' '(at1g12270 : 300.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 37869 Blast hits to 17250 proteins in 1367 species: Archae - 1337; Bacteria - 11482; Metazoa - 9184; Fungi - 2650; Plants - 3694; Viruses - 39; Other Eukaryotes - 9483 (source: NCBI BLink). & (gnl|cdd|35768 : 263.0) no description available & (q43468|stip_soybn : 190.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 600.0) & (original description: Putative hop, Description = Stress-induced-phosphoprotein 1, PFAM = PF00515;PF13414)' T
'20' 'stress' 'niben101scf00735_630391-632692' '(gnl|cdd|70078 : 123.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20' 'stress' 'niben101scf01826_524171-526704' '(at4g03230 : 154.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 101.0) no description available & (reliability: 278.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF11883)' T
'20' 'stress' 'niben101scf02832_407589-412023' '(at4g34190 : 115.0) Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.; stress enhanced protein 1 (SEP1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative 37135, Description = Stress enhanced protein 1, chloroplastic, PFAM = )' T
'20' 'stress' 'niben101scf03062_183655-187223' '(at5g05350 : 607.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461), Protein of unknown function DUF2985 (InterPro:IPR021369); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G10980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86720 : 85.8) no description available & (reliability: 1164.0) & (original description: Putative CPPR, Description = Cys-rich domain protein, PFAM = PF11204;PF04749)' T
'20' 'stress' 'niben101scf03374_528090-533827' '(at4g12400 : 747.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43468|stip_soybn : 630.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 595.0) no description available & (reliability: 1494.0) & (original description: Putative HOP3, Description = Hsp70-Hsp90 organizing protein 3, PFAM = PF13181;PF00515;PF00515;PF13414)' T
'20' 'stress' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 612.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T
'20' 'stress' 'niben101scf05830_588929-593481' '(at2g21970 : 207.0) stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein; stress enhanced protein 2 (SEP2); Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative 37500, Description = Stress enhanced protein 2, chloroplastic, PFAM = PF00504)' T
'20' 'stress' 'niben101scf06295_557741-563549' '(at4g23290 : 341.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|47913 : 235.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF07714;PF00704)' T
'20' 'stress' 'niben101scf06775_119301-121609' '(gnl|cdd|70078 : 114.0) no description available & (at1g01170 : 108.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20' 'stress' 'niben101scf09387_331318-338348' '(at1g62740 : 764.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (q43468|stip_soybn : 634.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 597.0) no description available & (reliability: 1528.0) & (original description: Putative STIP1, Description = Stress-induced-phosphoprotein 1, PFAM = PF13414;PF13432;PF13181;PF00515)' T
'20' 'stress' 'niben101scf09698_11536-13991' '(gnl|cdd|70078 : 113.0) no description available & (at1g01170 : 105.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold532_23942-29235' '(at1g32370 : 81.6) Encodes a 122 amino acid basic protein involved in tobamovirus multiplication in planta.; tobamovirus multiplication 2B (TOM2B); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative TOM2B, Description = Tobamovirus multiplication 2B protein isoform 2, PFAM = )' T
'20.1' 'stress.biotic' 'nbv0.3scaffold2867_2671-6647' '(at1g64140 : 479.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T
'20.1' 'stress.biotic' 'nbv0.3scaffold4045_1-5209' '(gnl|cdd|39857 : 342.0) no description available & (at1g53350 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 245.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold7003_8237-11297' '(gnl|cdd|84754 : 127.0) no description available & (at1g70890 : 85.1) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold8423_1689-4210' '(p11670|prb1_tobac : 350.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 203.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 155.0) no description available & (gnl|cdd|38227 : 123.0) no description available & (reliability: 406.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold10279_36711-39469' '(at5g36970 : 197.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 138.0) no description available & (reliability: 394.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold11523_27448-30591' '(at2g15220 : 290.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 274.0) no description available & (reliability: 580.0) & (original description: Putative Sb01g018500, Description = Putative uncharacterized protein Sb01g018500, PFAM = PF04450)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold14027_4519-9856' '(at3g18165 : 285.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 251.0) no description available & (gnl|cdd|38306 : 207.0) no description available & (reliability: 570.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27 homolog, PFAM = PF05700)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold19848_6539-11814' '(at1g20780 : 155.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold20257_923-32406' '(at4g19040 : 1199.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 238.0) no description available & (reliability: 2398.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold23510_4986-9267' '(gnl|cdd|39857 : 259.0) no description available & (gnl|cdd|85132 : 177.0) no description available & (at1g50180 : 169.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400004873, Description = NBS-LRR class resistance protein Fy12-Ry1, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold23851_1760-11409' '(at4g19810 : 378.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|47913 : 251.0) no description available & (gnl|cdd|38017 : 247.0) no description available & (reliability: 756.0) & (original description: Putative CRA1, Description = Putative chitinase-related agglutinin 1 protein, PFAM = PF00704)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold24931_10911-19010' '(at5g61240 : 490.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 118.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 105.0) no description available & (reliability: 980.0) & (original description: Putative BnaC09g05210D, Description = BnaC09g05210D protein, PFAM = PF13855;PF13855)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold26152_15727-21325' '(at4g33300 : 816.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39857 : 177.0) no description available & (gnl|cdd|85132 : 153.0) no description available & (reliability: 1632.0) & (original description: Putative shz, Description = Putative CC-NBS-LRR protein, PFAM = PF00931;PF05659)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold28669_1853-8694' '(gnl|cdd|39857 : 284.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (at3g46530 : 218.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold30312_6110-10107' '(at1g64140 : 474.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T
'20.1' 'stress.biotic' 'nbv0.3scaffold38461_2447-6721' '(at1g20030 : 327.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 250.0) no description available & (p83332|tlp1_prupe : 238.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 654.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold58848_4958-9379' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 213.0) no description available & (reliability: 540.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold59977_156-5843' '(at1g05850 : 482.0) Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.; POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|29557 : 268.0) no description available & (gnl|cdd|39939 : 250.0) no description available & (q09023|chi2_brana : 187.0) Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) & (reliability: 964.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold64516_1-3648' '(gnl|cdd|39857 : 202.0) no description available & (gnl|cdd|85132 : 195.0) no description available & (at1g53350 : 161.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold71385_1285-4233' '(at1g77700 : 324.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 222.0) no description available & (q9fsg7|tp1a_maldo : 168.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 648.0) & (original description: Putative BFTP, Description = Pathogenesis-related group 5 protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold71775_1-5077' '(q9m3t9|dad1_betve : 178.0) Defender against cell death 1 (DAD-1) - Betula verrucosa (White birch) (Betula pendula) & (at2g35520 : 176.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36957 : 140.0) no description available & (gnl|cdd|85869 : 136.0) no description available & (reliability: 352.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold73570_1095-8031' '(at1g20780 : 985.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1970.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold82183_1-4645' '(gnl|cdd|39857 : 291.0) no description available & (gnl|cdd|85132 : 240.0) no description available & (at1g50180 : 231.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold84532_1-4683' '(at5g24620 : 342.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1). & (gnl|cdd|47535 : 262.0) no description available & (q9fsg7|tp1a_maldo : 211.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 684.0) & (original description: Putative PR5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold84765_1-2913' '(gnl|cdd|39857 : 274.0) no description available & (gnl|cdd|85132 : 230.0) no description available & (at3g07040 : 210.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold89868_332-2931' '(at3g20600 : 103.0) Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response.; non race-specific disease resistance 1 (NDR1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20590.1); Has 471 Blast hits to 471 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 471; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative NDR1, Description = NDR1-like protein, PFAM = )' T
'20.1' 'stress.biotic' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 880.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'nbv0.3scaffold170273_1-749' '(at5g17540 : 138.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 120.0) no description available & (reliability: 276.0) & (original description: Putative AAT, Description = Benzyl alcohol O-benzoyltransferase, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold254_615344-625980' '(gnl|cdd|69947 : 462.0) no description available & (at2g02180 : 405.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold400_154001-165080' '(at1g20780 : 216.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 84.9) no description available & (reliability: 432.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold613_301155-304101' '(at1g77700 : 322.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 220.0) no description available & (q9fsg7|tp1a_maldo : 167.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 644.0) & (original description: Putative BFTP, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold1064_274119-278114' '(gnl|cdd|39857 : 232.0) no description available & (gnl|cdd|85132 : 215.0) no description available & (at3g46530 : 179.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative R1, Description = R1, PFAM = PF12061;PF00931)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold1313_337009-342854' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 247.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF13499;PF00931)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold1748_40763-75235' '(at4g19040 : 1196.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 239.0) no description available & (reliability: 2392.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold1954_106377-108916' '(at4g31470 : 196.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3047 Blast hits to 2958 proteins in 378 species: Archae - 0; Bacteria - 60; Metazoa - 1662; Fungi - 337; Plants - 890; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q40374|pr1_medtr : 156.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 132.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 392.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold2063_97911-102093' '(at5g61240 : 214.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 88.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 428.0) & (original description: Putative EILP, Description = Leucine-rich repeat (LRR) family protein isoform 1, PFAM = PF13855;PF13855)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 276.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold3701_21082-26857' '(at4g38660 : 282.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 253.0) no description available & (p83332|tlp1_prupe : 206.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 564.0) & (original description: Putative TLP1, Description = Thaumatin-like protein 1, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold4024_57052-63156' '(gnl|cdd|39857 : 262.0) no description available & (at5g35450 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 402.0) & (original description: Putative RGA88, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold4088_28446-41248' '(gnl|cdd|69947 : 402.0) no description available & (at2g02180 : 325.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold4823_101120-104668' '(at3g54420 : 241.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 231.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 192.0) no description available & (gnl|cdd|39939 : 147.0) no description available & (reliability: 482.0) & (original description: Putative chiB, Description = Class IV chitinase, PFAM = PF00182;PF00182;PF00187)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold5979_23358-27840' '(at4g36010 : 304.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 243.0) no description available & (p83332|tlp1_prupe : 230.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 608.0) & (original description: Putative BnaC03g76850D, Description = BnaC03g76850D protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold7153_70334-73440' '(gnl|cdd|47913 : 267.0) no description available & (gnl|cdd|38017 : 234.0) no description available & (at4g19810 : 222.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold7331_5906-23942' '(at5g35450 : 193.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 380.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T
'20.1' 'stress.biotic' 'nbv0.5scaffold9200_1600-14766' '(gnl|cdd|39857 : 303.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 198.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931;PF01419;PF01419;PF01419)' T
'20.1' 'stress.biotic' 'niben044scf00000307ctg000_3233-5784' '(p07053|pr1b_tobac : 322.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 192.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 160.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 382.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben044scf00001929ctg023_1-3524' '(at1g64140 : 482.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 964.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben044scf00002773ctg004_3764-6591' '(p14232|tga1a_tobac : 408.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 313.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bZIP83, Description = Transcription factor bZIP83, PFAM = PF14144)' T
'20.1' 'stress.biotic' 'niben044scf00002905ctg007_11371-16001' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00004222ctg031_795-5530' '(gnl|cdd|84754 : 129.0) no description available & (at1g70830 : 102.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben044scf00004779ctg012_1080-5327' '(at5g17540 : 350.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 310.0) no description available & (o24645|hcbt1_diaca : 143.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 700.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben044scf00004802ctg003_1-3129' '(gnl|cdd|39857 : 185.0) no description available & (gnl|cdd|85132 : 178.0) no description available & (at3g07040 : 166.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00005464ctg007_6316-10179' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at1g50180 : 207.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BS2, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00006004ctg000_6517-9292' '(gnl|cdd|85132 : 158.0) no description available & (gnl|cdd|39857 : 142.0) no description available & (at3g46530 : 115.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative Pvr9, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00006274ctg015_1-4294' '(gnl|cdd|39857 : 287.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g59218 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58848.2). & (reliability: 416.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00007762ctg031_2916-5432' '(at1g05760 : 80.9) Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance; restricted tev movement 1 (RTM1); FUNCTIONS IN: sugar binding; INVOLVED IN: response to virus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G05770.1); Has 829 Blast hits to 525 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 828; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF01419)' T
'20.1' 'stress.biotic' 'niben044scf00008754ctg000_8453-13136' '(at3g07040 : 334.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 298.0) no description available & (gnl|cdd|85132 : 200.0) no description available & (reliability: 668.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00009480ctg006_4598-6863' '(at5g36970 : 208.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 117.0) no description available & (reliability: 416.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben044scf00011370ctg000_9704-13803' '(at5g15870 : 752.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 545.0) no description available & (gnl|cdd|37465 : 504.0) no description available & (reliability: 1504.0) & (original description: Putative glu2, Description = Beta-1,3-glucanase 2, PFAM = PF03639)' T
'20.1' 'stress.biotic' 'niben044scf00013685ctg003_1300-4525' '(at3g09590 : 109.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p09042|pr1c_tobac : 92.0) Pathogenesis-related protein 1C precursor (PR-1C) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47528 : 85.8) no description available & (gnl|cdd|38227 : 85.7) no description available & (reliability: 218.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben044scf00014217ctg010_826-9050' '(at5g64930 : 313.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T
'20.1' 'stress.biotic' 'niben044scf00015460ctg002_804-5797' '(at1g75800 : 339.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G20030.2); Has 1631 Blast hits to 1621 proteins in 190 species: Archae - 2; Bacteria - 41; Metazoa - 64; Fungi - 79; Plants - 1416; Viruses - 4; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47535 : 253.0) no description available & (p83332|tlp1_prupe : 244.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 678.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben044scf00015551ctg010_5121-10099' '(at3g48090 : 426.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative EDS1B, Description = Protein EDS1B, PFAM = PF01764)' T
'20.1' 'stress.biotic' 'niben044scf00016992ctg005_172-4778' '(gnl|cdd|39857 : 143.0) no description available & (at1g50180 : 132.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 99.0) no description available & (reliability: 238.0) & (original description: Putative CN, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00017953ctg005_6521-10078' '(at3g54420 : 322.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 308.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 265.0) no description available & (gnl|cdd|39939 : 223.0) no description available & (reliability: 644.0) & (original description: Putative Cht4, Description = Chitinase 4, PFAM = PF00182;PF00187)' T
'20.1' 'stress.biotic' 'niben044scf00018239ctg001_2702-10661' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 200.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00018802ctg003_4920-10401' '(at1g47890 : 388.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 112.0) no description available & (reliability: 704.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF08263;PF00560)' T
'20.1' 'stress.biotic' 'niben044scf00019156ctg002_343-2100' '(at2g15080 : 95.5) receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 148753 Blast hits to 34404 proteins in 1310 species: Archae - 57; Bacteria - 11889; Metazoa - 32225; Fungi - 1644; Plants - 90370; Viruses - 42; Other Eukaryotes - 12526 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13516;PF08263)' T
'20.1' 'stress.biotic' 'niben044scf00019248ctg004_1-873' '(gnl|cdd|85132 : 179.0) no description available & (gnl|cdd|39857 : 145.0) no description available & (at1g50180 : 133.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PGSC0003DMG400020740, Description = NBS-coding resistance protein-like protein RGA11, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00021945ctg000_6901-10480' '(at4g38660 : 308.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 259.0) no description available & (p83332|tlp1_prupe : 235.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 616.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben044scf00023299ctg001_10924-15008' '(gnl|cdd|39857 : 145.0) no description available & (at3g46730 : 103.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 86.9) no description available & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00024166ctg001_1-3243' '(p24091|chi2_tobac : 563.0) Endochitinase B precursor (EC 3.2.1.14) (CHN-B) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 431.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 408.0) no description available & (gnl|cdd|39939 : 271.0) no description available & (reliability: 862.0) & (original description: Putative CHN50, Description = Endochitinase B, PFAM = PF00182;PF00187)' T
'20.1' 'stress.biotic' 'niben044scf00024406ctg001_14887-19582' '(gnl|cdd|39857 : 276.0) no description available & (gnl|cdd|85132 : 253.0) no description available & (at3g50950 : 208.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00024857ctg001_1137-6480' '(gnl|cdd|39857 : 417.0) no description available & (at3g46530 : 412.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 253.0) no description available & (reliability: 824.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00026128ctg004_1139-6034' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00026706ctg004_1404-7473' '(gnl|cdd|39857 : 344.0) no description available & (at5g35450 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 243.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00027774ctg007_1-5689' '(at5g49290 : 265.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 147.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 122.0) no description available & (reliability: 530.0) & (original description: Putative PGSC0003DMG402009338, Description = Putative ovule protein, PFAM = PF08263;PF00560;PF13855;PF13855;PF13855;PF13855)' T
'20.1' 'stress.biotic' 'niben044scf00028827ctg001_10315-15546' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (at3g46530 : 230.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PGSC0003DMG400005170, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00031330ctg002_1-5674' '(at2g35520 : 157.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (q9m3t9|dad1_betve : 157.0) Defender against cell death 1 (DAD-1) - Betula verrucosa (White birch) (Betula pendula) & (gnl|cdd|36957 : 124.0) no description available & (gnl|cdd|85869 : 119.0) no description available & (reliability: 314.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T
'20.1' 'stress.biotic' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T
'20.1' 'stress.biotic' 'niben044scf00032590ctg000_713-2472' '(at1g74190 : 112.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 89.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 206.0) & (original description: Putative Eix1, Description = Receptor-like protein, PFAM = PF13516;PF12799;PF00560)' T
'20.1' 'stress.biotic' 'niben044scf00033257ctg001_1-7071' '(gnl|cdd|69947 : 400.0) no description available & (at2g02180 : 322.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'niben044scf00033398ctg006_19612-27054' '(at2g21340 : 508.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 116.0) no description available & (gnl|cdd|36561 : 81.2) no description available & (reliability: 1016.0) & (original description: Putative EDS5, Description = Enhanced disease susceptibility 5, PFAM = PF01554)' T
'20.1' 'stress.biotic' 'niben044scf00036576ctg001_6952-10694' '(at5g49290 : 95.1) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative PGSC0003DMG400015687, Description = , PFAM = PF08263;PF13855)' T
'20.1' 'stress.biotic' 'niben044scf00040944ctg007_2406-7951' '(at5g35450 : 192.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 376.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00045592ctg002_1-3970' '(gnl|cdd|39857 : 386.0) no description available & (at1g50180 : 377.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 260.0) no description available & (reliability: 734.0) & (original description: Putative PGSC0003DMG400008306, Description = NBS resistance protein RGA50, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben044scf00045986ctg003_5-2099' '(at5g49290 : 117.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = )' T
'20.1' 'stress.biotic' 'niben044scf00055943ctg000_6924-19318' '(at4g17910 : 356.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|35632 : 191.0) no description available & (gnl|cdd|34666 : 188.0) no description available & (reliability: 712.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T
'20.1' 'stress.biotic' 'niben044scf00056804ctg004_4530-7293' '(at1g78780 : 185.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 181.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 370.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben044scf00058490ctg000_49-5654' '(at1g02120 : 145.0) Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system.; VASCULAR ASSOCIATED DEATH1 (VAD1); INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: C2 domain-containing protein / GRAM domain-containing protein (TAIR:AT3G59660.1); Has 1155 Blast hits to 1034 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 222; Plants - 157; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative VAD1, Description = GRAM domain-containing protein 1A, PFAM = PF16016)' T
'20.1' 'stress.biotic' 'niben044scf00060616ctg000_7818-10878' '(p16273|prpx_horvu : 176.0) Pathogen-related protein - Hordeum vulgare (Barley) & (at1g78780 : 156.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101ctg08688_1-882' '(gnl|cdd|84754 : 105.0) no description available & (at1g70840 : 89.7) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf00087_695689-698228' '(at4g31470 : 194.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3047 Blast hits to 2958 proteins in 378 species: Archae - 0; Bacteria - 60; Metazoa - 1662; Fungi - 337; Plants - 890; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q40374|pr1_medtr : 155.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 129.0) no description available & (gnl|cdd|38227 : 106.0) no description available & (reliability: 388.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf00152_2194774-2279546' '(at1g78780 : 282.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 186.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 564.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf00165_77074-79709' '(at3g44220 : 253.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22200.1); Has 838 Blast hits to 838 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 153.0) no description available & (reliability: 506.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T
'20.1' 'stress.biotic' 'niben101scf00168_379316-381272' '(at1g74170 : 115.0) receptor like protein 13 (RLP13); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 15 (TAIR:AT1G74190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 84.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 226.0) & (original description: Putative At1g74170, Description = Leucine-rich repeat-containing protein, PFAM = PF00560)' T
'20.1' 'stress.biotic' 'niben101scf00228_1248945-1260437' '(gnl|cdd|84754 : 160.0) no description available & (at1g70840 : 124.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf00262_247168-251564' '(at4g11220 : 231.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 184.0) no description available & (gnl|cdd|66169 : 183.0) no description available & (reliability: 452.0) & (original description: Putative uaz7c01g04, Description = Reticulon-like protein, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf00270_179587-186177' '(at1g05850 : 475.0) Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.; POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|29557 : 266.0) no description available & (gnl|cdd|39939 : 249.0) no description available & (q09023|chi2_brana : 182.0) Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) & (reliability: 950.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf00313_748013-752182' '(at5g17540 : 498.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 467.0) no description available & (o24645|hcbt1_diaca : 155.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 996.0) & (original description: Putative HSR201, Description = Benzyl alcohol O-benzoyltransferase, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben101scf00319_84542-101566' '(at5g64930 : 337.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf00338_1119953-1122729' '(at1g54540 : 193.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 914 Blast hits to 913 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 914; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 119.0) no description available & (reliability: 356.0) & (original description: Putative NHL25, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf00478_642697-649036' '(at2g24390 : 177.0) AIG2-like (avirulence induced gene) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT4G31310.1). & (reliability: 354.0) & (original description: Putative At5g39720, Description = AIG2-like protein, PFAM = PF06094)' T
'20.1' 'stress.biotic' 'niben101scf00528_151185-154976' '(gnl|cdd|47535 : 256.0) no description available & (at1g18250 : 225.0) encodes a thaumatin-like protein; ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p83332|tlp1_prupe : 208.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 450.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf00542_592531-597473' '(gnl|cdd|39857 : 246.0) no description available & (at3g07040 : 230.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 177.0) no description available & (reliability: 460.0) & (original description: Putative PGSC0003DMG400013308, Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 306.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf00574_451130-461498' '(at5g61240 : 494.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 117.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 988.0) & (original description: Putative BnaC09g05210D, Description = BnaC09g05210D protein, PFAM = PF13855;PF13855)' T
'20.1' 'stress.biotic' 'niben101scf00650_231412-238911' '(gnl|cdd|85132 : 311.0) no description available & (gnl|cdd|39857 : 290.0) no description available & (at1g59780 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061;PF12061)' T
'20.1' 'stress.biotic' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1164.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf00712_794399-799377' '(at1g20780 : 975.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1950.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T
'20.1' 'stress.biotic' 'niben101scf00761_645774-655160' '(gnl|cdd|39857 : 306.0) no description available & (at1g53350 : 243.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 235.0) no description available & (reliability: 468.0) & (original description: Putative PGSC0003DMG400013486, Description = Disease resistance protein, putative, PFAM = PF00931;PF12061;PF12061)' T
'20.1' 'stress.biotic' 'niben101scf00781_697373-701439' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at1g50180 : 224.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative rx, Description = Disease resistance protein RGH5, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 438.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T
'20.1' 'stress.biotic' 'niben101scf00883_1597166-1599750' '(at2g21100 : 144.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 278.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T
'20.1' 'stress.biotic' 'niben101scf00919_248983-259801' '(at5g64930 : 335.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf00946_83509-86339' '(at3g11660 : 223.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.; NDR1/HIN1-like 1 (NHL1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G52470.1); Has 917 Blast hits to 917 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 141.0) no description available & (reliability: 446.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf00953_300641-303196' '(p11670|prb1_tobac : 288.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 184.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 116.0) no description available & (reliability: 368.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf00953_315511-318632' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 199.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 165.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 398.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf00953_542627-545115' '(p11670|prb1_tobac : 205.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at1g50060 : 186.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT1G50050.1); Has 2790 Blast hits to 2723 proteins in 351 species: Archae - 0; Bacteria - 60; Metazoa - 1420; Fungi - 326; Plants - 897; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 110.0) no description available & (reliability: 372.0) & (original description: Putative PR1B1, Description = Pathogenesis-related leaf protein 6, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf00960_421102-425544' '(at5g65210 : 417.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 348.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 834.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF14144;PF00170)' T
'20.1' 'stress.biotic' 'niben101scf00986_75659-86022' '(at1g74190 : 179.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 98.6) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 346.0) & (original description: Putative BnaC06g35080D, Description = BnaC06g35080D protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf01013_734995-802431' '(gnl|cdd|39857 : 106.0) no description available & (gnl|cdd|85132 : 105.0) no description available & (at3g46530 : 97.8) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01013_796881-800452' '(at1g58390 : 194.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39857 : 188.0) no description available & (reliability: 368.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01013_838054-845165' '(gnl|cdd|39857 : 343.0) no description available & (gnl|cdd|85132 : 251.0) no description available & (at1g53350 : 247.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PGSC0003DMG400007462, Description = NBS-LRR class resistance protein Fy2-Ry2, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01015_180232-183828' '(p09762|win2_soltu : 278.0) Wound-induced protein WIN2 precursor - Solanum tuberosum (Potato) & (at3g04720 : 206.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|64814 : 206.0) no description available & (reliability: 412.0) & (original description: Putative WIN1, Description = Wound-induced protein WIN1, PFAM = PF00187;PF00967)' T
'20.1' 'stress.biotic' 'niben101scf01017_610120-615953' '(at1g53350 : 518.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|39857 : 497.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (reliability: 1022.0) & (original description: Putative PGSC0003DMG400029344, Description = Disease resistance protein RPP13, putative, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01027_258416-262335' '(at1g64140 : 464.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf01061_180126-184226' '(at5g17540 : 380.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 319.0) no description available & (o24645|hcbt1_diaca : 148.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 760.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben101scf01066_354735-359679' '(at3g16920 : 486.0) Encodes a chitinase-like protein expressed predominantly in stems. Mutants accumulate ligning in etiolated hypocotyls.; chitinase-like protein 2 (CTL2); FUNCTIONS IN: chitinase activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT1G05850.1); Has 1961 Blast hits to 1960 proteins in 411 species: Archae - 0; Bacteria - 465; Metazoa - 25; Fungi - 3; Plants - 1425; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|29557 : 269.0) no description available & (gnl|cdd|39939 : 259.0) no description available & (p06215|chit_phavu : 189.0) Endochitinase precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 972.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf01145_13490-18180' '(gnl|cdd|39857 : 324.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at5g43470 : 246.0) Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.; RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8); FUNCTIONS IN: nucleotide binding; INVOLVED IN: defense response to virus, response to light stimulus, response to other organism, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PGSC0003DMG400018462, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01145_337165-346481' '(at4g19040 : 1098.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 239.0) no description available & (reliability: 2196.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T
'20.1' 'stress.biotic' 'niben101scf01189_465369-468148' '(at5g36970 : 201.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 137.0) no description available & (reliability: 402.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf01212_251991-262439' '(at4g18470 : 306.0) Negative regulator of systemic acquired resistance (SAR), repressor of pathogenesis-related PR gene expression which is removed by NPR1 upon induction of SAR. Encodes leucine-rich nuclear protein. Conserved in plants, with putative orthologs found in several plant species. Many NPR1-dependent PR gene are specifically derepressed in the sni1 mutant. The structural similarity of SNI1 to Armadillo repeat proteins implies that SNI1 may form a scaffold for interaction with proteins that modulate transcription. Histone modification may be involved in SNI1-mediated repression of PR genes.; SUPPRESSOR OF NPR1-1, INDUCIBLE 1 (SNI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative SNI1, Description = At4g18470, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf01214_313614-318333' '(gnl|cdd|39857 : 299.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g58390 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01291_534445-537685' '(at2g46170 : 226.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 196.0) no description available & (gnl|cdd|66169 : 177.0) no description available & (reliability: 440.0) & (original description: Putative PGSC0003DMG400006308, Description = Reticulon-like protein, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf01319_718815-723452' '(at1g75800 : 362.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G20030.2); Has 1631 Blast hits to 1621 proteins in 190 species: Archae - 2; Bacteria - 41; Metazoa - 64; Fungi - 79; Plants - 1416; Viruses - 4; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47535 : 255.0) no description available & (p83332|tlp1_prupe : 244.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 724.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf01326_1210830-1215413' '(at5g40020 : 314.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G38660.1); Has 1558 Blast hits to 1540 proteins in 173 species: Archae - 0; Bacteria - 31; Metazoa - 56; Fungi - 80; Plants - 1384; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47535 : 201.0) no description available & (p83335|tlp2_prupe : 171.0) Thaumatin-like protein 2 precursor (PpAZ8) - Prunus persica (Peach) & (reliability: 628.0) & (original description: Putative olp, Description = Osmotin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf01341_187800-190521' '(at2g15220 : 282.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 270.0) no description available & (reliability: 564.0) & (original description: Putative At2g15130, Description = Plant basic secretory family protein, PFAM = PF04450)' T
'20.1' 'stress.biotic' 'niben101scf01375_252209-256009' '(at4g11220 : 265.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 243.0) no description available & (gnl|cdd|66169 : 230.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400019959, Description = Reticulon-like protein, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 344.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf01392_120910-127676' '(at1g20780 : 172.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 82.6) no description available & (reliability: 344.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF00514;PF04564)' T
'20.1' 'stress.biotic' 'niben101scf01398_90211-94931' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 259.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01466_180275-185432' '(gnl|cdd|39857 : 137.0) no description available & (at3g07040 : 115.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 115.0) no description available & (reliability: 230.0) & (original description: Putative PGSC0003DMG400006316, Description = Disease resistance protein RPM1, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01466_185652-189635' '(at3g07040 : 307.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 305.0) no description available & (gnl|cdd|85132 : 207.0) no description available & (reliability: 614.0) & (original description: Putative PGSC0003DMG400006316, Description = NBS resistance protein RGA49, PFAM = PF00931;PF13855)' T
'20.1' 'stress.biotic' 'niben101scf01466_186051-190360' '(gnl|cdd|39857 : 313.0) no description available & (at3g07040 : 309.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 618.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf01653_371064-373119' '(at5g02140 : 335.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 215.0) no description available & (q9fsg7|tp1a_maldo : 171.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 670.0) & (original description: Putative Os11g0706600, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf01756_326559-331424' '(at2g46170 : 278.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 261.0) no description available & (gnl|cdd|66169 : 248.0) no description available & (reliability: 550.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf01789_319106-323380' '(gnl|cdd|47913 : 267.0) no description available & (at4g19810 : 246.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|38017 : 236.0) no description available & (reliability: 492.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T
'20.1' 'stress.biotic' 'niben101scf01831_163236-166545' '(q9fsg7|tp1a_maldo : 259.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 241.0) no description available & (at4g38670 : 236.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative TL1, Description = Thaumatin-like protein 1a, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf01831_194436-197464' '(at2g17860 : 195.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1602 Blast hits to 1583 proteins in 180 species: Archae - 0; Bacteria - 43; Metazoa - 56; Fungi - 78; Plants - 1409; Viruses - 4; Other Eukaryotes - 12 (source: NCBI BLink). & (q9fsg7|tp1a_maldo : 194.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 185.0) no description available & (reliability: 390.0) & (original description: Putative pr5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf01917_500806-504467' '(at5g61240 : 227.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 89.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 454.0) & (original description: Putative EILP, Description = LRR-GTPase of the ROCO family, PFAM = PF13855;PF13855)' T
'20.1' 'stress.biotic' 'niben101scf01934_514657-518146' '(gnl|cdd|66675 : 124.0) no description available & (at1g22900 : 115.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative Ccrd_007776, Description = Plant disease resistance response protein, PFAM = PF03018)' T
'20.1' 'stress.biotic' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 358.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf01999_720022-722561' '(p07053|pr1b_tobac : 300.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 190.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 148.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 380.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf02041_1714-5025' '(p17514|chiq_tobac : 460.0) Acidic endochitinase Q precursor (EC 3.2.1.14) (Pathogenesis-related protein Q) (PR-Q) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84590 : 342.0) no description available & (at3g12500 : 290.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 202.0) no description available & (reliability: 580.0) & (original description: Putative chi1, Description = Chitinase, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf02044_228419-231239' '(at2g15220 : 239.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 222.0) no description available & (reliability: 478.0) & (original description: Putative At2g15220, Description = At2g15220/F15A23.4, PFAM = PF04450)' T
'20.1' 'stress.biotic' 'niben101scf02049_363187-367354' '(at1g78780 : 333.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 202.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 666.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf02057_248617-261383' '(gnl|cdd|39857 : 296.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at5g35450 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative , Description = NBS resistance protein RGA40, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02133_55542-62165' '(gnl|cdd|39857 : 328.0) no description available & (at1g53350 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 232.0) no description available & (reliability: 500.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02168_181187-186678' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 233.0) no description available & (at1g59780 : 221.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF12061;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02171_48486-51616' '(at3g54420 : 290.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|29557 : 282.0) no description available & (p27054|chi4_phavu : 271.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|39939 : 230.0) no description available & (reliability: 580.0) & (original description: Putative chi, Description = Class IV chitinase, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf02248_86863-93919' '(gnl|cdd|39857 : 307.0) no description available & (at1g53350 : 267.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 522.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02303_171828-178118' '(gnl|cdd|36842 : 303.0) no description available & (at5g47120 : 271.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbd8|bi1_orysa : 236.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 94.9) no description available & (reliability: 542.0) & (original description: Putative BI1, Description = Bax inhibitor 1, PFAM = PF01027)' T
'20.1' 'stress.biotic' 'niben101scf02400_186245-220453' '(at1g02120 : 426.0) Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system.; VASCULAR ASSOCIATED DEATH1 (VAD1); INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: C2 domain-containing protein / GRAM domain-containing protein (TAIR:AT3G59660.1); Has 1155 Blast hits to 1034 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 222; Plants - 157; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36250 : 135.0) no description available & (reliability: 852.0) & (original description: Putative VAD1, Description = Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic, PFAM = PF16016;PF02893)' T
'20.1' 'stress.biotic' 'niben101scf02401_32596-37305' '(at3g18165 : 122.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 115.0) no description available & (gnl|cdd|38306 : 91.3) no description available & (reliability: 244.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27-like protein, PFAM = PF05700)' T
'20.1' 'stress.biotic' 'niben101scf02407_552738-558032' '(gnl|cdd|36842 : 99.0) no description available & (at5g47120 : 95.9) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400036059, Description = , PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf02410_70010-74538' '(gnl|cdd|84590 : 406.0) no description available & (p24091|chi2_tobac : 385.0) Endochitinase B precursor (EC 3.2.1.14) (CHN-B) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 354.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 269.0) no description available & (reliability: 708.0) & (original description: Putative CHI14, Description = Basic endochitinase, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 904.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf02518_177053-189921' '(gnl|cdd|39857 : 180.0) no description available & (at3g07040 : 137.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 82.6) no description available & (reliability: 274.0) & (original description: Putative glysoja_000650, Description = NB-ARC domain disease resistance protein, putative, PFAM = PF00931;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02544_94867-109997' '(at3g52430 : 390.0) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. Required for the ssi2-dependent heightened resistance to GPA.; PHYTOALEXIN DEFICIENT 4 (PAD4); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: senescence-associated gene 101 (TAIR:AT5G14930.2); Has 722 Blast hits to 622 proteins in 73 species: Archae - 0; Bacteria - 23; Metazoa - 17; Fungi - 11; Plants - 620; Viruses - 1; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|73213 : 88.7) no description available & (reliability: 780.0) & (original description: Putative BnaCnng61630D, Description = BnaCnng61630D protein, PFAM = PF01764)' T
'20.1' 'stress.biotic' 'niben101scf02549_375227-383809' '(gnl|cdd|69947 : 448.0) no description available & (at2g02180 : 370.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'niben101scf02553_268025-273368' '(gnl|cdd|39857 : 440.0) no description available & (at3g46530 : 432.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 254.0) no description available & (reliability: 864.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02610_186011-190384' '(at1g70830 : 249.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84754 : 159.0) no description available & (reliability: 498.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407;PF00407)' T
'20.1' 'stress.biotic' 'niben101scf02618_422300-425424' '(gnl|cdd|84754 : 121.0) no description available & (at1g70880 : 97.4) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf02618_510410-513464' '(gnl|cdd|84754 : 120.0) no description available & (at1g70830 : 100.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf02681_205582-211674' '(at4g37000 : 270.0) Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae.; ACCELERATED CELL DEATH 2 (ACD2); FUNCTIONS IN: red chlorophyll catabolite reductase activity; INVOLVED IN: chlorophyll catabolic process, defense response, incompatible interaction, regulation of programmed cell death, regulation of plant-type hypersensitive response; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Red chlorophyll catabolite reductase (InterPro:IPR009439); Has 181 Blast hits to 181 proteins in 30 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69899 : 262.0) no description available & (q9mtq6|rccr_horvu : 194.0) Red chlorophyll catabolite reductase (EC 1.-.-.-) (RCC reductase) (HvRCCR) (Fragment) - Hordeum vulgare (Barley) & (reliability: 540.0) & (original description: Putative RCCR, Description = Red chlorophyll catabolite reductase, chloroplastic, PFAM = PF06405)' T
'20.1' 'stress.biotic' 'niben101scf02688_107772-112438' '(gnl|cdd|39857 : 338.0) no description available & (at5g35450 : 312.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 221.0) no description available & (reliability: 592.0) & (original description: Putative tm-2, Description = Tm-2 protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf02705_161833-167654' '(at5g47120 : 332.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36842 : 295.0) no description available & (q9mbd8|bi1_orysa : 263.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 89.9) no description available & (reliability: 664.0) & (original description: Putative tegt, Description = Bax inhibitor 1, PFAM = PF01027)' T
'20.1' 'stress.biotic' 'niben101scf02821_1332591-1348674' '(at4g17910 : 108.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PIGW, Description = Phosphatidylinositol-glycan biosynthesis class W protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf02854_1003263-1010336' '(at1g74190 : 474.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 195.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35693 : 105.0) no description available & (reliability: 878.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF13516;PF13516;PF08263;PF00560;PF00560;PF00560;PF00560;PF13855)' T
'20.1' 'stress.biotic' 'niben101scf02854_1003312-1011274' '(at1g74190 : 479.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 194.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35693 : 104.0) no description available & (reliability: 912.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF08263;PF13516;PF13516;PF13855;PF00560;PF00560;PF00560;PF00560)' T
'20.1' 'stress.biotic' 'niben101scf02899_729470-732177' '(at3g11650 : 209.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast; NDR1/HIN1-like 2 (NHL2); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 3 (TAIR:AT5G06320.1); Has 1008 Blast hits to 1007 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1008; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 146.0) no description available & (reliability: 418.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf02902_95480-101913' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 245.0) no description available & (at3g46530 : 244.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative SW5F, Description = NBS resistance protein RGA34, PFAM = PF12061;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 950.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf03048_148366-153619' '(gnl|cdd|39857 : 257.0) no description available & (at5g48620 : 229.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 156.0) no description available & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03085_821064-834714' '(at4g17910 : 372.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|34666 : 199.0) no description available & (gnl|cdd|35632 : 193.0) no description available & (reliability: 744.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T
'20.1' 'stress.biotic' 'niben101scf03135_29112-33949' '(gnl|cdd|39857 : 286.0) no description available & (at1g58390 : 268.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|85132 : 159.0) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03135_50744-55577' '(gnl|cdd|39857 : 314.0) no description available & (at1g53350 : 258.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 238.0) no description available & (reliability: 488.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03150_435587-441029' '(gnl|cdd|39857 : 258.0) no description available & (gnl|cdd|85132 : 237.0) no description available & (at1g53350 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 712.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf03262_60244-64598' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 256.0) no description available & (at3g46530 : 219.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03385_86981-203918' '(at2g15220 : 294.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 278.0) no description available & (reliability: 588.0) & (original description: Putative At2g15220, Description = At2g15220/F15A23.4, PFAM = PF04450)' T
'20.1' 'stress.biotic' 'niben101scf03385_245897-249117' '(at2g15220 : 239.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 217.0) no description available & (reliability: 478.0) & (original description: Putative At2g15130, Description = Plant basic secretory family protein, PFAM = PF04450)' T
'20.1' 'stress.biotic' 'niben101scf03461_520893-525067' '(gnl|cdd|39857 : 261.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at3g46530 : 221.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061;PF12061)' T
'20.1' 'stress.biotic' 'niben101scf03479_647736-651580' '(at3g25070 : 94.0) Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.; RPM1 interacting protein 4 (RIN4); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2); Has 373 Blast hits to 371 proteins in 56 species: Archae - 0; Bacteria - 8; Metazoa - 13; Fungi - 2; Plants - 331; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative POPTR_0002s24680g, Description = RPM1-interacting protein 4, PFAM = PF05627)' T
'20.1' 'stress.biotic' 'niben101scf03479_647918-654277' '(at3g25070 : 87.8) Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.; RPM1 interacting protein 4 (RIN4); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2); Has 373 Blast hits to 371 proteins in 56 species: Archae - 0; Bacteria - 8; Metazoa - 13; Fungi - 2; Plants - 331; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative POPTR_0002s24680g, Description = RPM1-interacting protein 4, PFAM = PF05627)' T
'20.1' 'stress.biotic' 'niben101scf03631_121307-126633' '(at5g42340 : 650.0) Plant U-Box 15 (PUB15); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 7951 Blast hits to 5407 proteins in 313 species: Archae - 0; Bacteria - 45; Metazoa - 2582; Fungi - 655; Plants - 3768; Viruses - 3; Other Eukaryotes - 898 (source: NCBI BLink). & (q64ha9|spl11_orysa : 393.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 97.6) no description available & (reliability: 1300.0) & (original description: Putative PUB15, Description = U-box domain-containing protein 15, PFAM = PF00514;PF00514;PF04564)' T
'20.1' 'stress.biotic' 'niben101scf03702_445663-456235' '(gnl|cdd|39857 : 312.0) no description available & (at5g35450 : 262.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 231.0) no description available & (reliability: 488.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061)' T
'20.1' 'stress.biotic' 'niben101scf03820_224534-227484' '(at1g75040 : 273.0) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.; pathogenesis-related gene 5 (PR5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1613 Blast hits to 1588 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 84; Plants - 1422; Viruses - 4; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 189.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 546.0) & (original description: Putative At1g75040, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf03893_370308-373249' '(gnl|cdd|84754 : 139.0) no description available & (at1g70890 : 90.5) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf03905_164939-167349' '(gnl|cdd|66675 : 99.0) no description available & (at1g22900 : 89.4) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = Disease resistance-responsive, dirigent domain protein, PFAM = PF03018)' T
'20.1' 'stress.biotic' 'niben101scf03934_455057-462723' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 201.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf03937_260048-263715' '(at1g77700 : 330.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 230.0) no description available & (q9fsg7|tp1a_maldo : 175.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 660.0) & (original description: Putative BFTP, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf03949_50308-53886' '(p29059|chi3_tobac : 541.0) Endochitinase 3 precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 402.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 402.0) no description available & (gnl|cdd|39939 : 264.0) no description available & (reliability: 804.0) & (original description: Putative CHN14, Description = Endochitinase 3, PFAM = PF00187;PF00182)' T
'20.1' 'stress.biotic' 'niben101scf03959_64470-69140' '(gnl|cdd|39857 : 264.0) no description available & (gnl|cdd|85132 : 216.0) no description available & (at5g35450 : 204.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061)' T
'20.1' 'stress.biotic' 'niben101scf04053_214372-216908' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 202.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 161.0) no description available & (gnl|cdd|38227 : 121.0) no description available & (reliability: 404.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf04053_251966-254283' '(p11670|prb1_tobac : 177.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at2g14610 : 169.0) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.; pathogenesis-related gene 1 (PR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to vitamin B1, response to jasmonic acid stimulus, systemic acquired resistance, defense response; LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3124 Blast hits to 3017 proteins in 378 species: Archae - 0; Bacteria - 64; Metazoa - 1706; Fungi - 335; Plants - 914; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|29108 : 138.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 338.0) & (original description: Putative PR1, Description = Pathogenesis-related protein1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf04223_78416-97107' '(at4g38670 : 362.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47535 : 242.0) no description available & (p83332|tlp1_prupe : 234.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 724.0) & (original description: Putative PR5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf04223_215227-217790' '(at2g21100 : 140.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 111.0) no description available & (reliability: 266.0) & (original description: Putative DIR, Description = Plant disease resistance response protein, PFAM = PF03018)' T
'20.1' 'stress.biotic' 'niben101scf04403_204534-217531' '(gnl|cdd|85132 : 215.0) no description available & (gnl|cdd|39857 : 207.0) no description available & (at1g50180 : 187.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RGA86, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf04563_198056-201601' '(o65740|def2_capan : 92.4) Defensin J1-2 precursor - Capsicum annuum (Bell pepper) & (at2g02100 : 82.8) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.; low-molecular-weight cysteine-rich 69 (LCR69); FUNCTIONS IN: peptidase inhibitor activity; INVOLVED IN: defense response; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 68 (TAIR:AT2G02130.1); Has 400 Blast hits to 400 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T
'20.1' 'stress.biotic' 'niben101scf04636_4120-6668' '(at3g03480 : 81.3) acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (CHAT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G17540.1); Has 2522 Blast hits to 2511 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 44; Plants - 2476; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben101scf04644_69838-73151' '(at3g54420 : 327.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 307.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 263.0) no description available & (gnl|cdd|39939 : 230.0) no description available & (reliability: 654.0) & (original description: Putative EP3, Description = Endochitinase EP3, PFAM = PF00187;PF00182)' T
'20.1' 'stress.biotic' 'niben101scf04664_299578-310677' '(at2g21340 : 632.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 141.0) no description available & (gnl|cdd|36561 : 122.0) no description available & (reliability: 1264.0) & (original description: Putative DTX46, Description = Protein DETOXIFICATION 46, chloroplastic, PFAM = PF01554)' T
'20.1' 'stress.biotic' 'niben101scf04845_128320-135281' '(gnl|cdd|39857 : 273.0) no description available & (at1g50180 : 238.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 230.0) no description available & (reliability: 476.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1122.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf05005_210756-213370' '(gnl|cdd|70773 : 135.0) no description available & (at5g06320 : 128.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.; NDR1/HIN1-like 3 (NHL3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, defense response to bacterium, response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative hin9, Description = Harpin inducing protein 1-like 9, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 308.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1' 'stress.biotic' 'niben101scf05177_365946-370540' '(at3g46530 : 434.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39857 : 430.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (reliability: 868.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf05226_309812-314896' '(at5g42340 : 579.0) Plant U-Box 15 (PUB15); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 7951 Blast hits to 5407 proteins in 313 species: Archae - 0; Bacteria - 45; Metazoa - 2582; Fungi - 655; Plants - 3768; Viruses - 3; Other Eukaryotes - 898 (source: NCBI BLink). & (q64ha9|spl11_orysa : 348.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 88.8) no description available & (reliability: 1158.0) & (original description: Putative PUB15, Description = U-box domain-containing protein 15, PFAM = PF00514;PF00514;PF04564)' T
'20.1' 'stress.biotic' 'niben101scf05300_30633-45160' '(at2g21340 : 609.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 154.0) no description available & (gnl|cdd|36561 : 113.0) no description available & (reliability: 1218.0) & (original description: Putative DTX46, Description = Protein DETOXIFICATION 46, chloroplastic, PFAM = PF01554)' T
'20.1' 'stress.biotic' 'niben101scf05306_263311-266536' '(at3g09590 : 111.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p07053|pr1b_tobac : 93.6) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38227 : 91.9) no description available & (gnl|cdd|47528 : 88.9) no description available & (reliability: 222.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf05405_242661-245079' '(at5g63660 : 81.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.; PDF2.5; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 68 (TAIR:AT2G02130.1); Has 396 Blast hits to 396 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative DEF1, Description = Scorpion toxin-like knottin superfamily protein, PFAM = PF00304)' T
'20.1' 'stress.biotic' 'niben101scf05554_556781-560957' '(at1g77700 : 380.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 256.0) no description available & (p33679|zeam_maize : 187.0) Zeamatin precursor - Zea mays (Maize) & (reliability: 760.0) & (original description: Putative BnaCnng11310D, Description = BnaCnng11310D protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf05566_208921-237684' '(at3g07040 : 333.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 293.0) no description available & (gnl|cdd|85132 : 200.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf05566_231037-237144' '(gnl|cdd|39857 : 195.0) no description available & (gnl|cdd|85132 : 187.0) no description available & (at3g07040 : 171.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf05617_135063-142901' '(at1g20780 : 217.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 85.3) no description available & (reliability: 434.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T
'20.1' 'stress.biotic' 'niben101scf05629_24917-27863' '(at5g02140 : 285.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 227.0) no description available & (p83332|tlp1_prupe : 177.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 570.0) & (original description: Putative pco079405, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf05678_123120-131187' '(at5g15870 : 898.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 659.0) no description available & (gnl|cdd|37465 : 615.0) no description available & (reliability: 1796.0) & (original description: Putative GBP1, Description = Beta-glucan-binding protein, PFAM = PF03639)' T
'20.1' 'stress.biotic' 'niben101scf05955_26105-31740' '(at1g20780 : 141.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T
'20.1' 'stress.biotic' 'niben101scf05956_148540-153357' '(gnl|cdd|36842 : 304.0) no description available & (at5g47120 : 293.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbd8|bi1_orysa : 251.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 93.7) no description available & (reliability: 586.0) & (original description: Putative tegt, Description = Bax inhibitor 1, PFAM = PF01027)' T
'20.1' 'stress.biotic' 'niben101scf06059_165561-169252' '(gnl|cdd|39857 : 274.0) no description available & (at1g50180 : 247.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 458.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf06133_112822-133715' '(gnl|cdd|69947 : 452.0) no description available & (at2g02180 : 385.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'niben101scf06218_359927-370791' '(at1g20030 : 342.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 248.0) no description available & (p83332|tlp1_prupe : 239.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 684.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf06218_453606-458572' '(at4g24180 : 318.0) Root-specific expression activated in response to rhizobacteria and ACC. Role in induced systemic resistance.; THAUMATIN-LIKE PROTEIN 1 (TLP1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to other organism, induced systemic resistance, response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: root vascular system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G38660.1); Has 1607 Blast hits to 1581 proteins in 180 species: Archae - 0; Bacteria - 47; Metazoa - 54; Fungi - 78; Plants - 1413; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47535 : 256.0) no description available & (p83332|tlp1_prupe : 220.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 636.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf06305_523347-527445' '(at1g64140 : 510.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 1020.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf06347_190640-195390' '(gnl|cdd|39857 : 292.0) no description available & (gnl|cdd|85132 : 239.0) no description available & (at1g53350 : 205.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf06347_192215-195405' '(gnl|cdd|85132 : 193.0) no description available & (gnl|cdd|39857 : 178.0) no description available & (at3g46530 : 124.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative RGA90, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf06473_18941-39970' '(gnl|cdd|39857 : 314.0) no description available & (at3g46730 : 250.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 249.0) no description available & (reliability: 478.0) & (original description: Putative GPA2, Description = Disease resistance protein RGH5, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf06553_12240-56028' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 199.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative NBS209, Description = NBS-coding resistance gene analog, PFAM = PF01419;PF01419;PF01419;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf06570_460134-463945' '(at1g78780 : 154.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 146.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 308.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf06720_216736-221502' '(at3g48080 : 434.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative EDS1, Description = Protein EDS1, PFAM = PF01764)' T
'20.1' 'stress.biotic' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1006.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T
'20.1' 'stress.biotic' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 208.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T
'20.1' 'stress.biotic' 'niben101scf07096_128938-132296' '(gnl|cdd|84754 : 148.0) no description available & (at1g70850 : 122.0) MLP-like protein 34 (MLP34); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf07169_115388-118197' '(at3g49750 : 305.0) receptor like protein 44 (RLP44); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 57 (TAIR:AT5G65830.1); Has 65414 Blast hits to 15809 proteins in 634 species: Archae - 17; Bacteria - 2183; Metazoa - 2191; Fungi - 213; Plants - 57499; Viruses - 0; Other Eukaryotes - 3311 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative RLP57, Description = At5g65830, PFAM = PF13855)' T
'20.1' 'stress.biotic' 'niben101scf07298_9470-11026' '(gnl|cdd|85132 : 154.0) no description available & (gnl|cdd|39857 : 138.0) no description available & (at3g46530 : 110.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative hero, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf07451_83944-87557' '(at1g73620 : 352.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.1); Has 1554 Blast hits to 1550 proteins in 171 species: Archae - 0; Bacteria - 25; Metazoa - 54; Fungi - 76; Plants - 1392; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47535 : 278.0) no description available & (p83332|tlp1_prupe : 214.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 704.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf07488_11575-17792' '(gnl|cdd|39857 : 395.0) no description available & (at4g26090 : 296.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|85132 : 208.0) no description available & (reliability: 592.0) & (original description: Putative PGSC0003DMG400013736, Description = , PFAM = PF13855;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf07491_45913-48718' '(p08252|chi1_tobac : 568.0) Endochitinase A precursor (EC 3.2.1.14) (CHN-A) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 434.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 412.0) no description available & (gnl|cdd|39939 : 272.0) no description available & (reliability: 868.0) & (original description: Putative CHN50, Description = Endochitinase B, PFAM = PF00182;PF00187)' T
'20.1' 'stress.biotic' 'niben101scf07817_291879-294601' '(gnl|cdd|86681 : 144.0) no description available & (at1g33900 : 139.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33930.1); Has 1258 Blast hits to 1107 proteins in 117 species: Archae - 0; Bacteria - 93; Metazoa - 786; Fungi - 6; Plants - 257; Viruses - 8; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative AIG1, Description = AIG1-like protein, PFAM = PF04548)' T
'20.1' 'stress.biotic' 'niben101scf07926_416831-423500' '(p14232|tga1a_tobac : 498.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 391.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 782.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF00170;PF14144)' T
'20.1' 'stress.biotic' 'niben101scf08006_139457-145297' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at5g48620 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative R1A, Description = Late blight resistance protein R1-A, PFAM = PF12061;PF00931)' T
'20.1' 'stress.biotic' 'niben101scf08020_650930-653616' '(at2g35980 : 190.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.; YELLOW-LEAF-SPECIFIC GENE 9 (YLS9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, leaf senescence, response to other organism; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1046 Blast hits to 1046 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 159.0) no description available & (reliability: 352.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf08447_261110-263721' '(gnl|cdd|84754 : 162.0) no description available & (at1g70840 : 144.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative MLP31, Description = MLP-like protein 31, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf08519_334208-343575' '(gnl|cdd|69947 : 393.0) no description available & (at2g02180 : 306.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'20.1' 'stress.biotic' 'niben101scf08597_247316-252105' '(gnl|cdd|39857 : 334.0) no description available & (at3g46530 : 268.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 252.0) no description available & (reliability: 536.0) & (original description: Putative PGSC0003DMG400013891, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf08670_40900-47603' '(at4g18470 : 324.0) Negative regulator of systemic acquired resistance (SAR), repressor of pathogenesis-related PR gene expression which is removed by NPR1 upon induction of SAR. Encodes leucine-rich nuclear protein. Conserved in plants, with putative orthologs found in several plant species. Many NPR1-dependent PR gene are specifically derepressed in the sni1 mutant. The structural similarity of SNI1 to Armadillo repeat proteins implies that SNI1 may form a scaffold for interaction with proteins that modulate transcription. Histone modification may be involved in SNI1-mediated repression of PR genes.; SUPPRESSOR OF NPR1-1, INDUCIBLE 1 (SNI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative SNI1, Description = At4g18470, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf08698_190710-194352' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 228.0) no description available & (at1g59780 : 219.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400021169, Description = , PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf08723_258097-263085' '(at4g36010 : 306.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 231.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 612.0) & (original description: Putative TL1, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf08773_66401-71803' '(at3g18165 : 306.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 248.0) no description available & (gnl|cdd|38306 : 204.0) no description available & (reliability: 612.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27 homolog, PFAM = PF05700)' T
'20.1' 'stress.biotic' 'niben101scf08973_20694-26934' '(p14232|tga1a_tobac : 631.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 424.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF14144;PF00170)' T
'20.1' 'stress.biotic' 'niben101scf09442_136968-140988' '(gnl|cdd|84590 : 359.0) no description available & (p29059|chi3_tobac : 344.0) Endochitinase 3 precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 322.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 241.0) no description available & (reliability: 644.0) & (original description: Putative chi1, Description = Chitinase, PFAM = PF00182)' T
'20.1' 'stress.biotic' 'niben101scf09455_133796-136473' '(at3g09590 : 132.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (q00008|prms_maize : 127.0) Pathogenesis-related protein PRMS precursor - Zea mays (Maize) & (gnl|cdd|29108 : 121.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 264.0) & (original description: Putative PGSC0003DMG400023936, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf09716_255000-267644' '(gnl|cdd|39857 : 368.0) no description available & (at5g35450 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 504.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf09976_56683-60951' '(at4g11220 : 304.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 249.0) no description available & (gnl|cdd|66169 : 232.0) no description available & (reliability: 596.0) & (original description: Putative RTNLB2, Description = Reticulon-like protein B2, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf10441_89565-93978' '(at5g17540 : 366.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 324.0) no description available & (o24645|hcbt1_diaca : 151.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 732.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben101scf10566_10520-15005' '(at1g27620 : 582.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid, pollen tube; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G40230.1); Has 2626 Blast hits to 2616 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 66; Plants - 2554; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 240.0) no description available & (o24645|hcbt1_diaca : 155.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1164.0) & (original description: Putative BnaA09g27830D, Description = BnaA09g27830D protein, PFAM = PF02458)' T
'20.1' 'stress.biotic' 'niben101scf10767_459096-486067' '(gnl|cdd|39857 : 309.0) no description available & (at1g53350 : 272.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 526.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf11110_92669-106018' '(p16273|prpx_horvu : 229.0) Pathogen-related protein - Hordeum vulgare (Barley) & (at1g78780 : 219.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T
'20.1' 'stress.biotic' 'niben101scf11169_103964-106838' '(at5g02140 : 339.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 232.0) no description available & (p83332|tlp1_prupe : 194.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 678.0) & (original description: Putative Os11g0706600, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf11214_100610-104640' '(gnl|cdd|47913 : 251.0) no description available & (at4g19810 : 241.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|38017 : 216.0) no description available & (reliability: 482.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T
'20.1' 'stress.biotic' 'niben101scf11232_190910-195009' '(at5g15870 : 740.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 539.0) no description available & (gnl|cdd|37465 : 497.0) no description available & (reliability: 1480.0) & (original description: Putative glu2, Description = Beta-1,3-glucanase 2, PFAM = PF03639)' T
'20.1' 'stress.biotic' 'niben101scf11232_214331-218496' '(at5g15870 : 899.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 661.0) no description available & (gnl|cdd|37465 : 633.0) no description available & (reliability: 1798.0) & (original description: Putative gbp, Description = Glycoside hydrolase family 81 protein, PFAM = PF03639)' T
'20.1' 'stress.biotic' 'niben101scf11283_70239-73353' '(gnl|cdd|84754 : 119.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MLP, Description = Putative major latex-like protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf11355_91205-95376' '(at5g15870 : 929.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 650.0) no description available & (gnl|cdd|37465 : 614.0) no description available & (reliability: 1858.0) & (original description: Putative gbp, Description = Beta-glucan binding protein, PFAM = PF03639)' T
'20.1' 'stress.biotic' 'niben101scf11546_54365-57524' '(gnl|cdd|84754 : 122.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.1' 'stress.biotic' 'niben101scf11564_180262-182894' '(at3g11660 : 223.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.; NDR1/HIN1-like 1 (NHL1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G52470.1); Has 917 Blast hits to 917 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 134.0) no description available & (reliability: 446.0) & (original description: Putative HIN1, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf11636_43892-47311' '(at4g38660 : 296.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 252.0) no description available & (p83332|tlp1_prupe : 228.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 592.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T
'20.1' 'stress.biotic' 'niben101scf11676_11563-17792' '(at5g49290 : 262.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 151.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 122.0) no description available & (reliability: 524.0) & (original description: Putative PGSC0003DMG402009338, Description = Putative ovule protein, PFAM = PF13855;PF13855;PF00560;PF08263)' T
'20.1' 'stress.biotic' 'niben101scf12045_744963-747690' '(p29062|pr4a_tobac : 225.0) Pathogenesis-related protein PR-4A precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64814 : 206.0) no description available & (at3g04720 : 178.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative pi1, Description = Pathogenesis-related protein 4, PFAM = PF00967)' T
'20.1' 'stress.biotic' 'niben101scf12305_13030-18279' '(gnl|cdd|39857 : 296.0) no description available & (at5g48620 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 227.0) no description available & (reliability: 448.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf13168_106469-111611' '(at5g65210 : 384.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 768.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF00170;PF14144)' T
'20.1' 'stress.biotic' 'niben101scf13231_178055-183850' '(gnl|cdd|39857 : 256.0) no description available & (at5g35450 : 185.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 180.0) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400004873, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf13394_42957-46569' '(at4g11220 : 305.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 249.0) no description available & (gnl|cdd|66169 : 233.0) no description available & (reliability: 596.0) & (original description: Putative RTNLB2, Description = Reticulon-like protein B2, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf13842_126015-142638' '(at1g47890 : 403.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 184.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 126.0) no description available & (reliability: 744.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF08263;PF00560;PF13855)' T
'20.1' 'stress.biotic' 'niben101scf13926_197831-205737' '(p07053|pr1b_tobac : 289.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 186.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 162.0) no description available & (gnl|cdd|38227 : 130.0) no description available & (reliability: 368.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf14536_23366-25980' '(at3g20600 : 134.0) Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response.; non race-specific disease resistance 1 (NDR1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20590.1); Has 471 Blast hits to 471 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 471; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative NDR1, Description = Protein NDR1, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf14922_129346-137187' '(at1g20780 : 221.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 86.4) no description available & (q64ha9|spl11_orysa : 84.7) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04826;PF04564)' T
'20.1' 'stress.biotic' 'niben101scf17834_1-3294' '(at4g23630 : 222.0) VIRB2-interacting protein 1 (BTI1); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 1242 Blast hits to 1240 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 11; Plants - 505; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37003 : 195.0) no description available & (gnl|cdd|66169 : 178.0) no description available & (reliability: 444.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf17839_525462-529811' '(gnl|cdd|39857 : 313.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at5g35450 : 235.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative , Description = NBS resistance protein RGA41, PFAM = PF00931)' T
'20.1' 'stress.biotic' 'niben101scf23152_39515-43936' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 212.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG402028903, Description = Reticulon-like protein, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf23606_72255-74854' '(at4g25780 : 229.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3029 Blast hits to 2936 proteins in 376 species: Archae - 0; Bacteria - 66; Metazoa - 1646; Fungi - 332; Plants - 881; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (q40374|pr1_medtr : 164.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 143.0) no description available & (gnl|cdd|38227 : 115.0) no description available & (reliability: 458.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T
'20.1' 'stress.biotic' 'niben101scf28925_22656-26422' '(at4g11220 : 272.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 253.0) no description available & (gnl|cdd|66169 : 237.0) no description available & (reliability: 528.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T
'20.1' 'stress.biotic' 'niben101scf30946_42139-44771' '(at3g44220 : 252.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22200.1); Has 838 Blast hits to 838 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 153.0) no description available & (reliability: 504.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T
'20.1' 'stress.biotic' 'niben101scf32536_44432-49671' '(at1g33970 : 332.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1). & (gnl|cdd|86681 : 277.0) no description available & (reliability: 664.0) & (original description: Putative AIG1, Description = Protein AIG1, PFAM = PF04548)' T
'20.1' 'stress.biotic' 'niben101scf33214_37431-45474' '(at4g29940 : 269.0) Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.; pathogenesis related homeodomain protein A (PRHA); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G19510.1). & (p46605|hox1a_maize : 178.0) Homeobox protein HOX1A - Zea mays (Maize) & (gnl|cdd|39500 : 144.0) no description available & (reliability: 538.0) & (original description: Putative HD2, Description = HD domain class transcription factor, PFAM = PF00046;PF00628)' T
'20.1' 'stress.biotic' 'niben101scf33820_14311-19824' '(q9zra3|dad1_pea : 183.0) Defender against cell death 1 (DAD-1) (Peadad) - Pisum sativum (Garden pea) & (at2g35520 : 182.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36957 : 143.0) no description available & (gnl|cdd|85869 : 139.0) no description available & (reliability: 364.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T
'20.1' 'stress.biotic' 'niben101scf37563_18993-22872' '(at4g38660 : 285.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 260.0) no description available & (p83332|tlp1_prupe : 211.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 570.0) & (original description: Putative TL1, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold31093_3443-9948' '(at5g60010 : 972.0) ferric reductase-like transmembrane component family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: ferric reductase-like transmembrane component family protein (TAIR:AT3G45810.1); Has 1927 Blast hits to 1788 proteins in 283 species: Archae - 0; Bacteria - 154; Metazoa - 723; Fungi - 353; Plants - 523; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|35262 : 599.0) no description available & (gnl|cdd|87433 : 171.0) no description available & (reliability: 1944.0) & (original description: Putative RBOHH, Description = Putative respiratory burst oxidase homolog protein H, PFAM = PF08030;PF08414;PF08022;PF01794)' T
'20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold45577_4806-16523' '(at1g64060 : 1383.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35262 : 702.0) no description available & (gnl|cdd|71844 : 173.0) no description available & (reliability: 2766.0) & (original description: Putative RBOHA, Description = Respiratory burst oxidase homolog protein A, PFAM = PF08030;PF08414;PF01794;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold52776_1480-13951' '(at1g19230 : 140.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|71844 : 94.1) no description available & (reliability: 280.0) & (original description: Putative RBOHA, Description = Os09g0438000 protein, PFAM = PF08414)' T
'20.1.1' 'stress.biotic.respiratory burst' 'nbv0.5scaffold6356_85817-95062' '(at1g19230 : 1154.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 629.0) no description available & (gnl|cdd|87433 : 161.0) no description available & (reliability: 2308.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF01794;PF08030;PF08414;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00002072ctg016_7185-12336' '(at1g64060 : 350.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|71844 : 164.0) no description available & (gnl|cdd|35262 : 87.7) no description available & (reliability: 700.0) & (original description: Putative rboh1, Description = Respiratory burst oxidase-like protein, PFAM = PF08414)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00017995ctg021_14677-24084' '(at1g19230 : 1062.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 622.0) no description available & (gnl|cdd|87433 : 166.0) no description available & (reliability: 2124.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF08022;PF08414;PF08030;PF01794)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00035718ctg003_3635-13400' '(at1g19230 : 1177.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 647.0) no description available & (gnl|cdd|87433 : 173.0) no description available & (reliability: 2354.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF01794;PF08414;PF08022;PF08030)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf00482_339914-360750' '(at5g60010 : 1011.0) ferric reductase-like transmembrane component family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: ferric reductase-like transmembrane component family protein (TAIR:AT3G45810.1); Has 1927 Blast hits to 1788 proteins in 283 species: Archae - 0; Bacteria - 154; Metazoa - 723; Fungi - 353; Plants - 523; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|35262 : 616.0) no description available & (gnl|cdd|87433 : 170.0) no description available & (reliability: 2022.0) & (original description: Putative RBOHH, Description = Putative respiratory burst oxidase homolog protein H, PFAM = PF01794;PF08414;PF08030;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf01596_1170232-1179438' '(at5g51060 : 408.0) RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx.; ROOT HAIR DEFECTIVE 2 (RHD2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G25090.1); Has 2388 Blast hits to 2271 proteins in 341 species: Archae - 10; Bacteria - 214; Metazoa - 694; Fungi - 757; Plants - 530; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35262 : 296.0) no description available & (gnl|cdd|87433 : 167.0) no description available & (reliability: 816.0) & (original description: Putative rboh, Description = Respiratory burst oxidase-like protein D, PFAM = PF08022;PF08030)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf02437_605563-614138' '(at1g19230 : 1135.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 626.0) no description available & (gnl|cdd|87433 : 171.0) no description available & (reliability: 2270.0) & (original description: Putative rboh, Description = Respiratory burst oxidase-like protein, PFAM = PF08030;PF01794;PF08022;PF08414)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf02581_423372-432157' '(at5g47910 : 1286.0) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase homologue D (RBOHD); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, defense response to fungus, response to heat, defense response, negative regulation of programmed cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35262 : 712.0) no description available & (gnl|cdd|71844 : 172.0) no description available & (reliability: 2572.0) & (original description: Putative RBOHC, Description = Respiratory burst oxidase homolog protein C, PFAM = PF08414;PF08030;PF01794;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf05682_24175-33775' '(at1g19230 : 1174.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 648.0) no description available & (gnl|cdd|87433 : 172.0) no description available & (reliability: 2348.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF08022;PF08414;PF01794;PF08030)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf05682_24181-33216' '(at1g19230 : 1111.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 599.0) no description available & (gnl|cdd|71844 : 150.0) no description available & (reliability: 2222.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF13202;PF01794;PF08030;PF08414;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf07345_42127-50489' '(at5g47910 : 1291.0) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase homologue D (RBOHD); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, defense response to fungus, response to heat, defense response, negative regulation of programmed cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35262 : 714.0) no description available & (gnl|cdd|71844 : 170.0) no description available & (reliability: 2582.0) & (original description: Putative RBOHC, Description = Respiratory burst oxidase homolog protein C, PFAM = PF08030;PF01794;PF08414;PF08022)' T
'20.1.1' 'stress.biotic.respiratory burst' 'niben101scf10840_207322-233039' '(at1g64060 : 1389.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35262 : 699.0) no description available & (gnl|cdd|71844 : 175.0) no description available & (reliability: 2778.0) & (original description: Putative RBOHA, Description = Respiratory burst oxidase homolog protein A, PFAM = PF01794;PF08414;PF08022;PF08030)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold15664_27828-30905' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 110.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold36705_16541-19542' '(at5g17680 : 158.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 131.0) no description available & (reliability: 296.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold94495_1988-4406' '(at1g27180 : 90.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (gnl|cdd|85544 : 80.7) no description available & (reliability: 179.4) & (original description: Putative muRdr1B, Description = TMV resistance protein N, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold2695_296103-310299' '(at1g27170 : 372.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|85132 : 157.0) no description available & (gnl|cdd|39857 : 124.0) no description available & (reliability: 744.0) & (original description: Putative NLR4, Description = TMV resistance protein N, PFAM = PF00931;PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold3511_15576-21770' '(at5g17680 : 403.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 127.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 756.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF00931;PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold3511_15588-21296' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 126.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 738.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00014844ctg020_3538-5969' '(at5g17680 : 95.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 86.6) no description available & (reliability: 184.8) & (original description: Putative HD17, Description = TIR-NBS type disease resistance protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00015188ctg000_23841-26313' '(at5g17680 : 110.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 96.6) no description available & (reliability: 216.0) & (original description: Putative CN, Description = TMV resistance protein N, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00021168ctg005_2643-5352' '(at5g48770 : 200.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G72840.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 124.0) no description available & (reliability: 394.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00021476ctg004_8022-10128' '(at4g12010 : 93.6) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00025611ctg002_3035-6492' '(at1g27180 : 255.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At1g27170, Description = Disease resistance protein (TIR-NBS-LRR class), putative, PFAM = )' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00030171ctg011_5117-8241' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 109.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben044scf00042921ctg000_1-2002' '(at1g27170 : 101.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf00269_2191-8376' '(at5g36930 : 469.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 150.0) no description available & (gnl|cdd|85544 : 128.0) no description available & (reliability: 862.0) & (original description: Putative PGSC0003DMG400020935, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931;PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf00269_2665-8415' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 126.0) no description available & (gnl|cdd|39857 : 125.0) no description available & (reliability: 740.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF01582;PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf00269_124273-126757' '(at1g27170 : 103.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf00269_124716-125811' '(at4g12010 : 95.1) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative NBS1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf04191_516038-534940' '(at1g27170 : 1033.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|39857 : 143.0) no description available & (gnl|cdd|85132 : 135.0) no description available & (reliability: 2066.0) & (original description: Putative NBS162, Description = NBS-coding resistance gene analog, PFAM = PF01582;PF00931)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 294.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf06848_670783-673860' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 108.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.2' 'stress.biotic.receptors' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 222.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T
'20.1.3' 'stress.biotic.signalling' 'nbv0.3scaffold36634_4334-8058' '(at1g19180 : 129.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SlSRG1, Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T
'20.1.3' 'stress.biotic.signalling' 'niben044scf00015551ctg010_5121-10099' '(at3g48090 : 426.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative EDS1B, Description = Protein EDS1B, PFAM = PF01764)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf00298_88653-92313' '(at1g19180 : 124.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TIFY10A, Description = Protein TIFY 10A, PFAM = PF06200;PF09425)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf03069_38248-43367' '(at5g51700 : 272.0) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.; PPHB SUSCEPTIBLE 2 (PBS2); CONTAINS InterPro DOMAIN/s: Cysteine/histidine-rich domain (InterPro:IPR007051); Has 933 Blast hits to 477 proteins in 168 species: Archae - 0; Bacteria - 18; Metazoa - 449; Fungi - 191; Plants - 188; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36880 : 131.0) no description available & (gnl|cdd|68539 : 94.6) no description available & (reliability: 544.0) & (original description: Putative RAR1, Description = Cysteine and histidine-rich domain-containing protein RAR1, PFAM = PF04968;PF04968)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf05529_15403-36263' '(at4g37460 : 1291.0) Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity.; SUPPRESSOR OF RPS4-RLD 1 (SRFR1); FUNCTIONS IN: protein complex scaffold; INVOLVED IN: defense response to bacterium, incompatible interaction, defense response to bacterium, negative regulation of transcription, negative regulation of defense response; LOCATED IN: nucleus, perinuclear region of cytoplasm, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39826 : 90.9) no description available & (reliability: 2582.0) & (original description: Putative SRFR1, Description = Suppressor of RPS4-RLD 1, PFAM = PF13176;PF13181;PF13181;PF13432)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf06720_216736-221502' '(at3g48080 : 434.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative EDS1, Description = Protein EDS1, PFAM = PF01764)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf07532_95264-100234' '(at5g51700 : 281.0) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.; PPHB SUSCEPTIBLE 2 (PBS2); CONTAINS InterPro DOMAIN/s: Cysteine/histidine-rich domain (InterPro:IPR007051); Has 933 Blast hits to 477 proteins in 168 species: Archae - 0; Bacteria - 18; Metazoa - 449; Fungi - 191; Plants - 188; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36880 : 136.0) no description available & (gnl|cdd|68539 : 95.4) no description available & (reliability: 562.0) & (original description: Putative RAR1, Description = Cysteine and histidine-rich domain-containing protein RAR1, PFAM = PF04968;PF04968)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf16657_78927-81633' '(at1g19180 : 132.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative JAZ1, Description = BnaA09g44300D protein, PFAM = PF06200;PF09425)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf18667_114122-116814' '(at3g18690 : 84.0) Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators.; MAP kinase substrate 1 (MKS1); CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G21326.1); Has 153 Blast hits to 153 proteins in 16 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative MKS1, Description = Protein MKS1, PFAM = PF05678)' T
'20.1.3' 'stress.biotic.signalling' 'niben101scf34602_3082-6794' '(at1g19180 : 133.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.3scaffold24123_5269-22545' '(gnl|cdd|66748 : 331.0) no description available & (at3g45290 : 330.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 3 (MLO3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G39200.1); Has 534 Blast hits to 527 proteins in 60 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o49873|mloh1_horvu : 266.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 660.0) & (original description: Putative mlo2, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.3scaffold27418_1289-10726' '(gnl|cdd|66748 : 428.0) no description available & (at1g11000 : 427.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 260.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 854.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094;PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold1756_132878-142315' '(gnl|cdd|66748 : 284.0) no description available & (at1g11000 : 283.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (o49914|mloh1_orysa : 192.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 566.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094;PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold2789_186260-193428' '(gnl|cdd|66748 : 435.0) no description available & (at1g61560 : 415.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 311.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 830.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold9738_3183-14626' '(gnl|cdd|66748 : 440.0) no description available & (at1g11000 : 429.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 268.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 858.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00013098ctg000_1-7639' '(at1g61560 : 611.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (gnl|cdd|66748 : 598.0) no description available & (o49873|mloh1_horvu : 416.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1222.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00029318ctg000_532-8143' '(gnl|cdd|66748 : 568.0) no description available & (at4g02600 : 556.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93766|mlo_horvu : 302.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1112.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094;PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00034956ctg004_2470-9788' '(gnl|cdd|66748 : 694.0) no description available & (at2g39200 : 660.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 12 (MLO12); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cyclopentenone, leaf senescence, cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1); Has 552 Blast hits to 537 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 545; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (o49914|mloh1_orysa : 458.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1320.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00381_562120-570643' '(gnl|cdd|66748 : 693.0) no description available & (at2g17480 : 682.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 8 (MLO8); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G65970.1); Has 544 Blast hits to 526 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (o49873|mloh1_horvu : 476.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1364.0) & (original description: Putative MLO8, Description = MLO-like protein 8, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00406_591119-598687' '(at1g61560 : 644.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (gnl|cdd|66748 : 628.0) no description available & (o49873|mloh1_horvu : 440.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1288.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00777_98347-112204' '(gnl|cdd|66748 : 653.0) no description available & (at2g33670 : 563.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 443.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1126.0) & (original description: Putative MLO5, Description = MLO-like protein 5, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf01513_48286-55897' '(gnl|cdd|66748 : 640.0) no description available & (at4g02600 : 630.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49914|mloh1_orysa : 350.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1260.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf01993_922157-929580' '(at1g11000 : 679.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66748 : 536.0) no description available & (o49873|mloh1_horvu : 254.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1358.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf02560_31054-43683' '(at5g53760 : 719.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 11 (MLO11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G26700.1); Has 534 Blast hits to 523 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|66748 : 497.0) no description available & (p93766|mlo_horvu : 264.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1438.0) & (original description: Putative MLO11, Description = MLO-like protein 11, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf02837_479405-482520' '(gnl|cdd|66748 : 145.0) no description available & (at4g02600 : 142.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49873|mloh1_horvu : 91.7) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 284.0) & (original description: Putative mlo8, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf03292_320751-329900' '(gnl|cdd|66748 : 699.0) no description available & (at1g61560 : 697.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 467.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1394.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04481_111933-118154' '(gnl|cdd|66748 : 585.0) no description available & (at4g24250 : 473.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO13 belongs to the clade II, with ATMLO1 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and also in placenta of developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 13 (MLO13); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT4G02600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49914|mloh1_orysa : 343.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative MLO13, Description = MLO-like protein 13, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04663_257518-260184' '(gnl|cdd|66748 : 139.0) no description available & (at2g33670 : 135.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 97.1) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 270.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04663_257991-262338' '(gnl|cdd|66748 : 347.0) no description available & (at2g33670 : 319.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 244.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 638.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf06856_149269-160525' '(gnl|cdd|66748 : 442.0) no description available & (at1g11000 : 441.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 272.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 882.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07008_309646-317866' '(gnl|cdd|66748 : 615.0) no description available & (at4g02600 : 573.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49873|mloh1_horvu : 326.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1146.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07024_13222-21848' '(gnl|cdd|66748 : 607.0) no description available & (at4g02600 : 593.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49914|mloh1_orysa : 325.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07027_500289-508886' '(gnl|cdd|66748 : 702.0) no description available & (at2g17480 : 663.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 8 (MLO8); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G65970.1); Has 544 Blast hits to 526 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93766|mlo_horvu : 444.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1326.0) & (original description: Putative MLO8, Description = MLO-like protein 8, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_91923-125951' '(gnl|cdd|66748 : 356.0) no description available & (at1g61560 : 334.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (p93766|mlo_horvu : 196.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 668.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_92700-130217' '(gnl|cdd|66748 : 686.0) no description available & (at1g61560 : 665.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49914|mloh1_orysa : 445.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1330.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_230543-250978' '(gnl|cdd|66748 : 547.0) no description available & (at3g45290 : 513.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 3 (MLO3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G39200.1); Has 534 Blast hits to 527 proteins in 60 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o49873|mloh1_horvu : 411.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1026.0) & (original description: Putative MLO3, Description = MLO-like protein 3, PFAM = PF03094)' T
'20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf21242_20065-27383' '(gnl|cdd|66748 : 709.0) no description available & (at1g61560 : 687.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 468.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1374.0) & (original description: Putative MLO12, Description = MLO-like protein 12, PFAM = PF03094)' T
'20.1.4' 'stress.biotic.kinases' 'nbv0.5scaffold1194_141492-146299' '(at3g05660 : 362.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 185.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 724.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855;PF13855;PF13855;PF08263)' T
'20.1.4' 'stress.biotic.kinases' 'nbv0.5scaffold1194_204190-208970' '(at3g05660 : 355.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 189.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 710.0) & (original description: Putative vdr3, Description = Verticillium wilt resistance-like protein, PFAM = PF00560;PF00560;PF13855;PF13855;PF13855;PF08263)' T
'20.1.4' 'stress.biotic.kinases' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 374.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T
'20.1.4' 'stress.biotic.kinases' 'niben101scf00963_160541-165348' '(at4g13920 : 322.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 176.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 622.0) & (original description: Putative Ve1, Description = Verticillium wilt disease resistance protein, PFAM = PF13855;PF13855;PF13855;PF08263)' T
'20.1.4' 'stress.biotic.kinases' 'niben101scf01119_193328-195239' '(at3g11010 : 189.0) receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 358.0) & (original description: Putative glysoja_038557, Description = Receptor-like protein 12, PFAM = PF13855)' T
'20.1.4' 'stress.biotic.kinases' 'niben101scf03925_203933-207326' '(at3g05660 : 88.2) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative Eix1, Description = EIX receptor 1, PFAM = PF00560;PF13855;PF08263)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben044scf00023308ctg001_5759-8889' '(gnl|cdd|66760 : 103.0) no description available & (at2g34830 : 84.3) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative WRKY5, Description = WRKY 5 transcription factor, PFAM = PF03106)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf00493_26910-32432' '(at1g54130 : 906.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 675.0) no description available & (gnl|cdd|30665 : 412.0) no description available & (reliability: 1812.0) & (original description: Putative relA, Description = RelA homolog, PFAM = PF13328;PF04607)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf01063_784781-794862' '(gnl|cdd|30665 : 190.0) no description available & (at1g54130 : 174.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 140.0) no description available & (reliability: 348.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF04607;PF13328;PF02824)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf02499_257663-260403' '(at5g56270 : 113.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 216.0) & (original description: Putative WRKY79, Description = WRKY transcription factor, PFAM = PF03106)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf02749_335867-341584' '(at1g54130 : 900.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 680.0) no description available & (gnl|cdd|30665 : 415.0) no description available & (reliability: 1800.0) & (original description: Putative relA, Description = RelA homolog, PFAM = PF04607;PF13328)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf03341_305526-327697' '(gnl|cdd|30665 : 189.0) no description available & (at1g54130 : 176.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 141.0) no description available & (reliability: 352.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF13328;PF04607;PF02824)' T
'20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf04000_238011-241132' '(gnl|cdd|66760 : 102.0) no description available & (at2g34830 : 83.2) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative WRKY65, Description = WRKY transcription factor 65, PFAM = PF03106)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold4045_1-5209' '(gnl|cdd|39857 : 342.0) no description available & (at1g53350 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 245.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold8423_1689-4210' '(p11670|prb1_tobac : 350.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 203.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 155.0) no description available & (gnl|cdd|38227 : 123.0) no description available & (reliability: 396.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold9634_34156-36725' '(at1g65870 : 194.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 388.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold9878_38339-48688' '(at5g36930 : 340.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 123.0) no description available & (gnl|cdd|39857 : 98.1) no description available & (reliability: 680.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold15664_27828-30905' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 110.0) no description available & (reliability: 274.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold23510_4986-9267' '(gnl|cdd|39857 : 259.0) no description available & (gnl|cdd|85132 : 177.0) no description available & (at1g50180 : 169.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400004873, Description = NBS-LRR class resistance protein Fy12-Ry1, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold24704_1-29236' '(at5g17680 : 471.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 127.0) no description available & (gnl|cdd|39857 : 108.0) no description available & (reliability: 942.0) & (original description: Putative HD8, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold28669_1853-8694' '(gnl|cdd|39857 : 284.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (at3g46530 : 218.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold36705_16541-19542' '(at5g17680 : 158.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 131.0) no description available & (reliability: 316.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold40882_1-3089' '(p29060|chia_tobac : 456.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 313.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 255.0) no description available & (gnl|cdd|84965 : 100.0) no description available & (reliability: 626.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold64516_1-3648' '(gnl|cdd|39857 : 202.0) no description available & (gnl|cdd|85132 : 195.0) no description available & (at1g53350 : 161.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold82183_1-4645' '(gnl|cdd|39857 : 291.0) no description available & (gnl|cdd|85132 : 240.0) no description available & (at1g50180 : 231.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold84765_1-2913' '(gnl|cdd|39857 : 274.0) no description available & (gnl|cdd|85132 : 230.0) no description available & (at3g07040 : 210.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold94495_1988-4406' '(at1g27180 : 90.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (gnl|cdd|85544 : 80.7) no description available & (reliability: 181.8) & (original description: Putative muRdr1B, Description = TMV resistance protein N, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold83_724911-728026' '(at1g07730 : 223.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 446.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold191_21707-27143' '(at1g47890 : 392.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 197.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 123.0) no description available & (reliability: 784.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold467_912576-919487' '(at2g34930 : 296.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 164.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 106.0) no description available & (reliability: 592.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF00560;PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold665_374347-430871' '(at1g58170 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 138.0) no description available & (reliability: 314.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold841_570863-596941' '(p29060|chia_tobac : 402.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 263.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 212.0) no description available & (reliability: 526.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1064_274119-278114' '(gnl|cdd|39857 : 232.0) no description available & (gnl|cdd|85132 : 215.0) no description available & (at3g46530 : 179.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative R1, Description = R1, PFAM = PF12061;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1194_141492-146299' '(at3g05660 : 362.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 185.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 724.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1194_204190-208970' '(at3g05660 : 355.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 189.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 704.0) & (original description: Putative vdr3, Description = Verticillium wilt resistance-like protein, PFAM = PF00560;PF00560;PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1207_277143-285314' '(gnl|cdd|39857 : 251.0) no description available & (at3g14470 : 235.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|85132 : 155.0) no description available & (reliability: 470.0) & (original description: Putative MtrDRAFT_AC155880g13v2, Description = Disease resistance protein, PFAM = PF00931;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1313_337009-342854' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 247.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF13499;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3234_98696-108045' '(at5g17680 : 555.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 179.0) no description available & (gnl|cdd|85132 : 144.0) no description available & (reliability: 1110.0) & (original description: Putative nl27, Description = NL27, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3511_15576-21770' '(at5g17680 : 403.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 127.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 806.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3511_15588-21296' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 126.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 756.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 284.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold4024_57052-63156' '(gnl|cdd|39857 : 262.0) no description available & (at5g35450 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 416.0) & (original description: Putative RGA88, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold6136_104599-109033' '(at4g23440 : 655.0) Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G56220.1); Has 636 Blast hits to 617 proteins in 139 species: Archae - 3; Bacteria - 309; Metazoa - 6; Fungi - 123; Plants - 176; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative At4g23440, Description = Disease resistance protein (TIR-NBS class), PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold7331_5906-23942' '(at5g35450 : 193.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold9200_1600-14766' '(gnl|cdd|39857 : 303.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 198.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931;PF01419;PF01419;PF01419)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044ctg26216047_1594-4718' '(at1g07730 : 220.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 440.0) & (original description: Putative DIR9, Description = Disease resistance-responsive family protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00000307ctg000_3233-5784' '(p07053|pr1b_tobac : 322.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 192.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 160.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 384.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00001169ctg048_1-2133' '(at3g46730 : 162.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|39857 : 153.0) no description available & (reliability: 324.0) & (original description: Putative PGSC0003DMG400006531, Description = Disease resistance protein RPP8, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00001621ctg000_1-5099' '(at5g17680 : 527.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 135.0) no description available & (gnl|cdd|39857 : 106.0) no description available & (reliability: 1054.0) & (original description: Putative nl27, Description = NL27, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00002905ctg007_11371-16001' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00002927ctg008_1925-8541' '(p51614|chit3_vitvi : 394.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (at5g24090 : 393.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 334.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 786.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF07714;PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00003205ctg010_7639-10661' '(at3g14470 : 118.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative I2, Description = Disease resistance protein R3a-like protein, PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 244.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004418ctg003_8278-11985' '(at3g24020 : 280.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 560.0) & (original description: Putative DIR16, Description = Dirigent protein 16, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004802ctg003_1-3129' '(gnl|cdd|39857 : 185.0) no description available & (gnl|cdd|85132 : 178.0) no description available & (at3g07040 : 166.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00005464ctg007_6316-10179' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at1g50180 : 207.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BS2, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00005464ctg007_7864-10436' '(gnl|cdd|85132 : 259.0) no description available & (gnl|cdd|39857 : 249.0) no description available & (at1g50180 : 188.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00006274ctg015_1-4294' '(gnl|cdd|39857 : 287.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g59218 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58848.2). & (reliability: 416.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00008770ctg004_1401-3888' '(at5g17680 : 178.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 136.0) no description available & (reliability: 356.0) & (original description: Putative HD22, Description = HD domain class transcription factor, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00009821ctg009_1-1823' '(at5g17680 : 171.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 125.0) no description available & (reliability: 342.0) & (original description: Putative NBS1, Description = TIR-NBS-LRR type disease resistance protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00009911ctg013_2363-8388' '(at3g14470 : 568.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 340.0) no description available & (gnl|cdd|85132 : 317.0) no description available & (reliability: 1136.0) & (original description: Putative N', Description = N' tobamovirus resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00010763ctg010_14428-17748' '(at1g65870 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 142.0) no description available & (reliability: 314.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00012189ctg010_702-2599' '(at3g14470 : 139.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|85132 : 103.0) no description available & (gnl|cdd|39857 : 102.0) no description available & (reliability: 278.0) & (original description: Putative I2, Description = I2, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00014844ctg020_3538-5969' '(at5g17680 : 95.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 86.6) no description available & (reliability: 191.8) & (original description: Putative HD17, Description = TIR-NBS type disease resistance protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00015188ctg000_23841-26313' '(at5g17680 : 110.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 96.6) no description available & (reliability: 220.0) & (original description: Putative CN, Description = TMV resistance protein N, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00016110ctg008_1-2168' '(p29061|chib_tobac : 311.0) Basic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 176.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 158.0) no description available & (reliability: 352.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00016992ctg005_172-4778' '(gnl|cdd|39857 : 143.0) no description available & (at1g50180 : 132.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 99.0) no description available & (reliability: 264.0) & (original description: Putative CN, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00018239ctg001_2702-10661' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 200.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00018802ctg003_4920-10401' '(at1g47890 : 388.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 112.0) no description available & (reliability: 776.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF08263;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019156ctg002_343-2100' '(at2g15080 : 95.5) receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 148753 Blast hits to 34404 proteins in 1310 species: Archae - 57; Bacteria - 11889; Metazoa - 32225; Fungi - 1644; Plants - 90370; Viruses - 42; Other Eukaryotes - 12526 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13516;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019248ctg004_1-873' '(gnl|cdd|85132 : 179.0) no description available & (gnl|cdd|39857 : 145.0) no description available & (at1g50180 : 133.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400020740, Description = NBS-coding resistance protein-like protein RGA11, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019530ctg009_1-5071' '(at2g34930 : 280.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 108.0) no description available & (reliability: 560.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855;PF13855;PF00560;PF08263;PF13516)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021168ctg005_2643-5352' '(at5g48770 : 200.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G72840.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 124.0) no description available & (reliability: 400.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021476ctg004_3710-10502' '(at5g36930 : 558.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 165.0) no description available & (gnl|cdd|85544 : 132.0) no description available & (reliability: 1116.0) & (original description: Putative glysoja_000381, Description = TMV resistance protein N, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021476ctg004_8022-10128' '(at4g12010 : 93.6) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021599ctg011_2429-7299' '(at4g04900 : 85.9) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00023299ctg001_10924-15008' '(gnl|cdd|39857 : 145.0) no description available & (at3g46730 : 103.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 86.9) no description available & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00024406ctg001_14887-19582' '(gnl|cdd|39857 : 276.0) no description available & (gnl|cdd|85132 : 253.0) no description available & (at3g50950 : 208.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00024857ctg001_1137-6480' '(gnl|cdd|39857 : 417.0) no description available & (at3g46530 : 412.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 253.0) no description available & (reliability: 800.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00025611ctg002_3035-6492' '(at1g27180 : 255.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g27170, Description = Disease resistance protein (TIR-NBS-LRR class), putative, PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00026128ctg004_1139-6034' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00026706ctg004_1404-7473' '(gnl|cdd|39857 : 344.0) no description available & (at5g35450 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 243.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00028827ctg001_10315-15546' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (at3g46530 : 230.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400005170, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00030171ctg011_5117-8241' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 109.0) no description available & (reliability: 274.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00032590ctg000_713-2472' '(at1g74190 : 112.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 89.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 212.0) & (original description: Putative Eix1, Description = Receptor-like protein, PFAM = PF13516;PF12799;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00040944ctg007_2406-7951' '(at5g35450 : 192.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 384.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00042921ctg000_1-2002' '(at1g27170 : 101.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00043361ctg000_1-3295' '(at1g69550 : 117.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400024055, Description = , PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00045592ctg002_1-3970' '(gnl|cdd|39857 : 386.0) no description available & (at1g50180 : 377.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 260.0) no description available & (reliability: 754.0) & (original description: Putative PGSC0003DMG400008306, Description = NBS resistance protein RGA50, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00049206ctg001_1-2476' '(at1g07730 : 232.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 464.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00049718ctg002_2328-4997' '(at2g39430 : 215.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 430.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00053594ctg002_1-2876' '(at3g47090 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 158.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 83.2) no description available & (reliability: 344.0) & (original description: Putative TCM_031965, Description = Serine-threonine protein kinase, PFAM = PF00560;PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00152_619451-622015' '(at4g36180 : 87.4) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative At1g25320, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_2191-8376' '(at5g36930 : 469.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 150.0) no description available & (gnl|cdd|85544 : 128.0) no description available & (reliability: 938.0) & (original description: Putative PGSC0003DMG400020935, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_2665-8415' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 126.0) no description available & (gnl|cdd|39857 : 125.0) no description available & (reliability: 756.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_63181-129482' '(at5g36930 : 372.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 132.0) no description available & (gnl|cdd|85544 : 129.0) no description available & (reliability: 744.0) & (original description: Putative PGSC0003DMG400007743, Description = Putative TMV resistance protein N-like, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_124273-126757' '(at1g27170 : 103.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_124716-125811' '(at4g12010 : 95.1) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative NBS1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00447_16764-19663' '(p23472|chly_hevbr : 349.0) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)] - Hevea brasiliensis (Para rubber tree) & (at5g24090 : 345.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 282.0) no description available & (gnl|cdd|84965 : 98.3) no description available & (reliability: 690.0) & (original description: Putative chi3, Description = Chitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00448_1874138-1876662' '(gnl|cdd|66675 : 105.0) no description available & (at2g21100 : 103.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative TCM_028979, Description = Disease resistance-responsive family protein, putative, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00449_92995-96125' '(at2g39430 : 246.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 127.0) no description available & (reliability: 492.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00528_151185-154976' '(gnl|cdd|47535 : 256.0) no description available & (at1g18250 : 225.0) encodes a thaumatin-like protein; ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p83332|tlp1_prupe : 208.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 444.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00612_144827-148441' '(at3g24020 : 279.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 128.0) no description available & (reliability: 558.0) & (original description: Putative DIR16, Description = Dirigent protein 16, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00650_231412-238911' '(gnl|cdd|85132 : 311.0) no description available & (gnl|cdd|39857 : 290.0) no description available & (at1g59780 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061;PF12061)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00705_312867-324661' '(at5g36930 : 461.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 146.0) no description available & (gnl|cdd|85132 : 136.0) no description available & (reliability: 922.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00705_313215-321986' '(at5g36930 : 227.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 133.0) no description available & (gnl|cdd|39857 : 110.0) no description available & (reliability: 454.0) & (original description: Putative HD20, Description = TMV resistance protein N, putative, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00761_645774-655160' '(gnl|cdd|39857 : 306.0) no description available & (at1g53350 : 243.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 235.0) no description available & (reliability: 486.0) & (original description: Putative PGSC0003DMG400013486, Description = Disease resistance protein, putative, PFAM = PF00931;PF12061;PF12061)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00781_697373-701439' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at1g50180 : 224.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative rx, Description = Disease resistance protein RGH5, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00781_699033-701850' '(gnl|cdd|85132 : 259.0) no description available & (gnl|cdd|39857 : 246.0) no description available & (at1g50180 : 192.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative rx, Description = Disease resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00883_1597166-1599750' '(at2g21100 : 144.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 288.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_300641-303196' '(p11670|prb1_tobac : 288.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 184.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 116.0) no description available & (reliability: 366.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_315511-318632' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 199.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 165.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 392.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_542627-545115' '(p11670|prb1_tobac : 205.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at1g50060 : 186.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT1G50050.1); Has 2790 Blast hits to 2723 proteins in 351 species: Archae - 0; Bacteria - 60; Metazoa - 1420; Fungi - 326; Plants - 897; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 110.0) no description available & (reliability: 370.0) & (original description: Putative PR1B1, Description = Pathogenesis-related leaf protein 6, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_160541-165348' '(at4g13920 : 322.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 176.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 644.0) & (original description: Putative Ve1, Description = Verticillium wilt disease resistance protein, PFAM = PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_248745-252283' '(at4g13920 : 193.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 141.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 90.1) no description available & (reliability: 386.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_250566-253552' '(at5g40170 : 186.0) receptor like protein 54 (RLP54); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 95502 Blast hits to 27133 proteins in 1050 species: Archae - 52; Bacteria - 4975; Metazoa - 18576; Fungi - 1120; Plants - 63605; Viruses - 17; Other Eukaryotes - 7157 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 106.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 372.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00975_98677-103769' '(at2g34930 : 396.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 212.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 122.0) no description available & (reliability: 792.0) & (original description: Putative Eix2, Description = EIX receptor 2, PFAM = PF13516;PF13516;PF00560;PF00560;PF00560;PF08263;PF13855;PF13855;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_394038-403963' '(at4g14368 : 1196.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT3G23270.1); Has 23075 Blast hits to 9219 proteins in 606 species: Archae - 56; Bacteria - 2851; Metazoa - 9367; Fungi - 1087; Plants - 2969; Viruses - 60; Other Eukaryotes - 6685 (source: NCBI BLink). & (gnl|cdd|34783 : 133.0) no description available & (gnl|cdd|36640 : 111.0) no description available & (reliability: 2392.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF16457;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_734995-802431' '(gnl|cdd|39857 : 106.0) no description available & (gnl|cdd|85132 : 105.0) no description available & (at3g46530 : 97.8) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_796881-800452' '(at1g58390 : 194.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39857 : 188.0) no description available & (reliability: 388.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_838054-845165' '(gnl|cdd|39857 : 343.0) no description available & (gnl|cdd|85132 : 251.0) no description available & (at1g53350 : 247.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative PGSC0003DMG400007462, Description = NBS-LRR class resistance protein Fy2-Ry2, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01017_610120-615953' '(at1g53350 : 518.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|39857 : 497.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (reliability: 1036.0) & (original description: Putative PGSC0003DMG400029344, Description = Disease resistance protein RPP13, putative, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01119_193328-195239' '(at3g11010 : 189.0) receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 378.0) & (original description: Putative glysoja_038557, Description = Receptor-like protein 12, PFAM = PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01145_13490-18180' '(gnl|cdd|39857 : 324.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at5g43470 : 246.0) Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.; RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8); FUNCTIONS IN: nucleotide binding; INVOLVED IN: defense response to virus, response to light stimulus, response to other organism, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG400018462, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01214_313614-318333' '(gnl|cdd|39857 : 299.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g58390 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01240_318263-322994' '(gnl|cdd|39857 : 320.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at1g50180 : 252.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01334_672768-676756' '(at3g17210 : 149.0) Encodes a heat stable protein with antimicrobial and antifungal activity.; heat stable protein 1 (HS1); INVOLVED IN: defense response to fungus, defense response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive A/B Barrel Domain (TAIR:AT5G22580.1); Has 431 Blast hits to 430 proteins in 120 species: Archae - 0; Bacteria - 167; Metazoa - 0; Fungi - 40; Plants - 173; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|87390 : 95.8) no description available & (reliability: 298.0) & (original description: Putative HS1, Description = Stress-response A/B barrel domain-containing protein HS1, PFAM = PF07876)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01398_90211-94931' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 259.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01466_180275-185432' '(gnl|cdd|39857 : 137.0) no description available & (at3g07040 : 115.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 115.0) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400006316, Description = Disease resistance protein RPM1, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01495_263733-266274' '(at1g07730 : 232.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 464.0) & (original description: Putative DIR24, Description = Dirigent protein 24, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01739_369649-373755' '(at2g34930 : 332.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 216.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 98.5) no description available & (reliability: 664.0) & (original description: Putative PVf1, Description = Receptor-like protein, PFAM = PF00560;PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01831_163236-166545' '(q9fsg7|tp1a_maldo : 259.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 241.0) no description available & (at4g38670 : 236.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative TL1, Description = Thaumatin-like protein 1a, PFAM = PF00314)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01917_397611-400630' '(at1g33590 : 132.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, response to karrikin, defense response; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33600.1); Has 74647 Blast hits to 28620 proteins in 1034 species: Archae - 16; Bacteria - 6743; Metazoa - 19007; Fungi - 704; Plants - 43140; Viruses - 2; Other Eukaryotes - 5035 (source: NCBI BLink). & (gnl|cdd|35665 : 105.0) no description available & (p93194|rpk1_iponi : 93.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 264.0) & (original description: Putative Shy, Description = Leucine rich repeat protein, PFAM = PF13855;PF00560;PF00560;PF00560;PF00560;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01934_514657-518146' '(gnl|cdd|66675 : 124.0) no description available & (at1g22900 : 115.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative Ccrd_007776, Description = Plant disease resistance response protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01986_36542-41318' '(at2g34930 : 433.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 213.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 125.0) no description available & (reliability: 866.0) & (original description: Putative MTR_4g040360, Description = LRR receptor-like kinase family protein, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01986_36555-41697' '(at2g34930 : 434.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 213.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 125.0) no description available & (reliability: 868.0) & (original description: Putative TCM_025511, Description = Disease resistance family protein / LRR family protein, putative, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01990_1359-4990' '(p29060|chia_tobac : 400.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 268.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 215.0) no description available & (reliability: 536.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01999_720022-722561' '(p07053|pr1b_tobac : 300.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 190.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 148.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 362.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02057_248617-261383' '(gnl|cdd|39857 : 296.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at5g35450 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative , Description = NBS resistance protein RGA40, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02118_108029-114520' '(at5g66900 : 453.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 144.0) no description available & (gnl|cdd|85132 : 119.0) no description available & (reliability: 906.0) & (original description: Putative NRG1, Description = NRG1, PFAM = PF00931;PF05659)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02133_55542-62165' '(gnl|cdd|39857 : 328.0) no description available & (at1g53350 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 232.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02168_181187-186678' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 233.0) no description available & (at1g59780 : 221.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF12061;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 248.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02248_86863-93919' '(gnl|cdd|39857 : 307.0) no description available & (at1g53350 : 267.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 534.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02272_464002-474251' '(at5g17680 : 355.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 122.0) no description available & (gnl|cdd|39857 : 112.0) no description available & (reliability: 710.0) & (original description: Putative nl27, Description = TMV resistance protein N, PFAM = PF00931;PF01582;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02391_18791-22324' '(at1g61105 : 214.0) Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT1G52900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BnaA09g13890D, Description = BnaA09g13890D protein, PFAM = PF13676)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02508_396555-400168' '(at3g24020 : 283.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 131.0) no description available & (reliability: 566.0) & (original description: Putative Sb01g047330, Description = Putative uncharacterized protein Sb01g047330, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02518_177053-189921' '(gnl|cdd|39857 : 180.0) no description available & (at3g07040 : 137.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 82.6) no description available & (reliability: 250.0) & (original description: Putative glysoja_000650, Description = NB-ARC domain disease resistance protein, putative, PFAM = PF00931;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02541_145864-151452' '(at4g04900 : 85.1) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02553_268025-273368' '(gnl|cdd|39857 : 440.0) no description available & (at3g46530 : 432.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 254.0) no description available & (reliability: 834.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02658_140594-143175' '(at1g65870 : 169.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 144.0) no description available & (reliability: 338.0) & (original description: Putative DIR, Description = Dirigent-like protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02658_441824-444405' '(at2g21100 : 187.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 152.0) no description available & (reliability: 374.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02688_107772-112438' '(gnl|cdd|39857 : 338.0) no description available & (at5g35450 : 312.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 221.0) no description available & (reliability: 624.0) & (original description: Putative tm-2, Description = Tm-2 protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02826_140821-145766' '(at2g34930 : 339.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 106.0) no description available & (reliability: 678.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF08263;PF00560;PF00560;PF00560;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02902_95480-101913' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 245.0) no description available & (at3g46530 : 244.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative SW5F, Description = NBS resistance protein RGA34, PFAM = PF12061;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03048_148366-153619' '(gnl|cdd|39857 : 257.0) no description available & (at5g48620 : 229.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 156.0) no description available & (reliability: 458.0) & (original description: Putative , Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03135_29112-33949' '(gnl|cdd|39857 : 286.0) no description available & (at1g58390 : 268.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|85132 : 159.0) no description available & (reliability: 536.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03135_50744-55577' '(gnl|cdd|39857 : 314.0) no description available & (at1g53350 : 258.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 238.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03150_435587-441029' '(gnl|cdd|39857 : 258.0) no description available & (gnl|cdd|85132 : 237.0) no description available & (at1g53350 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03240_79191-83755' '(at2g34930 : 265.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 179.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 105.0) no description available & (reliability: 530.0) & (original description: Putative Eix1, Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03262_60244-64598' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 256.0) no description available & (at3g46530 : 219.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03323_112448-116849' '(at4g04220 : 577.0) receptor like protein 46 (RLP46); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 134299 Blast hits to 33174 proteins in 1147 species: Archae - 55; Bacteria - 10381; Metazoa - 36724; Fungi - 1470; Plants - 75311; Viruses - 4; Other Eukaryotes - 10354 (source: NCBI BLink). & (p93194|rpk1_iponi : 257.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 1154.0) & (original description: Putative RLP46, Description = Receptor like protein 46, PFAM = PF13855;PF13855;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03367_197940-200506' '(at1g58170 : 218.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 436.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03461_520893-525067' '(gnl|cdd|39857 : 261.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at3g46530 : 221.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061;PF12061)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03702_445663-456235' '(gnl|cdd|39857 : 312.0) no description available & (at5g35450 : 262.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 231.0) no description available & (reliability: 524.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03820_224534-227484' '(at1g75040 : 273.0) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.; pathogenesis-related gene 5 (PR5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1613 Blast hits to 1588 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 84; Plants - 1422; Viruses - 4; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 189.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 540.0) & (original description: Putative At1g75040, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03905_164939-167349' '(gnl|cdd|66675 : 99.0) no description available & (at1g22900 : 89.4) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = Disease resistance-responsive, dirigent domain protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03925_116219-121385' '(at2g34930 : 360.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 216.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 122.0) no description available & (reliability: 720.0) & (original description: Putative Eix2, Description = EIX receptor 2, PFAM = PF08263;PF13855;PF13855;PF13855;PF13855;PF00560;PF13516;PF13516)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03925_203933-207326' '(at3g05660 : 88.2) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative Eix1, Description = EIX receptor 1, PFAM = PF00560;PF13855;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03934_455057-462723' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 201.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03959_64470-69140' '(gnl|cdd|39857 : 264.0) no description available & (gnl|cdd|85132 : 216.0) no description available & (at5g35450 : 204.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03987_333831-340785' '(at5g36930 : 600.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 168.0) no description available & (gnl|cdd|85132 : 140.0) no description available & (reliability: 1200.0) & (original description: Putative TCM_020221, Description = Disease resistance protein family, putative, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04053_214372-216908' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 202.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 161.0) no description available & (gnl|cdd|38227 : 121.0) no description available & (reliability: 382.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04053_251966-254283' '(p11670|prb1_tobac : 177.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at2g14610 : 169.0) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.; pathogenesis-related gene 1 (PR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to vitamin B1, response to jasmonic acid stimulus, systemic acquired resistance, defense response; LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3124 Blast hits to 3017 proteins in 378 species: Archae - 0; Bacteria - 64; Metazoa - 1706; Fungi - 335; Plants - 914; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|29108 : 138.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 332.0) & (original description: Putative PR1, Description = Pathogenesis-related protein1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04191_516038-534940' '(at1g27170 : 1033.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|39857 : 143.0) no description available & (gnl|cdd|85132 : 135.0) no description available & (reliability: 1914.0) & (original description: Putative NBS162, Description = NBS-coding resistance gene analog, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04223_215227-217790' '(at2g21100 : 140.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 111.0) no description available & (reliability: 280.0) & (original description: Putative DIR, Description = Plant disease resistance response protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04384_57085-64057' '(at4g27430 : 369.0) Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.; COP1-interacting protein 7 (CIP7); FUNCTIONS IN: transcription activator activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, anthocyanin biosynthetic process; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR class), putative (TAIR:AT1G61100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04403_204534-217531' '(gnl|cdd|85132 : 215.0) no description available & (gnl|cdd|39857 : 207.0) no description available & (at1g50180 : 187.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative RGA86, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04555_264091-270672' '(at5g24090 : 392.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51614|chit3_vitvi : 392.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (gnl|cdd|39899 : 336.0) no description available & (gnl|cdd|47549 : 173.0) no description available & (reliability: 784.0) & (original description: Putative achi, Description = Serine/threonine-protein kinase, PFAM = PF00704;PF07714)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04666_25964-28857' '(p29060|chia_tobac : 362.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 341.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 299.0) no description available & (gnl|cdd|84965 : 106.0) no description available & (reliability: 682.0) & (original description: Putative chi3, Description = Chitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04815_243803-250748' '(at5g36930 : 496.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 152.0) no description available & (gnl|cdd|85132 : 128.0) no description available & (reliability: 992.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04845_128320-135281' '(gnl|cdd|39857 : 273.0) no description available & (at1g50180 : 238.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 230.0) no description available & (reliability: 476.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04963_408635-415677' '(at5g36930 : 476.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 152.0) no description available & (gnl|cdd|39857 : 146.0) no description available & (reliability: 952.0) & (original description: Putative HD20, Description = NBS resistance protein RGA31, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04988_227096-232086' '(at4g23440 : 1183.0) Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G56220.1); Has 636 Blast hits to 617 proteins in 139 species: Archae - 3; Bacteria - 309; Metazoa - 6; Fungi - 123; Plants - 176; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 2366.0) & (original description: Putative BnaC01g15000D, Description = BnaC01g15000D protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05019_3639-6754' '(at1g07730 : 219.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 132.0) no description available & (reliability: 438.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 322.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_309497-337088' '(at5g17680 : 569.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 135.0) no description available & (gnl|cdd|39857 : 116.0) no description available & (reliability: 1138.0) & (original description: Putative nl27, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF01582;PF01582;PF00931;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_332833-337013' '(at5g17680 : 422.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 125.0) no description available & (gnl|cdd|39857 : 107.0) no description available & (reliability: 844.0) & (original description: Putative HD8, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05177_365946-370540' '(at3g46530 : 434.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39857 : 430.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (reliability: 820.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05566_231037-237144' '(gnl|cdd|39857 : 195.0) no description available & (gnl|cdd|85132 : 187.0) no description available & (at3g07040 : 171.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05619_46135-51407' '(at3g14470 : 387.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 329.0) no description available & (gnl|cdd|85132 : 246.0) no description available & (reliability: 774.0) & (original description: Putative HMA7, Description = Putative uncharacterized protein HMA7, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05872_227625-230194' '(at1g65870 : 196.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 392.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05982_53690-63333' '(at2g34930 : 253.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 150.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 107.0) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF13855;PF13855;PF13855;PF00560;PF00560;PF08263)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06059_165561-169252' '(gnl|cdd|39857 : 274.0) no description available & (at1g50180 : 247.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 494.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06305_412973-415545' '(p13240|dr206_pea : 230.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 195.0) no description available & (at4g23690 : 190.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06305_438181-440738' '(p13240|dr206_pea : 221.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 204.0) no description available & (at4g23690 : 178.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06347_190640-195390' '(gnl|cdd|39857 : 292.0) no description available & (gnl|cdd|85132 : 239.0) no description available & (at1g53350 : 205.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06347_192215-195405' '(gnl|cdd|85132 : 193.0) no description available & (gnl|cdd|39857 : 178.0) no description available & (at3g46530 : 124.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative RGA90, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06473_18941-39970' '(gnl|cdd|39857 : 314.0) no description available & (at3g46730 : 250.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 249.0) no description available & (reliability: 500.0) & (original description: Putative GPA2, Description = Disease resistance protein RGH5, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06553_12240-56028' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 199.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative NBS209, Description = NBS-coding resistance gene analog, PFAM = PF01419;PF01419;PF01419;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06684_312766-315650' '(at5g24090 : 417.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p23472|chly_hevbr : 414.0) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)] - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|39899 : 331.0) no description available & (gnl|cdd|84965 : 111.0) no description available & (reliability: 834.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF00704)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06709_481120-486712' '(gnl|cdd|39857 : 293.0) no description available & (at4g27220 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 147.0) no description available & (reliability: 428.0) & (original description: Putative PGSC0003DMG400027325, Description = Nbs-lrr resistance protein, PFAM = PF13855;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06736_822224-833950' '(at4g12010 : 301.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (gnl|cdd|85544 : 130.0) no description available & (gnl|cdd|39857 : 100.0) no description available & (reliability: 602.0) & (original description: Putative PGSC0003DMG400010527, Description = Putative ovule protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_415059-431537' '(at5g17680 : 544.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 166.0) no description available & (gnl|cdd|85132 : 166.0) no description available & (reliability: 1088.0) & (original description: Putative nl27, Description = NL27, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_670783-673860' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 108.0) no description available & (reliability: 272.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 230.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07123ctg010_2215-5124' '(at1g35710 : 457.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 326.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 157.0) no description available & (reliability: 842.0) & (original description: Putative EILP, Description = Elicitor-inducible LRR receptor-like protein EILP, PFAM = PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07223_342573-345043' '(at3g58090 : 107.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative DIR17, Description = AtDIR17, PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07298_9470-11026' '(gnl|cdd|85132 : 154.0) no description available & (gnl|cdd|39857 : 138.0) no description available & (at3g46530 : 110.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative hero, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07355_114380-117798' '(at1g33590 : 505.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, response to karrikin, defense response; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33600.1); Has 74647 Blast hits to 28620 proteins in 1034 species: Archae - 16; Bacteria - 6743; Metazoa - 19007; Fungi - 704; Plants - 43140; Viruses - 2; Other Eukaryotes - 5035 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 1010.0) & (original description: Putative At1g33590, Description = Leucine-rich repeat (LRR) family protein, PFAM = PF08263;PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07488_11575-17792' '(gnl|cdd|39857 : 395.0) no description available & (at4g26090 : 296.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|85132 : 208.0) no description available & (reliability: 548.0) & (original description: Putative PGSC0003DMG400013736, Description = , PFAM = PF13855;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08006_139457-145297' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at5g48620 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative R1A, Description = Late blight resistance protein R1-A, PFAM = PF12061;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08390_91961-98276' '(at5g36930 : 506.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 139.0) no description available & (gnl|cdd|39857 : 130.0) no description available & (reliability: 1012.0) & (original description: Putative HD20, Description = TMV resistance protein N, putative, PFAM = PF01582;PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08597_247316-252105' '(gnl|cdd|39857 : 334.0) no description available & (at3g46530 : 268.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 252.0) no description available & (reliability: 508.0) & (original description: Putative PGSC0003DMG400013891, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08698_190710-194352' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 228.0) no description available & (at1g59780 : 219.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PGSC0003DMG400021169, Description = , PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08819_227098-229670' '(p13240|dr206_pea : 226.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (at4g23690 : 195.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 194.0) no description available & (reliability: 390.0) & (original description: Putative DIR6, Description = Dirigent protein 6, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08975_343656-350087' '(at3g14470 : 421.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 378.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (reliability: 842.0) & (original description: Putative PGSC0003DMG400033651, Description = Putative disease resistance gene NBS-LRR family protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf09716_255000-267644' '(gnl|cdd|39857 : 368.0) no description available & (at5g35450 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10015_911723-914593' '(at2g39430 : 217.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 434.0) & (original description: Putative DIR9, Description = Disease resistance-responsive family protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10015_914594-936166' '(at4g13580 : 107.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G24020.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 82.6) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400023414, Description = Disease resistance-responsive family protein, putative, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10228_219623-222093' '(at3g58090 : 110.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOC100856949, Description = Os01g0835600 protein, PFAM = )' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10767_459096-486067' '(gnl|cdd|39857 : 309.0) no description available & (at1g53350 : 272.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 544.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf11154_70090-82396' '(at5g17680 : 508.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 155.0) no description available & (gnl|cdd|39857 : 149.0) no description available & (reliability: 1016.0) & (original description: Putative nl27, Description = NL27, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12102_300511-303077' '(at2g21100 : 158.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 131.0) no description available & (reliability: 316.0) & (original description: Putative DIR1, Description = Dirigent protein 1, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12305_13030-18279' '(gnl|cdd|39857 : 296.0) no description available & (at5g48620 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 227.0) no description available & (reliability: 462.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12364_28663-31211' '(at2g21100 : 199.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 134.0) no description available & (reliability: 398.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 238.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13231_178055-183850' '(gnl|cdd|39857 : 256.0) no description available & (at5g35450 : 185.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 180.0) no description available & (reliability: 370.0) & (original description: Putative PGSC0003DMG400004873, Description = Putative ovule protein, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13394_145215-147772' '(p13240|dr206_pea : 214.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 206.0) no description available & (at4g23690 : 179.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13842_126015-142638' '(at1g47890 : 403.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 184.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 126.0) no description available & (reliability: 806.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF08263;PF00560;PF13855)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13926_197831-205737' '(p07053|pr1b_tobac : 289.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 186.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 162.0) no description available & (gnl|cdd|38227 : 130.0) no description available & (reliability: 372.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf17398_4515-9049' '(at3g50950 : 983.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|39857 : 403.0) no description available & (gnl|cdd|85132 : 291.0) no description available & (reliability: 1966.0) & (original description: Putative RPP13L4, Description = Disease resistance RPP13-like protein 4, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf17839_525462-529811' '(gnl|cdd|39857 : 313.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at5g35450 : 235.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative , Description = NBS resistance protein RGA41, PFAM = PF00931)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf20629_10351-16616' '(at5g36930 : 514.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 137.0) no description available & (gnl|cdd|39857 : 134.0) no description available & (reliability: 1028.0) & (original description: Putative HD20, Description = TIR-NBS type disease resistance protein, PFAM = PF00931;PF01582)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf23557_70722-73766' '(at5g23400 : 566.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G26380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 171.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 132.0) no description available & (reliability: 1132.0) & (original description: Putative At5g23400, Description = Disease resistance protein-like, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf30418_23754-26761' '(at2g39430 : 216.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 432.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T
'20.1.7' 'stress.biotic.PR-proteins' 'niben101scf34945_122981-125995' '(at1g61105 : 213.0) Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT1G52900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaA09g13890D, Description = BnaA09g13890D protein, PFAM = PF01582)' T
'20.1.7.6' 'stress.biotic.PR-proteins.proteinase inhibitors' 'niben101scf05363_427254-430362' '(gnl|cdd|29118 : 140.0) no description available & (gnl|cdd|37603 : 117.0) no description available & (at1g47710 : 115.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 92.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (reliability: 210.0) & (original description: Putative ps-1, Description = Serpin-like protein, PFAM = PF00079)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'nbv0.3scaffold13077_21562-24164' '(gnl|cdd|29140 : 147.0) no description available & (at1g17860 : 97.8) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p16347|iaas_wheat : 81.3) Endogenous alpha-amylase/subtilisin inhibitor (WASI) - Triticum aestivum (Wheat) & (reliability: 195.6) & (original description: Putative PI, Description = Kunitz-like protease inhibitor, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf00298_324627-337044' '(at1g19110 : 777.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 180.0) no description available & (reliability: 1554.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf02353_636846-639472' '(at1g17860 : 199.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 170.0) no description available & (p29421|iaas_orysa : 99.4) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative KTI1, Description = Miraculin, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf02353_757573-760199' '(at1g17860 : 199.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 167.0) no description available & (p29421|iaas_orysa : 97.4) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative KTI1, Description = Kunitz trypsin inhibitor 1, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf04078_2-2631' '(at1g17860 : 196.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 169.0) no description available & (p29421|iaas_orysa : 92.8) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 392.0) & (original description: Putative ASP, Description = 21 kDa seed protein, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf05063_409613-419918' '(at1g19110 : 786.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 190.0) no description available & (reliability: 1572.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06424_57413-60036' '(gnl|cdd|29140 : 149.0) no description available & (at1g17860 : 147.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p16347|iaas_wheat : 100.0) Endogenous alpha-amylase/subtilisin inhibitor (WASI) - Triticum aestivum (Wheat) & (reliability: 294.0) & (original description: Putative KTPI, Description = Kunitz-type protease inhibitor, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06424_232243-234504' '(at1g17860 : 226.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 185.0) no description available & (p29421|iaas_orysa : 111.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 452.0) & (original description: Putative KTI1, Description = Kunitz type trypsin inhibitor / miraculin, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06825_14209-16823' '(at1g17860 : 222.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 183.0) no description available & (p29421|iaas_orysa : 107.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 444.0) & (original description: Putative KTI1, Description = Kunitz type trypsin inhibitor / miraculin, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf07932_12429-22856' '(at1g19110 : 810.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 188.0) no description available & (reliability: 1620.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf08855_8312-10982' '(gnl|cdd|29140 : 152.0) no description available & (at1g17860 : 133.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p29421|iaas_orysa : 100.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 266.0) & (original description: Putative Kti, Description = Kunitz inhibitor ST1-like protein, PFAM = PF00197)' T
'20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf11312_76855-90785' '(at1g19110 : 710.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 191.0) no description available & (reliability: 1420.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'nbv0.3scaffold26677_16954-22782' '(at5g45110 : 554.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF00651;PF12313;PF11900)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben044scf00024156ctg002_763-6005' '(at5g45110 : 522.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF12796;PF12313;PF00651;PF11900)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf03101_255370-261809' '(at5g45110 : 503.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative NML2, Description = NIM1-like protein 2, PFAM = PF12313;PF11900;PF00651)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf05245_21444-27272' '(at5g45110 : 603.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF12313;PF11900;PF00651)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf14780_105875-112100' '(at1g64280 : 522.0) This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.; NONEXPRESSER OF PR GENES 1 (NPR1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT4G26120.1); Has 5193 Blast hits to 3365 proteins in 257 species: Archae - 2; Bacteria - 309; Metazoa - 2278; Fungi - 110; Plants - 802; Viruses - 16; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative NPR1, Description = Regulatory protein NPR1, PFAM = PF00651;PF12313;PF11900;PF13637)' T
'20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf19043_30851-35616' '(at5g45110 : 479.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF00651;PF11900;PF12313)' T
'20.1.7.10.1' 'stress.biotic.PR-proteins.NPR.NPR1' 'niben101scf14780_105875-112100' '(at1g64280 : 522.0) This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.; NONEXPRESSER OF PR GENES 1 (NPR1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT4G26120.1); Has 5193 Blast hits to 3365 proteins in 257 species: Archae - 2; Bacteria - 309; Metazoa - 2278; Fungi - 110; Plants - 802; Viruses - 16; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative NPR1, Description = Regulatory protein NPR1, PFAM = PF00651;PF12313;PF11900;PF13637)' T
'20.1.7.12' 'stress.biotic.PR-proteins.plant defensins' '' ''
'20.1.1001' 'stress.biotic' 'melezitose' 'commonly found in honeys and in honey dew produced by apids but lacking from plant nectar' M
'20.2' 'stress.abiotic' 'nbv0.3scaffold13440_4312-6983' '(gnl|cdd|84687 : 259.0) no description available & (p13046|prr1_tobac : 258.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (at4g11650 : 249.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'nbv0.3scaffold16212_32686-37817' '(at2g26660 : 221.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 162.0) no description available & (gnl|cdd|66759 : 92.4) no description available & (reliability: 442.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'nbv0.3scaffold21450_8542-18652' '(at5g62130 : 430.0) Per1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT1G16560.3). & (gnl|cdd|86533 : 323.0) no description available & (gnl|cdd|38181 : 305.0) no description available & (reliability: 826.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'nbv0.3scaffold33071_15201-20969' '(at3g01420 : 332.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 105.0) no description available & (reliability: 664.0) & (original description: Putative adox2, Description = Pathogen-inducible alpha-dioxygenase, PFAM = PF03098)' T
'20.2' 'stress.abiotic' 'nbv0.3scaffold35377_15979-20167' '(at5g20150 : 214.0) SPX domain gene 1 (SPX1); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 2 (TAIR:AT2G26660.1); Has 1126 Blast hits to 1124 proteins in 197 species: Archae - 3; Bacteria - 7; Metazoa - 241; Fungi - 471; Plants - 313; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36376 : 165.0) no description available & (gnl|cdd|66759 : 97.4) no description available & (reliability: 428.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 1, PFAM = PF03105)' T
'20.2' 'stress.abiotic' 'nbv0.3scaffold43356_2160-5656' '(at2g37570 : 605.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T
'20.2' 'stress.abiotic' 'nbv0.5scaffold250_26057-33157' '(at3g15620 : 818.0) Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.; UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35355 : 517.0) no description available & (gnl|cdd|86321 : 297.0) no description available & (p40115|phr1_sinal : 142.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1636.0) & (original description: Putative UVR3, Description = (6-4)DNA photolyase, PFAM = PF00875;PF03441)' T
'20.2' 'stress.abiotic' 'nbv0.5scaffold2766_6801-17549' '(at5g15330 : 230.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 126.0) no description available & (gnl|cdd|66759 : 85.1) no description available & (reliability: 460.0) & (original description: Putative SPX4, Description = SPX domain-containing protein 4, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'nbv0.5scaffold3538_138424-247271' '(at3g11930 : 112.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BnaA03g32010D, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T
'20.2' 'stress.abiotic' 'nbv0.5scaffold6581_8443-12107' '(at5g52060 : 298.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 154.0) no description available & (gnl|cdd|29214 : 102.0) no description available & (reliability: 596.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben044scf00005828ctg007_9444-14895' '(at2g30105 : 104.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). & (gnl|cdd|29214 : 81.0) no description available & (reliability: 194.8) & (original description: Putative IRL8, Description = BCL-2-associated athanogene 4 isoform 1, PFAM = PF02179;PF00240)' T
'20.2' 'stress.abiotic' 'niben044scf00011617ctg000_1838-5722' '(at4g39640 : 612.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 506.0) no description available & (gnl|cdd|85189 : 441.0) no description available & (reliability: 1224.0) & (original description: Putative GGT1, Description = Gamma-glutamyltranspeptidase 1, PFAM = PF01019)' T
'20.2' 'stress.abiotic' 'niben044scf00014217ctg014_8160-22239' '(at5g64940 : 1076.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 424.0) no description available & (gnl|cdd|31005 : 406.0) no description available & (reliability: 2152.0) & (original description: Putative aarF, Description = ABC1 family protein, PFAM = PF03109)' T
'20.2' 'stress.abiotic' 'niben044scf00017779ctg002_1665-8734' '(at3g47860 : 390.0) Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.; chloroplastic lipocalin (CHL); FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 184 Blast hits to 184 proteins in 68 species: Archae - 0; Bacteria - 14; Metazoa - 66; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|40021 : 202.0) no description available & (reliability: 780.0) & (original description: Putative CHL, Description = Chloroplastic lipocalin, PFAM = PF08212)' T
'20.2' 'stress.abiotic' 'niben044scf00017875ctg008_30636-33284' '(at4g11650 : 284.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (p14170|osmo_tobac : 263.0) Osmotin precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84687 : 260.0) no description available & (reliability: 568.0) & (original description: Putative tlp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben044scf00018435ctg004_3672-7336' '(at5g52060 : 300.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 151.0) no description available & (gnl|cdd|29214 : 102.0) no description available & (reliability: 600.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben044scf00019334ctg000_3740-10144' '(at1g16560 : 390.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 313.0) no description available & (gnl|cdd|38181 : 295.0) no description available & (reliability: 780.0) & (original description: Putative BnaC08g38330D, Description = BnaC08g38330D protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben044scf00028352ctg007_38582-41160' '(at2g47770 : 135.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T
'20.2' 'stress.abiotic' 'niben044scf00034160ctg007_1-4119' '(at2g37570 : 714.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1428.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T
'20.2' 'stress.abiotic' 'niben044scf00047784ctg002_1853-4524' '(p13046|prr1_tobac : 256.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84687 : 256.0) no description available & (at4g11650 : 247.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben101scf00119_90681-95096' '(at2g28790 : 350.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 1542 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 19; Metazoa - 54; Fungi - 86; Plants - 1377; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47535 : 286.0) no description available & (q9fsg7|tp1a_maldo : 165.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 700.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben101scf00258_301065-307370' '(at1g16560 : 394.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 315.0) no description available & (gnl|cdd|38181 : 298.0) no description available & (reliability: 788.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf00282_431123-436322' '(at5g52060 : 303.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 150.0) no description available & (gnl|cdd|29214 : 101.0) no description available & (reliability: 606.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf00297_9725-12737' '(at4g21860 : 216.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 200.0) no description available & (gnl|cdd|85585 : 175.0) no description available & (reliability: 394.0) & (original description: Putative msr1, Description = Methionine sulfoxide reductase, PFAM = PF01641)' T
'20.2' 'stress.abiotic' 'niben101scf00627_573491-577311' '(at5g52060 : 273.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 139.0) no description available & (gnl|cdd|29214 : 96.1) no description available & (reliability: 546.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf01177_264885-273322' '(at4g39640 : 389.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 318.0) no description available & (gnl|cdd|85189 : 266.0) no description available & (reliability: 778.0) & (original description: Putative GGT4, Description = Putative inactive gamma-glutamyltranspeptidase 4, PFAM = PF01019)' T
'20.2' 'stress.abiotic' 'niben101scf01272_127990-145983' '(at1g49670 : 907.0) molecular function has not been defined. Was shown involved in oxidative stress tolerance.; NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1). & (gnl|cdd|39371 : 225.0) no description available & (gnl|cdd|32313 : 195.0) no description available & (reliability: 1814.0) & (original description: Putative Zadh2, Description = Zinc-binding alcohol dehydrogenase domain-containing protein 2, PFAM = PF00106;PF08240;PF00107)' T
'20.2' 'stress.abiotic' 'niben101scf01400_77860-80537' '(p13046|prr1_tobac : 424.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (at4g11650 : 295.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84687 : 295.0) no description available & (reliability: 590.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben101scf02771_174675-178153' '(at2g37570 : 739.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T
'20.2' 'stress.abiotic' 'niben101scf02854_1078910-1085364' '(at1g16560 : 394.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 316.0) no description available & (gnl|cdd|38181 : 305.0) no description available & (reliability: 788.0) & (original description: Putative BnaC07g26330D, Description = BnaC07g26330D protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf03222_43994-50162' '(at2g26660 : 214.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 160.0) no description available & (gnl|cdd|66759 : 94.7) no description available & (reliability: 428.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 1, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf03599_59789-64512' '(at2g45130 : 297.0) SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36376 : 200.0) no description available & (gnl|cdd|66759 : 113.0) no description available & (reliability: 594.0) & (original description: Putative SPX3, Description = SPX domain-containing protein 3, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf03832_282055-293071' '(at5g20150 : 251.0) SPX domain gene 1 (SPX1); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 2 (TAIR:AT2G26660.1); Has 1126 Blast hits to 1124 proteins in 197 species: Archae - 3; Bacteria - 7; Metazoa - 241; Fungi - 471; Plants - 313; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36376 : 171.0) no description available & (gnl|cdd|66759 : 99.7) no description available & (reliability: 502.0) & (original description: Putative SPX1, Description = IDS4-like protein, PFAM = PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf03871_427496-431533' '(at2g45130 : 113.0) SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36376 : 100.0) no description available & (reliability: 226.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 3, PFAM = )' T
'20.2' 'stress.abiotic' 'niben101scf04133_124356-137162' '(at5g15330 : 300.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 191.0) no description available & (gnl|cdd|66759 : 107.0) no description available & (reliability: 600.0) & (original description: Putative SPX1, Description = Xenotropic and polytropic murine leukemia virus receptor ids-4, putative, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf04184_229098-245892' '(gnl|cdd|38557 : 228.0) no description available & (at5g60340 : 221.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 135.0) no description available & (reliability: 442.0) & (original description: Putative AAK6, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF13238;PF09810)' T
'20.2' 'stress.abiotic' 'niben101scf04217_936436-957000' '(at5g62130 : 435.0) Per1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT1G16560.3). & (gnl|cdd|86533 : 323.0) no description available & (gnl|cdd|38181 : 304.0) no description available & (reliability: 832.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf04490_4869-7985' '(at2g37570 : 658.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1316.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T
'20.2' 'stress.abiotic' 'niben101scf04626_66127-75002' '(at3g01420 : 964.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 416.0) no description available & (gnl|cdd|37619 : 389.0) no description available & (reliability: 1928.0) & (original description: Putative DOX1, Description = Alpha-dioxygenase 1, PFAM = PF03098)' T
'20.2' 'stress.abiotic' 'niben101scf05372_540610-544439' '(gnl|cdd|38557 : 154.0) no description available & (at5g60340 : 122.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 86.9) no description available & (reliability: 244.0) & (original description: Putative ak6, Description = AK6, PFAM = PF13238)' T
'20.2' 'stress.abiotic' 'niben101scf05492_13207-27195' '(at5g64940 : 1066.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 419.0) no description available & (gnl|cdd|31005 : 401.0) no description available & (reliability: 2132.0) & (original description: Putative AKC4, Description = ABC-1-like kinase, PFAM = PF03109)' T
'20.2' 'stress.abiotic' 'niben101scf05824_1576462-1583939' '(at5g07220 : 170.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 96.4) no description available & (gnl|cdd|39562 : 89.7) no description available & (reliability: 340.0) & (original description: Putative Sb03g038830, Description = Putative uncharacterized protein Sb03g038830, PFAM = PF02179;PF00240)' T
'20.2' 'stress.abiotic' 'niben101scf05824_1576563-1583936' '(at5g07220 : 150.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 97.2) no description available & (gnl|cdd|39562 : 83.2) no description available & (reliability: 300.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf06347_492435-496882' '(at2g26660 : 302.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 201.0) no description available & (gnl|cdd|66759 : 116.0) no description available & (reliability: 604.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf06387_111617-116499' '(at1g16560 : 401.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38181 : 300.0) no description available & (gnl|cdd|86533 : 286.0) no description available & (reliability: 802.0) & (original description: Putative BnaC09g26620D, Description = BnaC09g26620D protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf06457_42422-53599' '(at5g15330 : 307.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 190.0) no description available & (gnl|cdd|66759 : 108.0) no description available & (reliability: 614.0) & (original description: Putative SPX4, Description = SPX domain-containing protein 4, PFAM = PF03105;PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf06628_93915-96493' '(at2g47770 : 142.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T
'20.2' 'stress.abiotic' 'niben101scf06628_94137-99135' '(at2g47770 : 115.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TSPO, Description = Benzodiazepine receptor-related family protein, PFAM = PF03073)' T
'20.2' 'stress.abiotic' 'niben101scf07070_225697-243077' '(at3g01420 : 989.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 440.0) no description available & (gnl|cdd|37619 : 396.0) no description available & (reliability: 1978.0) & (original description: Putative DOX1, Description = Alpha-dioxygenase 1, PFAM = PF03098)' T
'20.2' 'stress.abiotic' 'niben101scf07391_11358-15266' '(at5g07220 : 201.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 127.0) no description available & (gnl|cdd|29214 : 91.0) no description available & (reliability: 402.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf07650_375082-378584' '(at2g37570 : 603.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative FYD, Description = F13M22.7, PFAM = )' T
'20.2' 'stress.abiotic' 'niben101scf09017_41382-46848' '(at2g30105 : 97.8) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). & (reliability: 183.4) & (original description: Putative IRL8, Description = BCL-2-associated athanogene 4 isoform 3, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf09044_158798-161541' '(p14170|osmo_tobac : 471.0) Osmotin precursor - Nicotiana tabacum (Common tobacco) & (at4g11650 : 305.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84687 : 293.0) no description available & (reliability: 610.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben101scf09044_172935-175738' '(p25871|olpa_tobac : 460.0) Osmotin-like protein precursor (Pathogenesis-related protein PR-5d) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47535 : 298.0) no description available & (at4g11650 : 282.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative OLPA, Description = Osmotin-like protein, PFAM = PF00314)' T
'20.2' 'stress.abiotic' 'niben101scf09610_92253-109559' '(at3g11930 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 302.0) & (original description: Putative Sb01g021200, Description = Putative uncharacterized protein Sb01g021200, PFAM = PF00582)' T
'20.2' 'stress.abiotic' 'niben101scf10342_233482-239048' '(at1g16560 : 399.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38181 : 304.0) no description available & (gnl|cdd|86533 : 292.0) no description available & (reliability: 798.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf10753_109000-113117' '(at5g07220 : 204.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 126.0) no description available & (gnl|cdd|29214 : 91.4) no description available & (reliability: 408.0) & (original description: Putative BAG3, Description = BAG family molecular chaperone regulator 3, PFAM = PF00240;PF02179)' T
'20.2' 'stress.abiotic' 'niben101scf11774_72906-81478' '(at3g47860 : 399.0) Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.; chloroplastic lipocalin (CHL); FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 184 Blast hits to 184 proteins in 68 species: Archae - 0; Bacteria - 14; Metazoa - 66; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|40021 : 206.0) no description available & (reliability: 798.0) & (original description: Putative CHL, Description = Chloroplastic lipocalin, PFAM = PF08212)' T
'20.2' 'stress.abiotic' 'niben101scf12135_10361-15191' '(at2g26660 : 305.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 202.0) no description available & (gnl|cdd|66759 : 118.0) no description available & (reliability: 610.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T
'20.2' 'stress.abiotic' 'niben101scf12154_121315-124817' '(at2g37570 : 739.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T
'20.2' 'stress.abiotic' 'niben101scf15979_192585-199771' '(at3g15620 : 818.0) Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.; UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35355 : 517.0) no description available & (gnl|cdd|86321 : 297.0) no description available & (p40115|phr1_sinal : 142.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1636.0) & (original description: Putative UVR3, Description = (6-4)DNA photolyase, PFAM = PF00875;PF03441)' T
'20.2' 'stress.abiotic' 'niben101scf16007_112669-120312' '(at1g16560 : 474.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 347.0) no description available & (gnl|cdd|38181 : 329.0) no description available & (reliability: 948.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T
'20.2' 'stress.abiotic' 'niben101scf39514_225-3232' '(at4g05440 : 378.0) embryo sac development arrest 35 (EDA35); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D123 (InterPro:IPR009772); Has 352 Blast hits to 345 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 149; Plants - 53; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38194 : 321.0) no description available & (gnl|cdd|87211 : 297.0) no description available & (reliability: 756.0) & (original description: Putative EDA35, Description = Cell division cycle protein 123 homolog, PFAM = PF07065)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold35_83369-96342' '(at3g22530 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaA05g17110D, Description = Heat shock 22 kDa protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold1076_83292-89468' '(at2g46240 : 110.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400000079, Description = , PFAM = PF02179;PF00612)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold2186_80346-83596' '(at4g14830 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA05g17110D, Description = BnaA05g17110D protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold2213_7599-28050' '(at1g65280 : 460.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|39390 : 131.0) no description available & (reliability: 920.0) & (original description: Putative BnaA09g23070D, Description = BnaA09g23070D protein, PFAM = PF00226;PF12572)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold3387_6232-11650' '(at2g20560 : 378.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|35933 : 224.0) no description available & (gnl|cdd|30832 : 215.0) no description available & (q04960|dnjh_cucsa : 94.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 756.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold5458_17330-20630' '(at4g18880 : 284.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 163.0) no description available & (reliability: 568.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold6673_1-6611' '(at1g79940 : 598.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|35940 : 248.0) no description available & (gnl|cdd|34966 : 136.0) no description available & (reliability: 1196.0) & (original description: Putative dnj45, Description = DnaJ / Sec63 Brl domains-containing protein, PFAM = PF02889;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold6748_32416-41875' '(at1g79940 : 709.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|35940 : 256.0) no description available & (gnl|cdd|47902 : 163.0) no description available & (reliability: 1418.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold7950_33568-39540' '(at5g16820 : 338.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 214.0) no description available & (gnl|cdd|84779 : 212.0) no description available & (reliability: 676.0) & (original description: Putative HSFA1B, Description = Heat stress transcription factor A-1b, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold8427_13050-32392' '(at1g18700 : 647.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Thioredoxin-like fold (InterPro:IPR012336). & (reliability: 1294.0) & (original description: Putative At1g18700, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold10309_10827-13417' '(p19244|hsp41_pea : 175.0) 22.7 kDa class IV heat shock protein precursor - Pisum sativum (Garden pea) & (at4g10250 : 164.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 102.0) no description available & (gnl|cdd|35929 : 91.7) no description available & (reliability: 328.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold11012_50639-57639' '(at1g24120 : 522.0) encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.; ARG1-like 1 (ARL1); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 24851 Blast hits to 24751 proteins in 3316 species: Archae - 174; Bacteria - 9800; Metazoa - 4410; Fungi - 2460; Plants - 2464; Viruses - 13; Other Eukaryotes - 5530 (source: NCBI BLink). & (gnl|cdd|35932 : 297.0) no description available & (gnl|cdd|30832 : 106.0) no description available & (reliability: 1044.0) & (original description: Putative ATJ16, Description = Chaperone protein dnaJ 16, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold13032_39178-42684' '(at4g18880 : 199.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|84779 : 157.0) no description available & (gnl|cdd|35846 : 156.0) no description available & (reliability: 398.0) & (original description: Putative HSF3, Description = HSF domain class transcription factor, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold13511_12742-18388' '(at5g56030 : 1048.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1043.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 832.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2096.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold15348_5667-10545' '(at1g74250 : 398.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (gnl|cdd|35936 : 297.0) no description available & (reliability: 796.0) & (original description: Putative JJJ1, Description = DNAJ protein JJJ1 homolog, PFAM = PF12171;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold15995_17369-21309' '(at1g11040 : 211.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|35933 : 140.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (q04960|dnjh_cucsa : 82.4) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 422.0) & (original description: Putative Os01g0875700, Description = Os01g0875700 protein, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold16078_33647-38462' '(at2g47440 : 621.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1242.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold17055_8006-12230' '(at3g05345 : 266.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF13459;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold23868_4962-13555' '(at3g62600 : 543.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 353.0) no description available & (gnl|cdd|30832 : 253.0) no description available & (q04960|dnjh_cucsa : 160.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1086.0) & (original description: Putative ERDJ3B, Description = DnaJ protein ERDJ3B, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold25324_15561-20749' '(at1g54850 : 171.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold26034_22643-26607' '(p26413|hsp70_soybn : 982.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 974.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 891.0) no description available & (gnl|cdd|35323 : 889.0) no description available & (reliability: 1948.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold28581_3214-10853' '(at2g22360 : 539.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 400.0) no description available & (gnl|cdd|35934 : 236.0) no description available & (q04960|dnjh_cucsa : 134.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1078.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold28887_94-5547' '(q04960|dnjh_cucsa : 568.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 526.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 387.0) no description available & (gnl|cdd|30832 : 299.0) no description available & (reliability: 1052.0) & (original description: Putative ddj1, Description = DnaJ-like protein, PFAM = PF00684;PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold29680_3739-9785' '(at1g79920 : 1264.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 857.0) no description available & (gnl|cdd|84440 : 433.0) no description available & (p09189|hsp7c_pethy : 269.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2528.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold31671_1706-6033' '(at2g05230 : 602.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (reliability: 1204.0) & (original description: Putative At2g05230, Description = At2g05250/F5G3.15, PFAM = PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold35732_8348-21663' '(at1g80030 : 528.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 379.0) no description available & (gnl|cdd|35934 : 210.0) no description available & (q04960|dnjh_cucsa : 131.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1056.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold40357_1421-16271' '(at1g28210 : 468.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 368.0) no description available & (gnl|cdd|35934 : 214.0) no description available & (q04960|dnjh_cucsa : 135.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 936.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold40374_12915-17177' '(at3g14200 : 132.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 87.6) no description available & (reliability: 264.0) & (original description: Putative dnaJ, Description = Putative uncharacterized protein Sb10g006350, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold47604_12819-15705' '(at5g64360 : 105.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold48115_1893-4450' '(at4g10250 : 135.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 135.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|35929 : 107.0) no description available & (gnl|cdd|84439 : 105.0) no description available & (reliability: 270.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold50569_9982-14969' '(q04960|dnjh_cucsa : 539.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 508.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 390.0) no description available & (gnl|cdd|30832 : 306.0) no description available & (reliability: 1016.0) & (original description: Putative B38, Description = DnaJ homolog, PFAM = PF00226;PF00684;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold54705_12595-14944' '(p09189|hsp7c_pethy : 191.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 189.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 149.0) no description available & (gnl|cdd|84440 : 131.0) no description available & (reliability: 378.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold55133_9225-12266' '(p09886|hs21c_pea : 133.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 128.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 84.5) no description available & (reliability: 256.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold56583_1341-5502' '(at1g79920 : 335.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 279.0) no description available & (gnl|cdd|84440 : 205.0) no description available & (p09189|hsp7c_pethy : 148.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 670.0) & (original description: Putative pss1, Description = Heat shock 70 kDa protein 4, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold58783_230-7001' '(at3g12170 : 283.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: J-domain protein 6 (TAIR:AT5G06910.1); Has 23895 Blast hits to 23888 proteins in 3317 species: Archae - 171; Bacteria - 9423; Metazoa - 4258; Fungi - 2263; Plants - 2420; Viruses - 67; Other Eukaryotes - 5293 (source: NCBI BLink). & (gnl|cdd|35938 : 207.0) no description available & (gnl|cdd|30832 : 96.1) no description available & (reliability: 566.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold61544_4184-11299' '(at5g49580 : 487.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 305.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 974.0) & (original description: Putative BnaC07g27310D, Description = BnaC07g27310D protein, PFAM = PF14901;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold61947_4089-8936' '(at5g16820 : 333.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 220.0) no description available & (gnl|cdd|35846 : 208.0) no description available & (reliability: 666.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold62292_5964-9276' '(at1g79920 : 175.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ophh-56, Description = Heat shock protein (HSP110/SSE1 subfamily), PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold65281_1831-9178' '(p35016|enpl_catro : 1189.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1136.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 978.0) no description available & (gnl|cdd|84591 : 681.0) no description available & (reliability: 2272.0) & (original description: Putative HSP90, Description = Endoplasmin homolog, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold68493_1663-5232' '(at5g54660 : 178.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative HSP21.7, Description = 21.7 kDa class VI heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold71033_4701-7754' '(at5g51440 : 160.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 149.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 85.3) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 320.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold71649_1-8221' '(at5g15450 : 1484.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 952.0) no description available & (gnl|cdd|36269 : 850.0) no description available & (q6f2y7|hs101_orysa : 761.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2968.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF02861;PF02861;PF10431;PF00004;PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold73634_3969-8182' '(at2g47440 : 618.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1236.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold77000_1168-3638' '(p05477|hsp21_soybn : 199.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 148.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 121.0) no description available & (gnl|cdd|35929 : 117.0) no description available & (reliability: 296.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold79553_560-3030' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 150.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 118.0) no description available & (reliability: 300.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold83091_1-6295' '(at5g22080 : 269.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (gnl|cdd|36365 : 95.2) no description available & (reliability: 538.0) & (original description: Putative dnj27, Description = Molecular chaperone, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold87468_1-2069' '(p04793|hsp13_soybn : 157.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at5g59720 : 151.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35929 : 112.0) no description available & (gnl|cdd|84439 : 104.0) no description available & (reliability: 302.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold91314_5-4359' '(at3g14200 : 149.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 90.3) no description available & (reliability: 298.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold92069_1-5088' '(q08276|hsp7m_soltu : 1097.0) Heat shock 70 kDa protein, mitochondrial precursor - Solanum tuberosum (Potato) & (at5g09590 : 1052.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|80608 : 980.0) no description available & (gnl|cdd|35325 : 944.0) no description available & (reliability: 2104.0) & (original description: Putative dnaK, Description = Chaperone protein DnaK, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold101235_159-3255' '(at4g11660 : 245.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 160.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 490.0) & (original description: Putative HSFB2B, Description = Heat stress transcription factor B-2b, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold114376_1-2496' '(q01545|hsp22_iponi : 132.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 122.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 103.0) no description available & (gnl|cdd|35929 : 94.0) no description available & (reliability: 244.0) & (original description: Putative hsp2, Description = 17.7 kDa heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold115_804293-809033' '(at4g11660 : 115.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 114.0) no description available & (gnl|cdd|84779 : 113.0) no description available & (reliability: 230.0) & (original description: Putative HSF, Description = Heat shock transcription factor, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold296_736206-865470' '(at5g22080 : 219.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (reliability: 438.0) & (original description: Putative dnj27, Description = BnaA10g14230D protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold456_467547-471019' '(at5g02500 : 725.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 718.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|84440 : 610.0) no description available & (gnl|cdd|35323 : 607.0) no description available & (reliability: 1450.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold505_622449-624898' '(at4g10250 : 123.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 123.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|84439 : 86.0) no description available & (gnl|cdd|35929 : 83.3) no description available & (reliability: 246.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold831_488742-512036' '(at1g79920 : 1256.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 858.0) no description available & (gnl|cdd|84440 : 434.0) no description available & (p09189|hsp7c_pethy : 270.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2512.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1176_277966-364765' '(at4g10130 : 82.8) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = DNAJ heat shock N-terminal domain-containing protein isoform 1, PFAM = PF05207)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1217_271405-276281' '(at5g56030 : 1050.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1048.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 831.0) no description available & (gnl|cdd|84591 : 763.0) no description available & (reliability: 2100.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1958_215432-226244' '(at3g13310 : 101.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 90.3) no description available & (reliability: 202.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2156_124123-129121' '(at5g59610 : 181.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 99.1) no description available & (gnl|cdd|35934 : 83.6) no description available & (reliability: 362.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2521_194910-198761' '(at5g15450 : 579.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83547 : 407.0) no description available & (gnl|cdd|36269 : 351.0) no description available & (q6f2y7|hs101_orysa : 323.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 1158.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2632_33722-38246' '(q04960|dnjh_cucsa : 549.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 513.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 393.0) no description available & (gnl|cdd|30832 : 309.0) no description available & (reliability: 1026.0) & (original description: Putative DNAJ1, Description = DnaJ protein homolog, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold3886_166932-170008' '(at2g01710 : 142.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = , PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold4299_105930-122863' '(at2g35720 : 518.0) Encodes OWL1, a J-domain protein involved in perception of very low light fluences.; ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, vegetative to reproductive phase transition of meristem, response to very low light intensity stimulus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G47940.1); Has 23021 Blast hits to 22960 proteins in 3212 species: Archae - 168; Bacteria - 9682; Metazoa - 3958; Fungi - 2136; Plants - 2202; Viruses - 13; Other Eukaryotes - 4862 (source: NCBI BLink). & (gnl|cdd|35937 : 398.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 1036.0) & (original description: Putative dnaJ, Description = Chaperone protein dnaJ 13, PFAM = PF11875;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold4693_55721-72610' '(at1g11660 : 533.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink). & (gnl|cdd|35326 : 367.0) no description available & (gnl|cdd|84440 : 162.0) no description available & (p09189|hsp7c_pethy : 114.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1066.0) & (original description: Putative Os06g0679800, Description = Os06g0679800 protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5186_84203-90420' '(at2g46240 : 110.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400000079, Description = , PFAM = PF02179;PF00612)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5379_56687-73763' '(at1g28210 : 464.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 365.0) no description available & (gnl|cdd|35934 : 211.0) no description available & (q04960|dnjh_cucsa : 135.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 928.0) & (original description: Putative ATJ1, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF01556;PF00226;PF00684)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5379_58884-69672' '(at1g28210 : 365.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 305.0) no description available & (gnl|cdd|35934 : 209.0) no description available & (q04960|dnjh_cucsa : 117.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 730.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF01556;PF00684)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5762_12099-30976' '(at3g62190 : 85.1) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 805 Blast hits to 805 proteins in 198 species: Archae - 8; Bacteria - 249; Metazoa - 41; Fungi - 73; Plants - 71; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative BnaA09g39740D, Description = BnaA09g39740D protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold7064_2031-5920' '(at2g26150 : 241.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 169.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 482.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold8027_43014-48505' '(q03684|bip4_tobac : 1165.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1078.0) no description available & (at5g28540 : 1077.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 857.0) no description available & (reliability: 2154.0) & (original description: Putative bip, Description = 78 kDa glucose-regulated protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold8318_1687-5563' '(p09189|hsp7c_pethy : 566.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 565.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 520.0) no description available & (gnl|cdd|35323 : 492.0) no description available & (reliability: 1130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00001000ctg003_18651-25587' '(at3g08910 : 439.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink). & (gnl|cdd|30832 : 212.0) no description available & (gnl|cdd|35933 : 209.0) no description available & (q04960|dnjh_cucsa : 95.1) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 878.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00001628ctg006_249-3055' '(at2g27140 : 82.4) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G20970.1); Has 712 Blast hits to 708 proteins in 96 species: Archae - 0; Bacteria - 37; Metazoa - 7; Fungi - 2; Plants - 649; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400008714, Description = Hsp20/alpha crystallin family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00002407ctg004_1-2646' '(p09886|hs21c_pea : 132.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 130.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 84.1) no description available & (reliability: 260.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00003675ctg002_9845-13332' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 109.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00005792ctg020_1-8577' '(at1g75310 : 189.0) auxin-like 1 protein (AUL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36520.1); Has 43064 Blast hits to 29150 proteins in 1965 species: Archae - 316; Bacteria - 7312; Metazoa - 16664; Fungi - 4671; Plants - 2417; Viruses - 306; Other Eukaryotes - 11378 (source: NCBI BLink). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 378.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00006881ctg014_1-4231' '(at1g79030 : 470.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 17828 Blast hits to 17824 proteins in 3062 species: Archae - 123; Bacteria - 7609; Metazoa - 2994; Fungi - 1488; Plants - 1684; Viruses - 8; Other Eukaryotes - 3922 (source: NCBI BLink). & (gnl|cdd|35939 : 209.0) no description available & (gnl|cdd|84624 : 80.6) no description available & (reliability: 940.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF14901;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00006964ctg005_10905-19721' '(at3g47940 : 385.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 27840 Blast hits to 26488 proteins in 3397 species: Archae - 203; Bacteria - 10747; Metazoa - 4580; Fungi - 2597; Plants - 2794; Viruses - 15; Other Eukaryotes - 6904 (source: NCBI BLink). & (gnl|cdd|30832 : 196.0) no description available & (gnl|cdd|35933 : 192.0) no description available & (q04960|dnjh_cucsa : 95.9) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 770.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00007018ctg001_6544-8959' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 145.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 119.0) no description available & (reliability: 290.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00007315ctg000_580-5027' '(at2g35795 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 143.0) no description available & (reliability: 334.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00007358ctg001_5000-9566' '(at2g05230 : 582.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (gnl|cdd|84624 : 81.0) no description available & (reliability: 1164.0) & (original description: Putative PGSC0003DMG400006125, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00007702ctg016_43134-50853' '(at2g29970 : 634.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 474.0) no description available & (reliability: 1268.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00008462ctg002_5739-18745' '(at5g12430 : 546.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 138.0) no description available & (reliability: 1080.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00010244ctg009_15709-18782' '(at1g54850 : 80.9) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00010261ctg001_1454-5468' '(at2g20560 : 362.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 190.0) no description available & (gnl|cdd|35931 : 181.0) no description available & (q04960|dnjh_cucsa : 95.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 724.0) & (original description: Putative v1g188073, Description = Predicted protein, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00010488ctg011_187-6093' '(at5g42480 : 698.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1396.0) & (original description: Putative ARC6, Description = Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00010955ctg009_3930-7803' '(at1g56300 : 141.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to cyclopentenone; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G71000.1); Has 23532 Blast hits to 23527 proteins in 3290 species: Archae - 175; Bacteria - 9754; Metazoa - 3953; Fungi - 2136; Plants - 2298; Viruses - 10; Other Eukaryotes - 5206 (source: NCBI BLink). & (gnl|cdd|30832 : 93.8) no description available & (reliability: 282.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00012690ctg001_8456-12680' '(at3g05345 : 243.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF13459)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00015133ctg004_1-2176' '(at3g22530 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative BnaA05g17110D, Description = Putative heat shock 22 kDa protein-like, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00015581ctg010_2024-7365' '(at1g28210 : 273.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 215.0) no description available & (gnl|cdd|35934 : 166.0) no description available & (q04960|dnjh_cucsa : 97.1) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 546.0) & (original description: Putative dnaJ, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00015858ctg008_1-1903' '(at5g54660 : 116.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At5g54660, Description = 21.7 kDa class VI heat shock protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00015967ctg021_9316-11596' '(at5g15450 : 154.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00016540ctg007_10057-18493' '(at1g75310 : 207.0) auxin-like 1 protein (AUL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36520.1); Has 43064 Blast hits to 29150 proteins in 1965 species: Archae - 316; Bacteria - 7312; Metazoa - 16664; Fungi - 4671; Plants - 2417; Viruses - 306; Other Eukaryotes - 11378 (source: NCBI BLink). & (gnl|cdd|35652 : 164.0) no description available & (reliability: 414.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00016695ctg002_1-4578' '(q04960|dnjh_cucsa : 553.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 511.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 392.0) no description available & (gnl|cdd|30832 : 309.0) no description available & (reliability: 1022.0) & (original description: Putative B38, Description = DnaJ homolog, PFAM = PF01556;PF00226;PF00684)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00017074ctg003_5864-10848' '(at2g47440 : 627.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1254.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00017415ctg003_27114-33497' '(at1g74310 : 1370.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1325.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 883.0) no description available & (gnl|cdd|36269 : 815.0) no description available & (reliability: 2740.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF00004;PF10431;PF07724;PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00018815ctg000_3839-9164' '(at1g59725 : 377.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|35931 : 175.0) no description available & (gnl|cdd|30832 : 138.0) no description available & (q04960|dnjh_cucsa : 92.8) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 754.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00020230ctg004_9010-12197' '(at2g40130 : 358.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G29970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36269 : 268.0) no description available & (reliability: 716.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00022307ctg004_44200-49643' '(p09189|hsp7c_pethy : 784.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 775.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84440 : 684.0) no description available & (gnl|cdd|35323 : 660.0) no description available & (reliability: 1550.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00022480ctg004_47-5114' '(at5g18140 : 185.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35934 : 98.6) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 370.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00022510ctg002_64-8932' '(at5g06410 : 209.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, chaperone binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock cognate protein B, C-terminal oligomerisation (InterPro:IPR009073), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Co-chaperone Hsc20 (InterPro:IPR004640); Has 1884 Blast hits to 1884 proteins in 890 species: Archae - 0; Bacteria - 1464; Metazoa - 116; Fungi - 101; Plants - 38; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|38402 : 136.0) no description available & (gnl|cdd|81420 : 89.1) no description available & (reliability: 418.0) & (original description: Putative At5g06410, Description = Molecular chaperone HscB, PFAM = PF07743)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00024619ctg004_12400-15945' '(gnl|cdd|84779 : 120.0) no description available & (gnl|cdd|35846 : 114.0) no description available & (at5g03720 : 108.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00024690ctg004_1-4323' '(at5g53150 : 453.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (reliability: 906.0) & (original description: Putative TCM_014652, Description = DNAJ heat shock N-terminal domain-containing protein, putative, PFAM = PF00226;PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00025616ctg002_1462-5558' '(at5g64360 : 153.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative , Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00031036ctg001_2794-8188' '(at5g27240 : 283.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative At3g04960, Description = AT5g37380/MNJ8_170, PFAM = PF11926;PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00033121ctg006_668-3991' '(at1g20870 : 192.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00035057ctg006_14823-17950' '(at2g01710 : 166.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative POPTR_0002s10560g, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00037397ctg002_7189-12314' '(at5g16650 : 139.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35932 : 82.7) no description available & (reliability: 278.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00037630ctg007_651-3598' '(at1g52560 : 98.2) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00039188ctg013_4765-8524' '(at2g26150 : 246.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 170.0) no description available & (gnl|cdd|84779 : 151.0) no description available & (reliability: 492.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00039676ctg015_12832-17341' '(q03684|bip4_tobac : 1070.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1068.0) no description available & (at5g28540 : 1050.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 853.0) no description available & (reliability: 2100.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00044174ctg004_4054-8412' '(at2g47440 : 641.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1282.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00044823ctg003_3152-10131' '(at5g49910 : 996.0) Stromal heat shock protein involved in protein import into chloroplast.; chloroplast heat shock protein 70-2 (CPHSC70-2EAT SHOCK PROTEIN 70-2); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to heat; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-1 (TAIR:AT4G24280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80608 : 990.0) no description available & (q02028|hsp7s_pea : 988.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|35325 : 822.0) no description available & (reliability: 1992.0) & (original description: Putative dnaK, Description = Chaperone protein DnaK, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00045937ctg003_12861-17169' '(at1g79920 : 337.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 282.0) no description available & (gnl|cdd|84440 : 207.0) no description available & (p09189|hsp7c_pethy : 146.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 674.0) & (original description: Putative pss1, Description = Heat shock 70 kDa protein 4, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00045937ctg003_14480-21067' '(at1g79920 : 1238.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 845.0) no description available & (gnl|cdd|84440 : 429.0) no description available & (p09189|hsp7c_pethy : 265.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2476.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00050645ctg001_3571-7277' '(at4g02100 : 612.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G47440.1); Has 318 Blast hits to 309 proteins in 95 species: Archae - 0; Bacteria - 4; Metazoa - 68; Fungi - 63; Plants - 160; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1224.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00059444ctg000_1-4540' '(at3g14200 : 146.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 89.1) no description available & (reliability: 292.0) & (original description: Putative dnaJ, Description = Chaperone DnaJ-domain containing protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben044scf00062045ctg000_1-5235' '(at4g39150 : 332.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (gnl|cdd|35910 : 142.0) no description available & (reliability: 664.0) & (original description: Putative Os01g0702450, Description = Os01g0702450 protein, PFAM = PF14308)' T
'20.2.1' 'stress.abiotic.heat' 'niben101ctg05021_1-646' '(q01899|hsp7m_phavu : 311.0) Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g09590 : 306.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|35325 : 305.0) no description available & (gnl|cdd|80608 : 271.0) no description available & (reliability: 612.0) & (original description: Putative HSPA9, Description = Stress-70 protein, mitochondrial, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101ctg15726_1-4008' '(gnl|cdd|35846 : 123.0) no description available & (at4g11660 : 122.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|84779 : 119.0) no description available & (reliability: 244.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00028_451164-453760' '(at3g22530 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA05g17110D, Description = Heat shock 22 kDa protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00073_465639-468954' '(at4g18880 : 307.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 176.0) no description available & (gnl|cdd|84779 : 167.0) no description available & (reliability: 614.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00117_343718-350055' '(q02028|hsp7s_pea : 1038.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g24280 : 1010.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 830.0) no description available & (reliability: 2020.0) & (original description: Putative HSP70, Description = Stromal 70 kDa heat shock-related protein, chloroplastic, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00127_320332-473822' '(at1g79920 : 1236.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 846.0) no description available & (gnl|cdd|84440 : 431.0) no description available & (p09189|hsp7c_pethy : 270.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2472.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00141_109862-113520' '(p27880|hsp12_medsa : 140.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (at1g07400 : 132.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 92.2) no description available & (gnl|cdd|35929 : 86.3) no description available & (reliability: 264.0) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00149_163218-170219' '(at3g08910 : 443.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink). & (gnl|cdd|30832 : 214.0) no description available & (gnl|cdd|35933 : 211.0) no description available & (q04960|dnjh_cucsa : 96.7) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 886.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00152_336810-344444' '(at5g42480 : 813.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1626.0) & (original description: Putative ARC6, Description = Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic, PFAM = PF13355)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00167_64166-66082' '(at3g22530 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA05g17110D, Description = Putative heat shock 22 kDa protein-like, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00176_513746-519734' '(at4g21320 : 426.0) Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.; HEAT-STRESS-ASSOCIATED 32 (HSA32); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to heat, heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), (2R)-phospho-3-sulpholactate synthase, ComA (InterPro:IPR003830), Peptidase S8, subtilisin-related (InterPro:IPR015500); Has 279 Blast hits to 279 proteins in 109 species: Archae - 46; Bacteria - 111; Metazoa - 0; Fungi - 36; Plants - 41; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|86069 : 235.0) no description available & (reliability: 852.0) & (original description: Putative HSA32, Description = Protein HEAT-STRESS-ASSOCIATED 32, PFAM = PF02679)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00219_172004-174567' '(at4g10130 : 160.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative Os09g0460000, Description = DNAJ heat shock N-terminal domain-containing protein-like, PFAM = PF00226;PF05207)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00276_170776-173903' '(at2g01710 : 166.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative POPTR_0002s10560g, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00288_930017-989738' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 461.0) no description available & (reliability: 1240.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00294_214615-219607' '(at2g35795 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 143.0) no description available & (reliability: 334.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00305_610102-618363' '(at4g36520 : 214.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 386.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00317_765093-786301' '(at2g35720 : 652.0) Encodes OWL1, a J-domain protein involved in perception of very low light fluences.; ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, vegetative to reproductive phase transition of meristem, response to very low light intensity stimulus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G47940.1); Has 23021 Blast hits to 22960 proteins in 3212 species: Archae - 168; Bacteria - 9682; Metazoa - 3958; Fungi - 2136; Plants - 2202; Viruses - 13; Other Eukaryotes - 4862 (source: NCBI BLink). & (gnl|cdd|35937 : 524.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 1304.0) & (original description: Putative ATJ13, Description = Chaperone protein dnaJ 13, PFAM = PF00226;PF11875)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00317_929801-932854' '(at5g51440 : 160.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 147.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 85.3) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 320.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00370_346477-350212' '(at1g20870 : 192.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain-containing protein 22.3, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00370_356714-361711' '(at1g54850 : 173.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00414_499015-594269' '(gnl|cdd|84591 : 208.0) no description available & (gnl|cdd|35242 : 196.0) no description available & (at5g56030 : 178.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 176.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative hsp83, Description = Heat shock protein 90, PFAM = PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00449_697631-702498' '(p09189|hsp7c_pethy : 1098.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1095.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 898.0) no description available & (reliability: 2190.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00454_166565-171640' '(at5g59610 : 188.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 99.5) no description available & (gnl|cdd|35934 : 84.4) no description available & (reliability: 376.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00519_13026-33941' '(at1g18700 : 663.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Thioredoxin-like fold (InterPro:IPR012336). & (reliability: 1326.0) & (original description: Putative At1g18700, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00528_32060-43619' '(at5g48030 : 491.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 371.0) no description available & (gnl|cdd|35934 : 212.0) no description available & (q04960|dnjh_cucsa : 147.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 982.0) & (original description: Putative GFA2, Description = Chaperone protein dnaJ GFA2, mitochondrial, PFAM = PF00684;PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00530_409762-414317' '(at5g53150 : 509.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 82.9) no description available & (reliability: 1018.0) & (original description: Putative BnaC09g29390D, Description = BnaC09g29390D protein, PFAM = PF00226;PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00571_847684-852254' '(at5g53150 : 443.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 83.6) no description available & (reliability: 886.0) & (original description: Putative DNAJ1, Description = Curved DNA-binding protein, PFAM = PF00226;PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00593_86861-103251' '(at3g47940 : 399.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 27840 Blast hits to 26488 proteins in 3397 species: Archae - 203; Bacteria - 10747; Metazoa - 4580; Fungi - 2597; Plants - 2794; Viruses - 15; Other Eukaryotes - 6904 (source: NCBI BLink). & (gnl|cdd|35933 : 190.0) no description available & (gnl|cdd|30832 : 190.0) no description available & (q04960|dnjh_cucsa : 90.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 798.0) & (original description: Putative v1g233916, Description = Predicted protein, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00654_251293-253787' '(at3g13310 : 88.2) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 84.9) no description available & (reliability: 176.4) & (original description: Putative At3g13310, Description = Co-chaperone-curved DNA binding protein A, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00698_53141-65022' '(at4g16660 : 1081.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35327 : 568.0) no description available & (gnl|cdd|84440 : 286.0) no description available & (p09189|hsp7c_pethy : 218.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2162.0) & (original description: Putative hsp70G, Description = Heat shock 70 kDa protein 17, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00705_405195-407752' '(at4g10250 : 135.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 135.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|35929 : 104.0) no description available & (gnl|cdd|84439 : 102.0) no description available & (reliability: 270.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00749_610247-616489' '(at5g18140 : 198.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35934 : 96.7) no description available & (gnl|cdd|30832 : 96.4) no description available & (reliability: 396.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00758_753339-758502' '(at3g52490 : 664.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 433.0) no description available & (reliability: 1328.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf00912_868331-873395' '(at3g52490 : 600.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 442.0) no description available & (reliability: 1200.0) & (original description: Putative SMXL3, Description = Clp, N-terminal, PFAM = PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01005_17571-21685' '(at5g64360 : 160.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01027_55267-62767' '(at5g52640 : 1028.0) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.; heat shock protein 90.1 (HSP90.1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: defense response to bacterium, response to heat, response to arsenic; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51819|hsp83_iponi : 1023.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35242 : 817.0) no description available & (gnl|cdd|84591 : 746.0) no description available & (reliability: 2056.0) & (original description: Putative HSP83A, Description = Heat shock protein 83, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01063_1-4267' '(at5g16650 : 139.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35932 : 82.4) no description available & (reliability: 278.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01171_452933-456997' '(at4g13830 : 172.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 91.4) no description available & (reliability: 344.0) & (original description: Putative ATJ20, Description = Chaperone protein dnaJ 20, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01301_236410-297357' '(at2g26890 : 3362.0) GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.; GRAVITROPISM DEFECTIVE 2 (GRV2); FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: in 10 processes; LOCATED IN: in 6 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37000 : 1957.0) no description available & (reliability: 6724.0) & (original description: Putative GRV2, Description = DnaJ homolog subfamily C GRV2, PFAM = PF00226;PF14237)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01305_158762-172103' '(at1g32330 : 318.0) Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2.; heat shock transcription factor A1D (HSFA1D); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2363 Blast hits to 2344 proteins in 251 species: Archae - 0; Bacteria - 10; Metazoa - 417; Fungi - 488; Plants - 855; Viruses - 2; Other Eukaryotes - 591 (source: NCBI BLink). & (gnl|cdd|84779 : 231.0) no description available & (gnl|cdd|35846 : 219.0) no description available & (reliability: 594.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01319_602646-605125' '(at2g17880 : 90.5) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 87.2) no description available & (reliability: 181.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01375_841993-851452' '(at1g79940 : 800.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 293.0) no description available & (gnl|cdd|47902 : 188.0) no description available & (reliability: 1600.0) & (original description: Putative C21, Description = DnaJ / Sec63 Brl domains-containing protein, PFAM = PF00226;PF02889)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01382_243784-247945' '(p26413|hsp70_soybn : 981.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 969.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 892.0) no description available & (gnl|cdd|35323 : 890.0) no description available & (reliability: 1938.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01412_182729-185487' '(at1g54050 : 133.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 4491 Blast hits to 4491 proteins in 1181 species: Archae - 166; Bacteria - 2520; Metazoa - 2; Fungi - 140; Plants - 1242; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (p05477|hsp21_soybn : 95.1) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (gnl|cdd|84439 : 84.9) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 266.0) & (original description: Putative hsp2, Description = 17.2 kDa class II heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01475_92379-94576' '(at5g59720 : 184.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27396|hsp11_dauca : 181.0) 17.8 kDa class I heat shock protein (Clone DCHSP17.7) - Daucus carota (Carrot) & (gnl|cdd|84439 : 111.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 368.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01506_408328-411944' '(at2g32120 : 858.0) heat-shock protein 70T-2 (HSP70T-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 23745 Blast hits to 23668 proteins in 4473 species: Archae - 147; Bacteria - 10488; Metazoa - 3198; Fungi - 1451; Plants - 1078; Viruses - 114; Other Eukaryotes - 7269 (source: NCBI BLink). & (gnl|cdd|35324 : 385.0) no description available & (gnl|cdd|84440 : 322.0) no description available & (p09189|hsp7c_pethy : 305.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1716.0) & (original description: Putative HSP70-8, Description = Heat shock 70 kDa protein 8, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01529_447108-465886' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 107.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01556_484429-487315' '(at5g64360 : 105.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01623_1503678-1507884' '(at2g47440 : 642.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1284.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01635_118903-124654' '(at5g57710 : 827.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30350.1); Has 16657 Blast hits to 15152 proteins in 2785 species: Archae - 23; Bacteria - 13282; Metazoa - 28; Fungi - 336; Plants - 548; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink). & (gnl|cdd|36269 : 543.0) no description available & (reliability: 1654.0) & (original description: Putative SMAX1, Description = Protein SUPPRESSOR OF MAX2 1, PFAM = PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01704_4114-12570' '(at3g62600 : 519.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 352.0) no description available & (gnl|cdd|30832 : 255.0) no description available & (q04960|dnjh_cucsa : 164.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1038.0) & (original description: Putative DNAJB11, Description = DnaJ homolog subfamily B member 11, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01704_209335-213518' '(at4g02100 : 579.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G47440.1); Has 318 Blast hits to 309 proteins in 95 species: Archae - 0; Bacteria - 4; Metazoa - 68; Fungi - 63; Plants - 160; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1158.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01777_284012-288052' '(at2g26150 : 335.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 209.0) no description available & (gnl|cdd|35846 : 204.0) no description available & (reliability: 670.0) & (original description: Putative HSF30, Description = Heat shock factor protein HSF30, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01812_283551-286836' '(at1g54400 : 82.8) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G27140.1); Has 638 Blast hits to 638 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 34; Plants - 583; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative PGSC0003DMG400007210, Description = , PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01834_392273-397783' '(at3g52490 : 405.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 381.0) no description available & (reliability: 810.0) & (original description: Putative SMXL3, Description = Os04g0298700 protein, PFAM = PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01940_1445-16560' '(at3g17830 : 409.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 28823 Blast hits to 28018 proteins in 3494 species: Archae - 196; Bacteria - 10926; Metazoa - 4489; Fungi - 2504; Plants - 2754; Viruses - 18; Other Eukaryotes - 7936 (source: NCBI BLink). & (gnl|cdd|30832 : 349.0) no description available & (gnl|cdd|35934 : 205.0) no description available & (q04960|dnjh_cucsa : 108.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 818.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01972_810236-812727' '(at3g22530 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA05g17110D, Description = BnaA05g17110D protein, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf01999_616981-632067' '(q08276|hsp7m_soltu : 1097.0) Heat shock 70 kDa protein, mitochondrial precursor - Solanum tuberosum (Potato) & (at5g09590 : 1049.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 938.0) no description available & (reliability: 2098.0) & (original description: Putative HSP68, Description = Heat shock 70 kDa protein, mitochondrial, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02030_449115-456154' '(q03684|bip4_tobac : 1107.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1081.0) no description available & (at5g28540 : 1074.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 858.0) no description available & (reliability: 2148.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02034_263998-271339' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 463.0) no description available & (reliability: 1240.0) & (original description: Putative fad3a, Description = AtD53-like 3, PFAM = PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02043_264775-269915' '(at1g59725 : 380.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|35931 : 177.0) no description available & (gnl|cdd|30832 : 144.0) no description available & (q04960|dnjh_cucsa : 92.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 760.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02124_147651-152021' '(p26413|hsp70_soybn : 1063.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 1050.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 908.0) no description available & (gnl|cdd|84440 : 893.0) no description available & (reliability: 2100.0) & (original description: Putative HSP70, Description = Heat shock 70 kDa protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02124_193956-197823' '(at1g80920 : 108.0) A nuclear encoded soluble protein found in the chloroplast stroma.; J8; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G05345.1); Has 10939 Blast hits to 10938 proteins in 2525 species: Archae - 126; Bacteria - 6057; Metazoa - 1338; Fungi - 591; Plants - 814; Viruses - 3; Other Eukaryotes - 2010 (source: NCBI BLink). & (gnl|cdd|35934 : 80.9) no description available & (reliability: 216.0) & (original description: Putative ATJ8, Description = Chaperone protein dnaJ 8, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02230_265077-269376' '(at2g41000 : 124.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 95.7) no description available & (reliability: 248.0) & (original description: Putative ATJ72, Description = Chaperone protein dnaJ 72, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02257_196599-204941' '(at2g42750 : 415.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 17700 Blast hits to 17698 proteins in 3061 species: Archae - 180; Bacteria - 8514; Metazoa - 2668; Fungi - 1485; Plants - 1554; Viruses - 15; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|35935 : 160.0) no description available & (gnl|cdd|84624 : 81.3) no description available & (reliability: 830.0) & (original description: Putative dnj38, Description = Chloroplast heat shock protein-binding protein, PFAM = PF13370;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02470_138394-152634' '(at1g11040 : 200.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|30832 : 146.0) no description available & (gnl|cdd|35933 : 144.0) no description available & (reliability: 400.0) & (original description: Putative DNAJ, Description = DnaJ-like protein, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02513_1373-3843' '(p05477|hsp21_soybn : 205.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 147.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 118.0) no description available & (gnl|cdd|35929 : 117.0) no description available & (reliability: 294.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02647_61174-65501' '(at2g05230 : 598.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative At2g25560, Description = At2g25560/F13B15.22, PFAM = PF00226;PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02664_145477-168702' '(at1g65280 : 464.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|39390 : 129.0) no description available & (reliability: 928.0) & (original description: Putative BnaA09g23070D, Description = BnaA09g23070D protein, PFAM = PF12572;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02737_428830-431982' '(at1g53540 : 121.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (p04794|hsp14_soybn : 114.0) 17.5 kDa class I heat shock protein (HSP 17.5-E) - Glycine max (Soybean) & (gnl|cdd|35929 : 110.0) no description available & (gnl|cdd|84439 : 108.0) no description available & (reliability: 242.0) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02771_132776-137895' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2184.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02774_142858-146438' '(at5g37670 : 159.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p04794|hsp14_soybn : 100.0) 17.5 kDa class I heat shock protein (HSP 17.5-E) - Glycine max (Soybean) & (gnl|cdd|35929 : 97.1) no description available & (gnl|cdd|84439 : 87.6) no description available & (reliability: 318.0) & (original description: Putative HSP18, Description = 15.7 kDa heat shock protein, peroxisomal, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02819_3543-6323' '(at1g52560 : 206.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09887|hs22c_soybn : 97.1) Chloroplast small heat shock protein (Fragment) - Glycine max (Soybean) & (gnl|cdd|84439 : 93.7) no description available & (gnl|cdd|35929 : 87.9) no description available & (reliability: 412.0) & (original description: Putative HSP26.5, Description = 26.5 kDa heat shock protein, mitochondrial, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02819_431430-452834' '(at1g80030 : 527.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 383.0) no description available & (gnl|cdd|35934 : 206.0) no description available & (q04960|dnjh_cucsa : 118.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1054.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02824_402457-412386' '(at2g04030 : 1122.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (gnl|cdd|35242 : 735.0) no description available & (gnl|cdd|81471 : 672.0) no description available & (p51819|hsp83_iponi : 527.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2244.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02835_100805-103796' '(at1g76770 : 124.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G76780.1); Has 34199 Blast hits to 13978 proteins in 906 species: Archae - 121; Bacteria - 2729; Metazoa - 11362; Fungi - 2329; Plants - 1617; Viruses - 809; Other Eukaryotes - 15232 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA07g33050D, Description = BnaA07g33050D protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02852_63675-70963' '(at3g07770 : 1084.0) HEAT SHOCK PROTEIN 89.1 (Hsp89.1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Chaperone protein htpG family protein (TAIR:AT2G04030.1); Has 8883 Blast hits to 8831 proteins in 2450 species: Archae - 4; Bacteria - 3390; Metazoa - 2079; Fungi - 316; Plants - 459; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|35242 : 712.0) no description available & (gnl|cdd|81471 : 640.0) no description available & (p36183|enpl_horvu : 518.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (reliability: 2168.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02877_271818-275548' '(at1g06460 : 145.0) ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.; alpha-crystallin domain 32.1 (ACD32.1); INVOLVED IN: response to heat; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 3590 Blast hits to 3590 proteins in 1004 species: Archae - 36; Bacteria - 2284; Metazoa - 1; Fungi - 156; Plants - 751; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative sHsp, Description = Putative small heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02897_83141-95120' '(at1g79940 : 922.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 355.0) no description available & (gnl|cdd|47902 : 206.0) no description available & (reliability: 1844.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf02982_169439-172922' '(at4g13830 : 158.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 88.4) no description available & (reliability: 316.0) & (original description: Putative C20, Description = Heat shock protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03009_6421-15507' '(at4g37480 : 535.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 20733 Blast hits to 20731 proteins in 3179 species: Archae - 168; Bacteria - 8743; Metazoa - 3732; Fungi - 1762; Plants - 1875; Viruses - 8; Other Eukaryotes - 4445 (source: NCBI BLink). & (gnl|cdd|35932 : 85.4) no description available & (gnl|cdd|30832 : 82.2) no description available & (reliability: 1070.0) & (original description: Putative Os03g0761700, Description = DnaJ domain containing protein, expressed, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03038_1360307-1374724' '(at4g36990 : 239.0) encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.; heat shock factor 4 (HSF4); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cyclopentenone, response to heat; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2101 Blast hits to 2087 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 340; Fungi - 475; Plants - 774; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (gnl|cdd|84779 : 153.0) no description available & (gnl|cdd|35846 : 150.0) no description available & (reliability: 478.0) & (original description: Putative HSF24, Description = Heat shock factor protein HSF24, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03121_463893-470872' '(gnl|cdd|80608 : 962.0) no description available & (at4g24280 : 957.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (q02028|hsp7s_pea : 947.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|35325 : 798.0) no description available & (reliability: 1914.0) & (original description: Putative dnaK, Description = Heat shock protein 70 chaperone, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03142_541567-548777' '(at4g29920 : 629.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp amino terminal domain-containing protein (TAIR:AT5G57130.1); Has 2205 Blast hits to 2155 proteins in 769 species: Archae - 7; Bacteria - 1557; Metazoa - 28; Fungi - 31; Plants - 337; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|36269 : 404.0) no description available & (reliability: 1258.0) & (original description: Putative Os04g0298700, Description = Os04g0298700 protein, PFAM = PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03169_5453-9858' '(at2g20560 : 375.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 208.0) no description available & (gnl|cdd|35933 : 206.0) no description available & (q04960|dnjh_cucsa : 96.3) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 750.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03202_540118-547672' '(at3g08970 : 422.0) J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.; ATERDJ3A; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Thioredoxin-like fold (InterPro:IPR012336), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 29746 Blast hits to 27935 proteins in 3434 species: Archae - 203; Bacteria - 10482; Metazoa - 6798; Fungi - 2759; Plants - 3202; Viruses - 20; Other Eukaryotes - 6282 (source: NCBI BLink). & (gnl|cdd|30832 : 124.0) no description available & (gnl|cdd|35932 : 107.0) no description available & (reliability: 844.0) & (original description: Putative ERDJ3A, Description = DnaJ protein ERDJ3A, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03252_207130-209864' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 128.0) no description available & (gnl|cdd|35846 : 124.0) no description available & (reliability: 280.0) & (original description: Putative HSF12, Description = HSF12, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03254_1457554-1461642' '(at5g23240 : 145.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative fer, Description = Ferredoxin, PFAM = PF00226;PF13370)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03349_59153-70337' '(at3g62600 : 539.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 354.0) no description available & (gnl|cdd|30832 : 259.0) no description available & (q04960|dnjh_cucsa : 164.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1078.0) & (original description: Putative ERDJ3B, Description = DnaJ protein ERDJ3B, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03460_788090-795920' '(at1g24120 : 530.0) encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.; ARG1-like 1 (ARL1); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 24851 Blast hits to 24751 proteins in 3316 species: Archae - 174; Bacteria - 9800; Metazoa - 4410; Fungi - 2460; Plants - 2464; Viruses - 13; Other Eukaryotes - 5530 (source: NCBI BLink). & (gnl|cdd|35932 : 296.0) no description available & (gnl|cdd|30832 : 108.0) no description available & (reliability: 1060.0) & (original description: Putative ATJ16, Description = Chaperone protein dnaJ 16, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03478_91404-95028' '(at1g71000 : 131.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G56300.1); Has 22656 Blast hits to 22652 proteins in 3192 species: Archae - 173; Bacteria - 9479; Metazoa - 3801; Fungi - 1926; Plants - 2253; Viruses - 10; Other Eukaryotes - 5014 (source: NCBI BLink). & (gnl|cdd|30832 : 103.0) no description available & (gnl|cdd|35932 : 82.4) no description available & (reliability: 262.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03518_487612-495873' '(at1g67970 : 215.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A8 (HSFA8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2085 Blast hits to 2073 proteins in 225 species: Archae - 0; Bacteria - 3; Metazoa - 333; Fungi - 465; Plants - 781; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 388.0) & (original description: Putative HSFA8, Description = Heat stress transcription factor A-8, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03634_952361-959292' '(at5g06410 : 212.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, chaperone binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock cognate protein B, C-terminal oligomerisation (InterPro:IPR009073), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Co-chaperone Hsc20 (InterPro:IPR004640); Has 1884 Blast hits to 1884 proteins in 890 species: Archae - 0; Bacteria - 1464; Metazoa - 116; Fungi - 101; Plants - 38; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|38402 : 139.0) no description available & (gnl|cdd|81420 : 91.1) no description available & (reliability: 424.0) & (original description: Putative At5g06410, Description = Molecular chaperone HscB, PFAM = PF07743;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03651_520607-535074' '(at5g12430 : 548.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 143.0) no description available & (reliability: 1082.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03662_39836-44558' '(at5g16820 : 339.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 229.0) no description available & (gnl|cdd|35846 : 213.0) no description available & (reliability: 678.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03738_150501-153085' '(p19243|hsp11_pea : 105.0) 18.1 kDa class I heat shock protein (HSP 18.1) - Pisum sativum (Garden pea) & (at2g29500 : 93.2) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 6873 Blast hits to 6873 proteins in 1575 species: Archae - 184; Bacteria - 4083; Metazoa - 80; Fungi - 309; Plants - 1622; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (gnl|cdd|84439 : 86.0) no description available & (gnl|cdd|35929 : 83.6) no description available & (reliability: 186.4) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03817_988921-1005084' '(at5g22080 : 271.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (gnl|cdd|36365 : 94.4) no description available & (reliability: 542.0) & (original description: Putative dnj27, Description = Molecular chaperone, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03817_988972-1004891' '(at5g22080 : 219.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (reliability: 438.0) & (original description: Putative dnj27, Description = BnaA10g14230D protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03817_1591044-1596217' '(q04960|dnjh_cucsa : 548.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at5g22060 : 500.0) Co-chaperonin similar to E. coli DnaJ; DNAJ homologue 2 (J2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 3 (TAIR:AT3G44110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35931 : 398.0) no description available & (gnl|cdd|30832 : 324.0) no description available & (reliability: 1000.0) & (original description: Putative dnaJ, Description = Putative DNAJ protein, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf03823_299335-303310' '(at3g14200 : 124.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 84.1) no description available & (reliability: 248.0) & (original description: Putative dnaJ, Description = Heat shock protein binding protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04040_830035-832505' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 149.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 123.0) no description available & (gnl|cdd|35929 : 119.0) no description available & (reliability: 298.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04040_833647-862021' '(p05477|hsp21_soybn : 204.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 147.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 116.0) no description available & (reliability: 294.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04040_988311-990790' '(q01545|hsp22_iponi : 174.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 152.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35929 : 110.0) no description available & (gnl|cdd|84439 : 109.0) no description available & (reliability: 304.0) & (original description: Putative hsp2, Description = Small heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04083_417043-422490' '(q03685|bip5_tobac : 1122.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1080.0) no description available & (at5g42020 : 1053.0) Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.; luminal binding protein (BIP); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, polar nucleus fusion, response to endoplasmic reticulum stress; LOCATED IN: in 8 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 34912 Blast hits to 34423 proteins in 4667 species: Archae - 159; Bacteria - 17150; Metazoa - 3676; Fungi - 1797; Plants - 1301; Viruses - 340; Other Eukaryotes - 10489 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2106.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04091_33537-37037' '(at5g51440 : 125.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 113.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 84.1) no description available & (reliability: 250.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04096_617112-620203' '(at4g11660 : 250.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 500.0) & (original description: Putative HSFB2A, Description = Heat stress transcription factor B-2a, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04122_729703-732902' '(gnl|cdd|84779 : 110.0) no description available & (at5g03720 : 102.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 101.0) no description available & (reliability: 199.6) & (original description: Putative HS1, Description = Heat shock transcription factor A3, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04171_341843-344304' '(at2g17880 : 117.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 82.6) no description available & (reliability: 234.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04187_69794-79189' '(at2g04030 : 1105.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (gnl|cdd|35242 : 730.0) no description available & (gnl|cdd|81471 : 668.0) no description available & (p36183|enpl_horvu : 522.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (reliability: 2210.0) & (original description: Putative HSP90C, Description = Heat shock protein 90C, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04216_477886-483089' '(at5g27240 : 281.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative At3g04960, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF11926;PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04220_545786-549818' '(at1g80920 : 124.0) A nuclear encoded soluble protein found in the chloroplast stroma.; J8; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G05345.1); Has 10939 Blast hits to 10938 proteins in 2525 species: Archae - 126; Bacteria - 6057; Metazoa - 1338; Fungi - 591; Plants - 814; Viruses - 3; Other Eukaryotes - 2010 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative ATJ8, Description = Chaperone protein dnaJ 8, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04276_386996-390504' '(at1g56300 : 143.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to cyclopentenone; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G71000.1); Has 23532 Blast hits to 23527 proteins in 3290 species: Archae - 175; Bacteria - 9754; Metazoa - 3953; Fungi - 2136; Plants - 2298; Viruses - 10; Other Eukaryotes - 5206 (source: NCBI BLink). & (gnl|cdd|30832 : 96.8) no description available & (gnl|cdd|35931 : 81.9) no description available & (reliability: 286.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04313_110371-115747' '(at4g36990 : 241.0) encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.; heat shock factor 4 (HSF4); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cyclopentenone, response to heat; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2101 Blast hits to 2087 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 340; Fungi - 475; Plants - 774; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (gnl|cdd|84779 : 152.0) no description available & (gnl|cdd|35846 : 149.0) no description available & (reliability: 482.0) & (original description: Putative HSF24, Description = Heat shock factor protein HSF24, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04331_900088-905176' '(p35016|enpl_catro : 1181.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1135.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 978.0) no description available & (gnl|cdd|84591 : 678.0) no description available & (reliability: 2270.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04410_1044347-1050518' '(at1g74310 : 1377.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1327.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 888.0) no description available & (gnl|cdd|36269 : 818.0) no description available & (reliability: 2754.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF10431;PF00004;PF02861;PF02861;PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04424_381226-387588' '(at1g79920 : 1224.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 851.0) no description available & (gnl|cdd|84440 : 426.0) no description available & (p09189|hsp7c_pethy : 261.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2448.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04432_262074-267236' '(at5g27240 : 367.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84624 : 80.6) no description available & (reliability: 734.0) & (original description: Putative DNAJB5, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF00226;PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04473_99484-102771' '(at2g27140 : 81.6) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G20970.1); Has 712 Blast hits to 708 proteins in 96 species: Archae - 0; Bacteria - 37; Metazoa - 7; Fungi - 2; Plants - 649; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400008714, Description = Small heat-shock protein, putative, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04490_1769-5247' '(p09189|hsp7c_pethy : 830.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 795.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35324 : 665.0) no description available & (gnl|cdd|84440 : 650.0) no description available & (reliability: 1590.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04663_439870-444467' '(at5g25530 : 415.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 215.0) no description available & (gnl|cdd|35933 : 201.0) no description available & (q04960|dnjh_cucsa : 95.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 830.0) & (original description: Putative DNAJB4, Description = DnaJ homolog subfamily B member 4, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04706_269890-272975' '(at2g01710 : 145.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = , PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04717_35521-40690' '(at3g52490 : 644.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 405.0) no description available & (reliability: 1288.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04731_221087-232765' '(at2g18465 : 97.8) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G42080.1); Has 909 Blast hits to 907 proteins in 206 species: Archae - 6; Bacteria - 183; Metazoa - 307; Fungi - 24; Plants - 167; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400003989, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04738_655337-659917' '(q04960|dnjh_cucsa : 546.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 510.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 394.0) no description available & (gnl|cdd|30832 : 310.0) no description available & (reliability: 1020.0) & (original description: Putative ddj1, Description = DnaJ homolog subfamily A member 4, PFAM = PF00684;PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04739_269463-274526' '(at5g56030 : 1046.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1045.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 830.0) no description available & (gnl|cdd|84591 : 760.0) no description available & (reliability: 2092.0) & (original description: Putative hspD, Description = Heat shock cognate 90 kDa protein, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04785_239250-244744' '(at5g27240 : 409.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84624 : 83.6) no description available & (reliability: 818.0) & (original description: Putative dnaJ, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF11926;PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04886_548247-553178' '(p09189|hsp7c_pethy : 1096.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2184.0) & (original description: Putative hsp70, Description = 70kDa heat shock protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04894_99179-109522' '(at4g16660 : 1036.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35327 : 566.0) no description available & (gnl|cdd|84440 : 275.0) no description available & (p09189|hsp7c_pethy : 211.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2072.0) & (original description: Putative hsp70G, Description = Heat shock 70 kDa protein 17, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf04899_98145-103240' '(at5g62020 : 127.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|35846 : 119.0) no description available & (gnl|cdd|84779 : 118.0) no description available & (reliability: 242.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05005_452576-457736' '(at3g52490 : 679.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 438.0) no description available & (reliability: 1358.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05056_84755-87845' '(at4g11660 : 253.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 159.0) no description available & (gnl|cdd|84779 : 146.0) no description available & (reliability: 506.0) & (original description: Putative HSFB2B, Description = Heat stress transcription factor B-2b, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05146_455819-458460' '(at5g03030 : 135.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G35795.1); Has 904 Blast hits to 904 proteins in 304 species: Archae - 0; Bacteria - 188; Metazoa - 208; Fungi - 196; Plants - 87; Viruses - 5; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|35942 : 127.0) no description available & (reliability: 270.0) & (original description: Putative tim14, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05147_158018-161064' '(at5g49060 : 304.0) FUNCTIONS IN: protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) (TAIR:AT3G57340.2); Has 23804 Blast hits to 23788 proteins in 3287 species: Archae - 182; Bacteria - 9342; Metazoa - 4208; Fungi - 2292; Plants - 2452; Viruses - 18; Other Eukaryotes - 5310 (source: NCBI BLink). & (gnl|cdd|30832 : 107.0) no description available & (gnl|cdd|35939 : 85.9) no description available & (reliability: 608.0) & (original description: Putative ATJ49, Description = Chaperone protein dnaJ 49, PFAM = PF09320;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05222_522026-531361' '(at1g79940 : 890.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 353.0) no description available & (gnl|cdd|47902 : 207.0) no description available & (reliability: 1780.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05336_10051-15033' '(at2g47440 : 588.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1176.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05389_7981-13552' '(p09189|hsp7c_pethy : 1069.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1065.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 896.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05389_9797-100257' '(p09189|hsp7c_pethy : 226.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 224.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 181.0) no description available & (gnl|cdd|84440 : 163.0) no description available & (reliability: 448.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05484_254610-263975' '(at1g79030 : 755.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 17828 Blast hits to 17824 proteins in 3062 species: Archae - 123; Bacteria - 7609; Metazoa - 2994; Fungi - 1488; Plants - 1684; Viruses - 8; Other Eukaryotes - 3922 (source: NCBI BLink). & (gnl|cdd|35939 : 392.0) no description available & (gnl|cdd|84624 : 84.0) no description available & (reliability: 1510.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF14901;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05506_670687-675510' '(at3g12580 : 464.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p29357|hsp7e_spiol : 459.0) Chloroplast envelope membrane 70 kDa heat shock-related protein - Spinacia oleracea (Spinach) & (gnl|cdd|35323 : 412.0) no description available & (gnl|cdd|84440 : 378.0) no description available & (reliability: 928.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05596_50625-78353' '(at1g28210 : 464.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 362.0) no description available & (gnl|cdd|35934 : 212.0) no description available & (q04960|dnjh_cucsa : 137.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 928.0) & (original description: Putative ATJ1, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05690_110689-120775' '(at4g39150 : 405.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (gnl|cdd|35910 : 215.0) no description available & (gnl|cdd|30832 : 102.0) no description available & (reliability: 810.0) & (original description: Putative Os01g0702450, Description = Os01g0702450 protein, PFAM = PF00226;PF14308)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf05948_431223-434917' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 127.0) no description available & (gnl|cdd|35846 : 121.0) no description available & (reliability: 280.0) & (original description: Putative HSF1, Description = Heat stress transcription factor A-2, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06080_398749-419277' '(at5g48030 : 498.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 369.0) no description available & (gnl|cdd|35934 : 215.0) no description available & (q04960|dnjh_cucsa : 146.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 996.0) & (original description: Putative GFA2, Description = Chaperone protein dnaJ GFA2, mitochondrial, PFAM = PF01556;PF00226;PF00684)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06091_617973-642437' '(at1g80030 : 551.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 381.0) no description available & (gnl|cdd|35934 : 208.0) no description available & (q04960|dnjh_cucsa : 131.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1102.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06113_388339-397349' '(at1g61770 : 394.0) J domain protein.; Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 22399 Blast hits to 22393 proteins in 3184 species: Archae - 166; Bacteria - 8830; Metazoa - 4267; Fungi - 2142; Plants - 2270; Viruses - 12; Other Eukaryotes - 4712 (source: NCBI BLink). & (gnl|cdd|35941 : 300.0) no description available & (gnl|cdd|30832 : 95.3) no description available & (reliability: 788.0) & (original description: Putative C50, Description = Chaperone protein dnaJ 50, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06123_80333-87980' '(at5g03160 : 539.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (gnl|cdd|35770 : 415.0) no description available & (gnl|cdd|30832 : 139.0) no description available & (reliability: 1078.0) & (original description: Putative P58IPK, Description = DnaJ protein P58IPK homolog, PFAM = PF13432;PF13432;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06171_198155-208155' '(at4g36520 : 189.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (gnl|cdd|35652 : 159.0) no description available & (reliability: 376.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06218_297090-299572' '(at2g17880 : 90.9) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.8) no description available & (reliability: 181.8) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06436_451785-457098' '(q04960|dnjh_cucsa : 503.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 479.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 372.0) no description available & (gnl|cdd|30832 : 284.0) no description available & (reliability: 958.0) & (original description: Putative msj1, Description = DnaJ-like protein, PFAM = PF01556;PF00226;PF00684)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06501_318143-321858' '(at2g32120 : 859.0) heat-shock protein 70T-2 (HSP70T-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 23745 Blast hits to 23668 proteins in 4473 species: Archae - 147; Bacteria - 10488; Metazoa - 3198; Fungi - 1451; Plants - 1078; Viruses - 114; Other Eukaryotes - 7269 (source: NCBI BLink). & (gnl|cdd|35324 : 383.0) no description available & (gnl|cdd|84440 : 327.0) no description available & (p09189|hsp7c_pethy : 308.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1718.0) & (original description: Putative HSP70-8, Description = Heat shock 70 kDa protein 8, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06684_100879-105522' '(p51819|hsp83_iponi : 1111.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g52640 : 1090.0) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.; heat shock protein 90.1 (HSP90.1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: defense response to bacterium, response to heat, response to arsenic; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35242 : 842.0) no description available & (gnl|cdd|84591 : 750.0) no description available & (reliability: 2180.0) & (original description: Putative HSP83A, Description = Heat shock protein 83, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06698_388794-402194' '(at1g21080 : 541.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1). & (gnl|cdd|35910 : 246.0) no description available & (gnl|cdd|30832 : 102.0) no description available & (reliability: 1082.0) & (original description: Putative ATJ10, Description = Chaperone protein dnaJ 10, PFAM = PF00226;PF14308)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06793_322988-328651' '(at5g21430 : 145.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 33 Blast hits to 33 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative ndhU, Description = NAD(P)H-quinone oxidoreductase subunit U, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06829_264818-266750' '(at5g27240 : 152.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative PGSC0003DMG400021290, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF11926)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf06902_11303-16129' '(at5g23590 : 266.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), RNA recognition motif, RNP-1 (InterPro:IPR000504), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 16747 Blast hits to 16541 proteins in 2695 species: Archae - 126; Bacteria - 6883; Metazoa - 3195; Fungi - 1541; Plants - 1234; Viruses - 13; Other Eukaryotes - 3755 (source: NCBI BLink). & (gnl|cdd|35910 : 115.0) no description available & (reliability: 532.0) & (original description: Putative At5g23590, Description = At5g23590, PFAM = PF00226;PF00076)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07019_20836-23375' '(at2g17880 : 113.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.0) no description available & (gnl|cdd|35932 : 82.0) no description available & (reliability: 226.0) & (original description: Putative ATJ11, Description = Chaperone protein dnaJ 11, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07121_49217-58769' '(at2g42080 : 120.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G58020.1); Has 1438 Blast hits to 1435 proteins in 312 species: Archae - 0; Bacteria - 313; Metazoa - 345; Fungi - 73; Plants - 359; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At2g42080, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07184_296293-303408' '(at5g49580 : 489.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 305.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 978.0) & (original description: Putative At5g49580, Description = Chaperone DnaJ-domain containing protein, PFAM = PF14901;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07321_99014-101547' '(p30236|hsp41_soybn : 139.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 138.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 108.0) no description available & (gnl|cdd|35929 : 102.0) no description available & (reliability: 276.0) & (original description: Putative shsp, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07391_489626-492589' '(at4g11660 : 108.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative HSFB2, Description = Heat shock transcription factor, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07475_22945-29036' '(at1g77020 : 530.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1); Has 22982 Blast hits to 22863 proteins in 3207 species: Archae - 174; Bacteria - 9243; Metazoa - 3904; Fungi - 2258; Plants - 2332; Viruses - 18; Other Eukaryotes - 5053 (source: NCBI BLink). & (gnl|cdd|35910 : 209.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (reliability: 1060.0) & (original description: Putative At1g77020, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF00226;PF14308)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07509_152256-155556' '(at4g18880 : 279.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 168.0) no description available & (gnl|cdd|84779 : 163.0) no description available & (reliability: 558.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07585_54810-60828' '(at2g22360 : 583.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 426.0) no description available & (gnl|cdd|35934 : 244.0) no description available & (q04960|dnjh_cucsa : 136.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1166.0) & (original description: Putative DJA6, Description = Chaperone protein dnaJ A6, chloroplastic, PFAM = PF00684;PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07722_86119-90158' '(at5g23240 : 432.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35935 : 154.0) no description available & (reliability: 864.0) & (original description: Putative At5g23240, Description = At5g23240, PFAM = PF13370;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07786_57813-71642' '(at2g22360 : 578.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 411.0) no description available & (gnl|cdd|35934 : 239.0) no description available & (q04960|dnjh_cucsa : 141.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1156.0) & (original description: Putative DJA6, Description = Chaperone protein dnaJ A6, chloroplastic, PFAM = PF00684;PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07790_395182-397767' '(at4g21870 : 121.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 2331 Blast hits to 2331 proteins in 523 species: Archae - 47; Bacteria - 802; Metazoa - 2; Fungi - 44; Plants - 1239; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (p04793|hsp13_soybn : 83.6) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (reliability: 242.0) & (original description: Putative HSP15.4, Description = 15.4 kDa class V heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf07875_59378-63969' '(at1g59725 : 355.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|30832 : 187.0) no description available & (gnl|cdd|35931 : 177.0) no description available & (q04960|dnjh_cucsa : 96.7) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 710.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08030_245216-248538' '(at5g20970 : 85.9) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G27140.1); Has 958 Blast hits to 958 proteins in 129 species: Archae - 8; Bacteria - 64; Metazoa - 1; Fungi - 0; Plants - 877; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PGSC0003DMG400008714, Description = Small heat-shock protein, putative, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08149_58066-66518' '(at5g16820 : 345.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 205.0) no description available & (gnl|cdd|84779 : 198.0) no description available & (reliability: 690.0) & (original description: Putative HSFA1, Description = Heat stress transcription factor A-1, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08182_281770-284264' '(at3g13310 : 96.7) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 81.0) no description available & (reliability: 193.4) & (original description: Putative At3g13310, Description = At3g13310, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08182_290515-293015' '(at3g13310 : 102.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 90.7) no description available & (reliability: 204.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08206_90799-93847' '(p30222|hs22c_pethy : 301.0) Small heat shock protein, chloroplast precursor - Petunia hybrida (Petunia) & (at4g27670 : 201.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|84439 : 116.0) no description available & (gnl|cdd|35929 : 97.5) no description available & (reliability: 402.0) & (original description: Putative HSP22, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08249_333573-342439' '(at5g59610 : 193.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 94.5) no description available & (gnl|cdd|35934 : 81.3) no description available & (reliability: 386.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08338_195730-223380' '(at1g11660 : 970.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink). & (gnl|cdd|35326 : 756.0) no description available & (gnl|cdd|84440 : 440.0) no description available & (p09189|hsp7c_pethy : 269.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1940.0) & (original description: Putative hsp70E, Description = Heat shock protein 70 family, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08390_283105-285683' '(p30236|hsp41_soybn : 141.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 134.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 100.0) no description available & (reliability: 268.0) & (original description: Putative shsp, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08549_29297-31283' '(at5g59720 : 156.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p31673|hsp21_orysa : 147.0) 17.4 kDa class I heat shock protein 1 - Oryza sativa (Rice) & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 104.0) no description available & (reliability: 312.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08549_75786-86116' '(at5g59720 : 183.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27880|hsp12_medsa : 182.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 105.0) no description available & (reliability: 366.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08580_49579-53088' '(at2g35795 : 140.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 137.0) no description available & (reliability: 280.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08590_10541-15904' '(q03685|bip5_tobac : 1123.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1078.0) no description available & (at5g42020 : 1051.0) Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.; luminal binding protein (BIP); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, polar nucleus fusion, response to endoplasmic reticulum stress; LOCATED IN: in 8 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 34912 Blast hits to 34423 proteins in 4667 species: Archae - 159; Bacteria - 17150; Metazoa - 3676; Fungi - 1797; Plants - 1301; Viruses - 340; Other Eukaryotes - 10489 (source: NCBI BLink). & (gnl|cdd|84440 : 853.0) no description available & (reliability: 2102.0) & (original description: Putative HSC70, Description = Luminal-binding protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08606_96254-100416' '(at5g64360 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08621_333564-336154' '(p30236|hsp41_soybn : 153.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 140.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 95.3) no description available & (reliability: 280.0) & (original description: Putative sHSP22.7, Description = 22.7 kDa class IV heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08680_173702-182144' '(at5g15450 : 1485.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 954.0) no description available & (gnl|cdd|36269 : 853.0) no description available & (q6f2y7|hs101_orysa : 763.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2970.0) & (original description: Putative CLPB3, Description = Chaperone protein ClpB3, chloroplastic, PFAM = PF02861;PF02861;PF00004;PF07724;PF10431)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08683_5837-8850' '(at1g54050 : 133.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 4491 Blast hits to 4491 proteins in 1181 species: Archae - 166; Bacteria - 2520; Metazoa - 2; Fungi - 140; Plants - 1242; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (p05477|hsp21_soybn : 94.7) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (gnl|cdd|35929 : 84.4) no description available & (gnl|cdd|84439 : 84.1) no description available & (reliability: 266.0) & (original description: Putative hsp2, Description = 17.2 kDa class II heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08804_291695-301940' '(at3g17830 : 406.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 28823 Blast hits to 28018 proteins in 3494 species: Archae - 196; Bacteria - 10926; Metazoa - 4489; Fungi - 2504; Plants - 2754; Viruses - 18; Other Eukaryotes - 7936 (source: NCBI BLink). & (gnl|cdd|30832 : 346.0) no description available & (gnl|cdd|35934 : 202.0) no description available & (q04960|dnjh_cucsa : 108.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 812.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00684;PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf08806_120339-132738' '(p09886|hs21c_pea : 145.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 136.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 89.5) no description available & (reliability: 272.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09262_128148-131194' '(at1g53540 : 189.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (p05478|hsp16_soybn : 186.0) 18.5 kDa class I heat shock protein (HSP 18.5) - Glycine max (Soybean) & (gnl|cdd|84439 : 118.0) no description available & (gnl|cdd|35929 : 114.0) no description available & (reliability: 378.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09345_64527-67057' '(at2g17880 : 112.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.0) no description available & (reliability: 224.0) & (original description: Putative ATJ11, Description = Chaperone protein dnaJ 11, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09471_38020-40445' '(p04795|hsp15_soybn : 137.0) 17.6 kDa class I heat shock protein (HSP 17.6-L) - Glycine max (Soybean) & (at2g29500 : 130.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 6873 Blast hits to 6873 proteins in 1575 species: Archae - 184; Bacteria - 4083; Metazoa - 80; Fungi - 309; Plants - 1622; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (gnl|cdd|84439 : 94.9) no description available & (gnl|cdd|35929 : 91.7) no description available & (reliability: 260.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09552_125649-131214' '(q02028|hsp7s_pea : 1038.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g24280 : 1015.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 829.0) no description available & (reliability: 2030.0) & (original description: Putative HSP70, Description = Stromal 70 kDa heat shock-related protein, chloroplastic, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09554_197090-210764' '(at5g15450 : 1481.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 951.0) no description available & (gnl|cdd|36269 : 848.0) no description available & (q6f2y7|hs101_orysa : 756.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2962.0) & (original description: Putative CLPB3, Description = Chaperone protein ClpB3, chloroplastic, PFAM = PF00004;PF10431;PF07724;PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09649_281479-284576' '(at1g53540 : 126.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (q84q77|hsp23_orysa : 114.0) 17.4 kDa class I heat shock protein 3 - Oryza sativa (Rice) & (gnl|cdd|35929 : 113.0) no description available & (gnl|cdd|84439 : 111.0) no description available & (reliability: 252.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09774_201267-206685' '(at2g20560 : 370.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 221.0) no description available & (gnl|cdd|35933 : 212.0) no description available & (q04960|dnjh_cucsa : 93.6) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 740.0) & (original description: Putative v1g233916, Description = Predicted protein, PFAM = PF01556;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09928_108522-110025' '(p09189|hsp7c_pethy : 180.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at1g16030 : 176.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 146.0) no description available & (gnl|cdd|84440 : 101.0) no description available & (reliability: 352.0) & (original description: Putative Hsp70, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09928_110026-111838' '(p26413|hsp70_soybn : 424.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at3g12580 : 422.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 394.0) no description available & (gnl|cdd|35324 : 385.0) no description available & (reliability: 844.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09973_22124-26138' '(p04793|hsp13_soybn : 189.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at1g07400 : 179.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 113.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 358.0) & (original description: Putative Hsp3, Description = Heat shock protein 3, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09973_51080-53538' '(p02519|hsp11_soybn : 201.0) 17.3 kDa class I heat shock protein (HSP 17.3) - Glycine max (Soybean) & (at1g07400 : 184.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 115.0) no description available & (gnl|cdd|35929 : 111.0) no description available & (reliability: 368.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf09973_59077-61553' '(p27880|hsp12_medsa : 187.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (at3g46230 : 178.0) member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds; heat shock protein 17.4 (HSP17.4); INVOLVED IN: response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 7056 Blast hits to 7055 proteins in 1590 species: Archae - 177; Bacteria - 4281; Metazoa - 88; Fungi - 291; Plants - 1609; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|35929 : 115.0) no description available & (gnl|cdd|84439 : 105.0) no description available & (reliability: 356.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10036_41080-64608' '(at1g79920 : 335.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 274.0) no description available & (gnl|cdd|84440 : 210.0) no description available & (p09189|hsp7c_pethy : 147.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 670.0) & (original description: Putative hspH, Description = 97 kDa heat shock protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10036_66360-69204' '(at1g79920 : 168.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative HSP70, Description = Heat shock 70 kDa protein 14, PFAM = )' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10144_114937-119313' '(at3g05345 : 295.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF00226;PF13459)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10384_22813-25271' '(p04793|hsp13_soybn : 206.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at1g07400 : 184.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 114.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 368.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10502_230796-235021' '(at5g53150 : 422.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 84.4) no description available & (reliability: 844.0) & (original description: Putative hsp40, Description = DnaJ subfamily B member, PFAM = PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10528_59752-63920' '(at1g11040 : 220.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|30832 : 99.0) no description available & (gnl|cdd|35931 : 97.7) no description available & (reliability: 440.0) & (original description: Putative hsp40, Description = DnaJ homolog subfamily B member 13, PFAM = PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf10796_49317-54952' '(at5g56030 : 1048.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1044.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 831.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2096.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf11334_206108-212818' '(at3g12170 : 275.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: J-domain protein 6 (TAIR:AT5G06910.1); Has 23895 Blast hits to 23888 proteins in 3317 species: Archae - 171; Bacteria - 9423; Metazoa - 4258; Fungi - 2263; Plants - 2420; Viruses - 67; Other Eukaryotes - 5293 (source: NCBI BLink). & (gnl|cdd|35938 : 202.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 550.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf11364_126433-130942' '(at4g13830 : 175.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 89.5) no description available & (reliability: 350.0) & (original description: Putative C20, Description = Chaperone protein dnaJ 20, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf11512_237005-240764' '(at2g26150 : 236.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 164.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 472.0) & (original description: Putative Hsf1, Description = Heat shock factor, PFAM = PF00447)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf11552_400477-404951' '(at2g20560 : 373.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 208.0) no description available & (gnl|cdd|35933 : 204.0) no description available & (q04960|dnjh_cucsa : 99.8) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 746.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf12154_125691-130836' '(at5g02500 : 1067.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 1067.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|35323 : 895.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2134.0) & (original description: Putative LIM18, Description = HSP70, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf12405_82583-131733' '(at2g25140 : 1366.0) Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.; casein lytic proteinase B4 (CLPB4); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to heat; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B3 (TAIR:AT5G15450.1); Has 30488 Blast hits to 27328 proteins in 3166 species: Archae - 421; Bacteria - 19864; Metazoa - 870; Fungi - 613; Plants - 740; Viruses - 7; Other Eukaryotes - 7973 (source: NCBI BLink). & (gnl|cdd|30888 : 940.0) no description available & (gnl|cdd|36269 : 828.0) no description available & (q6f2y7|hs101_orysa : 743.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2732.0) & (original description: Putative clpB, Description = ClpB, PFAM = PF10431;PF02861;PF02861;PF00004;PF07724)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf12424_161640-168411' '(at5g06910 : 290.0) DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.; J-domain protein 6 (ATJ6); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G12170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35938 : 214.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (reliability: 580.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf12868_62121-66949' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1094.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 890.0) no description available & (reliability: 2188.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf13748_72301-75418' '(at4g09350 : 241.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink). & (gnl|cdd|30832 : 82.6) no description available & (reliability: 482.0) & (original description: Putative dnaJ, Description = Chaperone DnaJ-domain superfamily protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf13748_72549-74616' '(at4g09350 : 245.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink). & (gnl|cdd|30832 : 83.0) no description available & (reliability: 490.0) & (original description: Putative ndhT, Description = NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf14115_178656-184799' '(at2g35540 : 216.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G25560.1); Has 8542 Blast hits to 8312 proteins in 1764 species: Archae - 53; Bacteria - 3482; Metazoa - 1739; Fungi - 476; Plants - 1179; Viruses - 0; Other Eukaryotes - 1613 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At2g35540, Description = Chaperone protein dnaJ 49, PFAM = PF11926;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf14282_182698-189170' '(at5g16650 : 132.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35935 : 80.1) no description available & (reliability: 264.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf14394_203640-212483' '(q03684|bip4_tobac : 1083.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1080.0) no description available & (at5g28540 : 1053.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2106.0) & (original description: Putative grp78, Description = Glucose-regulated protein 78, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf15104_32692-40013' '(at5g49580 : 496.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 304.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 992.0) & (original description: Putative At5g49580, Description = Chaperone DnaJ-domain containing protein, PFAM = PF14901;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf15166_304993-309910' '(p33126|hsp81_orysa : 1045.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (at5g56030 : 1044.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (gnl|cdd|35242 : 827.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2088.0) & (original description: Putative hsp90, Description = Chaperone HSP90, PFAM = PF00183;PF02518)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf15536_241118-247654' '(gnl|cdd|35323 : 1079.0) no description available & (q03684|bip4_tobac : 1077.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 1050.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2100.0) & (original description: Putative bip, Description = Luminal binding protein, BiP, PFAM = PF00012)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf15972_131464-137770' '(at1g74310 : 1391.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1344.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 888.0) no description available & (gnl|cdd|36269 : 824.0) no description available & (reliability: 2782.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF10431;PF07724;PF00004;PF02861;PF02861)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf15972_203904-209490' '(at1g74250 : 393.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (gnl|cdd|35936 : 304.0) no description available & (reliability: 786.0) & (original description: Putative JJJ1, Description = DNAJ protein JJJ1 homolog, PFAM = PF00226;PF12171)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf18985_4401-7447' '(at3g57340 : 287.0) FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G05750.1); Has 24356 Blast hits to 24336 proteins in 3323 species: Archae - 190; Bacteria - 9449; Metazoa - 4326; Fungi - 2357; Plants - 2505; Viruses - 22; Other Eukaryotes - 5507 (source: NCBI BLink). & (gnl|cdd|30832 : 104.0) no description available & (reliability: 574.0) & (original description: Putative ATJ49, Description = Chaperone protein dnaJ 49, PFAM = PF09320;PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf21560_214543-242826' '(q01545|hsp22_iponi : 146.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 132.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 100.0) no description available & (gnl|cdd|35929 : 94.0) no description available & (reliability: 264.0) & (original description: Putative hsp2, Description = 17.6 kDa class II heat shock protein, PFAM = PF00011)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf24355_41171-52261' '(at4g07990 : 194.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1). & (reliability: 388.0) & (original description: Putative BnaC03g27990D, Description = BnaC03g27990D protein, PFAM = PF00226)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf27914_1890-9435' '(p35016|enpl_catro : 1187.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1139.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 977.0) no description available & (gnl|cdd|84591 : 672.0) no description available & (reliability: 2278.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf30670_93228-102977' '(at2g42750 : 428.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 17700 Blast hits to 17698 proteins in 3061 species: Archae - 180; Bacteria - 8514; Metazoa - 2668; Fungi - 1485; Plants - 1554; Viruses - 15; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|35935 : 161.0) no description available & (gnl|cdd|84624 : 81.0) no description available & (reliability: 856.0) & (original description: Putative dnj38, Description = Chloroplast heat shock protein-binding protein, PFAM = PF00226;PF13370)' T
'20.2.1' 'stress.abiotic.heat' 'niben101scf34129_4441-8140' '(at5g54660 : 181.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative HSP21.7, Description = 21.7 kDa class VI heat shock protein, PFAM = PF00011)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold1502_66799-69345' '(gnl|cdd|84686 : 87.2) no description available & (at4g36020 : 86.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00098;PF00098;PF00098;PF00313)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold15192_7458-12651' '(at3g55990 : 566.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 1132.0) & (original description: Putative TBL28, Description = Protein trichome birefringence-like 28, PFAM = PF14416;PF13839)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold16654_5350-9666' '(at2g33320 : 228.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold17459_4493-8829' '(at3g55990 : 290.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 143.0) no description available & (reliability: 580.0) & (original description: Putative Os05g0587700, Description = Os05g0587700 protein, PFAM = PF14416;PF13839)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold18206_9193-21529' '(gnl|cdd|29388 : 266.0) no description available & (at5g17820 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 177.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 336.0) & (original description: Putative prx34, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold31907_7349-10602' '(at5g12300 : 222.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G55530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold34338_13585-17594' '(at2g33320 : 221.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold36760_8261-12525' '(at2g33320 : 224.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 172.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold76876_4344-7138' '(at5g23950 : 146.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold77959_5950-7569' '(at1g05260 : 224.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 189.0) no description available & (p37834|per1_orysa : 176.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 448.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold108878_536-3057' '(gnl|cdd|29388 : 129.0) no description available & (at4g11290 : 105.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37834|per1_orysa : 98.6) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold1381_159875-163062' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold2291_127507-131833' '(at2g33320 : 219.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 185.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00003840ctg012_4402-7082' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|36139 : 86.5) no description available & (at4g38680 : 85.9) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 171.8) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00313;PF00098;PF00098)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00009119ctg003_10168-14725' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00010803ctg003_1-4278' '(at3g55990 : 341.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative ESK1, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF14416;PF13839)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 466.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00024562ctg004_20041-23897' '(at1g05260 : 428.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 421.0) no description available & (p37834|per1_orysa : 333.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00032616ctg002_1200-4693' '(gnl|cdd|29388 : 135.0) no description available & (at4g33870 : 109.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 105.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 212.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00037141ctg001_18787-22968' '(gnl|cdd|29388 : 330.0) no description available & (at4g11290 : 232.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 222.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 426.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00039906ctg003_1514-5037' '(at5g55530 : 350.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben044scf00044656ctg003_1-8743' '(gnl|cdd|35494 : 219.0) no description available & (at5g67320 : 163.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein ebi, PFAM = PF08513;PF00400;PF00400)' T
'20.2.2' 'stress.abiotic.cold' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00159_688439-691641' '(at5g55530 : 277.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00308_61291-65015' '(gnl|cdd|29388 : 414.0) no description available & (at3g21770 : 275.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, nucleus, plant-type cell wall, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 4451 Blast hits to 4425 proteins in 278 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 123; Plants - 4268; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p37834|per1_orysa : 265.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 544.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 464.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00595_91654-94637' '(at5g23950 : 145.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00683_264493-267776' '(at5g55530 : 357.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf00773_874246-881028' '(at3g55990 : 599.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 170.0) no description available & (reliability: 1198.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF13839;PF14416)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf01037_281173-284764' '(at1g05260 : 433.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 415.0) no description available & (p37834|per1_orysa : 322.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 866.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf01230_250993-254852' '(gnl|cdd|29388 : 353.0) no description available & (at3g03670 : 235.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 227.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 428.0) & (original description: Putative px1, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf01380_301847-312064' '(gnl|cdd|29388 : 311.0) no description available & (at4g33870 : 218.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22195|per1_arahy : 186.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 400.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 468.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02039_289520-292650' '(at1g04540 : 135.0) Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At1g04540, Description = T6K12.2 protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02054_219381-241732' '(at2g33320 : 177.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02344_434351-437639' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02583_690083-692913' '(at4g36020 : 91.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (gnl|cdd|84686 : 84.1) no description available & (reliability: 182.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00098;PF00098;PF00313)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02601_323262-327271' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02606_678330-683212' '(at2g33320 : 160.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 171.0) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf02968_675414-678213' '(at1g05260 : 179.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 168.0) no description available & (p37834|per1_orysa : 137.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 358.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf03077_4795-18699' '(gnl|cdd|35494 : 586.0) no description available & (at5g67320 : 554.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 245.0) no description available & (p93107|pf20_chlre : 117.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1108.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf03526_198627-202891' '(at2g33320 : 199.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf03565_399990-402784' '(at5g23950 : 147.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf03779_325397-331455' '(at3g55990 : 637.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF14416;PF13839)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf03905_308295-324920' '(at3g17020 : 234.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 3326 Blast hits to 3271 proteins in 769 species: Archae - 372; Bacteria - 2020; Metazoa - 115; Fungi - 79; Plants - 685; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|30165 : 85.2) no description available & (reliability: 468.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf04220_329346-332809' '(at1g05260 : 418.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p37834|per1_orysa : 331.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 836.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 172.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf04669_347329-351384' '(at3g12060 : 280.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 1 (TBL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1); Has 1352 Blast hits to 1335 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1346; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 153.0) no description available & (reliability: 536.0) & (original description: Putative Os05g0587700, Description = Os05g0587700 protein, PFAM = PF14416;PF13839)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf04854_234361-254148' '(gnl|cdd|35494 : 592.0) no description available & (at5g67320 : 561.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 241.0) no description available & (p93107|pf20_chlre : 114.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1122.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf04995_925385-947965' '(gnl|cdd|35494 : 457.0) no description available & (at5g67320 : 445.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 187.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 890.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08513)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf06204_59128-62411' '(at5g55530 : 360.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf06602_52476-55975' '(at1g05260 : 460.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p37834|per1_orysa : 349.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 920.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf06883_56335-59172' '(at3g53990 : 238.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 85.6) no description available & (reliability: 476.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf06883_100868-104845' '(at3g53990 : 239.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 90.6) no description available & (reliability: 478.0) & (original description: Putative enod18, Description = Early nodulin ENOD18, PFAM = PF00582)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf07163_252328-255623' '(at5g55530 : 401.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf07388_53558-56999' '(at1g05260 : 431.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 418.0) no description available & (p37834|per1_orysa : 334.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative PER30, Description = Peroxidase 30, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf07709_79544-84057' '(gnl|cdd|69104 : 247.0) no description available & (at3g50830 : 214.0) cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable.; cold-regulated 413-plasma membrane 2 (COR413-PM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892); BEST Arabidopsis thaliana protein match is: Cold acclimation protein WCOR413 family (TAIR:AT4G37220.1); Has 158 Blast hits to 155 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative At4g37220, Description = Cold-regulated 413 plasma membrane protein 4, PFAM = PF05562)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf07713_69645-72850' '(at5g55530 : 281.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf10162_181972-186153' '(gnl|cdd|29388 : 326.0) no description available & (at4g11290 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 422.0) & (original description: Putative PRX70, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf12797_61474-66626' '(at3g55990 : 565.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 1130.0) & (original description: Putative Os12g0104700, Description = Expressed protein, PFAM = PF13839;PF14416)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf15048_49566-52347' '(at5g55530 : 375.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf18531_146609-149423' '(at3g53990 : 139.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative USP1, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00582)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf20924_190174-193455' '(at1g05260 : 287.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 237.0) no description available & (p37834|per1_orysa : 223.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'20.2.2' 'stress.abiotic.cold' 'niben101scf37031_116869-121065' '(at3g55990 : 604.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 187.0) no description available & (reliability: 1208.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF14416;PF13839)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold5718_7825-10433' '(at2g41430 : 99.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 198.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold7962_1-6637' '(at1g19430 : 823.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 8058 Blast hits to 6201 proteins in 616 species: Archae - 19; Bacteria - 712; Metazoa - 2431; Fungi - 867; Plants - 1254; Viruses - 124; Other Eukaryotes - 2651 (source: NCBI BLink). & (gnl|cdd|66793 : 621.0) no description available & (reliability: 1646.0) & (original description: Putative At1g19430, Description = Probable methyltransferase PMT28, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold10348_25864-43368' '(at5g19690 : 1168.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37503 : 1050.0) no description available & (gnl|cdd|66228 : 377.0) no description available & (reliability: 2336.0) & (original description: Putative STT3A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, PFAM = PF02516)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold14653_22354-31896' '(at2g39750 : 979.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 798.0) no description available & (reliability: 1958.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold20848_3578-13882' '(at1g26850 : 967.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 806.0) no description available & (reliability: 1934.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold24691_3288-13464' '(at4g00740 : 966.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66793 : 697.0) no description available & (reliability: 1932.0) & (original description: Putative At4g00740, Description = Probable methyltransferase PMT13, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold27862_4162-8752' '(gnl|cdd|69144 : 119.0) no description available & (at5g26990 : 94.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold31491_1-4263' '(at4g00750 : 890.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 1780.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold38883_717-13870' '(at1g60220 : 343.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 162.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 686.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold38883_4230-12047' '(at1g60220 : 181.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 92.4) no description available & (gnl|cdd|34761 : 80.9) no description available & (reliability: 362.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold43192_3627-7924' '(gnl|cdd|66831 : 314.0) no description available & (at5g25610 : 277.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 119.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 554.0) & (original description: Putative RD22, Description = BURP domain protein RD22, PFAM = PF03181)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold50673_6078-12766' '(gnl|cdd|69144 : 219.0) no description available & (at5g49230 : 186.0) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.; HYPERSENSITIVE TO RED AND BLUE (HRB1); CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G06760.1); Has 235 Blast hits to 235 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold63335_1-5789' '(at1g04430 : 1008.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 2016.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold66987_2482-8512' '(gnl|cdd|69144 : 149.0) no description available & (at3g05700 : 130.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold68098_493-9760' '(at1g60220 : 178.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 89.7) no description available & (reliability: 356.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold386_183430-189791' '(at4g00750 : 880.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 794.0) no description available & (reliability: 1760.0) & (original description: Putative At4g10440, Description = Probable methyltransferase PMT17, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold718_184925-190438' '(at3g51070 : 508.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 439.0) no description available & (reliability: 1016.0) & (original description: Putative MTR_8g093880, Description = Methyltransferase PMT26-like protein, putative, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold1022_482511-488270' '(at3g12360 : 747.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 93.2) no description available & (reliability: 1494.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF12796;PF12796;PF00023)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold2193_33073-78730' '(at1g60220 : 306.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 138.0) no description available & (gnl|cdd|34761 : 117.0) no description available & (reliability: 612.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3256_113751-117401' '(at3g23300 : 354.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 285.0) no description available & (reliability: 708.0) & (original description: Putative erd3, Description = Quasimodo 3, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3507_41812-57553' '(at3g54510 : 679.0) Early-responsive to dehydration stress protein (ERD4); LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36349 : 462.0) no description available & (gnl|cdd|66403 : 256.0) no description available & (reliability: 1358.0) & (original description: Putative At3g54510, Description = CSC1-like protein At3g54510, PFAM = PF13967;PF14703;PF02714;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3894_16269-28514' '(gnl|cdd|69144 : 140.0) no description available & (at3g05700 : 87.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold4603_211234-217986' '(at3g10200 : 773.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04060.1); Has 1192 Blast hits to 1180 proteins in 187 species: Archae - 1; Bacteria - 301; Metazoa - 2; Fungi - 2; Plants - 876; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66793 : 613.0) no description available & (reliability: 1546.0) & (original description: Putative At3g10200, Description = Probable methyltransferase PMT6, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold5750_55247-58712' '(at1g32090 : 280.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 193.0) no description available & (gnl|cdd|66403 : 177.0) no description available & (reliability: 560.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00002670ctg000_12978-22627' '(at4g22120 : 1070.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 777.0) no description available & (gnl|cdd|66403 : 445.0) no description available & (reliability: 2140.0) & (original description: Putative At3g21620, Description = CSC1-like protein At3g21620, PFAM = PF14703;PF02714;PF13967)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00004662ctg007_786-3394' '(at2g41430 : 100.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 200.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00013037ctg002_4089-5864' '(at2g39750 : 182.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 99.2) no description available & (reliability: 364.0) & (original description: Putative At2g39750, Description = Methyltransferase PMT16, putative, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00013456ctg000_987-8280' '(at1g13860 : 837.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 444.0) no description available & (reliability: 1674.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00022794ctg000_1-7509' '(at2g39750 : 1000.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 2000.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00024822ctg001_3001-11373' '(at1g78240 : 973.0) Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.; TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|66793 : 470.0) no description available & (reliability: 1946.0) & (original description: Putative QUA2, Description = Probable pectin methyltransferase QUA2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00026902ctg000_2408-8931' '(gnl|cdd|69144 : 141.0) no description available & (at3g05700 : 108.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00027807ctg000_14433-21115' '(gnl|cdd|69144 : 112.0) no description available & (at5g26990 : 84.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00028221ctg000_4814-12004' '(at4g02900 : 899.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 623.0) no description available & (gnl|cdd|66403 : 308.0) no description available & (reliability: 1798.0) & (original description: Putative At1g11960, Description = CSC1-like protein At1g11960, PFAM = PF02714;PF14703;PF13967)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00029196ctg001_12553-17153' '(at4g00750 : 842.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 780.0) no description available & (reliability: 1684.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00029270ctg004_7558-13206' '(at3g12360 : 675.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35728 : 99.7) no description available & (gnl|cdd|29261 : 94.0) no description available & (reliability: 1350.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF12796;PF12796;PF12796;PF13962)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00030432ctg009_1-7302' '(at1g32090 : 614.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 425.0) no description available & (gnl|cdd|66403 : 179.0) no description available & (reliability: 1228.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703;PF13967)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00036998ctg000_4158-7413' '(at3g09550 : 340.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 95.1) no description available & (gnl|cdd|29261 : 92.5) no description available & (reliability: 650.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF12796;PF12796)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00038165ctg006_1-2688' '(at1g32090 : 283.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 191.0) no description available & (gnl|cdd|66403 : 175.0) no description available & (reliability: 566.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00039094ctg006_1699-10033' '(at1g60220 : 179.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 89.3) no description available & (reliability: 358.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00041131ctg005_486-6516' '(at1g23010 : 772.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 141.0) no description available & (reliability: 1520.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07732;PF07731)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00043131ctg003_5666-17338' '(at4g22120 : 1074.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 785.0) no description available & (gnl|cdd|66403 : 455.0) no description available & (reliability: 2148.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00052811ctg002_1-2876' '(at3g23300 : 351.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 282.0) no description available & (reliability: 702.0) & (original description: Putative erd3, Description = Quasimodo 3, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00055635ctg003_449-6103' '(at3g51070 : 899.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 802.0) no description available & (reliability: 1798.0) & (original description: Putative At3g51070, Description = Probable methyltransferase PMT27, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00017_308988-315998' '(at5g64030 : 1006.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 795.0) no description available & (reliability: 2012.0) & (original description: Putative At5g64030, Description = Probable methyltransferase PMT26, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00133_476483-483567' '(at3g56080 : 482.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G40280.1); Has 1162 Blast hits to 1119 proteins in 165 species: Archae - 0; Bacteria - 246; Metazoa - 1; Fungi - 5; Plants - 904; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66793 : 458.0) no description available & (reliability: 964.0) & (original description: Putative At1g29470, Description = Putative methyltransferase PMT26, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00133_478273-483872' '(at3g56080 : 748.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G40280.1); Has 1162 Blast hits to 1119 proteins in 165 species: Archae - 0; Bacteria - 246; Metazoa - 1; Fungi - 5; Plants - 904; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66793 : 710.0) no description available & (reliability: 1496.0) & (original description: Putative At3g56080, Description = Probable methyltransferase PMT22, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00246_16696-19825' '(at5g62520 : 134.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; similar to RCD one 5 (SRO5); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: similar to RCD one 4 (TAIR:AT3G47720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400024600, Description = , PFAM = PF12174)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00272_889774-895969' '(at1g26850 : 1012.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 784.0) no description available & (reliability: 2024.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00358_30658-37726' '(at1g77260 : 798.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 919 Blast hits to 909 proteins in 49 species: Archae - 0; Bacteria - 17; Metazoa - 3; Fungi - 4; Plants - 891; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66793 : 696.0) no description available & (reliability: 1596.0) & (original description: Putative At1g77260, Description = Probable methyltransferase PMT10, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00501_547622-552971' '(at1g04430 : 997.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 788.0) no description available & (reliability: 1994.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00592_5733-11049' '(at2g18250 : 242.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 199.0) no description available & (gnl|cdd|28826 : 193.0) no description available & (reliability: 484.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00635_729794-735879' '(at1g13860 : 850.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 445.0) no description available & (reliability: 1700.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00821_1291272-1296746' '(at4g00750 : 845.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 779.0) no description available & (reliability: 1690.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00966_443954-450661' '(at1g26850 : 1027.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 801.0) no description available & (reliability: 2054.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01013_422681-429441' '(at1g04430 : 1015.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 2030.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01062_183671-194273' '(at4g30660 : 80.9) Low temperature and salt responsive protein family; INVOLVED IN: response to cold, hyperosmotic salinity response; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 1255 Blast hits to 1255 proteins in 413 species: Archae - 0; Bacteria - 524; Metazoa - 40; Fungi - 292; Plants - 377; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative OSR8, Description = Low temperature and salt responsive family protein, PFAM = PF01679)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01062_221556-235893' '(at4g28088 : 85.1) Low temperature and salt responsive protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative At4g30660, Description = UPF0057 membrane protein At4g30660, PFAM = PF01679)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01145_127517-132652' '(at1g31850 : 998.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G19120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 722.0) no description available & (reliability: 1996.0) & (original description: Putative At1g31850, Description = Probable methyltransferase PMT20, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01509_62812-69509' '(at4g02900 : 903.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 625.0) no description available & (gnl|cdd|66403 : 307.0) no description available & (reliability: 1806.0) & (original description: Putative At1g11960, Description = CSC1-like protein At1g11960, PFAM = PF02714;PF14703;PF13967)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01583_76073-82282' '(at4g18030 : 974.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G26850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 1948.0) & (original description: Putative At4g18030, Description = Probable methyltransferase PMT14, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01623_613103-619133' '(gnl|cdd|69144 : 148.0) no description available & (at3g05700 : 130.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01689_455998-463809' '(at3g62730 : 339.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01764_253780-258235' '(at5g62520 : 241.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; similar to RCD one 5 (SRO5); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: similar to RCD one 4 (TAIR:AT3G47720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative SRO5, Description = Probable inactive poly [ADP-ribose] polymerase SRO5, PFAM = PF12174)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01899_212112-217263' '(at1g30360 : 705.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36349 : 467.0) no description available & (gnl|cdd|35153 : 266.0) no description available & (reliability: 1410.0) & (original description: Putative ERD4, Description = CSC1-like protein ERD4, PFAM = PF13967;PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01961_391942-397473' '(at4g04340 : 392.0) ERD (early-responsive to dehydration stress) family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G22120.6); Has 1468 Blast hits to 1288 proteins in 193 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 720; Plants - 437; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36349 : 258.0) no description available & (gnl|cdd|66403 : 241.0) no description available & (reliability: 784.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02105_357140-360193' '(at3g18030 : 336.0) flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).; HAL3-like protein A (HAL3A); CONTAINS InterPro DOMAIN/s: Flavoprotein (InterPro:IPR003382); BEST Arabidopsis thaliana protein match is: Flavoprotein (TAIR:AT1G48605.1); Has 7047 Blast hits to 7045 proteins in 2495 species: Archae - 186; Bacteria - 4343; Metazoa - 125; Fungi - 269; Plants - 90; Viruses - 5; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|35891 : 250.0) no description available & (gnl|cdd|81644 : 160.0) no description available & (reliability: 672.0) & (original description: Putative HAL3A, Description = Phosphopantothenoylcysteine decarboxylase, PFAM = PF02441)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02111_33953-41907' '(gnl|cdd|69144 : 223.0) no description available & (at5g49230 : 194.0) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.; HYPERSENSITIVE TO RED AND BLUE (HRB1); CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G06760.1); Has 235 Blast hits to 235 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02299_176001-182702' '(at1g30360 : 803.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36349 : 513.0) no description available & (gnl|cdd|35153 : 296.0) no description available & (reliability: 1606.0) & (original description: Putative ERD4, Description = CSC1-like protein ERD4, PFAM = PF13967;PF02714;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02319_1326009-1330638' '(gnl|cdd|66831 : 313.0) no description available & (at5g25610 : 278.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 118.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 556.0) & (original description: Putative RD22, Description = BURP domain protein RD22, PFAM = PF03181)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02398_128020-132277' '(at1g23550 : 213.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.; similar to RCD one 2 (SRO2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 3 (TAIR:AT1G70440.1); Has 178 Blast hits to 169 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative SRO2, Description = Probable inactive poly [ADP-ribose] polymerase SRO2, PFAM = PF12174;PF00644)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02639_333441-349909' '(at3g12360 : 767.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35729 : 113.0) no description available & (gnl|cdd|29261 : 95.5) no description available & (reliability: 1534.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF12796;PF12796;PF13962;PF00023)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02772_247600-250531' '(gnl|cdd|87067 : 318.0) no description available & (at3g25780 : 244.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02942_5454-17482' '(at3g01100 : 843.0) unknown protein, has cDNAs and ESTs associated to it; hypothetical protein 1 (HYP1); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: Early-responsive to dehydration stress protein (ERD4) (TAIR:AT1G69450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36349 : 536.0) no description available & (gnl|cdd|66403 : 351.0) no description available & (reliability: 1686.0) & (original description: Putative HYP1, Description = CSC1-like protein HYP1, PFAM = PF02714;PF13967;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02945_132015-139464' '(gnl|cdd|69144 : 234.0) no description available & (at3g06760 : 186.0) Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G49230.1); Has 224 Blast hits to 224 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02953_190960-202162' '(at4g22120 : 1094.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 781.0) no description available & (gnl|cdd|66403 : 453.0) no description available & (reliability: 2188.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02994_286039-293393' '(at1g23010 : 784.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 142.0) no description available & (reliability: 1552.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07731;PF07732)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03159_34430-42066' '(at4g00750 : 906.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 781.0) no description available & (reliability: 1812.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03221_116948-125347' '(at1g34130 : 1165.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|37503 : 1114.0) no description available & (gnl|cdd|66228 : 420.0) no description available & (reliability: 2330.0) & (original description: Putative STT3B, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B, PFAM = PF02516)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03283_166009-175239' '(at3g10200 : 878.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04060.1); Has 1192 Blast hits to 1180 proteins in 187 species: Archae - 1; Bacteria - 301; Metazoa - 2; Fungi - 2; Plants - 876; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66793 : 678.0) no description available & (reliability: 1756.0) & (original description: Putative At3g10200, Description = Probable methyltransferase PMT6, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03563_110904-121385' '(at4g22120 : 1074.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 779.0) no description available & (gnl|cdd|66403 : 445.0) no description available & (reliability: 2148.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03816_338975-343780' '(gnl|cdd|69144 : 121.0) no description available & (at1g56280 : 87.0) Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal; drought-induced 19; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1). & (reliability: 174.0) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03894_572513-577377' '(at4g10440 : 922.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G33170.1); Has 1162 Blast hits to 1152 proteins in 127 species: Archae - 5; Bacteria - 186; Metazoa - 0; Fungi - 2; Plants - 957; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|66793 : 779.0) no description available & (reliability: 1844.0) & (original description: Putative At1g33170, Description = Probable methyltransferase PMT18, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03971_114742-121195' '(at2g03480 : 817.0) Encodes QUASIMODO2 LIKE2 (QUL2), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 2 (QUL2); LOCATED IN: mitochondrion; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 426.0) no description available & (reliability: 1634.0) & (original description: Putative OSU1, Description = Putative S-adenosyl-L-methionine-dependent methyltransferase, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04038_403408-406411' '(at2g41430 : 100.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 200.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04400_272409-279560' '(at1g13860 : 838.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 422.0) no description available & (reliability: 1676.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04411_221796-224430' '(at2g41430 : 111.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 222.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04592_11357-14970' '(gnl|cdd|66831 : 235.0) no description available & (at5g25610 : 186.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 101.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 372.0) & (original description: Putative rd22c, Description = RD22, PFAM = PF03181)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04610_741876-751942' '(at1g19430 : 826.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 8058 Blast hits to 6201 proteins in 616 species: Archae - 19; Bacteria - 712; Metazoa - 2431; Fungi - 867; Plants - 1254; Viruses - 124; Other Eukaryotes - 2651 (source: NCBI BLink). & (gnl|cdd|66793 : 616.0) no description available & (reliability: 1652.0) & (original description: Putative At1g19430, Description = Probable methyltransferase PMT28, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04701_287425-299216' '(at1g32090 : 958.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 675.0) no description available & (gnl|cdd|66403 : 402.0) no description available & (reliability: 1916.0) & (original description: Putative At1g32090, Description = CSC1-like protein At1g32090, PFAM = PF02714;PF13967;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04701_290965-294434' '(at1g32090 : 259.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 195.0) no description available & (gnl|cdd|66403 : 169.0) no description available & (reliability: 518.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04776_72176-80284' '(at4g02900 : 1072.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 752.0) no description available & (gnl|cdd|66403 : 408.0) no description available & (reliability: 2144.0) & (original description: Putative At4g02900, Description = CSC1-like protein At4g02900, PFAM = PF14703;PF13967;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05034_230857-236697' '(at4g00750 : 884.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 792.0) no description available & (reliability: 1768.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05062_183881-190564' '(at5g64030 : 998.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 787.0) no description available & (reliability: 1996.0) & (original description: Putative At5g64030, Description = Probable methyltransferase PMT26, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05553_126143-139621' '(at1g78240 : 943.0) Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.; TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|66793 : 472.0) no description available & (reliability: 1886.0) & (original description: Putative QUA2, Description = Probable pectin methyltransferase QUA2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05574_204296-212776' '(at2g39750 : 996.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 795.0) no description available & (reliability: 1992.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05955_48296-69092' '(at3g54510 : 740.0) Early-responsive to dehydration stress protein (ERD4); LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36349 : 511.0) no description available & (gnl|cdd|66403 : 292.0) no description available & (reliability: 1480.0) & (original description: Putative At3g54510, Description = CSC1-like protein At3g54510, PFAM = PF13967;PF14703;PF02714)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06200_235603-248066' '(gnl|cdd|69144 : 140.0) no description available & (at3g05700 : 87.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06509_649715-671048' '(at5g19690 : 1158.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37503 : 1054.0) no description available & (gnl|cdd|66228 : 380.0) no description available & (reliability: 2316.0) & (original description: Putative STT3A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, PFAM = PF02516)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06613_61836-64989' '(at3g62730 : 326.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative Sb01g035570, Description = Putative uncharacterized protein Sb01g035570, PFAM = PF13668)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06996_146296-154823' '(gnl|cdd|69144 : 248.0) no description available & (at3g05700 : 208.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF05605;PF14571)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf07034_415680-422370' '(at3g51070 : 894.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 802.0) no description available & (reliability: 1788.0) & (original description: Putative At3g51070, Description = Probable methyltransferase PMT27, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf07223_443793-448565' '(at3g09550 : 752.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 94.8) no description available & (reliability: 1452.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF00023;PF12796;PF12796)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf08724_443753-456238' '(at1g26850 : 987.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 808.0) no description available & (reliability: 1974.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09467_144208-153459' '(at5g64030 : 925.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 774.0) no description available & (reliability: 1850.0) & (original description: Putative At2g40280, Description = Probable methyltransferase PMT23, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09638_89266-94028' '(at4g19120 : 991.0) early-responsive to dehydration 3 (ERD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G31850.2); Has 1146 Blast hits to 1130 proteins in 105 species: Archae - 6; Bacteria - 157; Metazoa - 0; Fungi - 3; Plants - 960; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 722.0) no description available & (reliability: 1982.0) & (original description: Putative ERD3, Description = Probable methyltransferase PMT21, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09648_372418-378033' '(gnl|cdd|69144 : 155.0) no description available & (at3g05700 : 131.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09788_38748-43466' '(gnl|cdd|69144 : 127.0) no description available & (at3g05700 : 85.5) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf10169_503188-509841' '(at2g40280 : 800.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56080.1); Has 1258 Blast hits to 1230 proteins in 178 species: Archae - 2; Bacteria - 211; Metazoa - 31; Fungi - 46; Plants - 944; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|66793 : 724.0) no description available & (reliability: 1600.0) & (original description: Putative At2g40280, Description = Probable methyltransferase PMT23, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf10448_151746-159334' '(at4g18030 : 965.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G26850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 781.0) no description available & (reliability: 1930.0) & (original description: Putative At4g18030, Description = Probable methyltransferase PMT14, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf11205_23503-26266' '(at4g28088 : 88.2) Low temperature and salt responsive protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative At4g30660, Description = UPF0057 membrane protein At4g30660, PFAM = PF01679)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12041_1-7414' '(at2g39750 : 1004.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 2008.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12383_143148-162975' '(at1g60220 : 330.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 158.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 660.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12954_541488-545409' '(at1g47980 : 302.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative Sb09g003940, Description = Putative uncharacterized protein Sb09g003940, PFAM = PF13668)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf13103_4355-9126' '(gnl|cdd|66831 : 227.0) no description available & (at5g25610 : 184.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 103.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 368.0) & (original description: Putative rd22c, Description = BURP domain-containing protein, PFAM = PF03181)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf13816_150134-153064' '(gnl|cdd|87067 : 317.0) no description available & (at3g25780 : 246.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf14755_126395-132413' '(at5g14430 : 906.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 752.0) no description available & (reliability: 1812.0) & (original description: Putative At5g14430, Description = Probable methyltransferase PMT9, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf15067_498458-510815' '(at4g00740 : 966.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66793 : 695.0) no description available & (reliability: 1932.0) & (original description: Putative At4g00740, Description = Probable methyltransferase PMT13, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf16937_83330-89520' '(at2g18250 : 227.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 193.0) no description available & (gnl|cdd|28826 : 187.0) no description available & (reliability: 454.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf19623_48370-58555' '(at1g26850 : 980.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 791.0) no description available & (reliability: 1960.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf20209_17682-29022' '(at1g32090 : 1025.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 733.0) no description available & (gnl|cdd|66403 : 408.0) no description available & (reliability: 2050.0) & (original description: Putative At1g32090, Description = CSC1-like protein At1g32090, PFAM = PF02714;PF13967;PF14703)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf20914_88079-95627' '(at4g02900 : 1029.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 733.0) no description available & (gnl|cdd|66403 : 399.0) no description available & (reliability: 2058.0) & (original description: Putative At4g02900, Description = CSC1-like protein At4g02900, PFAM = PF02714;PF14703;PF13967)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf27001_35060-41444' '(at4g00750 : 895.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 796.0) no description available & (reliability: 1790.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T
'20.2.3' 'stress.abiotic.drought/salt' 'niben101scf38415_2714-10163' '(at4g22120 : 572.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 440.0) no description available & (gnl|cdd|35153 : 143.0) no description available & (reliability: 1144.0) & (original description: Putative BnaC04g19500D, Description = BnaC04g19500D protein, PFAM = PF14703;PF13967)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.3scaffold12068_5174-10397' '(at4g15820 : 105.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = )' T
'20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.3scaffold41110_1634-6427' '(at5g42050 : 308.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p37707|b2_dauca : 295.0) B2 protein - Daucus carota (Carrot) & (reliability: 616.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold1188_187364-209598' '(at1g21610 : 323.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 646.0) & (original description: Putative , Description = , PFAM = PF08729)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold1714_265105-299850' '(at1g21610 : 349.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 698.0) & (original description: Putative , Description = , PFAM = PF08729)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold3606_232747-237970' '(at4g15820 : 106.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = )' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben044scf00006167ctg014_2531-7642' '(at4g02260 : 95.9) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RSH1, Description = AtRSH1, PFAM = )' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00125_193371-213151' '(at4g02260 : 1126.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 406.0) no description available & (gnl|cdd|36372 : 166.0) no description available & (reliability: 2252.0) & (original description: Putative RSH1, Description = Putative GTP diphosphokinase RSH1, chloroplastic, PFAM = PF02824;PF13328;PF04607)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00125_196299-199243' '(at4g02260 : 157.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 101.0) no description available & (reliability: 314.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF02824)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00132_186591-191589' '(p37707|b2_dauca : 306.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 270.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00773_840942-843524' '(p20144|wun1_soltu : 165.0) Wound-induced protein 1 - Solanum tuberosum (Potato) & (gnl|cdd|70566 : 147.0) no description available & (at3g10985 : 115.0) A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.; senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative F9F8.20, Description = Predicted protein, PFAM = PF07107)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 438.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00978_1132174-1135313' '(at5g58750 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative TCM_041627, Description = NAD(P)-binding Rossmann-fold superfamily protein, PFAM = PF01370)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01024_438466-440091' '(at4g10270 : 80.1) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative Sb06g029890, Description = Putative uncharacterized protein Sb06g029890, PFAM = PF12609)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01024_439459-510674' '(at4g10270 : 81.3) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01623_219513-245212' '(at4g02260 : 1207.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 470.0) no description available & (gnl|cdd|36372 : 221.0) no description available & (reliability: 2414.0) & (original description: Putative RSH1, Description = Putative GTP diphosphokinase RSH1, chloroplastic, PFAM = PF04607;PF02824;PF13328)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf02597_538471-570124' '(at1g21610 : 346.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 692.0) & (original description: Putative , Description = , PFAM = PF08729)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf02665_569377-572513' '(at5g58750 : 436.0) NAD(P)-binding Rossmann-fold superfamily protein; BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 872.0) & (original description: Putative TCM_041627, Description = NAD(P)-binding Rossmann-fold superfamily protein, PFAM = PF01370)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03850_294392-299185' '(p37707|b2_dauca : 293.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 264.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03857_219287-221975' '(at4g15820 : 94.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400006281, Description = Putative myb-like protein X-like, PFAM = PF11360)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03926_11813-17362' '(at1g19660 : 396.0) Wound-responsive family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to wounding, nucleotide-excision repair; EXPRESSED IN: ovule; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: bifunctional nuclease in basal defense response 1 (TAIR:AT1G75380.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 792.0) & (original description: Putative BBD2, Description = Bifunctional nuclease 2, PFAM = PF02577)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf04292_756997-759580' '(p20144|wun1_soltu : 166.0) Wound-induced protein 1 - Solanum tuberosum (Potato) & (gnl|cdd|70566 : 152.0) no description available & (at3g10985 : 127.0) A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.; senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative F9F8.20, Description = Predicted protein, PFAM = PF07107)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf04629_230991-236526' '(at1g75380 : 384.0) Encodes a nucleases AtBBD1 involved in ABA-mediated callose deposition.; bifunctional nuclease in basal defense response 1 (BBD1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT1G19660.2); Has 843 Blast hits to 843 proteins in 291 species: Archae - 44; Bacteria - 501; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative BBD, Description = Bifunctional nuclease 1, PFAM = PF02577)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf06654_45302-47550' '(at4g10270 : 80.9) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T
'20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf26911_30375-36869' '(at4g15820 : 87.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = PF11360)' T
'20.2.5' 'stress.abiotic.light' 'nbv0.3scaffold19365_26894-50368' '(at4g05420 : 1987.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1483.0) no description available & (gnl|cdd|66828 : 337.0) no description available & (q7xwp1|cpsf1_orysa : 81.3) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3974.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T
'20.2.5' 'stress.abiotic.light' 'nbv0.5scaffold728_252156-258430' '(at1g75100 : 235.0) Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.; J-domain protein required for chloroplast accumulation response 1 (JAC1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: chloroplast accumulation movement; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 3388 Blast hits to 2243 proteins in 304 species: Archae - 0; Bacteria - 260; Metazoa - 1198; Fungi - 423; Plants - 300; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink). & (gnl|cdd|35652 : 135.0) no description available & (reliability: 470.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.5' 'stress.abiotic.light' 'nbv0.5scaffold802_8622-30888' '(at4g05420 : 1999.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1489.0) no description available & (gnl|cdd|66828 : 345.0) no description available & (q7xwp1|cpsf1_orysa : 88.6) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3998.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf01281_1052864-1076536' '(at4g05420 : 1934.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1441.0) no description available & (gnl|cdd|66828 : 343.0) no description available & (q7xwp1|cpsf1_orysa : 86.7) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3868.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf01822_978902-988108' '(at1g32230 : 372.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative BnaCnng35940D, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf01879_108464-120947' '(at1g32230 : 433.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 866.0) & (original description: Putative RCD1, Description = Inactive poly [ADP-ribose] polymerase RCD1, PFAM = PF00644;PF12174)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf02375_78329-82287' '(at1g32230 : 182.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PGSC0003DMG400004959, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174;PF00644)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf03710_756696-766215' '(at1g21640 : 1230.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 1124.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 390.0) no description available & (gnl|cdd|30410 : 212.0) no description available & (reliability: 2460.0) & (original description: Putative NADK2, Description = NAD kinase 2, chloroplastic, PFAM = PF01513)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf07512_92575-151718' '(at5g63860 : 657.0) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus.; UVB-RESISTANCE 8 (UVR8); FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity; INVOLVED IN: response to UV, response to UV-B; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34783 : 174.0) no description available & (gnl|cdd|36640 : 141.0) no description available & (reliability: 1314.0) & (original description: Putative UVR8, Description = Ultraviolet-B receptor UVR8, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf09628_209011-215788' '(at1g32230 : 372.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative BnaCnng35940D, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf14041_88519-99273' '(at1g21640 : 1220.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 1133.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 390.0) no description available & (gnl|cdd|30410 : 214.0) no description available & (reliability: 2440.0) & (original description: Putative NADK2, Description = NAD kinase 2, chloroplastic, PFAM = PF01513)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf14041_89128-99270' '(at1g21640 : 639.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 570.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 167.0) no description available & (gnl|cdd|30410 : 85.4) no description available & (reliability: 1278.0) & (original description: Putative NADK, Description = NAD kinase, PFAM = PF01513)' T
'20.2.5' 'stress.abiotic.light' 'niben101scf18348_71742-78169' '(at1g75100 : 241.0) Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.; J-domain protein required for chloroplast accumulation response 1 (JAC1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: chloroplast accumulation movement; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 3388 Blast hits to 2243 proteins in 304 species: Archae - 0; Bacteria - 260; Metazoa - 1198; Fungi - 423; Plants - 300; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink). & (gnl|cdd|35652 : 134.0) no description available & (reliability: 482.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T
'20.2.6' 'stress.abiotic.heavy metals' '' ''
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold115_119856-122648' '(gnl|cdd|85297 : 150.0) no description available & (o49813|olee1_betve : 128.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 114.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold539_4821-9801' '(at2g47710 : 181.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 86.3) no description available & (reliability: 362.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold7003_8237-11297' '(gnl|cdd|84754 : 127.0) no description available & (at1g70890 : 85.1) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold22337_26867-31343' '(q9spv5|nec1_nicpl : 316.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 279.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 558.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold23944_1945-5598' '(q9spv5|nec1_nicpl : 297.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 268.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 107.0) no description available & (reliability: 536.0) & (original description: Putative Os05g0277500, Description = Germin-like protein 5-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold51132_8698-11324' '(at2g40330 : 223.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold59779_6242-11798' '(at3g05950 : 248.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 191.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 116.0) no description available & (reliability: 496.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold65328_2200-5448' '(at2g34700 : 112.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03211|pexlp_tobac : 103.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85297 : 102.0) no description available & (reliability: 224.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold14_1769629-1773015' '(at2g47540 : 117.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: root hair specific 13 (TAIR:AT4G02270.1); Has 149 Blast hits to 149 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400031794, Description = Pollen Ole e 1 allergen and extensin family protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold838_266243-269776' '(q9spv5|nec1_nicpl : 225.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 207.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 96.1) no description available & (reliability: 414.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold1304_430347-433595' '(at2g34700 : 111.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85297 : 103.0) no description available & (q03211|pexlp_tobac : 102.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (reliability: 222.0) & (original description: Putative PRP5, Description = 120 kDa pistil extensin-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold1449_426653-435713' '(at5g14680 : 297.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G01520.1); Has 2663 Blast hits to 2654 proteins in 727 species: Archae - 164; Bacteria - 1702; Metazoa - 92; Fungi - 33; Plants - 646; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At3g01520, Description = Universal stress protein A-like protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold2712_279686-297086' '(at1g11360 : 198.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 82.2) no description available & (reliability: 396.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold6542_96318-99553' '(at1g69080 : 161.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold50834_1-697' '(at3g05950 : 176.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 141.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 95.8) no description available & (reliability: 352.0) & (original description: Putative NEC1c, Description = Nectarin 1c, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00003832ctg062_8335-27830' '(at1g11360 : 207.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 82.5) no description available & (reliability: 414.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00004222ctg031_795-5530' '(gnl|cdd|84754 : 129.0) no description available & (at1g70830 : 102.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00004408ctg007_107-15286' '(at3g51780 : 185.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 4 (BAG4); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39562 : 97.8) no description available & (gnl|cdd|29214 : 86.4) no description available & (reliability: 370.0) & (original description: Putative BAG4, Description = BAG family molecular chaperone regulator 4, PFAM = PF02179;PF00240)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00009241ctg001_4316-7035' '(at1g11360 : 267.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 81.8) no description available & (reliability: 534.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00011374ctg017_1-1982' '(q9spv5|nec1_nicpl : 207.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 189.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.0) no description available & (reliability: 378.0) & (original description: Putative Ger, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00013685ctg003_1300-4525' '(at3g09590 : 109.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p09042|pr1c_tobac : 92.0) Pathogenesis-related protein 1C precursor (PR-1C) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47528 : 85.8) no description available & (gnl|cdd|38227 : 85.7) no description available & (reliability: 210.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00016701ctg001_3143-7141' '(at1g44760 : 230.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G69080.1); Has 216 Blast hits to 216 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BnaC06g00720D, Description = BnaC06g00720D protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00020490ctg005_6620-10465' '(at1g69080 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00029699ctg003_13129-15623' '(at3g05950 : 231.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 184.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 112.0) no description available & (reliability: 462.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00047151ctg005_15239-19011' '(at2g47710 : 169.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 89.8) no description available & (reliability: 338.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben044scf00058779ctg004_2155-4793' '(at2g38310 : 228.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101ctg08688_1-882' '(gnl|cdd|84754 : 105.0) no description available & (at1g70840 : 89.7) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101ctg13946_169-2284' '(q9zra4|ab19a_prupe : 253.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 243.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 93.1) no description available & (reliability: 486.0) & (original description: Putative glp, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00024_70251-72929' '(at1g18980 : 240.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: germin-like protein 4 (TAIR:AT1G18970.1); Has 1578 Blast hits to 1564 proteins in 115 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 29; Plants - 1449; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p45851|oxo2_horvu : 216.0) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin) - Hordeum vulgare (Barley) & (gnl|cdd|84597 : 96.9) no description available & (reliability: 480.0) & (original description: Putative At1g18980, Description = Germin-like protein subfamily T member 2, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00088_180112-183904' '(at3g05950 : 213.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 174.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 90.0) no description available & (reliability: 426.0) & (original description: Putative GER2, Description = Germin-like protein 1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00116_522678-530607' '(at1g11360 : 264.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 81.8) no description available & (reliability: 528.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00131_159300-161848' '(q41495|st14_soltu : 192.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 167.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 110.0) no description available & (gnl|cdd|38227 : 81.1) no description available & (reliability: 334.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00133_653097-654846' '(at5g05500 : 197.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00228_1248945-1260437' '(gnl|cdd|84754 : 160.0) no description available & (at1g70840 : 124.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00309_489202-491703' '(at4g14723 : 97.4) BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative EPFL4, Description = EPIDERMAL PATTERNING FACTOR-like protein 4, PFAM = PF17181)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00340_725570-728391' '(at3g05950 : 252.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 195.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 114.0) no description available & (reliability: 504.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00340_758294-761034' '(at3g05950 : 250.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 197.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 113.0) no description available & (reliability: 500.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00394_136527-139414' '(at2g26040 : 263.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative PYL2, Description = Abscisic acid receptor PYL2, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00398_78951-127441' '(gnl|cdd|85297 : 152.0) no description available & (o49813|olee1_betve : 127.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 113.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00493_138923-141546' '(q9zra4|ab19a_prupe : 264.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 246.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 92.3) no description available & (reliability: 492.0) & (original description: Putative ABP19A, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00602_134723-138124' '(at2g47710 : 188.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 83.2) no description available & (reliability: 376.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00682_612052-615598' '(at3g09925 : 196.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G05500.1); Has 222 Blast hits to 222 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At3g09925, Description = Pollen Ole e 1 allergen and extensin family protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_234808-237570' '(at3g05950 : 281.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 228.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 108.0) no description available & (reliability: 562.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_243799-250796' '(at5g39110 : 184.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1516 Blast hits to 1508 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 39; Plants - 1454; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 143.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 84.2) no description available & (reliability: 368.0) & (original description: Putative GER1, Description = Germin-like protein subfamily 1 member 18, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_293263-295763' '(at5g39130 : 216.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1); Has 1495 Blast hits to 1489 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 27; Plants - 1451; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 167.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 99.6) no description available & (reliability: 432.0) & (original description: Putative GER2, Description = Germin-like protein 2a, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00725_779672-785350' '(at1g48960 : 218.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At1g48960, Description = Adenine nucleotide alpha hydrolases-like protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00735_630391-632692' '(gnl|cdd|70078 : 123.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00773_1113124-1115768' '(at2g38310 : 234.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf00985_775860-779155' '(gnl|cdd|70078 : 119.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative AT0ZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01002_1375634-1378637' '(gnl|cdd|85297 : 145.0) no description available & (o49813|olee1_betve : 119.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g08685 : 100.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01143_308904-312311' '(at5g17390 : 168.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01221_580101-582531' '(at4g13450 : 128.0) Adenine nucleotide alpha hydrolases-like superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative PGSC0003DMG400001554, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01237_177104-179628' '(at5g05500 : 199.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01420_85630-90134' '(at1g48960 : 194.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BnaC06g02390D, Description = BnaC06g02390D protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01695_383981-388095' '(at2g47710 : 193.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 92.1) no description available & (reliability: 386.0) & (original description: Putative BnaC03g26110D, Description = BnaC03g26110D protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf01775_130911-135651' '(q9spv5|nec1_nicpl : 276.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 237.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 104.0) no description available & (reliability: 474.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02023_228445-231758' '(at4g08685 : 155.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 120.0) no description available & (p33050|psc13_maize : 115.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 310.0) & (original description: Putative SAH7, Description = Allergen-like protein BRSn20, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02029_126074-127941' '(q41495|st14_soltu : 257.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 191.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 126.0) no description available & (gnl|cdd|38227 : 98.4) no description available & (reliability: 382.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02063_674579-766571' '(at5g39150 : 212.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1509 Blast hits to 1501 proteins in 92 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 39; Plants - 1449; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 166.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 103.0) no description available & (reliability: 424.0) & (original description: Putative NEC1b, Description = Nectarin 1b, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02085_1967295-1986652' '(at3g51780 : 193.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 4 (BAG4); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39562 : 102.0) no description available & (gnl|cdd|29214 : 83.0) no description available & (reliability: 386.0) & (original description: Putative BAG4, Description = BAG family molecular chaperone regulator 4, PFAM = PF00240;PF02179)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02085_2133110-2135748' '(at2g38310 : 228.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative PYL8, Description = Abscisic acid receptor PYL8, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02151_54792-58371' '(at1g69080 : 123.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative MRH6, Description = Adenine nucleotide alpha hydrolases-like protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_300337-303358' '(q9spv5|nec1_nicpl : 218.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 201.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 89.2) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_300376-350936' '(q9spv5|nec1_nicpl : 213.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 199.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 90.0) no description available & (reliability: 398.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_345604-348861' '(q9spv5|nec1_nicpl : 231.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 217.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 98.8) no description available & (reliability: 434.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_345640-348927' '(q9spv5|nec1_nicpl : 228.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 216.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 97.7) no description available & (reliability: 432.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02610_186011-190384' '(at1g70830 : 249.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84754 : 159.0) no description available & (reliability: 498.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407;PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02618_422300-425424' '(gnl|cdd|84754 : 121.0) no description available & (at1g70880 : 97.4) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02618_510410-513464' '(gnl|cdd|84754 : 120.0) no description available & (at1g70830 : 100.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02714_566608-569954' '(q9spv5|nec1_nicpl : 404.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 259.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 518.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02749_419924-422547' '(q9zra4|ab19a_prupe : 272.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 255.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 93.1) no description available & (reliability: 510.0) & (original description: Putative ABP19A, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02778_449667-453013' '(at1g11360 : 231.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|30165 : 81.3) no description available & (reliability: 462.0) & (original description: Putative PHOS34, Description = Universal stress protein PHOS34, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf02917_20317-22967' '(at3g10080 : 268.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1595 Blast hits to 1591 proteins in 125 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 57; Plants - 1448; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 150.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 104.0) no description available & (reliability: 536.0) & (original description: Putative At3g10080, Description = Germin-like protein subfamily 3 member 2, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03076_98910-102181' '(at2g44380 : 100.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400010439, Description = , PFAM = PF03107;PF03107;PF03107)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03099_489470-492436' '(at1g24020 : 180.0) MLP-like protein 423 (MLP423); INVOLVED IN: response to biotic stimulus, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3). & (gnl|cdd|84754 : 142.0) no description available & (reliability: 360.0) & (original description: Putative MLP423, Description = MLP-like protein 423, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03106_130446-133105' '(at1g10460 : 214.0) germin-like protein (GLP7); germin-like protein 7 (GLP7); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G05950.1); Has 1505 Blast hits to 1501 proteins in 101 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 42; Plants - 1425; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 155.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 93.1) no description available & (reliability: 428.0) & (original description: Putative GLP7, Description = Germin-like protein subfamily 1 member 1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03145_239495-243600' '(at1g68300 : 159.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|30165 : 101.0) no description available & (reliability: 318.0) & (original description: Putative At1g68300, Description = Predicted protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03160_284367-286264' '(at3g62020 : 127.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9s8p4|rhre_pea : 127.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (gnl|cdd|84597 : 86.5) no description available & (reliability: 254.0) & (original description: Putative Os09g0568600, Description = Putative germin-like protein 9-2, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03160_286265-288171' '(at1g02335 : 119.0) germin-like protein subfamily 2 member 2 precursor (GL22); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 2264 Blast hits to 2183 proteins in 312 species: Archae - 0; Bacteria - 520; Metazoa - 1; Fungi - 98; Plants - 1608; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 116.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 80.3) no description available & (reliability: 226.0) & (original description: Putative Os09g0568700, Description = Germin-like protein 9-3, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03309_861205-864361' '(o49813|olee1_betve : 134.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g18596 : 130.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular space, endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), Allergen Ole e 1, conserved site (InterPro:IPR006040); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G45880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 130.0) no description available & (reliability: 260.0) & (original description: Putative PGSC0003DMG400010242, Description = Olee1-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03510_55702-58785' '(at4g08685 : 131.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 115.0) no description available & (p33050|psc13_maize : 103.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 262.0) & (original description: Putative DFC, Description = Protein DOWNSTREAM OF FLC, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03756_229549-232955' '(at3g03290 : 154.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: embryo, leaf whorl; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT5G17390.1); Has 251 Blast hits to 245 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 1; Plants - 149; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03842_163955-169539' '(at2g30370 : 115.0) Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2.; CHALLAH (CHAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of stomatal complex development; EXPRESSED IN: midvein, hypocotyl, fruit proximal end, endosperm; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14723.1). & (reliability: 230.0) & (original description: Putative CHAL, Description = Allergen-related family protein, PFAM = PF17181)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf03893_370308-373249' '(gnl|cdd|84754 : 139.0) no description available & (at1g70890 : 90.5) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf04526_62728-72906' '(at3g05950 : 224.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 178.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 109.0) no description available & (reliability: 448.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf04526_72907-75118' '(at3g05950 : 201.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 172.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 106.0) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf04633_220271-236811' '(at5g14680 : 289.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G01520.1); Has 2663 Blast hits to 2654 proteins in 727 species: Archae - 164; Bacteria - 1702; Metazoa - 92; Fungi - 33; Plants - 646; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative At3g01520, Description = Universal stress protein A-like protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf04660_106727-108710' '(q41495|st14_soltu : 258.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 189.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 124.0) no description available & (gnl|cdd|38227 : 98.0) no description available & (reliability: 378.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05231_234857-245515' '(at2g47710 : 178.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 84.8) no description available & (reliability: 356.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05279_580878-589575' '(at2g21620 : 246.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative Rd2, Description = Response to dessication 2, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05304_520401-524205' '(at1g44760 : 224.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G69080.1); Has 216 Blast hits to 216 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaC06g00720D, Description = BnaC06g00720D protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05306_263311-266536' '(at3g09590 : 111.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p07053|pr1b_tobac : 93.6) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38227 : 91.9) no description available & (gnl|cdd|47528 : 88.9) no description available & (reliability: 214.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05469_217479-220081' '(at2g40330 : 161.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PYL11, Description = Abscisic acid receptor PYL11, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05469_217491-220027' '(at2g40330 : 157.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PYL4, Description = Abscisic acid receptor, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05860_201644-207179' '(at5g61750 : 196.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p45852|glp1_mescr : 132.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 81.5) no description available & (reliability: 392.0) & (original description: Putative Os11g0537350, Description = Germin-like protein 11-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_378488-381730' '(q9spv5|nec1_nicpl : 305.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 260.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 106.0) no description available & (reliability: 520.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_489418-494972' '(q9spv5|nec1_nicpl : 233.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 215.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (reliability: 430.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_489562-522189' '(q9spv5|nec1_nicpl : 229.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 211.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.6) no description available & (reliability: 422.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06378_189199-250118' '(at2g40330 : 243.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06493_34085-37544' '(at5g15780 : 139.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 85252 Blast hits to 38354 proteins in 1825 species: Archae - 258; Bacteria - 17925; Metazoa - 33727; Fungi - 8101; Plants - 11894; Viruses - 2873; Other Eukaryotes - 10474 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA02g02790D, Description = BnaA02g02790D protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06552_229578-232836' '(at4g08685 : 120.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 110.0) no description available & (p33050|psc13_maize : 99.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative DFC, Description = Pollen-specific protein C13, putative, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06570_590230-593756' '(gnl|cdd|85297 : 117.0) no description available & (q03211|pexlp_tobac : 114.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (at2g34700 : 108.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06674_487379-490622' '(at5g15780 : 139.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 85252 Blast hits to 38354 proteins in 1825 species: Archae - 258; Bacteria - 17925; Metazoa - 33727; Fungi - 8101; Plants - 11894; Viruses - 2873; Other Eukaryotes - 10474 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At5g15780, Description = Putative ovule protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06775_119301-121609' '(gnl|cdd|70078 : 114.0) no description available & (at1g01170 : 108.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06779_411711-414964' '(at3g05950 : 192.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p15290|ger2_wheat : 148.0) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4) (Germin GF-2.8) - Triticum aestivum (Wheat) & (gnl|cdd|84597 : 89.6) no description available & (reliability: 384.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf06779_420744-423980' '(at3g05950 : 221.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 178.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 99.2) no description available & (reliability: 442.0) & (original description: Putative NEC1c, Description = Nectarin 1c, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf07096_128938-132296' '(gnl|cdd|84754 : 148.0) no description available & (at1g70850 : 122.0) MLP-like protein 34 (MLP34); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf07303_101146-109519' '(at1g11360 : 229.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (reliability: 458.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf07314_407471-410478' '(o49813|olee1_betve : 154.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (gnl|cdd|85297 : 140.0) no description available & (at4g18596 : 136.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular space, endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), Allergen Ole e 1, conserved site (InterPro:IPR006040); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G45880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative LAT52, Description = Olee1-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf07321_34160-36932' '(at5g39130 : 279.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1); Has 1495 Blast hits to 1489 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 27; Plants - 1451; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 228.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 110.0) no description available & (reliability: 558.0) & (original description: Putative GLP5A, Description = Germin-like protein subfamily 1 member 20, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf07321_50608-53378' '(at5g39190 : 285.0) germin-like protein (GLP2a); germin-like protein 2 (GER2); CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p45852|glp1_mescr : 221.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 110.0) no description available & (reliability: 570.0) & (original description: Putative GLP5A, Description = Germin-like protein subfamily 1 member 20, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08157_246443-249801' '(at1g11360 : 262.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|30165 : 81.3) no description available & (reliability: 524.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08191_235900-239077' '(gnl|cdd|85297 : 145.0) no description available & (o49813|olee1_betve : 127.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 117.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08447_261110-263721' '(gnl|cdd|84754 : 162.0) no description available & (at1g70840 : 144.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative MLP31, Description = MLP-like protein 31, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08470_626504-628899' '(at4g14723 : 93.6) BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative CHAL, Description = Epidermal patterning factor-like protein, PFAM = PF17181)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08592_180366-191043' '(at1g11360 : 206.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 84.1) no description available & (reliability: 412.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf08843_7719-10474' '(at2g34700 : 111.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03211|pexlp_tobac : 98.6) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85297 : 98.1) no description available & (reliability: 222.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf09455_133796-136473' '(at3g09590 : 132.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (q00008|prms_maize : 127.0) Pathogenesis-related protein PRMS precursor - Zea mays (Maize) & (gnl|cdd|29108 : 121.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 258.0) & (original description: Putative PGSC0003DMG400023936, Description = BnaC03g35900D protein, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf09698_11536-13991' '(gnl|cdd|70078 : 113.0) no description available & (at1g01170 : 105.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf09910_92306-102793' '(at5g39120 : 92.4) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1513 Blast hits to 1505 proteins in 94 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 39; Plants - 1449; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative NEC1b, Description = Nectarin 1b, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf10169_511488-514009' '(at5g05500 : 199.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf11037_11015-15283' '(at2g47710 : 205.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative USP, Description = Universal stress protein A-like protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf11182_18090-23457' '(at1g68300 : 158.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|30165 : 99.0) no description available & (reliability: 316.0) & (original description: Putative Sb0139s002020, Description = Putative uncharacterized protein Sb0139s002020, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf11283_70239-73353' '(gnl|cdd|84754 : 119.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MLP, Description = Putative major latex-like protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf11546_54365-57524' '(gnl|cdd|84754 : 122.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf11884_43888-46565' '(at1g18980 : 233.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: germin-like protein 4 (TAIR:AT1G18970.1); Has 1578 Blast hits to 1564 proteins in 115 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 29; Plants - 1449; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p45851|oxo2_horvu : 209.0) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin) - Hordeum vulgare (Barley) & (gnl|cdd|84597 : 93.8) no description available & (reliability: 466.0) & (original description: Putative At1g18980, Description = Germin-like protein subfamily T member 2, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf12540_1-4216' '(at5g54855 : 214.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative At5g54855, Description = AT1g27100/T7N9_16, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf13118_1871-5453' '(at2g47710 : 222.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf13518_53297-59268' '(at5g54855 : 211.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative Sb07g009530, Description = Putative uncharacterized protein Sb07g009530, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf16189_81188-83946' '(at5g61750 : 202.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p45852|glp1_mescr : 134.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 84.6) no description available & (reliability: 404.0) & (original description: Putative Os11g0537350, Description = Germin-like protein 11-1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf16733_231143-234640' '(at5g17390 : 171.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf17640_7844-10476' '(at2g38310 : 230.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative PYL13, Description = Abscisic acid receptor PYL13, PFAM = PF10604)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf20364_9942-12701' '(at3g05950 : 201.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 167.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 94.2) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Germin-like protein 1, PFAM = PF00190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf23606_44482-47003' '(q40374|pr1_medtr : 202.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (at4g25790 : 200.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3181 Blast hits to 3018 proteins in 396 species: Archae - 2; Bacteria - 78; Metazoa - 1651; Fungi - 340; Plants - 995; Viruses - 8; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|29108 : 133.0) no description available & (gnl|cdd|38227 : 115.0) no description available & (reliability: 400.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf23892_134860-174315' '(at4g08685 : 147.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 121.0) no description available & (p33050|psc13_maize : 120.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 294.0) & (original description: Putative DFC, Description = Protein DOWNSTREAM OF FLC, PFAM = PF01190)' T
'20.2.99' 'stress.abiotic.unspecified' 'niben101scf34542_78773-82174' '(at2g26040 : 240.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative PYL2, Description = Abscisic acid receptor PYL2, PFAM = PF10604)' T
'20.2.1001' 'stress.abiotic' 'betaine' '' M
'20.1001' 'stress' 'ascorbate' 'hormone metabolism.ethylene; stress; redox' M
'20.1002' 'stress' 'dehydroascorbate' 'stress; redox regulation' M
'20.1003' 'stress' 'proline' 'amino acid synthesis.proline; amino acid degradation.proline; stress' M
'21' 'redox' '' ''
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold2684_41262-50705' '(at2g18990 : 231.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 228.0) no description available & (gnl|cdd|48538 : 164.0) no description available & (reliability: 456.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold3009_23110-33729' '(at3g20560 : 692.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 190.0) no description available & (gnl|cdd|37878 : 173.0) no description available & (reliability: 1290.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF07970;PF00085;PF13850)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold14090_8677-11816' '(at5g61440 : 205.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 91.9) no description available & (reliability: 410.0) & (original description: Putative trx2, Description = Thioredoxin-like 1-2, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold14948_1-2790' '(at5g61440 : 241.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 108.0) no description available & (reliability: 482.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold25347_7323-11809' '(at1g76080 : 390.0) Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD).; chloroplastic drought-induced stress protein of 32 kD (CDSP32); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 3263 Blast hits to 3026 proteins in 903 species: Archae - 63; Bacteria - 1344; Metazoa - 643; Fungi - 77; Plants - 661; Viruses - 3; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|48534 : 161.0) no description available & (reliability: 780.0) & (original description: Putative CDSP32, Description = Thioredoxin-like protein CDSP32, chloroplastic, PFAM = PF00085;PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold35574_12493-20029' '(gnl|cdd|36522 : 290.0) no description available & (at4g22670 : 238.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29151 : 80.1) no description available & (reliability: 440.0) & (original description: Putative st13, Description = Hsc70-interacting protein, PFAM = PF13181)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold40369_13009-18924' '(at1g53300 : 651.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 128.0) no description available & (gnl|cdd|48496 : 89.9) no description available & (reliability: 1302.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00085;PF00515;PF14559)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold54052_3154-11079' '(gnl|cdd|36522 : 300.0) no description available & (at4g22670 : 226.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative ST13P4, Description = Putative protein FAM10A4, PFAM = PF13181)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold55420_2420-6050' '(at3g08710 : 130.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 121.0) no description available & (p29449|trxh1_tobac : 97.4) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 96.4) no description available & (reliability: 260.0) & (original description: Putative Os05g0480200, Description = Thioredoxin H5, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold66837_1472-7629' '(at4g29670 : 252.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 109.0) no description available & (reliability: 504.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold69163_557-9209' '(q9xgs0|trxm_brana : 155.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at4g03520 : 145.0) chloroplast localized thioredoxin, similar to prokaryotic types.; ATHM2; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146; Bacteria - 6732; Metazoa - 24; Fungi - 110; Plants - 264; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|36128 : 130.0) no description available & (gnl|cdd|84504 : 122.0) no description available & (reliability: 290.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.3scaffold72231_4222-8661' '(at5g06430 : 191.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BnaC09g49120D, Description = BnaC09g49120D protein, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.5scaffold1666_364578-382456' '(at3g17880 : 382.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 225.0) no description available & (q42443|trxh_orysa : 117.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 108.0) no description available & (reliability: 764.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.5scaffold1794_190090-197583' '(at2g41680 : 547.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 459.0) no description available & (gnl|cdd|30838 : 317.0) no description available & (reliability: 1094.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992)' T
'21.1' 'redox.thioredoxin' 'nbv0.5scaffold3621_130018-134351' '(at1g76760 : 167.0) Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.; thioredoxin Y1 (TY1); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: glycerol ether metabolic process, cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 23491 Blast hits to 21806 proteins in 3039 species: Archae - 310; Bacteria - 12245; Metazoa - 3466; Fungi - 1226; Plants - 1976; Viruses - 18; Other Eukaryotes - 4250 (source: NCBI BLink). & (gnl|cdd|36128 : 130.0) no description available & (gnl|cdd|84504 : 114.0) no description available & (p23400|trxm_chlre : 87.8) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 334.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.5scaffold3668_8169-19115' '(at3g15360 : 180.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (p48384|trxm_pea : 169.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|36128 : 143.0) no description available & (gnl|cdd|84504 : 128.0) no description available & (reliability: 360.0) & (original description: Putative TRM1, Description = Thioredoxin M-type, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'nbv0.5scaffold5435_9015-12852' '(at5g51010 : 136.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T
'21.1' 'redox.thioredoxin' 'niben044scf00002284ctg025_19832-25894' '(at4g29670 : 249.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 111.0) no description available & (reliability: 498.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00003287ctg005_501-8674' '(at3g03860 : 265.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 171.0) no description available & (gnl|cdd|48548 : 119.0) no description available & (reliability: 530.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00005042ctg007_297-3514' '(at5g61440 : 246.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 492.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00010832ctg003_1515-12927' '(at3g08710 : 203.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 98.8) no description available & (reliability: 406.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00013184ctg010_9088-13764' '(q9xgs0|trxm_brana : 181.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at3g15360 : 180.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (gnl|cdd|36128 : 143.0) no description available & (gnl|cdd|84504 : 129.0) no description available & (reliability: 360.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00013336ctg014_3450-9966' '(at4g29670 : 250.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 500.0) & (original description: Putative trx2, Description = Thioredoxin-like 2, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00014416ctg005_3794-8848' '(at3g53220 : 171.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 2 (TAIR:AT5G39950.1); Has 8343 Blast hits to 8341 proteins in 2235 species: Archae - 86; Bacteria - 4305; Metazoa - 749; Fungi - 428; Plants - 986; Viruses - 2; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36125 : 86.9) no description available & (gnl|cdd|48496 : 84.1) no description available & (reliability: 342.0) & (original description: Putative Os04g0560200, Description = Thioredoxin-like 3-3, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00018030ctg001_371-5897' '(at2g04700 : 215.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (o49856|ftrc_soybn : 204.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) - Glycine max (Soybean) & (gnl|cdd|66604 : 180.0) no description available & (reliability: 430.0) & (original description: Putative FTRC, Description = Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, PFAM = PF02943)' T
'21.1' 'redox.thioredoxin' 'niben044scf00018815ctg000_3148-11716' '(gnl|cdd|36125 : 125.0) no description available & (at5g39950 : 119.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|48496 : 116.0) no description available & (q39362|trxh2_brana : 99.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 238.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00018915ctg010_1228-5436' '(at1g50320 : 184.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|84504 : 115.0) no description available & (gnl|cdd|36128 : 101.0) no description available & (p23400|trxm_chlre : 87.0) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 368.0) & (original description: Putative ATHX, Description = Thioredoxin X, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00020851ctg012_6356-13730' '(at2g18990 : 239.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 224.0) no description available & (gnl|cdd|48538 : 162.0) no description available & (reliability: 474.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00021750ctg003_5-10331' '(gnl|cdd|36522 : 288.0) no description available & (at4g22670 : 231.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative STI1, Description = Putative Stress-induced-phosphoprotein 1, PFAM = PF13181)' T
'21.1' 'redox.thioredoxin' 'niben044scf00029294ctg000_1-2073' '(at5g08410 : 105.0) ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 (FTRA2); FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, catalytic activity, ferredoxin reductase activity; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, alpha chain (InterPro:IPR004207), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 (TAIR:AT5G23440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80680|ftrv_maize : 90.9) Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin-thioredoxin reductase subunit A) (FTR-A) - Zea mays (Maize) & (gnl|cdd|86196 : 87.0) no description available & (reliability: 210.0) & (original description: Putative FTRV, Description = Ferredoxin-thioredoxin reductase, variable chain, PFAM = PF02941)' T
'21.1' 'redox.thioredoxin' 'niben044scf00031786ctg003_8198-12419' '(at1g08570 : 259.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 518.0) & (original description: Putative ACHT4, Description = Atypical CYS HIS rich thioredoxin 4, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00034204ctg000_1-1154' '(at2g15570 : 157.0) chloroplast protein similar to prokaryotic thioredoxin.; ATHM3; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 4 (TAIR:AT3G15360.1); Has 16998 Blast hits to 16795 proteins in 2911 species: Archae - 264; Bacteria - 9868; Metazoa - 1437; Fungi - 798; Plants - 1429; Viruses - 4; Other Eukaryotes - 3198 (source: NCBI BLink). & (gnl|cdd|36128 : 135.0) no description available & (p48384|trxm_pea : 114.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|84504 : 101.0) no description available & (reliability: 314.0) & (original description: Putative GAT1, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00041079ctg002_10385-16377' '(gnl|cdd|35625 : 519.0) no description available & (at2g17420 : 499.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 323.0) no description available & (reliability: 998.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T
'21.1' 'redox.thioredoxin' 'niben044scf00041473ctg004_19-9008' '(at5g66410 : 243.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 224.0) no description available & (gnl|cdd|48538 : 159.0) no description available & (reliability: 486.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = )' T
'21.1' 'redox.thioredoxin' 'niben044scf00042864ctg001_4152-12679' '(at3g03860 : 225.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 164.0) no description available & (gnl|cdd|48548 : 120.0) no description available & (reliability: 450.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben044scf00055224ctg001_1-4936' '(at1g53300 : 678.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 135.0) no description available & (gnl|cdd|29151 : 85.9) no description available & (reliability: 1356.0) & (original description: Putative TTL3, Description = Inactive TPR repeat-containing thioredoxin TTL3, PFAM = PF00515;PF00085;PF13414)' T
'21.1' 'redox.thioredoxin' 'niben101scf00090_711094-727369' '(at1g07700 : 211.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At1g07700, Description = Thioredoxin-like 4, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf00176_617703-629598' '(at1g11530 : 144.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (gnl|cdd|36125 : 104.0) no description available & (gnl|cdd|48496 : 87.2) no description available & (q07090|trxh2_tobac : 83.2) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (reliability: 288.0) & (original description: Putative CXXS1, Description = Thioredoxin-like protein CXXS1, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf00481_98408-104660' '(at1g08570 : 258.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 516.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf00539_764277-768892' '(at1g76080 : 389.0) Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD).; chloroplastic drought-induced stress protein of 32 kD (CDSP32); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 3263 Blast hits to 3026 proteins in 903 species: Archae - 63; Bacteria - 1344; Metazoa - 643; Fungi - 77; Plants - 661; Viruses - 3; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|48534 : 162.0) no description available & (reliability: 778.0) & (original description: Putative CDSP32, Description = Thioredoxin-like protein CDSP32, chloroplastic, PFAM = PF00085;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf00653_140345-146823' '(at5g16400 : 177.0) Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.; thioredoxin F2 (TRXF2); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin F-type 1 (TAIR:AT3G02730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29450|trxf_pea : 173.0) Thioredoxin F-type, chloroplast precursor (TRX-F) - Pisum sativum (Garden pea) & (gnl|cdd|36125 : 111.0) no description available & (gnl|cdd|84504 : 104.0) no description available & (reliability: 354.0) & (original description: Putative trx11, Description = Thioredoxin F-type, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf00869_715503-717994' '(at5g08410 : 111.0) ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 (FTRA2); FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, catalytic activity, ferredoxin reductase activity; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, alpha chain (InterPro:IPR004207), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 (TAIR:AT5G23440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80680|ftrv_maize : 95.1) Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin-thioredoxin reductase subunit A) (FTR-A) - Zea mays (Maize) & (gnl|cdd|86196 : 89.7) no description available & (reliability: 222.0) & (original description: Putative FTRV, Description = Ferredoxin-thioredoxin reductase, variable chain, PFAM = PF02941)' T
'21.1' 'redox.thioredoxin' 'niben101scf01012_486087-489481' '(at5g06430 : 213.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At5g06430, Description = At5g06430, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf01036_372649-379381' '(q9xgs0|trxm_brana : 185.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at3g15360 : 183.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (gnl|cdd|36128 : 150.0) no description available & (gnl|cdd|84504 : 131.0) no description available & (reliability: 366.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf01294_624643-636236' '(q9xgs0|trxm_brana : 155.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at4g03520 : 144.0) chloroplast localized thioredoxin, similar to prokaryotic types.; ATHM2; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146; Bacteria - 6732; Metazoa - 24; Fungi - 110; Plants - 264; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|36128 : 136.0) no description available & (gnl|cdd|84504 : 123.0) no description available & (reliability: 288.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf01677_446126-452636' '(gnl|cdd|35625 : 518.0) no description available & (at2g17420 : 504.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 313.0) no description available & (reliability: 1008.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T
'21.1' 'redox.thioredoxin' 'niben101scf01701_773455-777136' '(p29449|trxh1_tobac : 213.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 167.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (gnl|cdd|48496 : 111.0) no description available & (reliability: 334.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf01739_558549-573278' '(at2g35010 : 160.0) thioredoxin O1 (TO1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O2 (TAIR:AT1G31020.1); Has 13800 Blast hits to 13766 proteins in 2821 species: Archae - 178; Bacteria - 7899; Metazoa - 1073; Fungi - 652; Plants - 1267; Viruses - 5; Other Eukaryotes - 2726 (source: NCBI BLink). & (gnl|cdd|36125 : 102.0) no description available & (gnl|cdd|48496 : 96.8) no description available & (reliability: 320.0) & (original description: Putative trx, Description = Thioredoxin O1, mitochondrial, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02027_34136-38163' '(at5g51010 : 131.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T
'21.1' 'redox.thioredoxin' 'niben101scf02043_340016-342808' '(at5g39950 : 140.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|36125 : 122.0) no description available & (q39362|trxh2_brana : 117.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (gnl|cdd|48496 : 114.0) no description available & (reliability: 280.0) & (original description: Putative TRX2, Description = Thioredoxin H2, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02043_395947-409262' '(gnl|cdd|36125 : 123.0) no description available & (gnl|cdd|48496 : 116.0) no description available & (at5g39950 : 113.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (q39362|trxh2_brana : 98.6) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 226.0) & (original description: Putative trx3, Description = Thioredoxin 3, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02235_176734-192852' '(at3g03860 : 198.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 138.0) no description available & (gnl|cdd|48548 : 111.0) no description available & (reliability: 396.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02275_375852-380048' '(at1g08570 : 260.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 520.0) & (original description: Putative ACHT4, Description = Atypical CYS HIS rich thioredoxin 4, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02442_71807-79405' '(gnl|cdd|36522 : 293.0) no description available & (at4g22670 : 238.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative ST13, Description = Hsc70-interacting protein, PFAM = PF13181)' T
'21.1' 'redox.thioredoxin' 'niben101scf02507_295123-300457' '(at3g15360 : 185.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (q9xgs0|trxm_brana : 175.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (gnl|cdd|36128 : 145.0) no description available & (gnl|cdd|84504 : 131.0) no description available & (reliability: 370.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02537_1377278-1382677' '(at1g34780 : 304.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 4 (APRL4); LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37851 : 196.0) no description available & (gnl|cdd|48548 : 146.0) no description available & (reliability: 608.0) & (original description: Putative APRL4, Description = 5'-adenylylsulfate reductase-like 4, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02569_232385-240205' '(at2g18990 : 164.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 163.0) no description available & (gnl|cdd|48538 : 112.0) no description available & (reliability: 324.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = )' T
'21.1' 'redox.thioredoxin' 'niben101scf02581_44824-49141' '(at5g51010 : 157.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T
'21.1' 'redox.thioredoxin' 'niben101scf02602_2955-7401' '(at3g15360 : 185.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (q9xgs0|trxm_brana : 183.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (gnl|cdd|36128 : 148.0) no description available & (gnl|cdd|84504 : 133.0) no description available & (reliability: 370.0) & (original description: Putative trxA, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02631_165393-177464' '(at2g15570 : 157.0) chloroplast protein similar to prokaryotic thioredoxin.; ATHM3; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 4 (TAIR:AT3G15360.1); Has 16998 Blast hits to 16795 proteins in 2911 species: Archae - 264; Bacteria - 9868; Metazoa - 1437; Fungi - 798; Plants - 1429; Viruses - 4; Other Eukaryotes - 3198 (source: NCBI BLink). & (gnl|cdd|36128 : 138.0) no description available & (p48384|trxm_pea : 115.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|84504 : 106.0) no description available & (reliability: 314.0) & (original description: Putative Trx10, Description = Mitochondrial thioredoxin M-type 10, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02806_2749-5327' '(gnl|cdd|36125 : 104.0) no description available & (gnl|cdd|48496 : 97.6) no description available & (at5g39950 : 92.8) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative trx3, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf02927_440753-444497' '(at5g06690 : 214.0) Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 1 (WCRKC1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 2 (TAIR:AT5G04260.1); Has 1600 Blast hits to 1600 proteins in 488 species: Archae - 10; Bacteria - 949; Metazoa - 23; Fungi - 13; Plants - 132; Viruses - 4; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36125 : 91.5) no description available & (reliability: 428.0) & (original description: Putative WCRKC1, Description = Thioredoxin-like 3-1, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03044_9196-22791' '(at3g20560 : 694.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 191.0) no description available & (gnl|cdd|37878 : 176.0) no description available & (reliability: 1288.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF00085;PF13850;PF07970)' T
'21.1' 'redox.thioredoxin' 'niben101scf03345_61897-84316' '(at3g17880 : 373.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 210.0) no description available & (q42443|trxh_orysa : 118.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 107.0) no description available & (reliability: 746.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03439_24341-30089' '(at1g53300 : 678.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 136.0) no description available & (gnl|cdd|29151 : 85.5) no description available & (reliability: 1356.0) & (original description: Putative TTL3, Description = Inactive TPR repeat-containing thioredoxin TTL3, PFAM = PF00515;PF13414;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03535_99874-105531' '(at3g53220 : 155.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 2 (TAIR:AT5G39950.1); Has 8343 Blast hits to 8341 proteins in 2235 species: Archae - 86; Bacteria - 4305; Metazoa - 749; Fungi - 428; Plants - 986; Viruses - 2; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36125 : 85.3) no description available & (gnl|cdd|48496 : 80.3) no description available & (reliability: 310.0) & (original description: Putative Os04g0560200, Description = Thioredoxin-like 3-3, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03705_454852-468266' '(at1g31020 : 152.0) thioredoxin O2 (TO2); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O1 (TAIR:AT2G35010.2); Has 12673 Blast hits to 12649 proteins in 2832 species: Archae - 166; Bacteria - 7079; Metazoa - 1001; Fungi - 576; Plants - 1203; Viruses - 3; Other Eukaryotes - 2645 (source: NCBI BLink). & (gnl|cdd|36125 : 100.0) no description available & (gnl|cdd|48496 : 94.9) no description available & (reliability: 304.0) & (original description: Putative trx, Description = Thioredoxin O1, mitochondrial, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03778_198475-202619' '(at4g29670 : 214.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 113.0) no description available & (reliability: 428.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf03954_134672-138946' '(at1g76760 : 161.0) Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.; thioredoxin Y1 (TY1); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: glycerol ether metabolic process, cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 23491 Blast hits to 21806 proteins in 3039 species: Archae - 310; Bacteria - 12245; Metazoa - 3466; Fungi - 1226; Plants - 1976; Viruses - 18; Other Eukaryotes - 4250 (source: NCBI BLink). & (gnl|cdd|36128 : 128.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (p23400|trxm_chlre : 83.6) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 322.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04036_83722-89710' '(at1g53300 : 653.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 127.0) no description available & (gnl|cdd|48496 : 89.5) no description available & (reliability: 1306.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00515;PF14559;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04123_218761-226858' '(at3g08710 : 204.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 99.1) no description available & (reliability: 408.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04375_804486-809925' '(at5g16400 : 180.0) Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.; thioredoxin F2 (TRXF2); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin F-type 1 (TAIR:AT3G02730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29450|trxf_pea : 176.0) Thioredoxin F-type, chloroplast precursor (TRX-F) - Pisum sativum (Garden pea) & (gnl|cdd|36125 : 110.0) no description available & (gnl|cdd|84504 : 104.0) no description available & (reliability: 360.0) & (original description: Putative trx11, Description = Thioredoxin F-type, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04551_496468-504879' '(q43636|trxh_ricco : 199.0) Thioredoxin H-type (TRX-H) - Ricinus communis (Castor bean) & (at3g51030 : 182.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (reliability: 364.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04765_3314-9337' '(at4g04950 : 662.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (gnl|cdd|36129 : 248.0) no description available & (gnl|cdd|48577 : 162.0) no description available & (reliability: 1324.0) & (original description: Putative GRXS17, Description = Monothiol glutaredoxin-S17, PFAM = PF00085;PF00462;PF00462;PF00462)' T
'21.1' 'redox.thioredoxin' 'niben101scf04793_149415-153635' '(at5g06690 : 213.0) Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 1 (WCRKC1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 2 (TAIR:AT5G04260.1); Has 1600 Blast hits to 1600 proteins in 488 species: Archae - 10; Bacteria - 949; Metazoa - 23; Fungi - 13; Plants - 132; Viruses - 4; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36125 : 93.8) no description available & (reliability: 426.0) & (original description: Putative WCRKC1, Description = Thioredoxin-like 3-1, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04899_28388-34445' '(at4g04950 : 676.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (gnl|cdd|36129 : 252.0) no description available & (gnl|cdd|48577 : 161.0) no description available & (reliability: 1352.0) & (original description: Putative GRS11, Description = Monothiol glutaredoxin-S11, PFAM = PF00462;PF00462;PF00462;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf04903_197887-205474' '(at3g08710 : 127.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 114.0) no description available & (q07090|trxh2_tobac : 93.6) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 90.7) no description available & (reliability: 254.0) & (original description: Putative ATH9, Description = Thioredoxin H-type, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf05174_262876-265870' '(at1g07700 : 213.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaA03g46730D, Description = BnaA03g46730D protein, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf05764_534313-537878' '(q07090|trxh2_tobac : 214.0) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 179.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 125.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (reliability: 358.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf06113_68611-73934' '(at1g11530 : 146.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (gnl|cdd|36125 : 106.0) no description available & (gnl|cdd|48496 : 90.3) no description available & (q07090|trxh2_tobac : 82.8) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (reliability: 292.0) & (original description: Putative CXXS1, Description = Thioredoxin-like protein CXXS1, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf06280_567894-574001' '(at2g04700 : 216.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (o49856|ftrc_soybn : 206.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) - Glycine max (Soybean) & (gnl|cdd|66604 : 183.0) no description available & (reliability: 432.0) & (original description: Putative FTRC, Description = Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, PFAM = PF02943)' T
'21.1' 'redox.thioredoxin' 'niben101scf06565_330097-335364' '(at3g08710 : 126.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (q07090|trxh2_tobac : 97.8) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 95.7) no description available & (reliability: 252.0) & (original description: Putative ATH9, Description = Thioredoxin H-type, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf06727_75161-87653' '(at2g41680 : 777.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 471.0) no description available & (gnl|cdd|30838 : 322.0) no description available & (reliability: 1554.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf06738_74384-84410' '(at2g41680 : 784.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 472.0) no description available & (gnl|cdd|30838 : 325.0) no description available & (reliability: 1568.0) & (original description: Putative NTRC, Description = NADPH-dependent thioredoxin reductase 3, PFAM = PF07992;PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf06958_164713-167360' '(gnl|cdd|36125 : 125.0) no description available & (at5g39950 : 119.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|48496 : 116.0) no description available & (q39362|trxh2_brana : 98.6) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 238.0) & (original description: Putative TRX2, Description = Thioredoxin H2, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf07006_22701-27236' '(at3g06730 : 212.0) Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.; Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink). & (gnl|cdd|36125 : 83.0) no description available & (gnl|cdd|84504 : 80.6) no description available & (reliability: 424.0) & (original description: Putative CITRX2, Description = Thioredoxin-like protein CITRX2, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf07229_79807-124713' '(at4g29670 : 249.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 111.0) no description available & (reliability: 498.0) & (original description: Putative trx2, Description = Thioredoxin-like 2, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf07610_13147-16339' '(at1g08570 : 245.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 490.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf07619_6928-12744' '(at3g08710 : 200.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 125.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 97.2) no description available & (reliability: 400.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf08191_248120-253977' '(at1g53300 : 622.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 138.0) no description available & (gnl|cdd|48496 : 85.7) no description available & (reliability: 1244.0) & (original description: Putative TTL4, Description = TPR repeat-containing thioredoxin TTL4, PFAM = PF13414;PF00085;PF00515)' T
'21.1' 'redox.thioredoxin' 'niben101scf08580_5678-11520' '(at5g66410 : 259.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 170.0) no description available & (reliability: 518.0) & (original description: Putative phlp3, Description = Phosducin-like protein 3, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf09028_106511-116212' '(at3g17880 : 369.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 226.0) no description available & (q42443|trxh_orysa : 115.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 104.0) no description available & (reliability: 738.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf09321_318139-323142' '(at4g29670 : 215.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 113.0) no description available & (gnl|cdd|48496 : 82.2) no description available & (reliability: 430.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf09686_11661-18057' '(gnl|cdd|35625 : 520.0) no description available & (at2g17420 : 501.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 321.0) no description available & (reliability: 1002.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992)' T
'21.1' 'redox.thioredoxin' 'niben101scf10309_231826-237685' '(at1g50320 : 170.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|84504 : 114.0) no description available & (gnl|cdd|36128 : 103.0) no description available & (p23400|trxm_chlre : 85.5) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 340.0) & (original description: Putative trxB, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf10490_78395-82085' '(p29449|trxh1_tobac : 216.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 166.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (gnl|cdd|48496 : 112.0) no description available & (reliability: 332.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf13103_226779-232096' '(at5g66410 : 288.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 172.0) no description available & (reliability: 576.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf13180_86083-93443' '(gnl|cdd|35625 : 521.0) no description available & (at2g17420 : 502.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 321.0) no description available & (reliability: 1004.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T
'21.1' 'redox.thioredoxin' 'niben101scf15049_98579-103461' '(at3g06730 : 214.0) Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.; Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink). & (gnl|cdd|36125 : 83.8) no description available & (gnl|cdd|84504 : 80.2) no description available & (reliability: 428.0) & (original description: Putative CITRX2, Description = Thioredoxin-like protein CITRX2, chloroplastic, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf25265_11312-13968' '(at5g39950 : 166.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|36125 : 132.0) no description available & (gnl|cdd|48496 : 118.0) no description available & (q39362|trxh2_brana : 116.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 332.0) & (original description: Putative trx3, Description = Thioredoxin 3, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf25430_86606-92271' '(at1g53300 : 617.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 144.0) no description available & (gnl|cdd|48496 : 85.3) no description available & (reliability: 1234.0) & (original description: Putative BnaA03g56720D, Description = BnaA03g56720D protein, PFAM = PF13414;PF00085;PF00515)' T
'21.1' 'redox.thioredoxin' 'niben101scf33433_42092-50364' '(at5g04260 : 179.0) Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 2 (WCRKC2); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 1 (TAIR:AT5G06690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BnaC01g21030D, Description = BnaC01g21030D protein, PFAM = PF00085)' T
'21.1' 'redox.thioredoxin' 'niben101scf39137_1-8252' '(at3g03860 : 263.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 170.0) no description available & (gnl|cdd|48548 : 118.0) no description available & (reliability: 526.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.3scaffold3009_23110-33729' '(at3g20560 : 692.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 190.0) no description available & (gnl|cdd|37878 : 173.0) no description available & (reliability: 1384.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF07970;PF00085;PF13850)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.3scaffold22111_18495-27771' '(at3g16110 : 611.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 380.0) no description available & (p29828|pdi_medsa : 179.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 106.0) no description available & (reliability: 1222.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.5scaffold356_693282-814973' '(q43116|pdi_ricco : 617.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 590.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 389.0) no description available & (gnl|cdd|48544 : 133.0) no description available & (reliability: 1180.0) & (original description: Putative PGSC0003DMG400004150, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.5scaffold1997_244844-249940' '(p29828|pdi_medsa : 486.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 463.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 314.0) no description available & (gnl|cdd|48544 : 105.0) no description available & (reliability: 926.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00004540ctg015_2-6405' '(at1g35620 : 400.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 104.0) no description available & (reliability: 800.0) & (original description: Putative PDI8, Description = Protein disulfide isomerase-like protein, PFAM = PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00005161ctg000_5647-13150' '(at1g35620 : 406.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 98.5) no description available & (reliability: 812.0) & (original description: Putative PDI8, Description = Protein disulfide isomerase-like protein, PFAM = PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00009718ctg008_1-3163' '(at5g60640 : 298.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 209.0) no description available & (gnl|cdd|48510 : 111.0) no description available & (q43116|pdi_ricco : 94.4) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (reliability: 596.0) & (original description: Putative p4hb, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00013667ctg004_1114-8365' '(q43116|pdi_ricco : 691.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 625.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 415.0) no description available & (gnl|cdd|48544 : 134.0) no description available & (reliability: 1250.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00014930ctg014_1801-7156' '(at5g60640 : 362.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 230.0) no description available & (q43116|pdi_ricco : 131.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48510 : 126.0) no description available & (reliability: 724.0) & (original description: Putative 784, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00039262ctg000_1327-10112' '(at1g04980 : 598.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|35412 : 271.0) no description available & (gnl|cdd|48532 : 181.0) no description available & (p38661|pdia6_medsa : 129.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 1196.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00332_459356-466898' '(p38661|pdia6_medsa : 539.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 531.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (gnl|cdd|35412 : 226.0) no description available & (gnl|cdd|48547 : 173.0) no description available & (reliability: 1062.0) & (original description: Putative pdi, Description = Protein disulfide isomerase, PFAM = PF07749;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00466_449006-456919' '(p38661|pdia6_medsa : 536.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 523.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (gnl|cdd|35412 : 228.0) no description available & (gnl|cdd|48547 : 171.0) no description available & (reliability: 1046.0) & (original description: Putative pdi, Description = Protein disulfide isomerase, PFAM = PF00085;PF00085;PF07749)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00494_498690-506683' '(at1g35620 : 469.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 144.0) no description available & (q43116|pdi_ricco : 120.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48510 : 110.0) no description available & (reliability: 938.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01027_241076-247013' '(p29828|pdi_medsa : 502.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 485.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 353.0) no description available & (gnl|cdd|48510 : 108.0) no description available & (reliability: 970.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01374_242621-252141' '(at3g16110 : 604.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 374.0) no description available & (p29828|pdi_medsa : 179.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 107.0) no description available & (reliability: 1208.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01594_505631-511262' '(q43116|pdi_ricco : 601.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 578.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 412.0) no description available & (gnl|cdd|48544 : 134.0) no description available & (reliability: 1156.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03012_484575-492760' '(at1g35620 : 467.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 159.0) no description available & (gnl|cdd|48510 : 114.0) no description available & (q43116|pdi_ricco : 111.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (reliability: 934.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03044_9196-22791' '(at3g20560 : 694.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 191.0) no description available & (gnl|cdd|37878 : 176.0) no description available & (reliability: 1388.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF00085;PF13850;PF07970)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03226_365670-371996' '(p29828|pdi_medsa : 525.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 504.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 348.0) no description available & (gnl|cdd|48510 : 108.0) no description available & (reliability: 1008.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf04494_20178-29454' '(at3g16110 : 568.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 354.0) no description available & (p29828|pdi_medsa : 167.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 106.0) no description available & (reliability: 1136.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf04582_347753-363790' '(q43116|pdi_ricco : 604.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 582.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 381.0) no description available & (gnl|cdd|48544 : 127.0) no description available & (reliability: 1164.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf05372_209651-217463' '(at5g60640 : 570.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 370.0) no description available & (p52588|pdi_maize : 195.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Zea mays (Maize) & (gnl|cdd|48544 : 131.0) no description available & (reliability: 1140.0) & (original description: Putative P4HB, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf05405_870799-881966' '(at5g60640 : 582.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 391.0) no description available & (q43116|pdi_ricco : 189.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48544 : 148.0) no description available & (reliability: 1164.0) & (original description: Putative P4HB, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf07423_398068-407493' '(at1g07960 : 184.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.; PDI-like 5-1 (PDIL5-1); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT2G47470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48554 : 107.0) no description available & (gnl|cdd|35412 : 94.5) no description available & (reliability: 368.0) & (original description: Putative PDIL5-1, Description = Protein disulfide-isomerase 5-1, PFAM = PF00085)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf07533_394922-402590' '(at1g04980 : 301.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|48532 : 182.0) no description available & (gnl|cdd|35412 : 89.5) no description available & (reliability: 602.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf09264_31184-44090' '(at5g60640 : 660.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 407.0) no description available & (q43116|pdi_ricco : 226.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48544 : 149.0) no description available & (reliability: 1320.0) & (original description: Putative pdi, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf10505_133919-159818' '(q43116|pdi_ricco : 573.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 552.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 381.0) no description available & (gnl|cdd|48544 : 132.0) no description available & (reliability: 1104.0) & (original description: Putative PDI, Description = Protein disulfide isomerase, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf10528_184861-191845' '(q43116|pdi_ricco : 662.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 608.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 418.0) no description available & (gnl|cdd|48544 : 136.0) no description available & (reliability: 1216.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T
'21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf33522_28464-37579' '(at1g04980 : 625.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|35412 : 274.0) no description available & (gnl|cdd|48532 : 183.0) no description available & (p38661|pdia6_medsa : 140.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 1250.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF00085;PF00085)' T
'21.1.2' 'redox.thioredoxin.QSOX' 'niben101scf08388_55848-66526' '(at1g15020 : 677.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.; quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2372 Blast hits to 1975 proteins in 299 species: Archae - 18; Bacteria - 46; Metazoa - 1235; Fungi - 321; Plants - 448; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36942 : 379.0) no description available & (gnl|cdd|48541 : 119.0) no description available & (reliability: 1354.0) & (original description: Putative QSOX1, Description = Sulfhydryl oxidase 1, PFAM = PF04777;PF00085)' T
'21.1.2' 'redox.thioredoxin.QSOX' 'niben101scf11980_83650-91018' '(at1g15020 : 637.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.; quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2372 Blast hits to 1975 proteins in 299 species: Archae - 18; Bacteria - 46; Metazoa - 1235; Fungi - 321; Plants - 448; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36942 : 364.0) no description available & (gnl|cdd|48541 : 114.0) no description available & (reliability: 1274.0) & (original description: Putative QSOX1, Description = Sulfhydryl oxidase 1, PFAM = PF00085;PF04777)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 270.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold38876_1-2875' '(gnl|cdd|36832 : 185.0) no description available & (at1g14730 : 184.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 115.0) no description available & (reliability: 368.0) & (original description: Putative CYB561C, Description = Probable transmembrane ascorbate ferrireductase 3, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold43392_373-4024' '(at1g26340 : 162.0) encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro.; cytochrome B5 isoform A (CB5-A); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 4207 Blast hits to 4178 proteins in 465 species: Archae - 2; Bacteria - 26; Metazoa - 1058; Fungi - 1672; Plants - 799; Viruses - 3; Other Eukaryotes - 647 (source: NCBI BLink). & (gnl|cdd|35757 : 120.0) no description available & (p49098|cyb5_tobac : 115.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 111.0) no description available & (reliability: 324.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold60610_976-10771' '(at2g25080 : 291.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 287.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 267.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (reliability: 582.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold75461_993-5656' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 143.0) no description available & (reliability: 872.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold1546_17778-27828' '(at5g59540 : 117.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59530.1); Has 7263 Blast hits to 7229 proteins in 962 species: Archae - 0; Bacteria - 1031; Metazoa - 70; Fungi - 654; Plants - 4685; Viruses - 0; Other Eukaryotes - 823 (source: NCBI BLink). & (o04847|dv4h_catro : 93.6) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 83.5) no description available & (reliability: 220.0) & (original description: Putative BnaA09g50540D, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold3164_84944-98626' '(gnl|cdd|35365 : 268.0) no description available & (at1g06650 : 247.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G06640.1); Has 8180 Blast hits to 8149 proteins in 985 species: Archae - 0; Bacteria - 1067; Metazoa - 118; Fungi - 802; Plants - 4889; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (o04847|dv4h_catro : 231.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 494.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold4903_2209-6241' '(at5g52240 : 208.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 165.0) no description available & (reliability: 416.0) & (original description: Putative MP1, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold5521_40017-44610' '(at1g06620 : 426.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 417.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 151.0) no description available & (reliability: 852.0) & (original description: Putative D4H, Description = Deacetoxyvindoline 4-hydroxylase, PFAM = PF14226;PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00009732ctg014_257-6558' '(q42711|mdars_cucsa : 674.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 643.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 492.0) no description available & (gnl|cdd|87424 : 183.0) no description available & (reliability: 1286.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00009817ctg010_113-2460' '(at3g48890 : 94.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 90.4) no description available & (reliability: 188.0) & (original description: Putative MSBP1, Description = Membrane-associated progesterone receptor component 1, PFAM = )' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 256.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00020533ctg002_17814-20503' '(at1g06620 : 177.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 144.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 130.0) no description available & (gnl|cdd|33294 : 90.7) no description available & (reliability: 354.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00021808ctg002_1-3503' '(at5g52240 : 216.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 171.0) no description available & (reliability: 432.0) & (original description: Putative MSBP2, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben044scf00022632ctg001_1-4235' '(at4g25570 : 272.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 224.0) no description available & (gnl|cdd|86268 : 169.0) no description available & (reliability: 544.0) & (original description: Putative CYB561A, Description = Transmembrane ascorbate ferrireductase 1, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00415_85546-89896' '(at1g06620 : 400.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 340.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 800.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00626_272517-276455' '(at5g52240 : 234.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 178.0) no description available & (reliability: 468.0) & (original description: Putative MSBP1, Description = Membrane steroid-binding protein 1, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00821_1211295-1219772' '(at3g48890 : 255.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 178.0) no description available & (reliability: 510.0) & (original description: Putative MP1, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00869_675253-682381' '(at5g09680 : 234.0) Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol.; reduced lateral root formation (RLF); FUNCTIONS IN: heme binding; INVOLVED IN: lateral root formation; LOCATED IN: cytosol; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3049 Blast hits to 3033 proteins in 420 species: Archae - 2; Bacteria - 7; Metazoa - 694; Fungi - 1150; Plants - 759; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35756 : 157.0) no description available & (gnl|cdd|84581 : 85.7) no description available & (reliability: 468.0) & (original description: Putative RLF, Description = Cytochrome b5 domain-containing protein RLF, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00951_56731-62315' '(at1g06620 : 423.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (reliability: 846.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00984_837881-841157' '(gnl|cdd|36832 : 183.0) no description available & (at1g14730 : 163.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 135.0) no description available & (reliability: 326.0) & (original description: Putative Os02g0642300, Description = Probable ascorbate-specific transmembrane electron transporter 1, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf00984_905337-909397' '(gnl|cdd|36832 : 183.0) no description available & (at1g14730 : 182.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 111.0) no description available & (reliability: 364.0) & (original description: Putative CYB561C, Description = Probable transmembrane ascorbate ferrireductase 3, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01018_165243-171932' '(p49098|cyb5_tobac : 268.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 218.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 138.0) no description available & (gnl|cdd|84581 : 113.0) no description available & (reliability: 436.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01033_325722-342682' '(gnl|cdd|35365 : 269.0) no description available & (at1g06620 : 247.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 232.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 494.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01035_575661-581958' '(at3g48890 : 176.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 150.0) no description available & (reliability: 352.0) & (original description: Putative Os02g0793700, Description = Cytochrome b5 domain-containing protein-like, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01338_388918-391332' '(at1g26100 : 122.0) Cytochrome b561/ferric reductase transmembrane protein family; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 590 Blast hits to 588 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 7; Plants - 186; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|36832 : 95.3) no description available & (reliability: 244.0) & (original description: Putative CYB561D, Description = Cytochrome B561 family protein, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01434_147876-150838' '(gnl|cdd|36832 : 163.0) no description available & (at1g14730 : 138.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 127.0) no description available & (reliability: 276.0) & (original description: Putative ZCYB, Description = Cytochrome b561 family protein, expressed, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01574_369327-373502' '(at3g19000 : 380.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 282.0) no description available & (gnl|cdd|33294 : 218.0) no description available & (p41090|fl3h_vitvi : 144.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (reliability: 760.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf01927_151000-155100' '(at1g60660 : 137.0) member of Cytochromes b5; cytochrome B5-like protein (CB5LP); FUNCTIONS IN: heme binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3645 Blast hits to 3620 proteins in 449 species: Archae - 2; Bacteria - 26; Metazoa - 975; Fungi - 1355; Plants - 764; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|35757 : 99.0) no description available & (gnl|cdd|84581 : 88.0) no description available & (reliability: 274.0) & (original description: Putative CB5LP, Description = Cytochrome B5-like protein, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_238737-242446' '(at1g06620 : 431.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 375.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (reliability: 862.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 268.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 726.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02427_428016-448042' '(gnl|cdd|35757 : 111.0) no description available & (at5g48810 : 103.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84581 : 98.0) no description available & (p49098|cyb5_tobac : 96.7) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (reliability: 206.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02526_17646-33800' '(at2g25080 : 293.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 290.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 265.0) no description available & (gnl|cdd|48492 : 244.0) no description available & (reliability: 586.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02706_85623-87922' '(at2g24940 : 155.0) membrane-associated progesterone binding protein 2 (MAPR2); FUNCTIONS IN: heme binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.2); Has 1117 Blast hits to 1108 proteins in 214 species: Archae - 2; Bacteria - 37; Metazoa - 426; Fungi - 339; Plants - 201; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|36326 : 142.0) no description available & (reliability: 310.0) & (original description: Putative MP3, Description = Probable steroid-binding protein 3, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf02910_131260-136424' '(at4g25570 : 271.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 227.0) no description available & (gnl|cdd|86268 : 167.0) no description available & (reliability: 542.0) & (original description: Putative CYB561A, Description = Transmembrane ascorbate ferrireductase 1, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03080_421735-424767' '(at3g19000 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 280.0) no description available & (gnl|cdd|33294 : 225.0) no description available & (o04706|gao1b_wheat : 151.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 740.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03080_424768-433258' '(at3g19000 : 329.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 256.0) no description available & (gnl|cdd|33294 : 203.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 658.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03265_58134-64534' '(p49098|cyb5_tobac : 256.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 215.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 139.0) no description available & (gnl|cdd|84581 : 111.0) no description available & (reliability: 430.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03488_929737-935650' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 124.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 107.0) no description available & (gnl|cdd|84581 : 96.5) no description available & (reliability: 248.0) & (original description: Putative At2g32720, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 248.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 274.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04096_306385-310649' '(at5g52240 : 206.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 170.0) no description available & (reliability: 412.0) & (original description: Putative MSBP1, Description = Membrane steroid-binding protein 1, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04117_98399-102659' '(at1g06620 : 314.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 312.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 275.0) no description available & (gnl|cdd|33294 : 158.0) no description available & (reliability: 628.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 250.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04406_392130-394459' '(at3g48890 : 129.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative Os10g0502600, Description = Os10g0502600 protein, PFAM = )' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04804_83778-88366' '(at4g25570 : 114.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 84.1) no description available & (reliability: 228.0) & (original description: Putative ZCYB, Description = Cytochrome b561, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04908_7814-18534' '(at1g06620 : 330.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 318.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 253.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 660.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF03171;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04908_15158-18296' '(at1g06620 : 187.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 162.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 97.4) no description available & (reliability: 374.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf04995_1776168-1782529' '(gnl|cdd|35757 : 107.0) no description available & (at5g48810 : 101.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 96.3) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 94.5) no description available & (reliability: 202.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf05034_564531-568459' '(at3g48890 : 232.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 177.0) no description available & (reliability: 464.0) & (original description: Putative MSBP1, Description = Membrane-associated progesterone binding protein 5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf05414_241114-252924' '(at1g26340 : 169.0) encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro.; cytochrome B5 isoform A (CB5-A); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 4207 Blast hits to 4178 proteins in 465 species: Archae - 2; Bacteria - 26; Metazoa - 1058; Fungi - 1672; Plants - 799; Viruses - 3; Other Eukaryotes - 647 (source: NCBI BLink). & (gnl|cdd|35757 : 123.0) no description available & (p49098|cyb5_tobac : 119.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 112.0) no description available & (reliability: 338.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf05582_333631-338134' '(p49099|cyb5s_tobac : 233.0) Cytochrome b5, seed isoform - Nicotiana tabacum (Common tobacco) & (at2g32720 : 200.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 125.0) no description available & (gnl|cdd|84581 : 101.0) no description available & (reliability: 400.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf05886_264629-273599' '(at2g32720 : 144.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 141.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 137.0) no description available & (gnl|cdd|84581 : 110.0) no description available & (reliability: 288.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf06078_374466-378001' '(gnl|cdd|35365 : 274.0) no description available & (at4g25420 : 206.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04707|gao1a_wheat : 200.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 193.0) no description available & (reliability: 382.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf06509_373106-386395' '(at1g60660 : 138.0) member of Cytochromes b5; cytochrome B5-like protein (CB5LP); FUNCTIONS IN: heme binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3645 Blast hits to 3620 proteins in 449 species: Archae - 2; Bacteria - 26; Metazoa - 975; Fungi - 1355; Plants - 764; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|35757 : 99.0) no description available & (gnl|cdd|84581 : 85.7) no description available & (reliability: 276.0) & (original description: Putative CB5LP, Description = Cytochrome B5-like protein, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf07678_809298-813139' '(at4g18260 : 192.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47940 : 86.4) no description available & (reliability: 384.0) & (original description: Putative At2g30890, Description = Cytochrome b561 domain-containing protein At2g30890, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf07778_236483-243486' '(q42711|mdars_cucsa : 675.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 639.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 490.0) no description available & (gnl|cdd|87424 : 186.0) no description available & (reliability: 1278.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf07833_184590-188542' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 394.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 306.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 872.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 826.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 268.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf09620_429389-438179' '(gnl|cdd|35757 : 133.0) no description available & (at2g32720 : 128.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 125.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|84581 : 109.0) no description available & (reliability: 256.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 246.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf13411_493036-505482' '(at4g14965 : 348.0) membrane-associated progesterone binding protein 4 (MAPR4); FUNCTIONS IN: heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 2 (TAIR:AT2G24940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36324 : 245.0) no description available & (reliability: 696.0) & (original description: Putative MAPR4, Description = Membrane-associated progesterone-binding protein 4, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf13530_117406-123390' '(at5g38630 : 289.0) Encodes for cytochrome b561.; cytochrome B561-1 (CYB-1); FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36832 : 210.0) no description available & (gnl|cdd|86268 : 127.0) no description available & (reliability: 578.0) & (original description: Putative CYB561B, Description = Probable transmembrane ascorbate ferrireductase 2, PFAM = PF03188)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf13856_54297-61046' '(at1g06620 : 448.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 391.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 308.0) no description available & (gnl|cdd|33294 : 169.0) no description available & (reliability: 896.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf14308_2313-5822' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 122.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 108.0) no description available & (gnl|cdd|84581 : 98.4) no description available & (reliability: 244.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.2' 'redox.ascorbate and glutathione' 'niben101scf16329_104177-110185' '(at4g18260 : 201.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47940 : 84.5) no description available & (reliability: 402.0) & (original description: Putative Sb09g028600, Description = Putative uncharacterized protein Sb09g028600, PFAM = PF03188)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold1999_79115-83175' '(at4g39830 : 686.0) Cupredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67; Bacteria - 4905; Metazoa - 456; Fungi - 3230; Plants - 1293; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (p24792|aso_cucma : 459.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|36477 : 358.0) no description available & (gnl|cdd|32315 : 134.0) no description available & (reliability: 1372.0) & (original description: Putative ao1, Description = L-ascorbate oxidase, PFAM = PF07732;PF00394;PF07731)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold6343_42406-51260' '(at4g35000 : 226.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 224.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 220.0) no description available & (reliability: 452.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold6866_532-5189' '(gnl|cdd|29386 : 400.0) no description available & (at1g07890 : 356.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 352.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 712.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold72641_1209-8707' '(at3g27820 : 706.0) Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 4 (MDAR4); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: peroxisomal membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 27219 Blast hits to 27159 proteins in 2894 species: Archae - 579; Bacteria - 21951; Metazoa - 737; Fungi - 533; Plants - 600; Viruses - 0; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|36550 : 470.0) no description available & (q40977|mdar_pea : 457.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 182.0) no description available & (reliability: 1412.0) & (original description: Putative MDAR4, Description = Monodehydroascorbate reductase 4, peroxisomal, PFAM = PF07992)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.5scaffold1001_81726-159272' '(at1g75270 : 162.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 127.0) no description available & (reliability: 324.0) & (original description: Putative DHAR, Description = Dehydroascorbate reductase, PFAM = PF13417)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00001192ctg003_25725-31918' '(at4g09010 : 424.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 83.4) no description available & (reliability: 848.0) & (original description: Putative apx, Description = Thylakoid lumenal 29 kDa protein, chloroplastic, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00009732ctg014_257-6558' '(q42711|mdars_cucsa : 674.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 643.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 492.0) no description available & (gnl|cdd|87424 : 183.0) no description available & (reliability: 1238.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00023324ctg002_2969-10964' '(at3g27820 : 706.0) Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 4 (MDAR4); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: peroxisomal membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 27219 Blast hits to 27159 proteins in 2894 species: Archae - 579; Bacteria - 21951; Metazoa - 737; Fungi - 533; Plants - 600; Viruses - 0; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|36550 : 465.0) no description available & (q40977|mdar_pea : 450.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 180.0) no description available & (reliability: 1412.0) & (original description: Putative MDAR4, Description = Monodehydroascorbate reductase 4, peroxisomal, PFAM = PF07992)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf00421_96494-107015' '(at1g63940 : 739.0) monodehydroascorbate reductase 6 (MDAR6); FUNCTIONS IN: ATP binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrion, stromule, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 32339 Blast hits to 32274 proteins in 3053 species: Archae - 745; Bacteria - 25255; Metazoa - 989; Fungi - 665; Plants - 640; Viruses - 0; Other Eukaryotes - 4045 (source: NCBI BLink). & (gnl|cdd|36550 : 463.0) no description available & (q40977|mdar_pea : 360.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 196.0) no description available & (reliability: 1478.0) & (original description: Putative MDAR5, Description = Monodehydroascorbate reductase 5, mitochondrial, PFAM = PF07992)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01166_926905-945167' '(at1g77490 : 585.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (q69sv0|apx8_orysa : 543.0) Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice) & (gnl|cdd|29386 : 366.0) no description available & (reliability: 1170.0) & (original description: Putative pAPX, Description = Chloroplast ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01664_157417-167529' '(at4g35000 : 187.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 184.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 178.0) no description available & (reliability: 374.0) & (original description: Putative gAPX, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01799_307495-313164' '(at5g16710 : 362.0) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36636 : 253.0) no description available & (gnl|cdd|48128 : 217.0) no description available & (reliability: 724.0) & (original description: Putative DHAR3, Description = Glutathione S-transferase DHAR3, chloroplastic, PFAM = PF13417)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf02367_648792-654786' '(at4g09010 : 418.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 85.3) no description available & (reliability: 836.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf02537_247766-257351' '(at4g09010 : 439.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 83.0) no description available & (reliability: 878.0) & (original description: Putative apx, Description = Thylakoid lumenal 29 kDa protein, chloroplastic, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03026_126031-130269' '(at4g39830 : 827.0) Cupredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67; Bacteria - 4905; Metazoa - 456; Fungi - 3230; Plants - 1293; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (p24792|aso_cucma : 586.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|36477 : 442.0) no description available & (gnl|cdd|32315 : 174.0) no description available & (reliability: 1654.0) & (original description: Putative ao1, Description = L-ascorbate oxidase, PFAM = PF07731;PF07732;PF00394)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03483_33945-49267' '(q40588|aso_tobac : 1104.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (at5g21105 : 773.0) Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1). & (gnl|cdd|36477 : 443.0) no description available & (gnl|cdd|32315 : 182.0) no description available & (reliability: 1546.0) & (original description: Putative AAO, Description = L-ascorbate oxidase, PFAM = PF00394;PF07732;PF07731)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03804_90037-99075' '(at1g77490 : 592.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (q69sv0|apx8_orysa : 551.0) Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice) & (gnl|cdd|29386 : 368.0) no description available & (reliability: 1184.0) & (original description: Putative APXT, Description = L-ascorbate peroxidase T, chloroplastic, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf05710_223034-230112' '(at4g35000 : 444.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|29386 : 404.0) no description available & (q6zjj1|apx4_orysa : 391.0) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative gAPX, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf06195_736-5114' '(at1g07890 : 408.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 403.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (gnl|cdd|29386 : 402.0) no description available & (reliability: 816.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07050_57830-63755' '(gnl|cdd|29386 : 408.0) no description available & (at3g09640 : 401.0) Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 2 (APX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 1 (TAIR:AT1G07890.8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fe01|apx2_orysa : 390.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 802.0) & (original description: Putative APX2, Description = L-ascorbate peroxidase 2, cytosolic, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07109_92989-108041' '(at4g35000 : 435.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|29386 : 400.0) no description available & (q6zjj1|apx4_orysa : 383.0) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (reliability: 870.0) & (original description: Putative APX, Description = Ascorbate peroxidase, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07250_273897-280914' '(at4g35000 : 432.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 423.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 400.0) no description available & (reliability: 864.0) & (original description: Putative APX3, Description = Probable L-ascorbate peroxidase 3, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07778_236483-243486' '(q42711|mdars_cucsa : 675.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 639.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 490.0) no description available & (gnl|cdd|87424 : 186.0) no description available & (reliability: 1226.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf09004_148998-168013' '(q40588|aso_tobac : 782.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (at5g21105 : 657.0) Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1). & (gnl|cdd|36477 : 356.0) no description available & (gnl|cdd|84744 : 136.0) no description available & (reliability: 1314.0) & (original description: Putative AAO, Description = L-ascorbate oxidase, PFAM = PF00394;PF07732;PF07731)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf10015_876948-882991' '(at1g75270 : 319.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 258.0) no description available & (gnl|cdd|48128 : 215.0) no description available & (reliability: 638.0) & (original description: Putative DHAR2, Description = Glutathione S-transferase DHAR2, PFAM = PF13417)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf10468_107992-113876' '(at5g16710 : 355.0) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36636 : 251.0) no description available & (gnl|cdd|48128 : 210.0) no description available & (reliability: 710.0) & (original description: Putative DHAR3, Description = Glutathione S-transferase DHAR3, chloroplastic, PFAM = PF13417)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf13259_124275-129282' '(gnl|cdd|29386 : 401.0) no description available & (at1g07890 : 378.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 367.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 756.0) & (original description: Putative APX1, Description = L-ascorbate peroxidase 1, cytosolic, PFAM = PF00141)' T
'21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf30418_78759-87803' '(at1g75270 : 315.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 256.0) no description available & (gnl|cdd|48128 : 210.0) no description available & (reliability: 630.0) & (original description: Putative DHAR1, Description = Glutathione S-transferase DHAR1, mitochondrial, PFAM = PF13410;PF13417)' T
'21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf01696_637076-641002' '(q338b5|gme1_orysa : 737.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 725.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 444.0) no description available & (gnl|cdd|30800 : 182.0) no description available & (reliability: 1450.0) & (original description: Putative blmG, Description = NAD-dependent dehydratase, PFAM = PF01370)' T
'21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf05381_167345-171981' '(q338b5|gme1_orysa : 720.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 712.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 456.0) no description available & (gnl|cdd|30800 : 177.0) no description available & (reliability: 1424.0) & (original description: Putative blmG, Description = NAD-dependent dehydratase, PFAM = PF01370)' T
'21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf30320_761-4100' '(q338b5|gme1_orysa : 444.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 436.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 275.0) no description available & (gnl|cdd|85412 : 126.0) no description available & (reliability: 872.0) & (original description: Putative GME, Description = GDP-D-mannose-3 5-epimerase, PFAM = PF01370)' T
'21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'nbv0.3scaffold6661_5654-11416' '(at4g26850 : 518.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 402.0) no description available & (reliability: 1036.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T
'21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf00069_1544140-1549902' '(at4g26850 : 491.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 383.0) no description available & (reliability: 982.0) & (original description: Putative GGP, Description = GDP-L-galactose phosphorylase, PFAM = )' T
'21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf00161_584655-589337' '(at4g26850 : 607.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 494.0) no description available & (reliability: 1214.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T
'21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf08035_93324-102125' '(at5g55120 : 526.0) Encodes a GDP-L-galactose phosphorylase, with similar biochemical properties as VTC2.; VITAMIN C DEFECTIVE 5 (VTC5); BEST Arabidopsis thaliana protein match is: mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase (GDP)s;galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT4G26850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37931 : 408.0) no description available & (reliability: 1052.0) & (original description: Putative GGP, Description = GDP-L-galactose phosphorylase, PFAM = )' T
'21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf09436_177091-182044' '(at4g26850 : 620.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 487.0) no description available & (reliability: 1240.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T
'21.2.1.3' 'redox.ascorbate and glutathione.ascorbate.L-galactose-1-phosphate phosphatase' 'nbv0.3scaffold43030_7621-18023' '(at3g02870 : 407.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 400.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 329.0) no description available & (gnl|cdd|30137 : 312.0) no description available & (reliability: 814.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T
'21.2.1.3' 'redox.ascorbate and glutathione.ascorbate.L-galactose-1-phosphate phosphatase' 'niben101scf00303_22447-29852' '(at3g02870 : 412.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 405.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 332.0) no description available & (gnl|cdd|30137 : 316.0) no description available & (reliability: 824.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T
'21.2.1.4' 'redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase' 'niben044scf00016215ctg013_1201-5436' '(at4g33670 : 516.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (gnl|cdd|36789 : 403.0) no description available & (gnl|cdd|31011 : 207.0) no description available & (q40648|kcab_orysa : 92.8) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative LGALDH, Description = L-galactose dehydrogenase, PFAM = PF00248)' T
'21.2.1.4' 'redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase' 'niben101scf07365_73033-77867' '(at4g33670 : 516.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (gnl|cdd|36789 : 401.0) no description available & (gnl|cdd|31011 : 206.0) no description available & (q40648|kcab_orysa : 93.6) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative LGALDH, Description = L-galactose dehydrogenase, PFAM = PF00248)' T
'21.2.1.5' 'redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase' 'niben044scf00023329ctg023_1-14247' '(at3g47930 : 909.0) L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis; "L-galactono-1,4-lactone dehydrogenase" (GLDH); CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Galactonolactone dehydrogenase (InterPro:IPR010029), Actin-binding FH2 (InterPro:IPR015425), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39928 : 451.0) no description available & (gnl|cdd|30625 : 109.0) no description available & (reliability: 1818.0) & (original description: Putative gldh, Description = L-galactono-1,4-lactone dehydrogenase, PFAM = PF01565;PF04030)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold6998_42664-50066' '(p80461|gshrp_tobac : 859.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 513.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 375.0) no description available & (gnl|cdd|81850 : 353.0) no description available & (reliability: 1026.0) & (original description: Putative cGR, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold26992_17140-22873' '(at5g37830 : 2141.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37150 : 1908.0) no description available & (gnl|cdd|30495 : 629.0) no description available & (reliability: 4282.0) & (original description: Putative oplah, Description = 5-oxoprolinase, PFAM = PF05378;PF01968;PF02538)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold60610_976-10771' '(at2g25080 : 291.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 287.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 267.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (reliability: 572.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold104232_1-3544' '(at1g63460 : 276.0) glutathione peroxidase 8 (GPX8); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 6 (TAIR:AT4G11600.1); Has 7264 Blast hits to 7263 proteins in 1725 species: Archae - 2; Bacteria - 3448; Metazoa - 795; Fungi - 210; Plants - 387; Viruses - 8; Other Eukaryotes - 2414 (source: NCBI BLink). & (q9lef0|gpx4_mescr : 256.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|36864 : 248.0) no description available & (gnl|cdd|48492 : 224.0) no description available & (reliability: 552.0) & (original description: Putative GPX8, Description = Probable glutathione peroxidase 8, PFAM = PF00255)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.5scaffold4321_99908-105714' '(at5g37830 : 2160.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37150 : 1931.0) no description available & (gnl|cdd|30495 : 636.0) no description available & (reliability: 4320.0) & (original description: Putative OXP1, Description = 5-oxoprolinase, PFAM = PF01968;PF05378;PF02538)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.5scaffold4396_31817-65999' '(at2g48150 : 272.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 259.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (q9lef0|gpx4_mescr : 238.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 544.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00004569ctg005_3341-18669' '(gnl|cdd|86474 : 725.0) no description available & (o23732|gshb_braju : 689.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 671.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35244 : 566.0) no description available & (reliability: 1342.0) & (original description: Putative GSH2, Description = Glutathione synthetase, chloroplastic, PFAM = PF03199;PF03917)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00010425ctg000_1-8240' '(at3g24170 : 629.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43621|gshrc_pea : 617.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (gnl|cdd|35626 : 481.0) no description available & (gnl|cdd|81850 : 417.0) no description available & (reliability: 1258.0) & (original description: Putative gr, Description = Glutathione reductase, PFAM = PF07992)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00011617ctg000_1838-5722' '(at4g39640 : 612.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 506.0) no description available & (gnl|cdd|85189 : 441.0) no description available & (reliability: 1120.0) & (original description: Putative GGT1, Description = Gamma-glutamyltranspeptidase 1, PFAM = PF01019)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00026206ctg021_1335-8026' '(p80461|gshrp_tobac : 1046.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 847.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 642.0) no description available & (gnl|cdd|81850 : 601.0) no description available & (reliability: 1694.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992;PF07992)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00011_24739-108517' '(at2g48150 : 269.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 258.0) no description available & (gnl|cdd|48492 : 243.0) no description available & (q9lef0|gpx4_mescr : 234.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 538.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00551_206212-212858' '(at4g29210 : 755.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.; gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 632.0) no description available & (gnl|cdd|85189 : 557.0) no description available & (reliability: 1510.0) & (original description: Putative GGT3, Description = Gamma-glutamyltranspeptidase 3, PFAM = PF01019)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00963_230252-240160' '(gnl|cdd|86474 : 727.0) no description available & (o23732|gshb_braju : 689.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 681.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35244 : 566.0) no description available & (reliability: 1362.0) & (original description: Putative GSH2, Description = Glutathione synthetase, chloroplastic, PFAM = PF03199;PF03917)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01177_264885-273322' '(at4g39640 : 389.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 318.0) no description available & (gnl|cdd|85189 : 266.0) no description available & (reliability: 714.0) & (original description: Putative GGT4, Description = Putative inactive gamma-glutamyltranspeptidase 4, PFAM = PF01019)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01339_753764-759637' '(at2g31570 : 269.0) glutathione peroxidase GPx; glutathione peroxidase 2 (GPX2); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7463 Blast hits to 7462 proteins in 1754 species: Archae - 2; Bacteria - 3597; Metazoa - 796; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2467 (source: NCBI BLink). & (gnl|cdd|36864 : 257.0) no description available & (p30708|gpx4_nicsy : 244.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (6P229) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|48492 : 242.0) no description available & (reliability: 538.0) & (original description: Putative GPX2, Description = Probable glutathione peroxidase 2, PFAM = PF00255)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01927_703957-710389' '(at4g29210 : 761.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.; gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 636.0) no description available & (gnl|cdd|85189 : 555.0) no description available & (reliability: 1522.0) & (original description: Putative GGT3, Description = Gamma-glutamyltranspeptidase 3, PFAM = PF01019)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf02469_84488-99130' '(p80461|gshrp_tobac : 1055.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 865.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 663.0) no description available & (gnl|cdd|81850 : 620.0) no description available & (reliability: 1730.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf02526_17646-33800' '(at2g25080 : 293.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 290.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 265.0) no description available & (gnl|cdd|48492 : 244.0) no description available & (reliability: 578.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf03208_196614-211546' '(q43621|gshrc_pea : 827.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (at3g24170 : 821.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35626 : 644.0) no description available & (gnl|cdd|81850 : 570.0) no description available & (reliability: 1642.0) & (original description: Putative gr, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf05417_293386-302006' '(at4g23100 : 861.0) Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.; glutamate-cysteine ligase (GSH1); CONTAINS InterPro DOMAIN/s: Glutamate--cysteine ligase, GCS2 (InterPro:IPR006336), Glutamate--cysteine ligase, plant (InterPro:IPR011556). & (o23736|gsh1_braju : 858.0) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard) & (gnl|cdd|33374 : 569.0) no description available & (reliability: 1722.0) & (original description: Putative GSH1, Description = Glutamate--cysteine ligase, chloroplastic, PFAM = PF04107)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf06369_288001-292547' '(q9fxs3|gpx4_tobac : 333.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (Nt-SubC08) - Nicotiana tabacum (Common tobacco) & (at4g11600 : 282.0) Encodes glutathione peroxidase.; glutathione peroxidase 6 (GPX6); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, response to metal ion; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7601 Blast hits to 7600 proteins in 1766 species: Archae - 2; Bacteria - 3728; Metazoa - 790; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2480 (source: NCBI BLink). & (gnl|cdd|36864 : 261.0) no description available & (gnl|cdd|48492 : 238.0) no description available & (reliability: 564.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf06369_423087-433830' '(at4g23100 : 874.0) Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.; glutamate-cysteine ligase (GSH1); CONTAINS InterPro DOMAIN/s: Glutamate--cysteine ligase, GCS2 (InterPro:IPR006336), Glutamate--cysteine ligase, plant (InterPro:IPR011556). & (o23736|gsh1_braju : 870.0) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard) & (gnl|cdd|33374 : 576.0) no description available & (reliability: 1748.0) & (original description: Putative GSH1, Description = Glutamate--cysteine ligase, chloroplastic, PFAM = PF04107)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf07748_7868-15270' '(p80461|gshrp_tobac : 1065.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 861.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 657.0) no description available & (gnl|cdd|81850 : 617.0) no description available & (reliability: 1722.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf09459_46362-62078' '(q43621|gshrc_pea : 821.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (at3g24170 : 817.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35626 : 641.0) no description available & (gnl|cdd|81850 : 569.0) no description available & (reliability: 1634.0) & (original description: Putative cGR, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T
'21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf11299_159245-165100' '(at2g48150 : 242.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 242.0) no description available & (gnl|cdd|48492 : 228.0) no description available & (o23814|gpx4_spiol : 219.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Spinacia oleracea (Spinach) & (reliability: 484.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255)' T
'21.3' 'redox.heme' 'nbv0.3scaffold12877_11066-14526' '(q93y92|hbl2_goshi : 216.0) Non-symbiotic hemoglobin 2 (Hb2) (GOShi GLB2) - Gossypium hirsutum (Upland cotton) & (at3g10520 : 209.0) class 2 non-symbiotic hemoglobin; haemoglobin 2 (HB2); FUNCTIONS IN: oxygen transporter activity; INVOLVED IN: response to cytokinin stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: hemoglobin 1 (TAIR:AT2G16060.1); Has 878 Blast hits to 840 proteins in 285 species: Archae - 0; Bacteria - 313; Metazoa - 196; Fungi - 34; Plants - 318; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|29979 : 97.8) no description available & (reliability: 418.0) & (original description: Putative HB2, Description = Non-symbiotic hemoglobin 2, PFAM = PF00042)' T
'21.3' 'redox.heme' 'niben044scf00018262ctg018_3515-8759' '(at4g32690 : 273.0) Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.; hemoglobin 3 (GLB3); CONTAINS InterPro DOMAIN/s: Globin, truncated bacterial-like (InterPro:IPR001486), Globin-like (InterPro:IPR009050), Globin (InterPro:IPR012292); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85274 : 131.0) no description available & (reliability: 546.0) & (original description: Putative GLB3, Description = Two-on-two hemoglobin-3, PFAM = PF01152)' T
'21.3' 'redox.heme' 'niben101scf02182_105563-109655' '(q93y92|hbl2_goshi : 218.0) Non-symbiotic hemoglobin 2 (Hb2) (GOShi GLB2) - Gossypium hirsutum (Upland cotton) & (at3g10520 : 214.0) class 2 non-symbiotic hemoglobin; haemoglobin 2 (HB2); FUNCTIONS IN: oxygen transporter activity; INVOLVED IN: response to cytokinin stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: hemoglobin 1 (TAIR:AT2G16060.1); Has 878 Blast hits to 840 proteins in 285 species: Archae - 0; Bacteria - 313; Metazoa - 196; Fungi - 34; Plants - 318; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|29979 : 93.6) no description available & (reliability: 428.0) & (original description: Putative LBII, Description = Leghemoglobin-2, PFAM = PF00042)' T
'21.3' 'redox.heme' 'niben101scf06068_134716-141183' '(at4g32690 : 271.0) Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.; hemoglobin 3 (GLB3); CONTAINS InterPro DOMAIN/s: Globin, truncated bacterial-like (InterPro:IPR001486), Globin-like (InterPro:IPR009050), Globin (InterPro:IPR012292); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85274 : 131.0) no description available & (reliability: 542.0) & (original description: Putative GLB3, Description = Two-on-two hemoglobin-3, PFAM = PF01152)' T
'21.3' 'redox.heme' 'niben101scf07645_452289-471445' '(at3g10130 : 316.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT5G20140.1); Has 1532 Blast hits to 1528 proteins in 169 species: Archae - 17; Bacteria - 184; Metazoa - 176; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink). & (gnl|cdd|68407 : 160.0) no description available & (reliability: 632.0) & (original description: Putative At3g10130, Description = Heme-binding-like protein At3g10130, chloroplastic, PFAM = PF04832)' T
'21.3' 'redox.heme' 'niben101scf08328_12233-17700' '(at5g20140 : 517.0) SOUL heme-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790), SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1). & (gnl|cdd|68407 : 119.0) no description available & (reliability: 1034.0) & (original description: Putative Os06g0597900, Description = Os06g0597900 protein, PFAM = PF04832;PF10184)' T
'21.3' 'redox.heme' 'niben101scf10842_123725-127719' '(q9fvl0|hbl1_medsa : 234.0) Non-symbiotic hemoglobin 1 (MEDsa GLB1) - Medicago sativa (Alfalfa) & (at2g16060 : 214.0) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.; hemoglobin 1 (HB1); FUNCTIONS IN: oxygen binding; INVOLVED IN: response to hypoxia; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: haemoglobin 2 (TAIR:AT3G10520.1); Has 783 Blast hits to 745 proteins in 194 species: Archae - 0; Bacteria - 173; Metazoa - 274; Fungi - 3; Plants - 318; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|29979 : 95.9) no description available & (reliability: 428.0) & (original description: Putative MHB1, Description = Non-symbiotic hemoglobin 1, PFAM = PF00042)' T
'21.4' 'redox.glutaredoxins' 'nbv0.3scaffold23684_23924-27140' '(at4g10630 : 275.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G32760.1); Has 492 Blast hits to 487 proteins in 66 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38035 : 251.0) no description available & (gnl|cdd|48580 : 205.0) no description available & (reliability: 550.0) & (original description: Putative BnaA09g24210D, Description = BnaA09g24210D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.3scaffold26339_20002-22370' '(at3g02000 : 130.0) Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).; ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36963 : 123.0) no description available & (gnl|cdd|48634 : 97.9) no description available & (reliability: 260.0) & (original description: Putative GRXC8, Description = Glutaredoxin-C8, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.3scaffold39267_17009-19773' '(at3g11920 : 233.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|48576 : 110.0) no description available & (reliability: 466.0) & (original description: Putative At3g11920, Description = Dishevelled/Egl-10/leckstrin domain protein, PFAM = PF00610;PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.5scaffold926_322132-356972' '(at5g20500 : 174.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 130.0) no description available & (gnl|cdd|36963 : 129.0) no description available & (p55143|glrx_ricco : 97.8) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 348.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.5scaffold1148_168789-183007' '(at3g11920 : 629.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|68359 : 142.0) no description available & (reliability: 1258.0) & (original description: Putative PGSC0003DMG400016401, Description = Electron transporter, putative, PFAM = PF00610;PF04784;PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.5scaffold1561_225018-228472' '(at1g64500 : 247.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 204.0) no description available & (gnl|cdd|48580 : 192.0) no description available & (reliability: 494.0) & (original description: Putative At1g64500, Description = F1N19.7, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'nbv0.5scaffold2236_175936-181819' '(at5g13810 : 147.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 127.0) no description available & (gnl|cdd|48580 : 114.0) no description available & (reliability: 294.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = )' T
'21.4' 'redox.glutaredoxins' 'niben044scf00001656ctg002_1-2575' '(at4g10630 : 272.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G32760.1); Has 492 Blast hits to 487 proteins in 66 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38035 : 249.0) no description available & (gnl|cdd|48580 : 200.0) no description available & (reliability: 544.0) & (original description: Putative At1g32760, Description = At1g32760, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben044scf00010493ctg005_618-4033' '(at2g41330 : 287.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 590 Blast hits to 589 proteins in 102 species: Archae - 0; Bacteria - 67; Metazoa - 107; Fungi - 0; Plants - 381; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38035 : 239.0) no description available & (gnl|cdd|48580 : 217.0) no description available & (reliability: 574.0) & (original description: Putative BnaA09g36420D, Description = BnaA09g36420D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben044scf00012113ctg004_1-2131' '(at1g77370 : 105.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G20500.1); Has 6011 Blast hits to 6006 proteins in 1282 species: Archae - 24; Bacteria - 3163; Metazoa - 423; Fungi - 346; Plants - 622; Viruses - 111; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|48634 : 98.7) no description available & (gnl|cdd|36963 : 94.5) no description available & (reliability: 210.0) & (original description: Putative GLU1, Description = Glutaredoxin-C4, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben044scf00018132ctg005_838-3778' '(gnl|cdd|38035 : 152.0) no description available & (at5g06470 : 143.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 140.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG402021334, Description = Glutaredoxin family protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben044scf00019221ctg006_5559-21453' '(at5g13810 : 145.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 128.0) no description available & (gnl|cdd|48580 : 119.0) no description available & (reliability: 290.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = )' T
'21.4' 'redox.glutaredoxins' 'niben044scf00019943ctg008_1-3934' '(at4g08550 : 391.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (gnl|cdd|68359 : 169.0) no description available & (reliability: 782.0) & (original description: Putative v1g128201, Description = Electron transporter, putative, PFAM = PF04784)' T
'21.4' 'redox.glutaredoxins' 'niben044scf00023808ctg018_7756-10064' '(at4g15660 : 150.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1520 Blast hits to 1515 proteins in 222 species: Archae - 0; Bacteria - 20; Metazoa - 424; Fungi - 241; Plants - 751; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|36963 : 135.0) no description available & (gnl|cdd|48634 : 109.0) no description available & (reliability: 300.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00082_293023-295328' '(at3g21460 : 163.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15700.1); Has 1364 Blast hits to 1360 proteins in 220 species: Archae - 0; Bacteria - 35; Metazoa - 262; Fungi - 243; Plants - 766; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36963 : 134.0) no description available & (gnl|cdd|48634 : 113.0) no description available & (reliability: 326.0) & (original description: Putative GRXS10, Description = Monothiol glutaredoxin-S10, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00082_523530-525838' '(at4g15660 : 154.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1520 Blast hits to 1515 proteins in 222 species: Archae - 0; Bacteria - 20; Metazoa - 424; Fungi - 241; Plants - 751; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|36963 : 137.0) no description available & (gnl|cdd|48634 : 109.0) no description available & (reliability: 308.0) & (original description: Putative GRXS3, Description = Monothiol glutaredoxin-S3, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00109_529907-532275' '(at3g02000 : 127.0) Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).; ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36963 : 123.0) no description available & (gnl|cdd|48634 : 96.4) no description available & (reliability: 254.0) & (original description: Putative GRX3, Description = Glutaredoxin, grx, putative, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00123_721495-726000' '(at3g15660 : 220.0) glutaredoxin 4 (GRX4); FUNCTIONS IN: metal ion binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48577 : 148.0) no description available & (gnl|cdd|36129 : 143.0) no description available & (reliability: 440.0) & (original description: Putative GRXS15, Description = Monothiol glutaredoxin-S15, mitochondrial, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00132_141578-146488' '(at1g64500 : 248.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 206.0) no description available & (gnl|cdd|48580 : 193.0) no description available & (reliability: 496.0) & (original description: Putative At1g64500, Description = F1N19.7, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00445_37715-40107' '(gnl|cdd|36963 : 133.0) no description available & (at5g14070 : 121.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 111.0) no description available & (reliability: 242.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00525_158613-161758' '(gnl|cdd|38035 : 202.0) no description available & (at5g06470 : 200.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 196.0) no description available & (reliability: 400.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00597_634760-640304' '(at4g28730 : 179.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G20270.1); Has 4412 Blast hits to 4405 proteins in 1169 species: Archae - 6; Bacteria - 1982; Metazoa - 422; Fungi - 333; Plants - 692; Viruses - 111; Other Eukaryotes - 866 (source: NCBI BLink). & (gnl|cdd|36963 : 133.0) no description available & (gnl|cdd|48634 : 121.0) no description available & (p55142|glrx_orysa : 100.0) Glutaredoxin - Oryza sativa (Rice) & (reliability: 358.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00782_119120-122262' '(gnl|cdd|38035 : 202.0) no description available & (at5g06470 : 199.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 193.0) no description available & (reliability: 398.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00823_1-2041' '(at3g62950 : 157.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G47870.1); Has 1580 Blast hits to 1576 proteins in 382 species: Archae - 0; Bacteria - 356; Metazoa - 244; Fungi - 174; Plants - 738; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 122.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 314.0) & (original description: Putative GRXC11, Description = Glutaredoxin-C11, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00823_52020-54322' '(at2g47880 : 147.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 121.0) no description available & (gnl|cdd|48634 : 94.0) no description available & (reliability: 294.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf00885_1164477-1166866' '(gnl|cdd|36963 : 114.0) no description available & (at5g14070 : 112.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 96.0) no description available & (p55143|glrx_ricco : 87.8) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 224.0) & (original description: Putative GRXC3, Description = Glutaredoxin-C3, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01078_152903-157935' '(at5g63030 : 173.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G40370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p55143|glrx_ricco : 150.0) Glutaredoxin - Ricinus communis (Castor bean) & (gnl|cdd|36963 : 136.0) no description available & (gnl|cdd|48634 : 129.0) no description available & (reliability: 346.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01177_648944-651249' '(at1g03020 : 122.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 121.0) no description available & (gnl|cdd|48634 : 107.0) no description available & (reliability: 244.0) & (original description: Putative GRXS1, Description = Monothiol glutaredoxin-S1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01274_598400-601467' '(at3g57070 : 243.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink). & (gnl|cdd|38035 : 228.0) no description available & (gnl|cdd|48580 : 201.0) no description available & (reliability: 486.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01326_710239-713534' '(at3g28850 : 318.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 204.0) no description available & (reliability: 636.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01362_247556-250560' '(at5g39865 : 271.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G28850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38035 : 230.0) no description available & (gnl|cdd|48580 : 202.0) no description available & (reliability: 542.0) & (original description: Putative BnaAnng33180D, Description = BnaAnng33180D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01433_213249-225288' '(at1g77370 : 144.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G20500.1); Has 6011 Blast hits to 6006 proteins in 1282 species: Archae - 24; Bacteria - 3163; Metazoa - 423; Fungi - 346; Plants - 622; Viruses - 111; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|48634 : 119.0) no description available & (gnl|cdd|36963 : 117.0) no description available & (p55143|glrx_ricco : 83.2) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 288.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01462_640-3053' '(at1g28480 : 137.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 103.0) no description available & (reliability: 274.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01758_93106-95411' '(at5g18600 : 138.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 105.0) no description available & (reliability: 276.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01758_181435-183740' '(at3g62930 : 129.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 113.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 258.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01777_173367-175807' '(at4g33040 : 142.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|36963 : 105.0) no description available & (gnl|cdd|48634 : 83.6) no description available & (reliability: 284.0) & (original description: Putative GRXC7, Description = Glutaredoxin-C7, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf01998_529575-532015' '(at4g33040 : 145.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|36963 : 105.0) no description available & (gnl|cdd|48634 : 84.0) no description available & (reliability: 290.0) & (original description: Putative GRXC6, Description = Glutaredoxin-C6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf02253_82474-85736' '(at3g28850 : 275.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 216.0) no description available & (gnl|cdd|48580 : 204.0) no description available & (reliability: 550.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf02457_105171-107470' '(at2g47880 : 150.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 126.0) no description available & (gnl|cdd|48634 : 98.7) no description available & (reliability: 300.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf02996_83688-86083' '(at5g14070 : 142.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36963 : 135.0) no description available & (gnl|cdd|48634 : 114.0) no description available & (p55143|glrx_ricco : 80.5) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 284.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf03169_599397-601798' '(gnl|cdd|36963 : 98.4) no description available & (at1g28480 : 82.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative GRX1, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf03427_966327-968986' '(at1g28480 : 105.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 99.1) no description available & (reliability: 210.0) & (original description: Putative GRX6, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04019_208375-210680' '(at3g62930 : 136.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 127.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 272.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04173_72638-75087' '(at1g28480 : 143.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 98.8) no description available & (reliability: 286.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04448_160124-168339' '(at5g13810 : 251.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 222.0) no description available & (gnl|cdd|48580 : 213.0) no description available & (reliability: 502.0) & (original description: Putative Grx, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04500_212222-214527' '(at3g62930 : 127.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 113.0) no description available & (gnl|cdd|48634 : 103.0) no description available & (reliability: 254.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04500_301238-303543' '(at5g18600 : 137.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 105.0) no description available & (reliability: 274.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04555_52872-64182' '(at5g20500 : 176.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 131.0) no description available & (gnl|cdd|36963 : 129.0) no description available & (p55143|glrx_ricco : 99.0) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 352.0) & (original description: Putative GRX, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04792_90760-93227' '(at1g28480 : 132.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 96.8) no description available & (reliability: 264.0) & (original description: Putative GRX6, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04921_182072-185013' '(gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 202.0) no description available & (at5g06470 : 191.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf04934_198176-201107' '(gnl|cdd|38035 : 146.0) no description available & (at5g06470 : 141.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 134.0) no description available & (reliability: 282.0) & (original description: Putative PGSC0003DMG402021334, Description = Glutaredoxin family protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf05078_207437-209763' '(gnl|cdd|36963 : 130.0) no description available & (at5g14070 : 123.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 110.0) no description available & (reliability: 246.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf06172_424910-428199' '(at3g28850 : 312.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 205.0) no description available & (reliability: 624.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf06345_409519-411824' '(at1g03020 : 127.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 102.0) no description available & (gnl|cdd|48634 : 81.3) no description available & (reliability: 254.0) & (original description: Putative GRX1, Description = GRX1 protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf06486_703377-709785' '(at5g20500 : 176.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 131.0) no description available & (gnl|cdd|36963 : 130.0) no description available & (p55143|glrx_ricco : 98.2) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 352.0) & (original description: Putative GRXC4, Description = Glutaredoxin-C4, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf06504_108087-112222' '(at1g64500 : 263.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 211.0) no description available & (gnl|cdd|48580 : 194.0) no description available & (reliability: 526.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf09097_220470-237646' '(at3g11920 : 233.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|48576 : 110.0) no description available & (reliability: 466.0) & (original description: Putative At3g11920, Description = Dishevelled/Egl-10/leckstrin domain protein, PFAM = PF00462;PF00610)' T
'21.4' 'redox.glutaredoxins' 'niben101scf11245_16136-18441' '(at1g03020 : 134.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 125.0) no description available & (gnl|cdd|48634 : 110.0) no description available & (reliability: 268.0) & (original description: Putative GRX3, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf11251_45109-47843' '(gnl|cdd|38035 : 209.0) no description available & (at5g58530 : 208.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G13810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 195.0) no description available & (reliability: 416.0) & (original description: Putative BnaA02g07580D, Description = BnaA02g07580D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf13683_278547-281755' '(at3g57070 : 293.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink). & (gnl|cdd|38035 : 242.0) no description available & (gnl|cdd|48580 : 217.0) no description available & (reliability: 586.0) & (original description: Putative BnaA09g36420D, Description = BnaA09g36420D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf13748_70491-72548' '(at3g62930 : 134.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 126.0) no description available & (gnl|cdd|48634 : 103.0) no description available & (reliability: 268.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf14591_118825-122048' '(at5g03870 : 251.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 199.0) no description available & (gnl|cdd|48580 : 179.0) no description available & (reliability: 502.0) & (original description: Putative BnaAnng00840D, Description = BnaAnng00840D protein, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf16127_38505-40810' '(at4g15700 : 140.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15690.1); Has 1720 Blast hits to 1715 proteins in 241 species: Archae - 0; Bacteria - 36; Metazoa - 499; Fungi - 318; Plants - 755; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|36963 : 128.0) no description available & (gnl|cdd|48634 : 101.0) no description available & (reliability: 280.0) & (original description: Putative GRXS3, Description = Monothiol glutaredoxin-S3, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf17164_160698-164404' '(at5g40370 : 164.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G63030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p55143|glrx_ricco : 161.0) Glutaredoxin - Ricinus communis (Castor bean) & (gnl|cdd|36963 : 139.0) no description available & (gnl|cdd|48634 : 136.0) no description available & (reliability: 328.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf17477_35870-38175' '(at3g62930 : 135.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 112.0) no description available & (gnl|cdd|48634 : 97.9) no description available & (reliability: 270.0) & (original description: Putative GRX1, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf17511_203172-205480' '(at1g03020 : 137.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 104.0) no description available & (reliability: 274.0) & (original description: Putative GRXS1, Description = Monothiol glutaredoxin-S1, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf20325_36295-38594' '(at2g47880 : 136.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 120.0) no description available & (gnl|cdd|48634 : 96.0) no description available & (reliability: 272.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf22538_11959-14771' '(at5g13810 : 247.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 205.0) no description available & (gnl|cdd|48580 : 191.0) no description available & (reliability: 494.0) & (original description: Putative Grx, Description = Glutaredoxin, PFAM = PF00462)' T
'21.4' 'redox.glutaredoxins' 'niben101scf31742_98245-100658' '(at1g28480 : 134.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 104.0) no description available & (reliability: 268.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T
'21.5' 'redox.peroxiredoxin' 'nbv0.3scaffold91465_1188-5206' '(at3g26060 : 274.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 209.0) no description available & (gnl|cdd|48566 : 184.0) no description available & (reliability: 548.0) & (original description: Putative PRXQ, Description = Peroxiredoxin Q, chloroplastic, PFAM = PF00578)' T
'21.5' 'redox.peroxiredoxin' 'nbv0.5scaffold1656_403343-406029' '(at3g52960 : 240.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 210.0) no description available & (gnl|cdd|35761 : 197.0) no description available & (reliability: 480.0) & (original description: Putative PRDX5, Description = Peroxiredoxin 5, atypical 2-Cys peroxiredoxin, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101ctg12033_1-1429' '(at1g65980 : 140.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35761 : 116.0) no description available & (gnl|cdd|48562 : 103.0) no description available & (reliability: 280.0) & (original description: Putative PRXIIB, Description = Peroxiredoxin-2B, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf01520_829511-833973' '(at3g06050 : 288.0) Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.; peroxiredoxin IIF (PRXIIF); FUNCTIONS IN: peroxidase activity, antioxidant activity; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3925 Blast hits to 3925 proteins in 881 species: Archae - 6; Bacteria - 1549; Metazoa - 168; Fungi - 305; Plants - 221; Viruses - 0; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|35761 : 195.0) no description available & (gnl|cdd|48562 : 189.0) no description available & (reliability: 576.0) & (original description: Putative PRXIIF, Description = Peroxiredoxin-2F, mitochondrial, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf03671_213740-219964' '(at3g06050 : 286.0) Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.; peroxiredoxin IIF (PRXIIF); FUNCTIONS IN: peroxidase activity, antioxidant activity; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3925 Blast hits to 3925 proteins in 881 species: Archae - 6; Bacteria - 1549; Metazoa - 168; Fungi - 305; Plants - 221; Viruses - 0; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|35761 : 195.0) no description available & (gnl|cdd|48562 : 190.0) no description available & (reliability: 572.0) & (original description: Putative PRXIIF, Description = Peroxiredoxin-2F, mitochondrial, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf03711_244945-276755' '(at1g65980 : 277.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35761 : 225.0) no description available & (gnl|cdd|48562 : 207.0) no description available & (reliability: 554.0) & (original description: Putative PRXIIB, Description = Peroxiredoxin-2B, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf03991_81442-84116' '(at3g52960 : 241.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 212.0) no description available & (gnl|cdd|35761 : 202.0) no description available & (reliability: 482.0) & (original description: Putative PRXIIE, Description = Peroxiredoxin-2E, chloroplastic, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf05392_116082-118768' '(at3g52960 : 234.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 209.0) no description available & (gnl|cdd|35761 : 196.0) no description available & (reliability: 468.0) & (original description: Putative ahpC, Description = Peroxiredoxin, PFAM = PF08534)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf05682_77391-81094' '(at3g26060 : 270.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 206.0) no description available & (gnl|cdd|48566 : 181.0) no description available & (reliability: 540.0) & (original description: Putative bcp, Description = Putative thiol peroxidase, PFAM = PF00578)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf06739_189652-198365' '(at3g26060 : 269.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 206.0) no description available & (gnl|cdd|48566 : 176.0) no description available & (reliability: 538.0) & (original description: Putative prxQ, Description = Peroxiredoxin Q, thioredoxin dependent peroxidase chloroplast, PFAM = PF00578)' T
'21.5' 'redox.peroxiredoxin' 'niben101scf08562_52793-55470' '(at3g52960 : 241.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 211.0) no description available & (gnl|cdd|35761 : 200.0) no description available & (reliability: 482.0) & (original description: Putative prx5, Description = Peroxiredoxin, type II, PFAM = PF08534)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'nbv0.3scaffold9176_2211-10381' '(at5g06290 : 229.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 228.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|36070 : 182.0) no description available & (gnl|cdd|48564 : 173.0) no description available & (reliability: 458.0) & (original description: Putative ahpC, Description = Peroxiredoxin, PFAM = PF00578;PF10417)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'niben044scf00026425ctg017_330-7377' '(at5g06290 : 376.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 362.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 297.0) no description available & (gnl|cdd|36070 : 290.0) no description available & (reliability: 752.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'niben044scf00044024ctg001_3240-12494' '(at5g06290 : 377.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 365.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 295.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 754.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf01372_42186-49195' '(at5g06290 : 378.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 367.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 297.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 756.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF00578;PF10417)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf04717_340989-357579' '(at5g06290 : 388.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 380.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 298.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 776.0) & (original description: Putative bas1, Description = Thiol-specific antioxidant protein, PFAM = PF00578;PF10417)' T
'21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf08020_139881-148041' '(at5g06290 : 388.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 378.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 300.0) no description available & (gnl|cdd|36070 : 290.0) no description available & (reliability: 776.0) & (original description: Putative TSA, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T
'21.5.2' 'redox.peroxiredoxin.PER1' '' ''
'21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold3808_57750-70586' '(at5g23310 : 384.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36094 : 235.0) no description available & (p22302|sodf_nicpl : 234.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30950 : 209.0) no description available & (reliability: 768.0) & (original description: Putative FSD3, Description = Superoxide dismutase [Fe] 3, chloroplastic, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold67971_4237-9767' '(at1g12520 : 364.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 280.0) no description available & (reliability: 728.0) & (original description: Putative CCS, Description = Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, PFAM = PF00403;PF00080)' T
'21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold69813_2881-9344' '(p10792|sodcp_pethy : 291.0) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Petunia hybrida (Petunia) & (at2g28190 : 246.0) Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage.; copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|84499 : 232.0) no description available & (gnl|cdd|35662 : 195.0) no description available & (reliability: 492.0) & (original description: Putative SODCP, Description = Superoxide dismutase [Cu-Zn], chloroplastic, PFAM = PF00080)' T
'21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold93519_1-4867' '(p49315|cata1_nicpl : 939.0) Catalase isozyme 1 (EC 1.11.1.6) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 860.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 703.0) no description available & (gnl|cdd|35270 : 686.0) no description available & (reliability: 1720.0) & (original description: Putative CAT2, Description = Catalase isozyme 2, PFAM = PF00199;PF06628)' T
'21.6' 'redox.dismutases and catalases' 'niben044ctg26053601_1-2253' '(p27082|sodc_nicpl : 214.0) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g08830 : 184.0) Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress.; copper/zinc superoxide dismutase 1 (CSD1); CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 4705 Blast hits to 4689 proteins in 1491 species: Archae - 6; Bacteria - 2000; Metazoa - 1249; Fungi - 303; Plants - 666; Viruses - 142; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84499 : 177.0) no description available & (gnl|cdd|35662 : 153.0) no description available & (reliability: 368.0) & (original description: Putative sod, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T
'21.6' 'redox.dismutases and catalases' 'niben044scf00001673ctg013_30-5348' '(at1g12520 : 362.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 281.0) no description available & (reliability: 724.0) & (original description: Putative CCS, Description = Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, PFAM = PF00403;PF00080)' T
'21.6' 'redox.dismutases and catalases' 'niben044scf00008842ctg000_3136-17942' '(at5g23310 : 366.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22302|sodf_nicpl : 218.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|36094 : 218.0) no description available & (gnl|cdd|30950 : 193.0) no description available & (reliability: 732.0) & (original description: Putative FSD3, Description = Superoxide dismutase [Fe] 3, chloroplastic, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf00163_806548-810838' '(at5g51100 : 320.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (p22302|sodf_nicpl : 311.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|36094 : 244.0) no description available & (gnl|cdd|30950 : 240.0) no description available & (reliability: 640.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF02777;PF00081)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf00484_89016-93929' '(o49044|sodc2_mescr : 216.0) Superoxide dismutase [Cu-Zn] 2 (EC 1.15.1.1) - Mesembryanthemum crystallinum (Common ice plant) & (at5g18100 : 196.0) A putative peroxisomal CuZnSOD inducible by a high-light pulse.; copper/zinc superoxide dismutase 3 (CSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to oxidative stress, oxygen and reactive oxygen species metabolic process, removal of superoxide radicals; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84499 : 191.0) no description available & (gnl|cdd|35662 : 169.0) no description available & (reliability: 392.0) & (original description: Putative sod, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf00712_1547617-1555669' '(p49317|cata3_nicpl : 1005.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 942.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 745.0) no description available & (gnl|cdd|35270 : 736.0) no description available & (reliability: 1884.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF06628;PF00199)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf00860_372210-377010' '(p22302|sodf_nicpl : 401.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g51100 : 309.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (gnl|cdd|36094 : 249.0) no description available & (gnl|cdd|30950 : 248.0) no description available & (reliability: 618.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf01237_1307350-1313704' '(p11796|sodm_nicpl : 419.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 266.0) no description available & (gnl|cdd|30950 : 236.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf01497_282907-288923' '(p49315|cata1_nicpl : 1000.0) Catalase isozyme 1 (EC 1.11.1.6) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 923.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 735.0) no description available & (gnl|cdd|35270 : 725.0) no description available & (reliability: 1846.0) & (original description: Putative CAT2, Description = Catalase isozyme 2, PFAM = PF06628;PF00199)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf03631_56616-62166' '(p49317|cata3_nicpl : 997.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 937.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 746.0) no description available & (gnl|cdd|35270 : 739.0) no description available & (reliability: 1874.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF00199;PF06628)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf03679_369444-373914' '(p22302|sodf_nicpl : 377.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g51100 : 291.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (gnl|cdd|30950 : 258.0) no description available & (gnl|cdd|36094 : 256.0) no description available & (reliability: 582.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf03712_139250-151165' '(at5g23310 : 383.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36094 : 236.0) no description available & (p22302|sodf_nicpl : 234.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30950 : 210.0) no description available & (reliability: 766.0) & (original description: Putative fsd1, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf04926_413126-417674' '(at5g51100 : 313.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (p28759|sodf_soybn : 300.0) Superoxide dismutase [Fe], chloroplast precursor (EC 1.15.1.1) - Glycine max (Soybean) & (gnl|cdd|36094 : 252.0) no description available & (gnl|cdd|30950 : 245.0) no description available & (reliability: 626.0) & (original description: Putative FSD2, Description = Superoxide dismutase [Fe] 2, chloroplastic, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf05395_357785-365859' '(p49317|cata3_nicpl : 957.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 916.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 729.0) no description available & (gnl|cdd|35270 : 719.0) no description available & (reliability: 1832.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF06628;PF00199)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf06799_161338-165290' '(p10792|sodcp_pethy : 254.0) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Petunia hybrida (Petunia) & (at2g28190 : 231.0) Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage.; copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|84499 : 228.0) no description available & (gnl|cdd|35662 : 190.0) no description available & (reliability: 462.0) & (original description: Putative sod1, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf06912_200988-206079' '(at1g12520 : 346.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 273.0) no description available & (reliability: 692.0) & (original description: Putative CCS, Description = Putative copper chaperone for Cu/Zn superoxide dismutase, PFAM = PF00080;PF00403)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf09401_21343-25756' '(p11796|sodm_nicpl : 458.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 265.0) no description available & (gnl|cdd|30950 : 233.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF00081;PF02777)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf11604_133355-138885' '(at1g12520 : 358.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 278.0) no description available & (reliability: 716.0) & (original description: Putative ovg23, Description = Putative copper/zinc superoxide dismutase copper chaperone, PFAM = PF00080;PF00403)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf14996_44938-51204' '(p49319|cata1_tobac : 1034.0) Catalase isozyme 1 (EC 1.11.1.6) (Salicylic acid-binding protein) (SABP) - Nicotiana tabacum (Common tobacco) & (at4g35090 : 830.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 718.0) no description available & (gnl|cdd|35270 : 683.0) no description available & (reliability: 1660.0) & (original description: Putative cat, Description = Catalase, PFAM = PF00199;PF06628)' T
'21.6' 'redox.dismutases and catalases' 'niben101scf23113_145310-156417' '(p11796|sodm_nicpl : 425.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 267.0) no description available & (gnl|cdd|30950 : 239.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF02777;PF00081)' T
'21.99' 'redox.misc' 'nbv0.3scaffold408_124582-129445' '(at5g53560 : 218.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 191.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 134.0) no description available & (gnl|cdd|84581 : 109.0) no description available & (reliability: 436.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'nbv0.5scaffold1080_619118-624462' '(at5g17770 : 357.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 247.0) no description available & (p39869|nia_lotja : 164.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (gnl|cdd|85158 : 123.0) no description available & (reliability: 714.0) & (original description: Putative b5R, Description = NADH-cytochrome b5 reductase, PFAM = PF00175;PF00970)' T
'21.99' 'redox.misc' 'niben101scf00225_812657-817425' '(at5g53560 : 224.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 197.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 140.0) no description available & (gnl|cdd|84581 : 108.0) no description available & (reliability: 448.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf00542_310740-320941' '(at5g20080 : 447.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: cytochrome-b5 reductase activity, copper ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: NADH:cytochrome B5 reductase 1 (TAIR:AT5G17770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35754 : 282.0) no description available & (p39865|nia1_phavu : 147.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|30889 : 131.0) no description available & (reliability: 894.0) & (original description: Putative CBR2, Description = NADH-cytochrome b5 reductase-like protein, PFAM = PF00175;PF00970)' T
'21.99' 'redox.misc' 'niben101scf02427_428016-448042' '(gnl|cdd|35757 : 111.0) no description available & (at5g48810 : 103.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84581 : 98.0) no description available & (p49098|cyb5_tobac : 96.7) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (reliability: 186.4) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf03076_142531-146761' '(at1g31170 : 154.0) encodes a cysteine-sulfinic acid reductase (sulfiredoxin - EC 1.8.98.2) capable of reducing overoxidized plastidic 2-Cys-Prx involved in peroxide detoxification and response to oxidative stress; sulfiredoxin (SRX); CONTAINS InterPro DOMAIN/s: ParB-like nuclease (InterPro:IPR003115). & (gnl|cdd|38598 : 125.0) no description available & (reliability: 308.0) & (original description: Putative SRX, Description = Sulfiredoxin, chloroplastic/mitochondrial, PFAM = PF02195)' T
'21.99' 'redox.misc' 'niben101scf03488_929737-935650' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 124.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 107.0) no description available & (gnl|cdd|84581 : 96.5) no description available & (reliability: 238.0) & (original description: Putative At2g32720, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf03634_38724-47541' '(at5g17770 : 461.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 318.0) no description available & (p39869|nia_lotja : 197.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (gnl|cdd|30889 : 134.0) no description available & (reliability: 922.0) & (original description: Putative CBR1, Description = NADH--cytochrome b5 reductase 1, PFAM = PF00970;PF00175)' T
'21.99' 'redox.misc' 'niben101scf04639_1666450-1681406' '(at5g20080 : 446.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: cytochrome-b5 reductase activity, copper ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: NADH:cytochrome B5 reductase 1 (TAIR:AT5G17770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35754 : 281.0) no description available & (p39866|nia2_phavu : 146.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|30889 : 130.0) no description available & (reliability: 892.0) & (original description: Putative CBR2, Description = NADH-cytochrome b5 reductase-like protein, PFAM = PF00970;PF00175)' T
'21.99' 'redox.misc' 'niben101scf04995_1776168-1782529' '(gnl|cdd|35757 : 107.0) no description available & (at5g48810 : 101.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 96.3) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 94.5) no description available & (reliability: 200.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf05886_264629-273599' '(at2g32720 : 144.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 141.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 137.0) no description available & (gnl|cdd|84581 : 110.0) no description available & (reliability: 276.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf07842_132349-137639' '(at5g53560 : 224.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 197.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 139.0) no description available & (gnl|cdd|84581 : 108.0) no description available & (reliability: 448.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf09620_429389-438179' '(gnl|cdd|35757 : 133.0) no description available & (at2g32720 : 128.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 125.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|84581 : 109.0) no description available & (reliability: 250.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf13141_84557-89380' '(at5g53560 : 209.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49100|cyb5_orysa : 183.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 124.0) no description available & (gnl|cdd|84581 : 96.8) no description available & (reliability: 418.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf13254_21705-28168' '(at5g17770 : 473.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 315.0) no description available & (p16081|nia1_orysa : 199.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (gnl|cdd|30889 : 134.0) no description available & (reliability: 946.0) & (original description: Putative CBR1, Description = NADH--cytochrome b5 reductase 1, PFAM = PF00970;PF00175)' T
'21.99' 'redox.misc' 'niben101scf14308_2313-5822' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 122.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 108.0) no description available & (gnl|cdd|84581 : 98.4) no description available & (reliability: 238.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T
'21.99' 'redox.misc' 'niben101scf34323_48315-56181' '(at5g51880 : 301.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47971 : 92.8) no description available & (reliability: 602.0) & (original description: Putative BnaCnng67150D, Description = BnaCnng67150D protein, PFAM = )' T
'21.1001' 'redox' 'threonate' 'redox regulation; ascorbate metabolism; precursor' M
'21.1002' 'redox' 'glucarate' 'redox regulation; ascorbate metabolism; precursor' M
'21.1003' 'redox' 'gulonate-gamma-lactone' 'redox regulation; ascorbate metabolism; precursor' M
'21.1004' 'redox' 'glucuronate' 'redox regulation; ascorbate metabolism; precursor' M
'21.1005' 'redox' 'mannose-6-p' 'redox regulation; ascorbate metabolism; precursor' M
'21.1006' 'redox' 'mannose-1-p' 'redox regulation; ascorbate metabolism; precursor' M
'21.1007' 'redox' 'galactonate-gamma-lactone' 'redox regulation; ascorbate metabolism; precursor' M
'21.1008' 'redox' 'ascorbate' 'hormone metabolism.ethylene; stress; redox regulation' M
'21.1009' 'redox' 'dehydroascorbate' 'stress; redox regulation' M
'21.1010' 'redox' 'pyroglutamate' 'redox regulation, glutathion metabolism, degradation product. Also analyte' M
'21.1011' 'redox' 'gulonate' '' M
'22' 'polyamine metabolism' '' ''
'22.1' 'polyamine metabolism.synthesis' '' ''
'22.1.1' 'polyamine metabolism.synthesis.ornithine decarboxylase' '' ''
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00058_659467-662483' '(at5g18930 : 398.0) BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36007 : 315.0) no description available & (gnl|cdd|85518 : 287.0) no description available & (q9axe3|dcam_dauca : 247.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Daucus carota (Carrot) & (reliability: 796.0) & (original description: Putative SAMDC4, Description = S-adenosylmethionine decarboxylase proenzyme 4, PFAM = PF01536)' T
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00390_81392-97957' '(q96471|dcam_iponi : 251.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (gnl|cdd|85518 : 223.0) no description available & (at3g25570 : 214.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 198.0) no description available & (reliability: 428.0) & (original description: Putative samdc, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00390_95292-98437' '(q96471|dcam_iponi : 503.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (gnl|cdd|85518 : 439.0) no description available & (at3g02470 : 421.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36007 : 380.0) no description available & (reliability: 842.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf02080_342437-345519' '(o80402|dcam_nicsy : 673.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|85518 : 492.0) no description available & (at3g25570 : 448.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 410.0) no description available & (reliability: 896.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf04126_515528-519077' '(o80402|dcam_nicsy : 617.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|85518 : 466.0) no description available & (at3g25570 : 462.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 384.0) no description available & (reliability: 924.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536;PF08132)' T
'22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf09150_372542-375549' '(at5g18930 : 400.0) BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36007 : 324.0) no description available & (gnl|cdd|85518 : 297.0) no description available & (q04694|dcam_soltu : 256.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Solanum tuberos & (reliability: 800.0) & (original description: Putative SAMDC4, Description = S-adenosylmethionine decarboxylase proenzyme 4, PFAM = PF01536)' T
'22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'nbv0.3scaffold25132_18238-22433' '(q43075|spe1_pea : 969.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at2g16500 : 942.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements.; arginine decarboxylase 1 (ADC1); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 2 (TAIR:AT4G34710.2); Has 7460 Blast hits to 7389 proteins in 2069 species: Archae - 108; Bacteria - 5016; Metazoa - 91; Fungi - 35; Plants - 637; Viruses - 2; Other Eukaryotes - 1571 (source: NCBI BLink). & (gnl|cdd|81543 : 675.0) no description available & (reliability: 1884.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T
'22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'niben101scf00466_323752-327914' '(q43075|spe1_pea : 971.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at4g34710 : 930.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.; arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81543 : 677.0) no description available & (reliability: 1860.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T
'22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'niben101scf01025_204434-208629' '(q43075|spe1_pea : 942.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at4g34710 : 928.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.; arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81543 : 677.0) no description available & (reliability: 1856.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T
'22.1.4' 'polyamine metabolism.synthesis.agmatine deiminase' 'niben101scf02632_396852-410242' '(at5g08170 : 592.0) EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|86635 : 460.0) no description available & (reliability: 1184.0) & (original description: Putative aguA, Description = Putative agmatine deiminase, PFAM = PF04371)' T
'22.1.4' 'polyamine metabolism.synthesis.agmatine deiminase' 'niben101scf05827_31981-40213' '(at5g08170 : 595.0) EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|86635 : 453.0) no description available & (reliability: 1190.0) & (original description: Putative AIH, Description = Agmatine deiminase, PFAM = PF04371)' T
'22.1.5' 'polyamine metabolism.synthesis.N-carbamoylputrescine amidohydrolase' 'nbv0.5scaffold3284_62186-103321' '(q3hvn1|agub_soltu : 595.0) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (at2g27450 : 550.0) Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.; nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 11784 Blast hits to 11734 proteins in 2281 species: Archae - 221; Bacteria - 8133; Metazoa - 478; Fungi - 416; Plants - 310; Viruses - 11; Other Eukaryotes - 2215 (source: NCBI BLink). & (gnl|cdd|36024 : 212.0) no description available & (gnl|cdd|30737 : 211.0) no description available & (reliability: 1100.0) & (original description: Putative CPA, Description = N-carbamoylputrescine amidase, PFAM = PF00795)' T
'22.1.5' 'polyamine metabolism.synthesis.N-carbamoylputrescine amidohydrolase' 'niben101scf00538_584594-616204' '(q3hvn1|agub_soltu : 593.0) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (at2g27450 : 550.0) Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.; nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 11784 Blast hits to 11734 proteins in 2281 species: Archae - 221; Bacteria - 8133; Metazoa - 478; Fungi - 416; Plants - 310; Viruses - 11; Other Eukaryotes - 2215 (source: NCBI BLink). & (gnl|cdd|30737 : 211.0) no description available & (gnl|cdd|36024 : 210.0) no description available & (reliability: 1100.0) & (original description: Putative CPA, Description = N-carbamoylputrescine amidase, PFAM = PF00795)' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'nbv0.5scaffold568_6416-143752' '(o48660|spde_nicsy : 518.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 488.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 406.0) no description available & (gnl|cdd|85532 : 317.0) no description available & (reliability: 976.0) & (original description: Putative pmt, Description = Spermidine synthase, PFAM = PF17284;PF01564)' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf00154_122583-127961' '(o48660|spde_nicsy : 608.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 519.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 425.0) no description available & (gnl|cdd|85532 : 339.0) no description available & (reliability: 1038.0) & (original description: Putative SPDSYN, Description = Spermidine synthase, PFAM = PF01564;PF17284)' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf03534_296330-302310' '(o48660|spde_nicsy : 629.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g70310 : 520.0) Spermidine synthase.; spermidine synthase 2 (SPDS2); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 5357 Blast hits to 5354 proteins in 1531 species: Archae - 177; Bacteria - 2946; Metazoa - 372; Fungi - 210; Plants - 425; Viruses - 0; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|36775 : 430.0) no description available & (gnl|cdd|85532 : 339.0) no description available & (reliability: 1040.0) & (original description: Putative SPDSYN, Description = Spermidine synthase, PFAM = PF01564;PF17284)' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf05697_1168587-1172003' '(at5g04610 : 251.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: shoot apex, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G31740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37563 : 178.0) no description available & (reliability: 502.0) & (original description: Putative At5g04610, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, PFAM = )' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf06783_1372-14527' '(q9seh4|pmt4_tobac : 700.0) Putrescine N-methyltransferase 4 (EC 2.1.1.53) (PMT 4) - Nicotiana tabacum (Common tobacco) & (at1g23820 : 401.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 361.0) no description available & (gnl|cdd|85532 : 323.0) no description available & (reliability: 802.0) & (original description: Putative PMT1, Description = Putrescine N-methyltransferase 1, PFAM = PF01564;PF17284)' T
'22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf08226_6482-15883' '(o48660|spde_nicsy : 560.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 516.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 425.0) no description available & (gnl|cdd|85532 : 334.0) no description available & (reliability: 1032.0) & (original description: Putative pmt, Description = Spermidine synthase, PFAM = PF17284;PF01564)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'nbv0.3scaffold41753_2974-13305' '(at5g53120 : 561.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 422.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 412.0) no description available & (gnl|cdd|85532 : 307.0) no description available & (reliability: 1122.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF17284;PF01564)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben044scf00027175ctg009_1-6560' '(at5g53120 : 532.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 401.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 395.0) no description available & (gnl|cdd|85532 : 307.0) no description available & (reliability: 1064.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF01564;PF17284)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben044scf00030855ctg004_8973-12848' '(at5g19530 : 378.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 161.0) no description available & (gnl|cdd|36775 : 91.9) no description available & (q9ztr1|spd1_pea : 88.2) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (reliability: 756.0) & (original description: Putative ac15a, Description = Thermospermine synthase, PFAM = PF01564)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf01506_326839-331920' '(at5g19530 : 460.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 254.0) no description available & (q9ztr1|spd1_pea : 137.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (gnl|cdd|36775 : 131.0) no description available & (reliability: 920.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf02290_176519-184758' '(at5g53120 : 558.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 415.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 413.0) no description available & (gnl|cdd|85532 : 306.0) no description available & (reliability: 1116.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF01564;PF17284)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf02425_1-13504' '(at5g19530 : 406.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 238.0) no description available & (q9ztr1|spd1_pea : 130.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (gnl|cdd|36775 : 127.0) no description available & (reliability: 812.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T
'22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf11108_1539-8336' '(at5g19530 : 512.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 255.0) no description available & (gnl|cdd|36775 : 145.0) no description available & (q9ztr1|spd1_pea : 138.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (reliability: 1024.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T
'22.2' 'polyamine metabolism.degradation' '' ''
'22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'nbv0.3scaffold87376_1-5692' '(at5g13700 : 368.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 162.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 104.0) no description available & (reliability: 736.0) & (original description: Putative PAO, Description = Polyamine oxidase 1, PFAM = PF01593)' T
'22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'niben044scf00023215ctg000_164-5863' '(at5g13700 : 476.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 271.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 204.0) no description available & (gnl|cdd|85554 : 140.0) no description available & (reliability: 952.0) & (original description: Putative pao1, Description = Polyamine oxidase, PFAM = PF01593;PF01593)' T
'22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'niben101scf01986_347755-356151' '(at5g13700 : 613.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 345.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 237.0) no description available & (gnl|cdd|85554 : 111.0) no description available & (reliability: 1226.0) & (original description: Putative PAO1, Description = Polyamine oxidase 1, PFAM = PF01593;PF01593)' T
'22.1001' 'polyamine metabolism' 'gaba' 'amino acid degradation.glutamate; polyamine metabolism' M
'22.1002' 'polyamine metabolism' 'agmatine' 'polyamine metabolism' M
'22.1003' 'polyamine metabolism' 'putrescine' 'amino acid degradation.arginine; polyamine metabolism' M
'22.1004' 'polyamine metabolism' 'spermidine' 'polyamine metabolism' M
'22.1005' 'polyamine metabolism' 'spermine' 'polyamine metabolism' M
'23' 'nucleotide metabolism' 'nbv0.3scaffold31139_1-5207' '(at4g16566 : 150.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 110.0) no description available & (reliability: 300.0) & (original description: Putative BnaC01g19770D, Description = BnaC01g19770D protein, PFAM = PF11969)' T
'23' 'nucleotide metabolism' 'niben101scf01051_430415-435506' '(at4g16566 : 199.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 110.0) no description available & (gnl|cdd|39560 : 85.5) no description available & (reliability: 398.0) & (original description: Putative HINT4, Description = Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4, PFAM = PF11969)' T
'23' 'nucleotide metabolism' 'niben101scf03374_31719-37256' '(at4g16566 : 188.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 108.0) no description available & (gnl|cdd|39560 : 82.8) no description available & (reliability: 376.0) & (original description: Putative HINT4, Description = Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4, PFAM = PF11969)' T
'23.1' 'nucleotide metabolism.synthesis' '' ''
'23.1.1' 'nucleotide metabolism.synthesis.pyrimidine' '' ''
'23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'nbv0.5scaffold2706_6132-12906' '(at1g29900 : 1935.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|81506 : 1769.0) no description available & (gnl|cdd|35591 : 902.0) no description available & (reliability: 3870.0) & (original description: Putative carB, Description = Carbamoyl-phosphate synthase (glutamine-hydrolyzing), PFAM = PF02142;PF02786;PF02786;PF02787)' T
'23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf00482_999400-1002825' '(gnl|cdd|81506 : 723.0) no description available & (at1g29900 : 660.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|35591 : 365.0) no description available & (reliability: 1320.0) & (original description: Putative carB, Description = Carbamoyl-phosphate synthase (glutamine-hydrolyzing), PFAM = PF02786)' T
'23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf05372_608167-615104' '(at1g29900 : 1935.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|81506 : 1770.0) no description available & (gnl|cdd|35591 : 905.0) no description available & (reliability: 3870.0) & (original description: Putative CARB, Description = Carbamoyl-phosphate synthase large chain, chloroplastic, PFAM = PF02786;PF02786;PF02787;PF02142)' T
'23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf05449_10594-16275' '(at3g27740 : 668.0) carbamoyl phosphate synthetase small subunit mRNA (carA),; carbamoyl phosphate synthetase A (CARA); FUNCTIONS IN: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, catalytic activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Carbamoyl phosphate synthase, small subunit, N-terminal (InterPro:IPR002474), Glutamine amidotransferase type 1 (InterPro:IPR017926), Carbamoyl phosphate synthase, small subunit (InterPro:IPR006274), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 28262 Blast hits to 23423 proteins in 4115 species: Archae - 591; Bacteria - 17320; Metazoa - 1741; Fungi - 716; Plants - 245; Viruses - 0; Other Eukaryotes - 7649 (source: NCBI BLink). & (gnl|cdd|84188 : 545.0) no description available & (gnl|cdd|35591 : 432.0) no description available & (reliability: 1336.0) & (original description: Putative CARA, Description = Carbamoyl-phosphate synthase small chain, chloroplastic, PFAM = PF00117;PF00988)' T
'23.1.1.2' 'nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase' 'niben101scf00800_93818-98272' '(q43087|pyrb2_pea : 546.0) Aspartate carbamoyltransferase 2, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) - Pisum sativum (Garden pea) & (at3g20330 : 535.0) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis; PYRIMIDINE B (PYRB); FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate carbamoyltransferase, eukaryotic (InterPro:IPR002082), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131); BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase (TAIR:AT1G75330.1); Has 16843 Blast hits to 16841 proteins in 2894 species: Archae - 534; Bacteria - 10902; Metazoa - 218; Fungi - 284; Plants - 116; Viruses - 6; Other Eukaryotes - 4783 (source: NCBI BLink). & (gnl|cdd|30886 : 342.0) no description available & (gnl|cdd|35591 : 320.0) no description available & (reliability: 1070.0) & (original description: Putative PYRB1, Description = Aspartate carbamoyltransferase 1, chloroplastic, PFAM = PF00185;PF02729)' T
'23.1.1.2' 'nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase' 'niben101scf15752_120987-125409' '(q43087|pyrb2_pea : 544.0) Aspartate carbamoyltransferase 2, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) - Pisum sativum (Garden pea) & (at3g20330 : 538.0) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis; PYRIMIDINE B (PYRB); FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate carbamoyltransferase, eukaryotic (InterPro:IPR002082), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131); BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase (TAIR:AT1G75330.1); Has 16843 Blast hits to 16841 proteins in 2894 species: Archae - 534; Bacteria - 10902; Metazoa - 218; Fungi - 284; Plants - 116; Viruses - 6; Other Eukaryotes - 4783 (source: NCBI BLink). & (gnl|cdd|30886 : 344.0) no description available & (gnl|cdd|35591 : 322.0) no description available & (reliability: 1076.0) & (original description: Putative PYRB, Description = Aspartate carbamoyltransferase, chloroplastic, PFAM = PF00185;PF02729)' T
'23.1.1.3' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotase' 'niben044scf00029884ctg000_1-4919' '(gnl|cdd|81600 : 373.0) no description available & (at4g22930 : 362.0) Encodes dihydroorotase (PYR4).; pyrimidin 4 (PYR4); FUNCTIONS IN: dihydroorotase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine base biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotase, conserved site (InterPro:IPR002195), Dihydroorotase homodimeric type (InterPro:IPR004721), Amidohydrolase 1 (InterPro:IPR006680); Has 3373 Blast hits to 3371 proteins in 1108 species: Archae - 32; Bacteria - 2225; Metazoa - 2; Fungi - 146; Plants - 54; Viruses - 0; Other Eukaryotes - 914 (source: NCBI BLink). & (gnl|cdd|38113 : 273.0) no description available & (reliability: 724.0) & (original description: Putative pyrC, Description = DHOase, PFAM = PF01979)' T
'23.1.1.3' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotase' 'niben101scf05948_663504-683689' '(gnl|cdd|81600 : 582.0) no description available & (at4g22930 : 577.0) Encodes dihydroorotase (PYR4).; pyrimidin 4 (PYR4); FUNCTIONS IN: dihydroorotase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine base biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotase, conserved site (InterPro:IPR002195), Dihydroorotase homodimeric type (InterPro:IPR004721), Amidohydrolase 1 (InterPro:IPR006680); Has 3373 Blast hits to 3371 proteins in 1108 species: Archae - 32; Bacteria - 2225; Metazoa - 2; Fungi - 146; Plants - 54; Viruses - 0; Other Eukaryotes - 914 (source: NCBI BLink). & (gnl|cdd|38113 : 438.0) no description available & (reliability: 1154.0) & (original description: Putative PYR4, Description = Dihydroorotase, mitochondrial, PFAM = PF01979)' T
'23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'nbv0.5scaffold1593_89251-110856' '(at5g23300 : 617.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 516.0) no description available & (gnl|cdd|73400 : 446.0) no description available & (reliability: 1234.0) & (original description: Putative PYRD, Description = Dihydroorotate dehydrogenase (quinone), mitochondrial, PFAM = PF01180)' T
'23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'niben101scf04077_573004-591709' '(at5g23300 : 620.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 517.0) no description available & (gnl|cdd|73400 : 450.0) no description available & (reliability: 1240.0) & (original description: Putative PYRD, Description = Dihydroorotate dehydrogenase (quinone), mitochondrial, PFAM = PF01180)' T
'23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'niben101scf06829_358139-362159' '(at5g23300 : 189.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 159.0) no description available & (gnl|cdd|73400 : 144.0) no description available & (reliability: 378.0) & (original description: Putative pyrD, Description = DHOdehase, PFAM = PF01180)' T
'23.1.1.5' 'nucleotide metabolism.synthesis.pyrimidine.orotate phosphoribosyltransferase' 'niben101scf05747_112434-125464' '(q42942|pyr5_tobac : 860.0) Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRTase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54470 : 711.0) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis; uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); FUNCTIONS IN: orotate phosphoribosyltransferase activity, orotidine-5'-phosphate decarboxylase activity; INVOLVED IN: response to cadmium ion, cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Orotidine 5'-phosphate decarboxylase, subfamily 1, core (InterPro:IPR014732), Orotidine 5'-phosphate decarboxylase, active site (InterPro:IPR018089), Ribulose-phosphate binding barrel (InterPro:IPR011060), Phosphoribosyltransferase (InterPro:IPR000836), Orotate phosphoribosyl transferase (InterPro:IPR004467), Orotidine 5'-phosphate decarboxylase, core (InterPro:IPR001754); Has 9174 Blast hits to 9124 proteins in 2964 species: Archae - 386; Bacteria - 5538; Metazoa - 208; Fungi - 955; Plants - 89; Viruses - 3; Other Eukaryotes - 1995 (source: NCBI BLink). & (gnl|cdd|36591 : 262.0) no description available & (gnl|cdd|84617 : 188.0) no description available & (reliability: 1422.0) & (original description: Putative pyr, Description = Uridine 5'-monophosphate synthase, PFAM = PF00156;PF00215)' T
'23.1.1.6' 'nucleotide metabolism.synthesis.pyrimidine.orotidine-5'-phosphate decarboxylase' '' ''
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.3scaffold34693_7336-15856' '(gnl|cdd|37598 : 1000.0) no description available & (at1g30820 : 929.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 791.0) no description available & (reliability: 1858.0) & (original description: Putative URA7, Description = CTP synthase 1, PFAM = PF00117;PF06418)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.3scaffold35601_1-7665' '(gnl|cdd|37598 : 950.0) no description available & (at1g30820 : 857.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 763.0) no description available & (reliability: 1714.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF06418;PF00117)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.5scaffold621_555289-564676' '(gnl|cdd|37598 : 817.0) no description available & (at4g02120 : 752.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|81555 : 680.0) no description available & (reliability: 1504.0) & (original description: Putative ctps, Description = CTP synthase, PFAM = PF00117;PF06418;PF06418)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf01623_1111803-1126370' '(gnl|cdd|37598 : 935.0) no description available & (at4g02120 : 870.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|81555 : 771.0) no description available & (reliability: 1740.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf09444_107065-118708' '(at4g02120 : 439.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|37598 : 435.0) no description available & (gnl|cdd|28858 : 348.0) no description available & (reliability: 878.0) & (original description: Putative ctps, Description = CTP synthase, PFAM = PF06418;PF00117)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf09708_593954-602463' '(gnl|cdd|37598 : 995.0) no description available & (at1g30820 : 902.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 800.0) no description available & (reliability: 1804.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T
'23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf10122_184664-193304' '(gnl|cdd|37598 : 1006.0) no description available & (at1g30820 : 935.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 790.0) no description available & (reliability: 1870.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T
'23.1.1.1001' 'nucleotide metabolism.synthesis.pyrimidines' 'adenine' '' M
'23.1.1.1002' 'nucleotide metabolism.synthesis.pyrimidines' 'adenosine' '' M
'23.1.1.1003' 'nucleotide metabolism.synthesis.pyrimidines' 'amp' '' M
'23.1.1.1004' 'nucleotide metabolism.synthesis.pyrimidines' 'adp' '' M
'23.1.1.1005' 'nucleotide metabolism.synthesis.pyrimidines' 'atp' '' M
'23.1.1.1006' 'nucleotide metabolism.synthesis.pyrimidines' 'cytidine' '' M
'23.1.1.1007' 'nucleotide metabolism.synthesis.pyrimidines' 'cmp' '' M
'23.1.1.1008' 'nucleotide metabolism.synthesis.pyrimidines' 'cdp' '' M
'23.1.1.1009' 'nucleotide metabolism.synthesis.pyrimidines' 'ctp' '' M
'23.1.1.1010' 'nucleotide metabolism.synthesis.pyrimidines' 'dctp' '' M
'23.1.1.1011' 'nucleotide metabolism.synthesis.pyrimidines' 'thymidine' '' M
'23.1.2' 'nucleotide metabolism.synthesis.purine' '' ''
'23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben044scf00059617ctg000_13440-17060' '(p52418|pur1_soybn : 759.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (at2g16570 : 751.0) Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis; GLN phosphoribosyl pyrophosphate amidotransferase 1 (ASE1); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21477 Blast hits to 21465 proteins in 2911 species: Archae - 627; Bacteria - 12302; Metazoa - 410; Fungi - 379; Plants - 300; Viruses - 17; Other Eukaryotes - 7442 (source: NCBI BLink). & (gnl|cdd|35792 : 647.0) no description available & (gnl|cdd|30383 : 604.0) no description available & (reliability: 1502.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T
'23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf01852_443578-448560' '(p52418|pur1_soybn : 773.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (at2g16570 : 763.0) Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis; GLN phosphoribosyl pyrophosphate amidotransferase 1 (ASE1); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21477 Blast hits to 21465 proteins in 2911 species: Archae - 627; Bacteria - 12302; Metazoa - 410; Fungi - 379; Plants - 300; Viruses - 17; Other Eukaryotes - 7442 (source: NCBI BLink). & (gnl|cdd|35792 : 659.0) no description available & (gnl|cdd|30383 : 615.0) no description available & (reliability: 1526.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T
'23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf10919_206653-210294' '(at4g34740 : 850.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 807.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (gnl|cdd|35792 : 683.0) no description available & (gnl|cdd|30383 : 626.0) no description available & (reliability: 1700.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T
'23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf39208_23014-26851' '(at4g34740 : 852.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 809.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (gnl|cdd|35792 : 685.0) no description available & (gnl|cdd|30383 : 624.0) no description available & (reliability: 1704.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T
'23.1.2.2' 'nucleotide metabolism.synthesis.purine.GAR Synthetase' 'niben101scf04787_53244-59328' '(at1g09830 : 724.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (gnl|cdd|80769 : 639.0) no description available & (gnl|cdd|35458 : 578.0) no description available & (p52421|pur2_vigun : 497.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1448.0) & (original description: Putative PUR2, Description = Phosphoribosylamine--glycine ligase, chloroplastic, PFAM = PF02843;PF01071;PF02844)' T
'23.1.2.2' 'nucleotide metabolism.synthesis.purine.GAR Synthetase' 'niben101scf18725_13071-18416' '(at1g09830 : 721.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (gnl|cdd|80769 : 623.0) no description available & (gnl|cdd|35458 : 574.0) no description available & (p52421|pur2_vigun : 492.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1442.0) & (original description: Putative purD, Description = Phosphoribosylamine--glycine ligase, PFAM = PF02843;PF01071;PF02844)' T
'23.1.2.3' 'nucleotide metabolism.synthesis.purine.GAR transformylase' 'nbv0.3scaffold48686_12003-23695' '(p52423|pur3_vigun : 357.0) Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) - Vigna unguiculata (Cowpea) & (at1g31220 : 320.0) N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide; Formyl transferase; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, phosphoribosylglycinamide formyltransferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Phosphoribosylglycinamide formyltransferase (InterPro:IPR004607), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 13846 Blast hits to 13846 proteins in 2648 species: Archae - 117; Bacteria - 9929; Metazoa - 318; Fungi - 202; Plants - 129; Viruses - 3; Other Eukaryotes - 3148 (source: NCBI BLink). & (gnl|cdd|30647 : 210.0) no description available & (gnl|cdd|38286 : 200.0) no description available & (reliability: 640.0) & (original description: Putative purN, Description = Phosphoribosylglycinamide formyltransferase, PFAM = PF00551)' T
'23.1.2.3' 'nucleotide metabolism.synthesis.purine.GAR transformylase' 'niben101scf03209_92603-102396' '(p52423|pur3_vigun : 356.0) Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) - Vigna unguiculata (Cowpea) & (at1g31220 : 322.0) N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide; Formyl transferase; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, phosphoribosylglycinamide formyltransferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Phosphoribosylglycinamide formyltransferase (InterPro:IPR004607), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 13846 Blast hits to 13846 proteins in 2648 species: Archae - 117; Bacteria - 9929; Metazoa - 318; Fungi - 202; Plants - 129; Viruses - 3; Other Eukaryotes - 3148 (source: NCBI BLink). & (gnl|cdd|30647 : 204.0) no description available & (gnl|cdd|38286 : 201.0) no description available & (reliability: 644.0) & (original description: Putative purN, Description = Phosphoribosylglycinamide formyltransferase, PFAM = PF00551)' T
'23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'nbv0.3scaffold64734_9619-14588' '(at1g74260 : 1798.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 1566.0) no description available & (gnl|cdd|81507 : 1220.0) no description available & (reliability: 3596.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = PF02769;PF02769;PF13507)' T
'23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'nbv0.5scaffold1073_521857-528930' '(at1g74260 : 2233.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 1828.0) no description available & (gnl|cdd|81507 : 1415.0) no description available & (reliability: 4466.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = PF02769;PF02769;PF13507)' T
'23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'niben101scf02513_340988-342384' '(at1g74260 : 165.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 151.0) no description available & (gnl|cdd|81507 : 106.0) no description available & (reliability: 330.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = )' T
'23.1.2.5' 'nucleotide metabolism.synthesis.purine.AIR synthase' 'nbv0.3scaffold5287_24674-30275' '(at3g55010 : 516.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 506.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (gnl|cdd|81557 : 484.0) no description available & (gnl|cdd|35458 : 475.0) no description available & (reliability: 1032.0) & (original description: Putative PUR5, Description = Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial, PFAM = PF00586;PF02769)' T
'23.1.2.5' 'nucleotide metabolism.synthesis.purine.AIR synthase' 'niben101scf05029_52113-57674' '(at3g55010 : 520.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 504.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (gnl|cdd|81557 : 488.0) no description available & (gnl|cdd|35458 : 480.0) no description available & (reliability: 1040.0) & (original description: Putative PUR5, Description = Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic, PFAM = PF00586;PF02769)' T
'23.1.2.6' 'nucleotide metabolism.synthesis.purine.AIR carboxylase' 'niben101scf04738_477841-487611' '(at2g37690 : 829.0) phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative; FUNCTIONS IN: phosphoribosylaminoimidazole carboxylase activity, catalytic activity, ATP binding; INVOLVED IN: 'de novo' IMP biosynthetic process, pollen development; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosylaminoimidazole carboxylase (InterPro:IPR016301), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (InterPro:IPR003135), Phosphoribosylaminoimidazole carboxylase, ATPase subunit (InterPro:IPR005875), 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (InterPro:IPR000031), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein (TAIR:AT2G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30376 : 406.0) no description available & (gnl|cdd|38046 : 340.0) no description available & (reliability: 1658.0) & (original description: Putative PURKE, Description = Phosphoribosylaminoimidazole carboxylase, chloroplastic, PFAM = PF00731;PF02222)' T
'23.1.2.7' 'nucleotide metabolism.synthesis.purine.SAICAR synthetase' 'niben101scf04981_17946-46363' '(at3g21110 : 570.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|79072 : 345.0) no description available & (gnl|cdd|38046 : 188.0) no description available & (reliability: 1140.0) & (original description: Putative PUR7, Description = Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic, PFAM = PF01259)' T
'23.1.2.7' 'nucleotide metabolism.synthesis.purine.SAICAR synthetase' 'niben101scf05596_19667-26854' '(at3g21110 : 555.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|79072 : 337.0) no description available & (gnl|cdd|38046 : 186.0) no description available & (reliability: 1110.0) & (original description: Putative purC, Description = Phosphoribosylaminoimidazole-succinocarboxamide synthase, PFAM = PF01259)' T
'23.1.2.8' 'nucleotide metabolism.synthesis.purine.SAICAR lyase' 'niben101scf01409_1339527-1347317' '(gnl|cdd|82914 : 789.0) no description available & (at1g36280 : 713.0) L-Aspartase-like family protein; FUNCTIONS IN: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, IMP biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: L-Aspartase-like (InterPro:IPR008948), Adenylosuccinate lyase C-terminal/plant (InterPro:IPR013539), Adenylosuccinate lyase (InterPro:IPR004769), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: L-Aspartase-like family protein (TAIR:AT4G18440.1). & (gnl|cdd|37911 : 330.0) no description available & (reliability: 1426.0) & (original description: Putative purB, Description = Adenylosuccinate lyase, PFAM = PF08328;PF00206)' T
'23.1.2.8' 'nucleotide metabolism.synthesis.purine.SAICAR lyase' 'niben101scf11123_127654-134930' '(gnl|cdd|82914 : 787.0) no description available & (at1g36280 : 716.0) L-Aspartase-like family protein; FUNCTIONS IN: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, IMP biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: L-Aspartase-like (InterPro:IPR008948), Adenylosuccinate lyase C-terminal/plant (InterPro:IPR013539), Adenylosuccinate lyase (InterPro:IPR004769), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: L-Aspartase-like family protein (TAIR:AT4G18440.1). & (gnl|cdd|37911 : 330.0) no description available & (reliability: 1432.0) & (original description: Putative purB, Description = Adenylosuccinate lyase, PFAM = PF08328;PF00206)' T
'23.1.2.9' 'nucleotide metabolism.synthesis.purine.AICAR transformylase' 'nbv0.5scaffold3009_198925-209723' '(at2g35040 : 957.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (gnl|cdd|80768 : 665.0) no description available & (gnl|cdd|37766 : 514.0) no description available & (reliability: 1914.0) & (original description: Putative purH, Description = Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, PFAM = PF02142;PF01808)' T
'23.1.2.9' 'nucleotide metabolism.synthesis.purine.AICAR transformylase' 'niben101scf01739_360413-369648' '(at2g35040 : 958.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (gnl|cdd|80768 : 667.0) no description available & (gnl|cdd|37766 : 514.0) no description available & (reliability: 1916.0) & (original description: Putative purH, Description = Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, PFAM = PF01808;PF02142)' T
'23.1.2.10' 'nucleotide metabolism.synthesis.purine.IMP synthase' '' ''
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'nbv0.3scaffold48692_2802-7732' '(at3g57610 : 802.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 741.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 625.0) no description available & (gnl|cdd|84969 : 613.0) no description available & (reliability: 1604.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709)' T
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'nbv0.5scaffold611_603066-607641' '(at3g57610 : 518.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 482.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 392.0) no description available & (gnl|cdd|84969 : 377.0) no description available & (reliability: 1036.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709)' T
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben044scf00012047ctg009_1-3665' '(at3g57610 : 733.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 678.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 576.0) no description available & (gnl|cdd|84969 : 564.0) no description available & (reliability: 1466.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709;PF00709)' T
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf00735_273224-278925' '(at3g57610 : 810.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 743.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 624.0) no description available & (gnl|cdd|84969 : 610.0) no description available & (reliability: 1620.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709)' T
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf03686_88673-93507' '(at3g57610 : 805.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 747.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 629.0) no description available & (gnl|cdd|84969 : 612.0) no description available & (reliability: 1610.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709)' T
'23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf04001_284851-289781' '(at3g57610 : 724.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 675.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 560.0) no description available & (gnl|cdd|84969 : 552.0) no description available & (reliability: 1448.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709;PF00709)' T
'23.1.2.30' 'nucleotide metabolism.synthesis.purine.IMP dehydrogenase' 'nbv0.5scaffold7573_57711-62694' '(at1g16350 : 637.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79470.1); Has 13531 Blast hits to 12775 proteins in 2707 species: Archae - 178; Bacteria - 7353; Metazoa - 466; Fungi - 180; Plants - 86; Viruses - 2; Other Eukaryotes - 5266 (source: NCBI BLink). & (gnl|cdd|37761 : 560.0) no description available & (gnl|cdd|84798 : 504.0) no description available & (reliability: 1274.0) & (original description: Putative guaB, Description = Inosine-5'-phosphate dehydrogenase, PFAM = PF00478)' T
'23.1.2.30' 'nucleotide metabolism.synthesis.purine.IMP dehydrogenase' 'niben101scf20034_30515-35316' '(at1g16350 : 626.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79470.1); Has 13531 Blast hits to 12775 proteins in 2707 species: Archae - 178; Bacteria - 7353; Metazoa - 466; Fungi - 180; Plants - 86; Viruses - 2; Other Eukaryotes - 5266 (source: NCBI BLink). & (gnl|cdd|37761 : 562.0) no description available & (gnl|cdd|84798 : 507.0) no description available & (reliability: 1252.0) & (original description: Putative guaB, Description = Inosine-5'-phosphate dehydrogenase, PFAM = PF00478)' T
'23.1.2.31' 'nucleotide metabolism.synthesis.purine.GMP synthetase' 'niben101scf06589_41745-48024' '(at1g63660 : 875.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80492 : 759.0) no description available & (gnl|cdd|36835 : 626.0) no description available & (reliability: 1750.0) & (original description: Putative guaA, Description = GMP synthase [glutamine-hydrolyzing], PFAM = PF00958;PF00117)' T
'23.1.2.31' 'nucleotide metabolism.synthesis.purine.GMP synthetase' 'niben101scf11689_22716-28537' '(at1g63660 : 822.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80492 : 718.0) no description available & (gnl|cdd|36835 : 581.0) no description available & (reliability: 1644.0) & (original description: Putative guaA, Description = GMP synthase [glutamine-hydrolyzing], PFAM = PF00958;PF00117)' T
'23.1.2.1001' 'nucleotide metabolism.synthesis.purine' 'dihydroorotate' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1002' 'nucleotide metabolism.synthesis.purine' 'orotate' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1003' 'nucleotide metabolism.synthesis.purine' 'uridine' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1004' 'nucleotide metabolism.synthesis.purine' 'ump' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1005' 'nucleotide metabolism.synthesis.purine' 'udp' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1006' 'nucleotide metabolism.synthesis.purine' 'utp' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1007' 'nucleotide metabolism.synthesis.purine' 'guanine' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1008' 'nucleotide metabolism.synthesis.purine' 'guanosine' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1009' 'nucleotide metabolism.synthesis.purine' 'gmp' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1010' 'nucleotide metabolism.synthesis.purine' 'gdp' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1011' 'nucleotide metabolism.synthesis.purine' 'gtp' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.2.1012' 'nucleotide metabolism.synthesis.purine' 'inosine' 'Co-factor metabolism; nucleotide metabolism' M
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold35709_14489-21678' '(at2g35390 : 464.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 452.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 352.0) no description available & (gnl|cdd|36661 : 302.0) no description available & (reliability: 928.0) & (original description: Putative PRS1, Description = Ribose-phosphate pyrophosphokinase 1, PFAM = PF13793;PF14572)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold67506_3244-8716' '(at2g42910 : 524.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (q9xga1|kprs4_spiol : 516.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (gnl|cdd|36661 : 280.0) no description available & (gnl|cdd|30810 : 122.0) no description available & (reliability: 1048.0) & (original description: Putative v1g119080, Description = Predicted protein, PFAM = PF00156)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold77046_1-5609' '(at1g32380 : 419.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 408.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 347.0) no description available & (gnl|cdd|36661 : 276.0) no description available & (reliability: 838.0) & (original description: Putative kprS, Description = 5-phospho-D-ribosyl alpha-1-diphosphate, PFAM = PF13793)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.5scaffold1446_219240-233077' '(q9xga0|kprs3_spiol : 463.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 447.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 243.0) no description available & (gnl|cdd|30810 : 96.8) no description available & (reliability: 894.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156;PF13793)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben044scf00016273ctg016_1-14751' '(q9xga0|kprs3_spiol : 574.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 544.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 297.0) no description available & (gnl|cdd|30810 : 133.0) no description available & (reliability: 1088.0) & (original description: Putative PRS3, Description = Ribose-phosphate pyrophosphokinase 3, mitochondrial, PFAM = PF13793;PF00156)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben044scf00041062ctg001_1-5355' '(at1g32380 : 545.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 541.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 482.0) no description available & (gnl|cdd|36661 : 383.0) no description available & (reliability: 1090.0) & (original description: Putative PRS1, Description = Ribose-phosphate pyrophosphokinase 1, PFAM = PF13793;PF14572)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf00497_645378-656140' '(at2g35390 : 628.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 617.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 530.0) no description available & (gnl|cdd|36661 : 421.0) no description available & (reliability: 1256.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF13793;PF14572)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf01211_404408-417459' '(at2g44530 : 619.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11359 Blast hits to 11120 proteins in 2784 species: Archae - 259; Bacteria - 6102; Metazoa - 636; Fungi - 683; Plants - 217; Viruses - 13; Other Eukaryotes - 3449 (source: NCBI BLink). & (q9xg98|kprs1_spiol : 613.0) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 527.0) no description available & (gnl|cdd|36661 : 415.0) no description available & (reliability: 1238.0) & (original description: Putative PRS5, Description = Ribose-phosphate pyrophosphokinase 5, chloroplastic, PFAM = PF14572;PF13793)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf01414_245009-250471' '(q9xga1|kprs4_spiol : 548.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (at2g42910 : 546.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|36661 : 301.0) no description available & (gnl|cdd|30810 : 129.0) no description available & (reliability: 1092.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156;PF13793)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf03045_980381-995987' '(q9xga0|kprs3_spiol : 576.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 555.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 299.0) no description available & (gnl|cdd|30810 : 134.0) no description available & (reliability: 1110.0) & (original description: Putative PRS3, Description = Ribose-phosphate pyrophosphokinase 3, mitochondrial, PFAM = PF13793;PF00156)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf04754_393765-401441' '(at2g42910 : 545.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (q9xga1|kprs4_spiol : 538.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (gnl|cdd|36661 : 298.0) no description available & (gnl|cdd|30810 : 124.0) no description available & (reliability: 1090.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf05490_134494-165506' '(at2g35390 : 624.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 615.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 525.0) no description available & (gnl|cdd|36661 : 416.0) no description available & (reliability: 1248.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF14572;PF13793)' T
'23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf11685_141754-150108' '(at1g32380 : 597.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 597.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 519.0) no description available & (gnl|cdd|36661 : 410.0) no description available & (reliability: 1194.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF13793;PF14572)' T
'23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben044scf00007886ctg007_125-7425' '(at2g23970 : 276.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (gnl|cdd|38389 : 251.0) no description available & (gnl|cdd|73284 : 149.0) no description available & (reliability: 506.0) & (original description: Putative GGP5, Description = Gamma-glutamyl peptidase 5, PFAM = PF00117)' T
'23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf00062_105564-113579' '(at2g23970 : 275.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (gnl|cdd|38389 : 255.0) no description available & (gnl|cdd|73284 : 148.0) no description available & (reliability: 508.0) & (original description: Putative GGP5, Description = Gamma-glutamyl peptidase 5, PFAM = PF00117)' T
'23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf03736_281683-286208' '(gnl|cdd|38389 : 279.0) no description available & (at4g30550 : 259.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|73284 : 153.0) no description available & (reliability: 518.0) & (original description: Putative GGP3, Description = Gamma-glutamyl peptidase 3, PFAM = PF00117)' T
'23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf08876_67888-71288' '(gnl|cdd|38389 : 234.0) no description available & (at4g30550 : 215.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|73284 : 136.0) no description available & (reliability: 430.0) & (original description: Putative GGP3, Description = Gamma-glutamyl peptidase 3, PFAM = PF00117)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold80_4519-12682' '(at5g18860 : 1152.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38149 : 210.0) no description available & (gnl|cdd|29575 : 202.0) no description available & (reliability: 2304.0) & (original description: Putative At5g18860, Description = AT5g18860/F17K4_110, PFAM = PF01156;PF01156)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold1193_94882-97868' '(at2g19570 : 273.0) Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.; cytidine deaminase 1 (CDA1); CONTAINS InterPro DOMAIN/s: Cytidine deaminase, homodimeric (InterPro:IPR006263), APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine/deoxycytidylate deaminase, zinc-binding domain (InterPro:IPR013171); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29610.1); Has 2638 Blast hits to 2526 proteins in 1057 species: Archae - 42; Bacteria - 2022; Metazoa - 110; Fungi - 58; Plants - 130; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (gnl|cdd|82775 : 197.0) no description available & (gnl|cdd|36051 : 120.0) no description available & (reliability: 546.0) & (original description: Putative CDA1, Description = Cytidine deaminase 1, PFAM = PF00383;PF08211)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold66382_1-7935' '(at1g68720 : 325.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|29828 : 157.0) no description available & (gnl|cdd|36236 : 133.0) no description available & (reliability: 650.0) & (original description: Putative tadA, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold69801_4305-9413' '(at4g19180 : 740.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 354.0) no description available & (gnl|cdd|85272 : 177.0) no description available & (p80595|apy_soltu : 85.9) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 1480.0) & (original description: Putative APY7, Description = Probable apyrase 7, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold35_1305094-1315208' '(at2g38680 : 327.0) 5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38338 : 197.0) no description available & (gnl|cdd|86957 : 174.0) no description available & (reliability: 654.0) & (original description: Putative NT5C3B, Description = 5'-nucleotidase, PFAM = PF05822)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold80_793745-800698' '(at4g04880 : 461.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 219.0) no description available & (gnl|cdd|36313 : 213.0) no description available & (reliability: 922.0) & (original description: Putative At4g04880, Description = Adenosine deaminase-like protein, PFAM = PF00962;PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold813_488979-502430' '(at4g34890 : 1823.0) Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.; xanthine dehydrogenase 1 (XDH1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2 (TAIR:AT4G34900.1); Has 21952 Blast hits to 20911 proteins in 1336 species: Archae - 451; Bacteria - 13165; Metazoa - 1072; Fungi - 101; Plants - 265; Viruses - 0; Other Eukaryotes - 6898 (source: NCBI BLink). & (gnl|cdd|35651 : 1428.0) no description available & (gnl|cdd|34250 : 708.0) no description available & (q6z351|aldol_orysa : 451.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (reliability: 3646.0) & (original description: Putative XDH1, Description = Xanthine dehydrogenase 1, PFAM = PF00941;PF01799;PF03450;PF01315;PF02738;PF00111)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1542_382161-390779' '(at1g68720 : 364.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|30935 : 170.0) no description available & (gnl|cdd|36236 : 144.0) no description available & (reliability: 728.0) & (original description: Putative yfhC, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1646_37232-43169' '(at5g54390 : 466.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 386.0) no description available & (q40639|dpnp_orysa : 236.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 226.0) no description available & (reliability: 932.0) & (original description: Putative AHL, Description = PAP-specific phosphatase HAL2-like, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1736_188144-198426' '(gnl|cdd|36741 : 469.0) no description available & (at5g63980 : 458.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 398.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 278.0) no description available & (reliability: 916.0) & (original description: Putative tol1, Description = 3'(2'),5'-bisphosphate nucleotidase, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1996_274198-299880' '(at2g38280 : 1276.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 1136.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|36312 : 866.0) no description available & (gnl|cdd|30062 : 858.0) no description available & (reliability: 2552.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold3631_154456-164030' '(at4g05090 : 470.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 311.0) no description available & (gnl|cdd|73273 : 200.0) no description available & (q40639|dpnp_orysa : 131.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 940.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold4175_37271-46975' '(at4g05090 : 400.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 287.0) no description available & (gnl|cdd|73273 : 195.0) no description available & (q40639|dpnp_orysa : 110.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 800.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold4316_35792-39100' '(p80595|apy_soltu : 264.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 144.0) no description available & (at5g18280 : 141.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 96.6) no description available & (reliability: 282.0) & (original description: Putative EEF45, Description = EEF45 protein, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben044scf00005389ctg009_5887-12063' '(at5g54390 : 467.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 386.0) no description available & (q40639|dpnp_orysa : 236.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 227.0) no description available & (reliability: 934.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben044scf00019004ctg005_6739-11377' '(at4g04880 : 436.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 214.0) no description available & (gnl|cdd|36313 : 195.0) no description available & (reliability: 872.0) & (original description: Putative adal, Description = Adenosine deaminase-like protein, PFAM = PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'niben044scf00038884ctg000_760-6819' '(at5g18280 : 463.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p52914|ntpa_pea : 374.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (gnl|cdd|36599 : 358.0) no description available & (gnl|cdd|85272 : 323.0) no description available & (reliability: 926.0) & (original description: Putative apy2, Description = Apyrase 2, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf00149_603961-625092' '(at2g38280 : 1277.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 1135.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|36312 : 866.0) no description available & (gnl|cdd|30062 : 858.0) no description available & (reliability: 2554.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf00465_86124-94513' '(at1g68720 : 365.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|30935 : 173.0) no description available & (gnl|cdd|36236 : 147.0) no description available & (reliability: 730.0) & (original description: Putative yfhC, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf00782_203472-215098' '(at2g38680 : 396.0) 5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38338 : 236.0) no description available & (gnl|cdd|86957 : 196.0) no description available & (reliability: 792.0) & (original description: Putative Os03g0648900, Description = Os03g0648900 protein, PFAM = PF05822)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf00966_19394-27018' '(at2g02970 : 575.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14230.1); Has 1462 Blast hits to 1454 proteins in 233 species: Archae - 0; Bacteria - 37; Metazoa - 611; Fungi - 316; Plants - 335; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36600 : 391.0) no description available & (gnl|cdd|85272 : 260.0) no description available & (p52914|ntpa_pea : 162.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative APY6, Description = Probable apyrase 6, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf01237_283395-288449' '(at4g19180 : 748.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 353.0) no description available & (gnl|cdd|85272 : 173.0) no description available & (p80595|apy_soltu : 85.5) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 1496.0) & (original description: Putative APY7, Description = Probable apyrase 7, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf01529_68677-78251' '(at4g05090 : 482.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 322.0) no description available & (gnl|cdd|73273 : 211.0) no description available & (q40639|dpnp_orysa : 135.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 964.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf01657_159520-169067' '(gnl|cdd|36741 : 464.0) no description available & (at5g63980 : 453.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 396.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 273.0) no description available & (reliability: 906.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf01826_232027-237537' '(at3g48540 : 348.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 205.0) no description available & (gnl|cdd|29829 : 151.0) no description available & (reliability: 696.0) & (original description: Putative DCTD, Description = Deoxycytidylate deaminase, PFAM = PF00383)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf01975_199512-224161' '(p80595|apy_soltu : 265.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (at5g18280 : 151.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|85272 : 142.0) no description available & (gnl|cdd|36599 : 92.7) no description available & (reliability: 302.0) & (original description: Putative EEF45, Description = EEF45 protein, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf02043_475191-507186' '(at2g38280 : 950.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 937.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|30062 : 838.0) no description available & (gnl|cdd|36312 : 814.0) no description available & (reliability: 1900.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf02468_1070304-1078263' '(p04670|uric1_soybn : 462.0) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase II isozyme 1) (Urate oxidase) (Nodulin 35) (N-35) (Nodule-specific uricase) - Glycine max (Soybean) & (at2g26230 : 457.0) uricase / urate oxidase / nodulin 35, putative; FUNCTIONS IN: urate oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, purine base metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uricase, conserved site (InterPro:IPR019842), Uricase (InterPro:IPR002042); Has 677 Blast hits to 673 proteins in 262 species: Archae - 5; Bacteria - 239; Metazoa - 140; Fungi - 185; Plants - 90; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|29760 : 381.0) no description available & (gnl|cdd|36812 : 327.0) no description available & (reliability: 914.0) & (original description: Putative PsUr, Description = Uricase, PFAM = PF01014;PF01014)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf03915_159098-176519' '(gnl|cdd|36741 : 477.0) no description available & (at5g63980 : 468.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 405.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 285.0) no description available & (reliability: 936.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf04122_422523-431558' '(at4g05090 : 350.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 242.0) no description available & (gnl|cdd|73273 : 161.0) no description available & (q40639|dpnp_orysa : 89.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 700.0) & (original description: Putative At4g05090, Description = Putative inositol monophosphatase family protein-like, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf04122_422585-430950' '(at4g05090 : 288.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 207.0) no description available & (gnl|cdd|73273 : 128.0) no description available & (reliability: 576.0) & (original description: Putative At4g05090, Description = Putative inositol monophosphatase family protein-like, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf04674_102885-111831' '(at5g18860 : 1195.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38149 : 214.0) no description available & (gnl|cdd|29575 : 213.0) no description available & (reliability: 2390.0) & (original description: Putative At5g18860, Description = AT5g18860/F17K4_110, PFAM = PF01156;PF01156)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf04674_108420-111059' '(at5g18860 : 158.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At5g18860, Description = Inosine-uridine preferring nucleoside hydrolase, PFAM = )' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf04724_323934-342550' '(at5g54390 : 456.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 391.0) no description available & (gnl|cdd|73273 : 218.0) no description available & (q40639|dpnp_orysa : 210.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 912.0) & (original description: Putative AHL, Description = PAP-specific phosphatase HAL2-like, PFAM = PF00459)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf05918_376483-388289' '(p80595|apy_soltu : 681.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 433.0) no description available & (at5g18280 : 347.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 321.0) no description available & (reliability: 694.0) & (original description: Putative RROP1, Description = Apyrase, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf05918_376507-388155' '(p80595|apy_soltu : 511.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 380.0) no description available & (gnl|cdd|36599 : 281.0) no description available & (at5g18280 : 271.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative Apy2, Description = Apyrase 2, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf06084_149839-157075' '(at4g04880 : 480.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 234.0) no description available & (gnl|cdd|36313 : 227.0) no description available & (reliability: 960.0) & (original description: Putative adal, Description = Adenosine deaminase-like protein, PFAM = PF00962)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf06782_199810-207853' '(at4g34890 : 496.0) Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.; xanthine dehydrogenase 1 (XDH1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2 (TAIR:AT4G34900.1); Has 21952 Blast hits to 20911 proteins in 1336 species: Archae - 451; Bacteria - 13165; Metazoa - 1072; Fungi - 101; Plants - 265; Viruses - 0; Other Eukaryotes - 6898 (source: NCBI BLink). & (gnl|cdd|35651 : 395.0) no description available & (gnl|cdd|34250 : 303.0) no description available & (q852m2|aldo3_orysa : 157.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (reliability: 992.0) & (original description: Putative aox1, Description = Xanthine dehydrogenase, PFAM = PF02738)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf06806_443763-460387' '(at5g18280 : 563.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 432.0) no description available & (p80595|apy_soltu : 407.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 365.0) no description available & (reliability: 1126.0) & (original description: Putative APY2, Description = Apyrase 2, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf06876_175843-183648' '(at5g28050 : 277.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G05300.1); Has 7983 Blast hits to 7983 proteins in 2406 species: Archae - 71; Bacteria - 5581; Metazoa - 106; Fungi - 179; Plants - 275; Viruses - 0; Other Eukaryotes - 1771 (source: NCBI BLink). & (gnl|cdd|36236 : 153.0) no description available & (gnl|cdd|29828 : 129.0) no description available & (reliability: 554.0) & (original description: Putative guaD, Description = Guanine deaminase, PFAM = PF00383)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf07742_219668-227397' '(at2g02970 : 534.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14230.1); Has 1462 Blast hits to 1454 proteins in 233 species: Archae - 0; Bacteria - 37; Metazoa - 611; Fungi - 316; Plants - 335; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36600 : 378.0) no description available & (gnl|cdd|85272 : 256.0) no description available & (p52914|ntpa_pea : 155.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 1068.0) & (original description: Putative APY6, Description = Probable apyrase 6, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf07951_380137-388148' '(at3g04080 : 479.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.; apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36599 : 368.0) no description available & (p52914|ntpa_pea : 360.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (gnl|cdd|85272 : 312.0) no description available & (reliability: 958.0) & (original description: Putative apy2, Description = Apyrase 2, PFAM = PF01150)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf08419_227193-243641' '(at4g04955 : 675.0) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.; allantoinase (ALN); CONTAINS InterPro DOMAIN/s: Amidohydrolase 1 (InterPro:IPR006680), Allantoinase (InterPro:IPR017593), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: pyrimidine 2 (TAIR:AT5G12200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30058 : 535.0) no description available & (gnl|cdd|37795 : 229.0) no description available & (reliability: 1350.0) & (original description: Putative ALN, Description = Allantoinase, PFAM = PF01979)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf09025_228546-233853' '(at3g48540 : 351.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 197.0) no description available & (gnl|cdd|29829 : 147.0) no description available & (reliability: 702.0) & (original description: Putative dctd, Description = dCMP deaminase, PFAM = PF00383)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf09025_229995-233793' '(at3g48540 : 125.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 88.2) no description available & (reliability: 250.0) & (original description: Putative dctd, Description = Deoxycytidylate deaminase, PFAM = PF00383)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf11383_46183-54641' '(at5g28050 : 280.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G05300.1); Has 7983 Blast hits to 7983 proteins in 2406 species: Archae - 71; Bacteria - 5581; Metazoa - 106; Fungi - 179; Plants - 275; Viruses - 0; Other Eukaryotes - 1771 (source: NCBI BLink). & (gnl|cdd|36236 : 152.0) no description available & (gnl|cdd|29828 : 127.0) no description available & (reliability: 560.0) & (original description: Putative cda, Description = Cytidine deaminase, PFAM = PF00383)' T
'23.2' 'nucleotide metabolism.degradation' 'niben101scf15645_79082-92493' '(at4g19180 : 244.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 216.0) no description available & (gnl|cdd|85272 : 171.0) no description available & (p80595|apy_soltu : 92.8) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 488.0) & (original description: Putative L484_014576, Description = Nucleoside-diphosphatase mig-23, PFAM = PF01150)' T
'23.2.1' 'nucleotide metabolism.degradation.pyrimidine' '' ''
'23.2.1.1' 'nucleotide metabolism.degradation.pyrimidine.5'-nucleotidase' '' ''
'23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben044scf00005145ctg002_2083-19008' '(at1g05620 : 470.0) uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29578 : 364.0) no description available & (gnl|cdd|38149 : 246.0) no description available & (reliability: 940.0) & (original description: Putative URH2, Description = Probable uridine nucleosidase 2, PFAM = PF01156)' T
'23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben044scf00006538ctg000_1773-5970' '(at2g36310 : 508.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|29578 : 384.0) no description available & (gnl|cdd|38149 : 230.0) no description available & (reliability: 1016.0) & (original description: Putative rihB, Description = Inosine/uridine-preferring nucleoside hydrolase, PFAM = PF01156)' T
'23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben101scf00375_135659-142733' '(at2g36310 : 533.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|29578 : 416.0) no description available & (gnl|cdd|38149 : 257.0) no description available & (reliability: 1066.0) & (original description: Putative URH1, Description = Uridine nucleosidase 1, PFAM = PF01156)' T
'23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben101scf05183_24824-47041' '(at1g05620 : 468.0) uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29578 : 362.0) no description available & (gnl|cdd|38149 : 244.0) no description available & (reliability: 936.0) & (original description: Putative URH2, Description = Probable uridine nucleosidase 2, PFAM = PF01156)' T
'23.2.1.3' 'nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase' 'niben101scf01182_4135-19659' '(at3g17810 : 686.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (gnl|cdd|37010 : 540.0) no description available & (gnl|cdd|73382 : 452.0) no description available & (reliability: 1372.0) & (original description: Putative PYD1, Description = Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic, PFAM = PF01180)' T
'23.2.1.3' 'nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase' 'niben101scf01249_550408-556704' '(at3g17810 : 682.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (gnl|cdd|37010 : 536.0) no description available & (gnl|cdd|73382 : 453.0) no description available & (reliability: 1364.0) & (original description: Putative preA, Description = PreA protein, PFAM = PF01180)' T
'23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'nbv0.5scaffold462_359117-375396' '(at5g12200 : 852.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 664.0) no description available & (gnl|cdd|30057 : 631.0) no description available & (reliability: 1704.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T
'23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'niben101scf05201_583062-592588' '(at5g12200 : 858.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 658.0) no description available & (gnl|cdd|30057 : 628.0) no description available & (reliability: 1716.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T
'23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'niben101scf09860_38972-57308' '(at5g12200 : 814.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 638.0) no description available & (gnl|cdd|30057 : 605.0) no description available & (reliability: 1628.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T
'23.2.1.5' 'nucleotide metabolism.degradation.pyrimidine.beta-ureidopropionase' 'niben101scf02044_422404-428134' '(at5g64370 : 714.0) PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.; beta-ureidopropionase (BETA-UP); FUNCTIONS IN: beta-ureidopropionase activity; INVOLVED IN: nitrogen compound metabolic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: nitrilase-like protein 1 (TAIR:AT2G27450.2); Has 6588 Blast hits to 6556 proteins in 1697 species: Archae - 146; Bacteria - 4263; Metazoa - 430; Fungi - 262; Plants - 305; Viruses - 11; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36026 : 659.0) no description available & (gnl|cdd|85033 : 150.0) no description available & (q3hvn1|agub_soltu : 87.4) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 1428.0) & (original description: Putative PYD3, Description = Beta-ureidopropionase, PFAM = PF00795)' T
'23.2.1.5' 'nucleotide metabolism.degradation.pyrimidine.beta-ureidopropionase' 'niben101scf02323_111841-119305' '(at5g64370 : 721.0) PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.; beta-ureidopropionase (BETA-UP); FUNCTIONS IN: beta-ureidopropionase activity; INVOLVED IN: nitrogen compound metabolic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: nitrilase-like protein 1 (TAIR:AT2G27450.2); Has 6588 Blast hits to 6556 proteins in 1697 species: Archae - 146; Bacteria - 4263; Metazoa - 430; Fungi - 262; Plants - 305; Viruses - 11; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36026 : 661.0) no description available & (gnl|cdd|85033 : 153.0) no description available & (q3hvn1|agub_soltu : 90.5) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 1442.0) & (original description: Putative PYD3, Description = Beta-ureidopropionase, PFAM = PF00795)' T
'23.2.1.6' 'nucleotide metabolism.degradation.pyrimidine.cytidine deaminase' '' ''
'23.2.2' 'nucleotide metabolism.degradation.purine' 'nbv0.5scaffold3757_122405-133137' '(at2g03530 : 504.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 501.0) no description available & (q41706|upsa3_vigun : 457.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1000.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.2.2' 'nucleotide metabolism.degradation.purine' 'niben044scf00004630ctg004_1567-4290' '(at2g03530 : 229.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 198.0) no description available & (q41706|upsa3_vigun : 176.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 456.0) & (original description: Putative A3, Description = Putative ureide permease A3, PFAM = PF07168)' T
'23.2.2' 'nucleotide metabolism.degradation.purine' 'niben101scf03971_243170-248641' '(at2g03530 : 536.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 513.0) no description available & (q41706|upsa3_vigun : 487.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1052.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.2.2' 'nucleotide metabolism.degradation.purine' 'niben101scf05416_38229-45915' '(at2g03530 : 545.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 520.0) no description available & (q41706|upsa3_vigun : 471.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1074.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.2.2.1' 'nucleotide metabolism.degradation.purine.AMP deaminase' '' ''
'23.2.2.8' 'nucleotide metabolism.degradation.purine.guanosine deaminase' '' ''
'23.2.2.9' 'nucleotide metabolism.degradation.purine.guanosine nucleosidase' '' ''
'23.2.2.10' 'nucleotide metabolism.degradation.purine.guanine deaminase' '' ''
'23.2.2.11' 'nucleotide metabolism.degradation.purine.xanthine dehydrogenase' '' ''
'23.2.2.1001' 'nucleotide metabolism.degradation.purine' 'uracil' 'Co-factor metabolism; nucleotide metabolism.degradation' M
'23.2.2.1002' 'nucleotide metabolism.degradation.purine' 'beta-alanine' 'Co-factor metabolism; nucleotide metabolism.degradation; aspartate degradation' M
'23.2.2.1003' 'nucleotide metabolism.degradation.purine' 'xanthosine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M
'23.2.2.1004' 'nucleotide metabolism.degradation.purine' 'xanthine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M
'23.2.2.1005' 'nucleotide metabolism.degradation.purine' 'hypoxanthine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M
'23.2.2.1006' 'nucleotide metabolism.degradation.purine' 'urate' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M
'23.2.2.1007' 'nucleotide metabolism.degradation.purine' 'allantoin' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M
'23.3' 'nucleotide metabolism.salvage' 'nbv0.3scaffold31608_16359-22788' '(at1g72040 : 618.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 290.0) no description available & (gnl|cdd|30191 : 184.0) no description available & (reliability: 1236.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T
'23.3' 'nucleotide metabolism.salvage' 'nbv0.5scaffold3757_122405-133137' '(at2g03530 : 504.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 501.0) no description available & (q41706|upsa3_vigun : 457.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1000.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.3' 'nucleotide metabolism.salvage' 'nbv0.5scaffold7288_31311-47774' '(at1g75210 : 814.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37680 : 418.0) no description available & (gnl|cdd|86943 : 395.0) no description available & (reliability: 1628.0) & (original description: Putative NTD1, Description = Putative uncharacterized protein NTD1, PFAM = PF05761)' T
'23.3' 'nucleotide metabolism.salvage' 'niben044scf00004630ctg004_1567-4290' '(at2g03530 : 229.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 198.0) no description available & (q41706|upsa3_vigun : 176.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 456.0) & (original description: Putative A3, Description = Putative ureide permease A3, PFAM = PF07168)' T
'23.3' 'nucleotide metabolism.salvage' 'niben044scf00035710ctg001_1341-6152' '(at1g72040 : 581.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 278.0) no description available & (gnl|cdd|30191 : 183.0) no description available & (reliability: 1162.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T
'23.3' 'nucleotide metabolism.salvage' 'niben101scf02444_122135-128851' '(at1g72040 : 625.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 291.0) no description available & (gnl|cdd|30191 : 183.0) no description available & (reliability: 1250.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T
'23.3' 'nucleotide metabolism.salvage' 'niben101scf03971_243170-248641' '(at2g03530 : 536.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 513.0) no description available & (q41706|upsa3_vigun : 487.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1052.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.3' 'nucleotide metabolism.salvage' 'niben101scf04113_1098507-1111376' '(at1g75210 : 839.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37680 : 431.0) no description available & (gnl|cdd|86943 : 402.0) no description available & (reliability: 1678.0) & (original description: Putative NTD1, Description = Putative uncharacterized protein NTD1, PFAM = PF05761)' T
'23.3' 'nucleotide metabolism.salvage' 'niben101scf05416_38229-45915' '(at2g03530 : 545.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 520.0) no description available & (q41706|upsa3_vigun : 471.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1074.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T
'23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'nbv0.3scaffold51179_255-11453' '(at2g23420 : 952.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 561.0) no description available & (gnl|cdd|29617 : 467.0) no description available & (reliability: 1904.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'nbv0.5scaffold1429_325463-336800' '(at2g23420 : 966.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 566.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1932.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'niben101scf01802_215615-234033' '(at2g23420 : 964.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 562.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1928.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'nbv0.3scaffold64292_119-5342' '(at5g11160 : 279.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 248.0) no description available & (q43199|apt1_wheat : 230.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 213.0) no description available & (reliability: 558.0) & (original description: Putative aprt, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'nbv0.5scaffold7321_26544-31767' '(at5g11160 : 295.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 255.0) no description available & (q43199|apt1_wheat : 230.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 209.0) no description available & (reliability: 590.0) & (original description: Putative APT5, Description = Adenine phosphoribosyltransferase 5, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf01646_14452-22664' '(at4g22570 : 282.0) Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.; adenine phosphoribosyl transferase 3 (APT3); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 4 (TAIR:AT4G12440.2); Has 8946 Blast hits to 8945 proteins in 2488 species: Archae - 280; Bacteria - 6058; Metazoa - 171; Fungi - 181; Plants - 166; Viruses - 0; Other Eukaryotes - 2090 (source: NCBI BLink). & (gnl|cdd|36924 : 269.0) no description available & (q43199|apt1_wheat : 251.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 226.0) no description available & (reliability: 564.0) & (original description: Putative APT3, Description = Adenine phosphoribosyltransferase 3, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf04651_53984-59548' '(at5g11160 : 279.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 248.0) no description available & (q43199|apt1_wheat : 234.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 212.0) no description available & (reliability: 558.0) & (original description: Putative APT5, Description = Adenine phosphoribosyltransferase 5, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf04651_53995-58814' '(at5g11160 : 209.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 189.0) no description available & (q43199|apt1_wheat : 176.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 162.0) no description available & (reliability: 418.0) & (original description: Putative APT, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf06467_146192-154849' '(gnl|cdd|36924 : 273.0) no description available & (at1g27450 : 255.0) Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP.; adenine phosphoribosyl transferase 1 (APT1); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 3 (TAIR:AT4G22570.1). & (q43199|apt1_wheat : 248.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 234.0) no description available & (reliability: 510.0) & (original description: Putative APT1, Description = Adenine phosphoribosyltransferase 1, PFAM = PF00156)' T
'23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf06753_74178-82899' '(at4g22570 : 203.0) Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.; adenine phosphoribosyl transferase 3 (APT3); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 4 (TAIR:AT4G12440.2); Has 8946 Blast hits to 8945 proteins in 2488 species: Archae - 280; Bacteria - 6058; Metazoa - 171; Fungi - 181; Plants - 166; Viruses - 0; Other Eukaryotes - 2090 (source: NCBI BLink). & (gnl|cdd|36924 : 203.0) no description available & (q43199|apt1_wheat : 176.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 170.0) no description available & (reliability: 406.0) & (original description: Putative APT, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T
'23.3.1.2' 'nucleotide metabolism.salvage.phosphoribosyltransferases.hgprt' 'nbv0.5scaffold7278_47493-51160' '(at1g71750 : 210.0) Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination.; Hypoxanthine-guanine phosphoribosyltransferase (HGPT); FUNCTIONS IN: transferase activity, hypoxanthine phosphoribosyltransferase activity; INVOLVED IN: guanine metabolic process, nucleoside metabolic process, seed germination, hypoxanthine metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hypoxanthine phosphoribosyl transferase (InterPro:IPR005904), Phosphoribosyltransferase (InterPro:IPR000836). & (gnl|cdd|30979 : 155.0) no description available & (gnl|cdd|38577 : 125.0) no description available & (reliability: 420.0) & (original description: Putative hprT, Description = Hypoxanthine-guanine phosphoribosyltransferase, PFAM = PF00156)' T
'23.3.1.2' 'nucleotide metabolism.salvage.phosphoribosyltransferases.hgprt' 'niben101scf01942_580396-585177' '(at1g71750 : 268.0) Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination.; Hypoxanthine-guanine phosphoribosyltransferase (HGPT); FUNCTIONS IN: transferase activity, hypoxanthine phosphoribosyltransferase activity; INVOLVED IN: guanine metabolic process, nucleoside metabolic process, seed germination, hypoxanthine metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hypoxanthine phosphoribosyl transferase (InterPro:IPR005904), Phosphoribosyltransferase (InterPro:IPR000836). & (gnl|cdd|30979 : 213.0) no description available & (gnl|cdd|38577 : 168.0) no description available & (reliability: 536.0) & (original description: Putative hprT, Description = Hypoxanthine-guanine phosphoribosyltransferase, PFAM = PF00156)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.3scaffold25760_855-11101' '(at4g26510 : 760.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 501.0) no description available & (gnl|cdd|30196 : 280.0) no description available & (reliability: 1520.0) & (original description: Putative udkA, Description = Uridine kinase, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.3scaffold39997_1408-10711' '(at1g55810 : 780.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 3 (UKL3); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39404 : 499.0) no description available & (gnl|cdd|30196 : 283.0) no description available & (p26302|kppr_wheat : 80.5) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (reliability: 1560.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold136_800389-814251' '(at5g40870 : 827.0) Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.; uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39404 : 524.0) no description available & (gnl|cdd|30196 : 302.0) no description available & (p19824|kppr_chlre : 80.1) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Chlamydomonas reinhardtii & (reliability: 1654.0) & (original description: Putative UKL1, Description = Uridine kinase-like protein 1, chloroplastic, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold1844_322727-332598' '(at4g26510 : 683.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 450.0) no description available & (gnl|cdd|30196 : 278.0) no description available & (reliability: 1366.0) & (original description: Putative UKL3, Description = Uridine kinase, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold2400_297310-301186' '(at4g26510 : 233.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 174.0) no description available & (gnl|cdd|30384 : 149.0) no description available & (reliability: 466.0) & (original description: Putative uprt, Description = Uridine kinase, PFAM = PF14681)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf00675_163326-172773' '(at1g55810 : 781.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 3 (UKL3); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39404 : 495.0) no description available & (gnl|cdd|30196 : 282.0) no description available & (reliability: 1562.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf03766_842132-852396' '(at3g27440 : 630.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 5 (UKL5); FUNCTIONS IN: uracil phosphoribosyltransferase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 13214 Blast hits to 13202 proteins in 2627 species: Archae - 217; Bacteria - 10041; Metazoa - 552; Fungi - 516; Plants - 596; Viruses - 2; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|39404 : 425.0) no description available & (gnl|cdd|30196 : 287.0) no description available & (reliability: 1260.0) & (original description: Putative UKL5, Description = Uridine kinase-like protein 5, PFAM = PF14681;PF00485)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf04847_399254-408716' '(at4g26510 : 751.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 497.0) no description available & (gnl|cdd|30196 : 277.0) no description available & (reliability: 1502.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF00485;PF14681)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf05137_135301-150935' '(p93394|upp_tobac : 404.0) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (at3g53900 : 337.0) Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.; uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80534 : 234.0) no description available & (gnl|cdd|39404 : 145.0) no description available & (reliability: 674.0) & (original description: Putative upp, Description = Uracil phosphoribosyltransferase, PFAM = PF14681)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf07477_82865-95107' '(p93394|upp_tobac : 434.0) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (at3g53900 : 365.0) Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.; uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80534 : 249.0) no description available & (gnl|cdd|39404 : 151.0) no description available & (reliability: 730.0) & (original description: Putative UPP, Description = Uracil phosphoribosyltransferase, PFAM = PF14681)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf08523_12338-30853' '(at5g40870 : 832.0) Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.; uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39404 : 520.0) no description available & (gnl|cdd|30196 : 303.0) no description available & (p19824|kppr_chlre : 81.6) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Chlamydomonas reinhardtii & (reliability: 1664.0) & (original description: Putative UKL1, Description = Uridine kinase-like protein 1, chloroplastic, PFAM = PF00485;PF14681)' T
'23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf21107_82403-93423' '(at4g26510 : 690.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 454.0) no description available & (gnl|cdd|30196 : 281.0) no description available & (reliability: 1380.0) & (original description: Putative UKL3, Description = Uridine kinase, PFAM = PF14681;PF00485)' T
'23.3.2' 'nucleotide metabolism.salvage.nucleoside kinases' '' ''
'23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf04090_125389-132038' '(at3g09820 : 603.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 512.0) no description available & (o49923|adk_phypa : 478.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 371.0) no description available & (reliability: 1206.0) & (original description: Putative ADK, Description = ADK, PFAM = PF00294)' T
'23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf04652_117090-123652' '(at3g09820 : 602.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 501.0) no description available & (o49923|adk_phypa : 475.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 362.0) no description available & (reliability: 1204.0) & (original description: Putative adkb, Description = Adenosine kinase b, PFAM = PF00294)' T
'23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf05442_278062-286090' '(at3g09820 : 612.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 513.0) no description available & (o49923|adk_phypa : 481.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 361.0) no description available & (reliability: 1224.0) & (original description: Putative ADK1, Description = Adenosine kinase 1, PFAM = PF00294)' T
'23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf25706_35889-39143' '(at3g09820 : 276.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 223.0) no description available & (o49923|adk_phypa : 221.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 166.0) no description available & (reliability: 552.0) & (original description: Putative ADK, Description = Adenosine kinase 2, PFAM = PF00294)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.3scaffold6787_22643-34212' '(at1g73980 : 900.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|30201 : 189.0) no description available & (gnl|cdd|39404 : 187.0) no description available & (reliability: 1800.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.3scaffold40177_149-7361' '(at2g01460 : 657.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1). & (gnl|cdd|30201 : 136.0) no description available & (gnl|cdd|39404 : 87.3) no description available & (reliability: 1314.0) & (original description: Putative Os04g0280250, Description = Os04g0280250 protein, PFAM = )' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.5scaffold857_418637-428245' '(at1g26190 : 926.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 196.0) no description available & (gnl|cdd|30201 : 192.0) no description available & (reliability: 1852.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.5scaffold6480_93057-102036' '(at1g03030 : 355.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|37913 : 271.0) no description available & (gnl|cdd|82901 : 148.0) no description available & (reliability: 710.0) & (original description: Putative Sb08g020570, Description = Putative uncharacterized protein Sb08g020570, PFAM = PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00010839ctg001_228-9581' '(at1g73980 : 781.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|30201 : 192.0) no description available & (gnl|cdd|39404 : 155.0) no description available & (reliability: 1562.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00023578ctg008_5823-26799' '(at2g01460 : 1365.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1). & (gnl|cdd|30201 : 168.0) no description available & (gnl|cdd|39404 : 120.0) no description available & (reliability: 2730.0) & (original description: Putative At2g01460, Description = Phosphoribulokinase/uridine kinase domain protein, PFAM = PF00485;PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00028284ctg007_1-4132' '(at1g26190 : 242.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|30201 : 98.4) no description available & (reliability: 484.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf01661_271405-300175' '(at1g26190 : 899.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 194.0) no description available & (gnl|cdd|30201 : 193.0) no description available & (reliability: 1798.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf05989_400876-410965' '(at1g26190 : 933.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 204.0) no description available & (gnl|cdd|30201 : 195.0) no description available & (reliability: 1866.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf08127_809699-821391' '(at1g26190 : 915.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|30201 : 189.0) no description available & (gnl|cdd|39404 : 186.0) no description available & (reliability: 1830.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf08127_809732-821412' '(at1g26190 : 895.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 187.0) no description available & (gnl|cdd|30201 : 178.0) no description available & (reliability: 1790.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T
'23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf09745_198-9265' '(at1g03030 : 355.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|37913 : 275.0) no description available & (gnl|cdd|82901 : 154.0) no description available & (reliability: 710.0) & (original description: Putative At1g03030, Description = At1g03030, PFAM = PF00485)' T
'23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'nbv0.5scaffold2826_67566-72212' '(o81263|kith_orysa : 318.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at3g07800 : 295.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink). & (gnl|cdd|38335 : 266.0) no description available & (gnl|cdd|84654 : 192.0) no description available & (reliability: 590.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T
'23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf00629_58930-74129' '(o81263|kith_orysa : 314.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at3g07800 : 297.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink). & (gnl|cdd|38335 : 263.0) no description available & (gnl|cdd|84654 : 190.0) no description available & (reliability: 594.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T
'23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf01987_179664-186177' '(o81263|kith_orysa : 310.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 301.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38335 : 261.0) no description available & (gnl|cdd|84654 : 186.0) no description available & (reliability: 602.0) & (original description: Putative thyB, Description = Thymidine kinase, PFAM = PF00265)' T
'23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf07682_111938-121179' '(o81263|kith_orysa : 296.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 288.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38335 : 248.0) no description available & (gnl|cdd|84654 : 182.0) no description available & (reliability: 576.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold676_5819-17158' '(at3g12600 : 195.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 118.0) no description available & (gnl|cdd|72903 : 108.0) no description available & (reliability: 390.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold2236_53073-59245' '(at5g20070 : 570.0) nudix hydrolase homolog 19 (NUDX19); FUNCTIONS IN: hydrolase activity, metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc ribbon, NADH pyrophosphatase (InterPro:IPR015376), NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NADH pyrophosphatase-like, N-terminal (InterPro:IPR015375), NUDIX hydrolase domain (InterPro:IPR000086); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38294 : 276.0) no description available & (gnl|cdd|32645 : 207.0) no description available & (reliability: 1140.0) & (original description: Putative NUDT19, Description = Nudix hydrolase 19, chloroplastic, PFAM = PF00293;PF09297;PF09296)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold4100_1888-8859' '(at1g28960 : 355.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 187.0) no description available & (gnl|cdd|72884 : 176.0) no description available & (reliability: 710.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold4987_14004-21829' '(at3g46200 : 304.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold21616_1-4823' '(at3g12600 : 189.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 119.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 378.0) & (original description: Putative NUDX13, Description = Nudix hydrolase 13, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold35993_5938-13475' '(at5g47240 : 365.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 292.0) no description available & (gnl|cdd|72906 : 179.0) no description available & (reliability: 730.0) & (original description: Putative NUDT8, Description = Nudix hydrolase 8, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold48393_12489-15571' '(at5g19460 : 429.0) nudix hydrolase homolog 20 (NUDT20); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 24 (TAIR:AT5G19470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72896 : 222.0) no description available & (gnl|cdd|39514 : 173.0) no description available & (reliability: 858.0) & (original description: Putative NUDT20, Description = Nudix hydrolase 20, chloroplastic, PFAM = PF00293;PF15916)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold53478_3578-9153' '(at5g47240 : 231.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 201.0) no description available & (gnl|cdd|72906 : 106.0) no description available & (reliability: 462.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold59490_611-3924' '(at2g01670 : 184.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 141.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 368.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold70858_2260-9105' '(at2g42070 : 335.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 198.0) no description available & (gnl|cdd|38294 : 171.0) no description available & (reliability: 670.0) & (original description: Putative adpP, Description = ADP-ribose pyrophosphatase, PFAM = PF00293;PF14803)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold99_409533-430829' '(at2g42070 : 338.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 202.0) no description available & (gnl|cdd|38294 : 176.0) no description available & (reliability: 676.0) & (original description: Putative NUDT23, Description = Nudix hydrolase 23, chloroplastic, PFAM = PF00293;PF14803)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold122_709414-728936' '(at3g12600 : 221.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 132.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 442.0) & (original description: Putative Sb01g003940, Description = Putative uncharacterized protein Sb01g003940, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold255_159370-164945' '(at5g47240 : 209.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 185.0) no description available & (gnl|cdd|72906 : 88.8) no description available & (reliability: 418.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold540_399442-405199' '(at5g47650 : 306.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 269.0) no description available & (gnl|cdd|72906 : 149.0) no description available & (reliability: 612.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold600_639247-644317' '(gnl|cdd|35867 : 260.0) no description available & (at5g47650 : 251.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 148.0) no description available & (reliability: 502.0) & (original description: Putative NUDT7, Description = Nudix hydrolase 7, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold2142_217412-228268' '(at3g46200 : 311.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold2206_253507-261332' '(at3g46200 : 275.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold3159_106173-112284' '(at3g12600 : 223.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 129.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 446.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold3202_100281-106935' '(at3g12600 : 204.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 119.0) no description available & (gnl|cdd|72903 : 107.0) no description available & (reliability: 408.0) & (original description: Putative NUDT4, Description = Nudix hydrolase-like protein, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00001673ctg013_5058-10499' '(at4g11980 : 261.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 128.0) no description available & (gnl|cdd|72882 : 89.1) no description available & (reliability: 522.0) & (original description: Putative ASPP, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00001981ctg001_13669-19832' '(at4g25434 : 327.0) nudix hydrolase homolog 10 (NUDT10); FUNCTIONS IN: ADP-ribose diphosphatase activity, NAD or NADH binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35867 : 295.0) no description available & (gnl|cdd|72906 : 159.0) no description available & (reliability: 654.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00005429ctg010_1-2697' '(at5g47240 : 234.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 179.0) no description available & (reliability: 468.0) & (original description: Putative BnaC08g47780D, Description = BnaC08g47780D protein, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00011898ctg004_5237-8919' '(at2g01670 : 179.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 151.0) no description available & (gnl|cdd|72903 : 137.0) no description available & (reliability: 358.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00035354ctg002_9587-12562' '(gnl|cdd|35867 : 207.0) no description available & (at5g47650 : 177.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 161.0) no description available & (reliability: 354.0) & (original description: Putative NUDX2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00047825ctg002_4350-10927' '(at4g11980 : 318.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 148.0) no description available & (gnl|cdd|72882 : 102.0) no description available & (reliability: 636.0) & (original description: Putative ASPP, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101ctg16366_1-10540' '(at3g46200 : 349.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00268_385683-391218' '(at5g47650 : 319.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 293.0) no description available & (gnl|cdd|72906 : 182.0) no description available & (reliability: 638.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00481_261426-267892' '(at3g12600 : 212.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 125.0) no description available & (gnl|cdd|72903 : 112.0) no description available & (reliability: 424.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00542_186221-191176' '(at2g01670 : 192.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 142.0) no description available & (gnl|cdd|72903 : 113.0) no description available & (reliability: 384.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00940_38233-51739' '(at3g46200 : 112.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01308_295244-299317' '(at1g28960 : 256.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 176.0) no description available & (gnl|cdd|72884 : 164.0) no description available & (reliability: 512.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01535_150612-156372' '(at5g47650 : 330.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 294.0) no description available & (gnl|cdd|72906 : 174.0) no description available & (reliability: 660.0) & (original description: Putative NUDT10, Description = Nudix hydrolase 10, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01596_175808-179795' '(at2g01670 : 189.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 136.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 378.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01688_315145-352468' '(at1g79690 : 1055.0) nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72927 : 170.0) no description available & (reliability: 2110.0) & (original description: Putative NUDT3, Description = Nudix hydrolase 3, PFAM = PF00293;PF03571)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01695_223794-237239' '(at5g47650 : 355.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 314.0) no description available & (gnl|cdd|72906 : 192.0) no description available & (reliability: 710.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01771_47110-52855' '(at5g47240 : 392.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 295.0) no description available & (gnl|cdd|72906 : 185.0) no description available & (reliability: 784.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01911_486440-496864' '(at5g20070 : 569.0) nudix hydrolase homolog 19 (NUDX19); FUNCTIONS IN: hydrolase activity, metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc ribbon, NADH pyrophosphatase (InterPro:IPR015376), NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NADH pyrophosphatase-like, N-terminal (InterPro:IPR015375), NUDIX hydrolase domain (InterPro:IPR000086); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38294 : 275.0) no description available & (gnl|cdd|32645 : 207.0) no description available & (reliability: 1138.0) & (original description: Putative npy1, Description = NADH pyrophosphatase, PFAM = PF09297;PF09296;PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02275_186319-192619' '(at3g12600 : 214.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 123.0) no description available & (gnl|cdd|72903 : 109.0) no description available & (reliability: 428.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02329_39188-50041' '(at3g46200 : 353.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02329_42216-50060' '(at3g46200 : 291.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02793_2097774-2121877' '(at2g42070 : 303.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 180.0) no description available & (gnl|cdd|38294 : 163.0) no description available & (reliability: 606.0) & (original description: Putative NUDT23, Description = Nudix hydrolase 23, chloroplastic, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf03202_973694-980561' '(at1g28960 : 217.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72884 : 158.0) no description available & (gnl|cdd|38279 : 155.0) no description available & (reliability: 434.0) & (original description: Putative NUDT11, Description = Nudix hydrolase 11, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04198_576187-600177' '(at3g12600 : 217.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 132.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 434.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04847_59530-64963' '(at5g47650 : 335.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 314.0) no description available & (gnl|cdd|72906 : 178.0) no description available & (reliability: 670.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04911_47176-50479' '(at2g01670 : 183.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 143.0) no description available & (gnl|cdd|72903 : 127.0) no description available & (reliability: 366.0) & (original description: Putative NUDT21, Description = Nudix hydrolase 21, chloroplastic, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf05251_153430-156917' '(at2g01670 : 176.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 148.0) no description available & (gnl|cdd|72903 : 133.0) no description available & (reliability: 352.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf06912_206080-212631' '(at4g11980 : 380.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 160.0) no description available & (gnl|cdd|72882 : 103.0) no description available & (reliability: 760.0) & (original description: Putative NUDT14, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf07121_11175-45333' '(at2g42070 : 344.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 204.0) no description available & (gnl|cdd|38294 : 177.0) no description available & (reliability: 688.0) & (original description: Putative nudC, Description = NADH pyrophosphatase, PFAM = PF14803;PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf07402_354564-360787' '(at1g14860 : 196.0) nudix hydrolase homolog 18 (NUDT18); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 17 (TAIR:AT2G01670.1); Has 1011 Blast hits to 1010 proteins in 304 species: Archae - 0; Bacteria - 339; Metazoa - 213; Fungi - 121; Plants - 237; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38050 : 142.0) no description available & (gnl|cdd|72903 : 115.0) no description available & (reliability: 392.0) & (original description: Putative BnaC02g22250D, Description = BnaC02g22250D protein, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf08370_82687-87519' '(at5g47650 : 340.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 294.0) no description available & (gnl|cdd|72906 : 178.0) no description available & (reliability: 680.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf08804_283028-286341' '(at2g01670 : 184.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 141.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 368.0) & (original description: Putative NUDT4, Description = Nudix hydrolase-like protein, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf10635_57238-60276' '(at2g01670 : 195.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 148.0) no description available & (gnl|cdd|72903 : 123.0) no description available & (reliability: 390.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf11383_249854-252936' '(at5g19460 : 417.0) nudix hydrolase homolog 20 (NUDT20); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 24 (TAIR:AT5G19470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72896 : 222.0) no description available & (gnl|cdd|39514 : 171.0) no description available & (reliability: 834.0) & (original description: Putative NUDT20, Description = Nudix hydrolase 20, chloroplastic, PFAM = PF15916;PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf12431_123393-129090' '(gnl|cdd|35867 : 281.0) no description available & (at5g47650 : 276.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 171.0) no description available & (reliability: 552.0) & (original description: Putative NUDT7, Description = Nudix hydrolase 7, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf14115_24962-32286' '(at5g47240 : 342.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 270.0) no description available & (gnl|cdd|72906 : 157.0) no description available & (reliability: 684.0) & (original description: Putative NUDT8, Description = Nudix hydrolase 8, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf14115_27325-30326' '(at5g47240 : 144.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 136.0) no description available & (reliability: 288.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = )' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf16068_21762-26854' '(at1g68760 : 184.0) Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway.; nudix hydrolase 1 (NUDX1); FUNCTIONS IN: hydrolase activity, dihydroneopterin triphosphate pyrophosphohydrolase activity, 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity; INVOLVED IN: response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 6319 Blast hits to 6317 proteins in 1575 species: Archae - 191; Bacteria - 5327; Metazoa - 193; Fungi - 66; Plants - 51; Viruses - 14; Other Eukaryotes - 477 (source: NCBI BLink). & (gnl|cdd|72913 : 167.0) no description available & (reliability: 368.0) & (original description: Putative NUDT1, Description = Nudix hydrolase 1, PFAM = PF00293)' T
'23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf16898_173802-180911' '(at1g28960 : 236.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 174.0) no description available & (gnl|cdd|72884 : 164.0) no description available & (reliability: 472.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T
'23.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases' '' ''
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'nbv0.3scaffold10256_28659-37953' '(at5g35170 : 800.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (p43188|kadc_maize : 263.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|30189 : 206.0) no description available & (gnl|cdd|38288 : 197.0) no description available & (reliability: 1600.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406;PF09353)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'nbv0.5scaffold1507_159634-171670' '(at2g37250 : 337.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 330.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (gnl|cdd|30189 : 190.0) no description available & (gnl|cdd|38288 : 187.0) no description available & (reliability: 674.0) & (original description: Putative ADK, Description = Adenylate kinase 1, chloroplastic, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben044scf00059211ctg001_1-6205' '(q08480|kad2_orysa : 417.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 398.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 283.0) no description available & (gnl|cdd|38288 : 267.0) no description available & (reliability: 796.0) & (original description: Putative adk, Description = ATP:AMP phosphotransferase, PFAM = PF05191;PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf01905_70540-80766' '(at5g35170 : 802.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (p43188|kadc_maize : 268.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|80603 : 217.0) no description available & (gnl|cdd|38288 : 200.0) no description available & (reliability: 1604.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF09353;PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf02227_217111-221933' '(q8hsw1|kadc_soltu : 469.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (at2g37250 : 388.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (gnl|cdd|38288 : 199.0) no description available & (gnl|cdd|30189 : 199.0) no description available & (reliability: 776.0) & (original description: Putative ADK, Description = Adenylate kinase, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf04506_313152-322574' '(q08480|kad2_orysa : 384.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 361.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|84753 : 277.0) no description available & (gnl|cdd|38288 : 259.0) no description available & (reliability: 722.0) & (original description: Putative adk4, Description = Adenylate kinase, PFAM = PF05191;PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05009_615263-627723' '(at2g37250 : 337.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 329.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (gnl|cdd|30189 : 189.0) no description available & (gnl|cdd|38288 : 187.0) no description available & (reliability: 674.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05102_502174-513411' '(at5g47840 : 312.0) adenosine monophosphate kinase (AMK2); FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase family protein (TAIR:AT5G35170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43188|kadc_maize : 288.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|84753 : 228.0) no description available & (gnl|cdd|38288 : 222.0) no description available & (reliability: 624.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05342_264493-273513' '(q08480|kad2_orysa : 386.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 363.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|84753 : 280.0) no description available & (gnl|cdd|38288 : 262.0) no description available & (reliability: 726.0) & (original description: Putative adk, Description = ATP:AMP phosphotransferase, PFAM = PF00406;PF05191)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf07298_1877-8817' '(q8hsw1|kadc_soltu : 476.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (at2g37250 : 389.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (gnl|cdd|38288 : 199.0) no description available & (gnl|cdd|30189 : 198.0) no description available & (reliability: 778.0) & (original description: Putative ADK, Description = Adenylate kinase, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf08621_509952-520228' '(at5g47840 : 310.0) adenosine monophosphate kinase (AMK2); FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase family protein (TAIR:AT5G35170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43188|kadc_maize : 286.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|80603 : 231.0) no description available & (gnl|cdd|38288 : 228.0) no description available & (reliability: 620.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf19230_261376-267337' '(q08480|kad2_orysa : 419.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 394.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 282.0) no description available & (gnl|cdd|38288 : 266.0) no description available & (reliability: 788.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF05191;PF00406)' T
'23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf29888_51907-58993' '(q08480|kad2_orysa : 411.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 390.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 274.0) no description available & (gnl|cdd|38288 : 258.0) no description available & (reliability: 780.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406;PF05191)' T
'23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf01795_2108834-2111736' '(at3g06200 : 304.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: guanylate kinase activity; INVOLVED IN: purine nucleotide metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 9322 Blast hits to 9318 proteins in 2721 species: Archae - 1; Bacteria - 5493; Metazoa - 1233; Fungi - 169; Plants - 119; Viruses - 7; Other Eukaryotes - 2300 (source: NCBI BLink). & (gnl|cdd|80613 : 203.0) no description available & (gnl|cdd|35926 : 159.0) no description available & (reliability: 608.0) & (original description: Putative GK3, Description = Guanylate kinase 3, chloroplastic, PFAM = PF00625)' T
'23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf02904_287586-292983' '(at3g57550 : 457.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35926 : 229.0) no description available & (gnl|cdd|80613 : 223.0) no description available & (reliability: 914.0) & (original description: Putative gmkA, Description = Guanylate kinase, PFAM = PF00625)' T
'23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf03987_234813-240169' '(at3g57550 : 460.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35926 : 234.0) no description available & (gnl|cdd|80613 : 232.0) no description available & (reliability: 920.0) & (original description: Putative gmkA, Description = Guanylate kinase, PFAM = PF00625)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold18117_25535-35878' '(at5g26667 : 266.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 237.0) no description available & (gnl|cdd|30189 : 186.0) no description available & (p43188|kadc_maize : 94.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 532.0) & (original description: Putative UMK3, Description = UMP-CMP kinase 3, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold29261_17807-25680' '(at3g10030 : 540.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 308.0) no description available & (reliability: 1080.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696;PF13837)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold101690_1-3832' '(at4g25280 : 167.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 134.0) no description available & (gnl|cdd|84753 : 114.0) no description available & (p43188|kadc_maize : 81.6) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 334.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.5scaffold3090_234795-242608' '(at3g10030 : 538.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 296.0) no description available & (reliability: 1076.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696;PF13837)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben044scf00018967ctg009_2653-7233' '(at5g26667 : 325.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 249.0) no description available & (gnl|cdd|30189 : 188.0) no description available & (p43188|kadc_maize : 95.5) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 650.0) & (original description: Putative UMK3, Description = UMP-CMP kinase 3, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben044scf00055038ctg003_9529-16573' '(at3g10030 : 546.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 301.0) no description available & (reliability: 1092.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF13837;PF00696)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf00218_391768-397355' '(at5g26667 : 256.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 233.0) no description available & (gnl|cdd|30189 : 184.0) no description available & (p43188|kadc_maize : 93.6) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 512.0) & (original description: Putative pyrk, Description = UMP-CMP kinase, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf02494_208459-217761' '(at4g25280 : 251.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 213.0) no description available & (gnl|cdd|30189 : 166.0) no description available & (p43188|kadc_maize : 92.8) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 502.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf05030_85103-90627' '(at4g25280 : 269.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 224.0) no description available & (gnl|cdd|30189 : 176.0) no description available & (p43188|kadc_maize : 100.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 538.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T
'23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf12160_192901-203105' '(at3g18680 : 452.0) Amino acid kinase family protein; FUNCTIONS IN: uridylate kinase activity, UMP kinase activity; INVOLVED IN: cellular amino acid biosynthetic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Uridylate kinase, bacteria (InterPro:IPR015963); BEST Arabidopsis thaliana protein match is: aspartate/glutamate/uridylate kinase family protein (TAIR:AT3G10030.1); Has 10647 Blast hits to 10647 proteins in 2814 species: Archae - 356; Bacteria - 8071; Metazoa - 2; Fungi - 40; Plants - 182; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|58620 : 390.0) no description available & (reliability: 904.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696)' T
'23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'nbv0.5scaffold1769_74296-78788' '(at5g59440 : 231.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 214.0) no description available & (gnl|cdd|85916 : 119.0) no description available & (reliability: 462.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T
'23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'niben101scf00159_800399-814802' '(at5g59440 : 282.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 256.0) no description available & (gnl|cdd|85916 : 152.0) no description available & (reliability: 564.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T
'23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'niben101scf01943_1054819-1060296' '(at5g59440 : 285.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 258.0) no description available & (gnl|cdd|85916 : 154.0) no description available & (reliability: 570.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.3scaffold34491_8889-12238' '(q56e62|ndk1_tobac : 275.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 246.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 218.0) no description available & (gnl|cdd|36106 : 182.0) no description available & (reliability: 492.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.3scaffold86622_1-3875' '(q852s5|ndk2_tobac : 295.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 260.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 228.0) no description available & (gnl|cdd|36106 : 196.0) no description available & (reliability: 520.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.5scaffold2618_304019-315343' '(at1g17410 : 207.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1). & (gnl|cdd|58532 : 170.0) no description available & (gnl|cdd|36106 : 147.0) no description available & (o81372|ndk1_mescr : 93.2) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 414.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf00324_209635-215048' '(q8rxa8|ndk4_spiol : 363.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (at4g23900 : 354.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, zinc ion binding, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein (TAIR:AT4G23895.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58528 : 222.0) no description available & (gnl|cdd|36106 : 213.0) no description available & (reliability: 708.0) & (original description: Putative NDK4, Description = Nucleoside diphosphate kinase 4, chloroplastic, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf00797_2171216-2178496' '(at1g17410 : 209.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1). & (gnl|cdd|58532 : 173.0) no description available & (gnl|cdd|36106 : 153.0) no description available & (q852s5|ndk2_tobac : 93.2) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (reliability: 418.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02386_262447-267715' '(q9m7p6|ndk_capan : 276.0) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP kinase) - Capsicum annuum (Bell pepper) & (at4g09320 : 249.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 228.0) no description available & (gnl|cdd|36106 : 195.0) no description available & (reliability: 498.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02407_446475-449918' '(q56e62|ndk1_tobac : 289.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 261.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 232.0) no description available & (gnl|cdd|36106 : 198.0) no description available & (reliability: 522.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02471_139060-143592' '(q56e62|ndk1_tobac : 263.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 240.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58528 : 230.0) no description available & (gnl|cdd|36106 : 194.0) no description available & (reliability: 480.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf03850_214616-219503' '(at4g23900 : 347.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, zinc ion binding, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein (TAIR:AT4G23895.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8rxa8|ndk4_spiol : 338.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (gnl|cdd|58528 : 219.0) no description available & (gnl|cdd|36106 : 210.0) no description available & (reliability: 694.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf04328_27644-33307' '(q852s5|ndk2_tobac : 358.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 267.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 235.0) no description available & (gnl|cdd|36106 : 195.0) no description available & (reliability: 534.0) & (original description: Putative NDPK2, Description = Nucleoside diphosphate kinase 2, chloroplastic, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf07201_250441-262446' '(q852s5|ndk2_tobac : 333.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 279.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 230.0) no description available & (gnl|cdd|36106 : 193.0) no description available & (reliability: 558.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T
'23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf15120_47476-53395' '(q852s5|ndk2_tobac : 380.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 281.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 240.0) no description available & (gnl|cdd|36106 : 198.0) no description available & (reliability: 562.0) & (original description: Putative NDPK2, Description = Nucleoside diphosphate kinase 2, chloroplastic, PFAM = PF00334)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'nbv0.3scaffold21072_4667-10029' '(o22537|ipyr_orysa : 350.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Oryza sativa (Rice) & (at3g53620 : 341.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36839 : 260.0) no description available & (gnl|cdd|29533 : 215.0) no description available & (reliability: 682.0) & (original description: Putative IPP, Description = Soluble inorganic pyrophosphatase, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'nbv0.5scaffold3294_22637-36352' '(at5g09650 : 454.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (q93y52|ipyr1_chlre : 308.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|36839 : 304.0) no description available & (gnl|cdd|29533 : 179.0) no description available & (reliability: 908.0) & (original description: Putative PPA6, Description = Soluble inorganic pyrophosphatase 6, chloroplastic, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00010297ctg006_566-5040' '(at3g53620 : 369.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (q43187|ipyr_soltu : 342.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (gnl|cdd|36839 : 271.0) no description available & (gnl|cdd|29533 : 222.0) no description available & (reliability: 738.0) & (original description: Putative PPA4, Description = Soluble inorganic pyrophosphatase 4, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00013336ctg015_2854-6532' '(at4g29680 : 622.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 433.0) no description available & (gnl|cdd|85601 : 310.0) no description available & (reliability: 1244.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00043121ctg001_487-8102' '(at1g26640 : 237.0) Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|58607 : 118.0) no description available & (reliability: 474.0) & (original description: Putative 288, Description = Amino acid kinase family protein, PFAM = PF00696)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00193_1351-12735' '(at1g26640 : 440.0) Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|58607 : 222.0) no description available & (reliability: 880.0) & (original description: Putative 288, Description = Putative uncharacterized protein 288, PFAM = PF00696)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00297_42565-47700' '(at5g09650 : 445.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (gnl|cdd|36839 : 307.0) no description available & (q93y52|ipyr1_chlre : 302.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|29533 : 178.0) no description available & (reliability: 890.0) & (original description: Putative PPA6, Description = Soluble inorganic pyrophosphatase 6, chloroplastic, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00582_220468-225847' '(at1g01050 : 350.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (q43187|ipyr_soltu : 335.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (gnl|cdd|36839 : 260.0) no description available & (gnl|cdd|29533 : 225.0) no description available & (reliability: 700.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00606_281466-287125' '(o22537|ipyr_orysa : 350.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Oryza sativa (Rice) & (at3g53620 : 343.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36839 : 262.0) no description available & (gnl|cdd|29533 : 218.0) no description available & (reliability: 686.0) & (original description: Putative IPP, Description = Soluble inorganic pyrophosphatase, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf01349_290558-293598' '(gnl|cdd|58616 : 406.0) no description available & (at3g57560 : 395.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (gnl|cdd|37647 : 242.0) no description available & (reliability: 790.0) & (original description: Putative NAGK, Description = Acetylglutamate kinase, chloroplastic, PFAM = PF00696)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf01633_60733-64217' '(at4g29680 : 627.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 431.0) no description available & (gnl|cdd|85601 : 308.0) no description available & (reliability: 1254.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07036_286618-290367' '(q43187|ipyr_soltu : 376.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 357.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 272.0) no description available & (gnl|cdd|29533 : 229.0) no description available & (reliability: 714.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07229_47646-51206' '(at4g29680 : 641.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 437.0) no description available & (gnl|cdd|85601 : 317.0) no description available & (reliability: 1282.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07365_108829-114075' '(at5g09650 : 446.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (gnl|cdd|36839 : 307.0) no description available & (q93y52|ipyr1_chlre : 303.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|29533 : 179.0) no description available & (reliability: 892.0) & (original description: Putative PPA1, Description = Inorganic pyrophosphatase, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07554_484-5266' '(q43187|ipyr_soltu : 383.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 372.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 273.0) no description available & (gnl|cdd|29533 : 226.0) no description available & (reliability: 744.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T
'23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf15792_103109-106841' '(q43187|ipyr_soltu : 388.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 368.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 274.0) no description available & (gnl|cdd|29533 : 226.0) no description available & (reliability: 736.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T
'23.5' 'nucleotide metabolism.deoxynucleotide metabolism' '' ''
'23.5.1' 'nucleotide metabolism.deoxynucleotide metabolism.dihydrofolate reductase-thymidylate synthase' 'nbv0.5scaffold704_196690-203944' '(p51820|drts_soybn : 848.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Glycine max (Soybean) & (at2g16370 : 825.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 545.0) no description available & (gnl|cdd|84679 : 500.0) no description available & (reliability: 1606.0) & (original description: Putative tyms, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00186;PF00303)' T
'23.5.1' 'nucleotide metabolism.deoxynucleotide metabolism.dihydrofolate reductase-thymidylate synthase' 'niben101scf00893_178370-183440' '(p45350|drts_dauca : 872.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Daucus carota (Carrot) & (at2g16370 : 841.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 546.0) no description available & (gnl|cdd|84679 : 502.0) no description available & (reliability: 1650.0) & (original description: Putative ts, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00303;PF00186)' T
'23.5.2' 'nucleotide metabolism.deoxynucleotide metabolism.pseudouridine synthase' 'niben044scf00050083ctg001_5253-13315' '(at5g14460 : 590.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 284.0) no description available & (gnl|cdd|37740 : 152.0) no description available & (reliability: 1180.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF01509;PF16198)' T
'23.5.2' 'nucleotide metabolism.deoxynucleotide metabolism.pseudouridine synthase' 'niben101scf00046_442824-451482' '(at5g14460 : 582.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 285.0) no description available & (gnl|cdd|37740 : 157.0) no description available & (reliability: 1164.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF16198;PF01509)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.3scaffold10675_14850-29050' '(at3g47390 : 847.0) Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.; PHOTOSENSITIVE 1 (PHS1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02464 (InterPro:IPR012816), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin-specific deaminase, C-terminal (InterPro:IPR011549), Bacterial bifunctional deaminase-reductase, C-terminal (InterPro:IPR002734), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G20960.1). & (gnl|cdd|32168 : 188.0) no description available & (reliability: 1694.0) & (original description: Putative PYRR, Description = Riboflavin biosynthesis protein PYRR, chloroplastic, PFAM = PF08719;PF00383;PF01872)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.5scaffold469_191885-199409' '(at5g24670 : 399.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 116.0) no description available & (reliability: 798.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.5scaffold3446_121036-129198' '(at1g48175 : 221.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (gnl|cdd|36236 : 126.0) no description available & (gnl|cdd|30935 : 126.0) no description available & (reliability: 442.0) & (original description: Putative DEADC1, Description = tRNA-specific adenosine deaminase 2, PFAM = PF00383)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf00975_133614-140301' '(at1g48175 : 197.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (gnl|cdd|36236 : 112.0) no description available & (gnl|cdd|30935 : 103.0) no description available & (reliability: 394.0) & (original description: Putative adat2, Description = tRNA-specific adenosine deaminase 2, PFAM = PF00383)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf01514_431726-447084' '(at3g47390 : 816.0) Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.; PHOTOSENSITIVE 1 (PHS1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02464 (InterPro:IPR012816), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin-specific deaminase, C-terminal (InterPro:IPR011549), Bacterial bifunctional deaminase-reductase, C-terminal (InterPro:IPR002734), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G20960.1). & (gnl|cdd|32168 : 188.0) no description available & (reliability: 1632.0) & (original description: Putative PYRR, Description = Riboflavin biosynthesis protein PYRR, chloroplastic, PFAM = PF00383;PF01872;PF08719)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf01968_132142-137615' '(at4g20960 : 395.0) encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis; Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30466 : 228.0) no description available & (reliability: 790.0) & (original description: Putative ribD, Description = Riboflavin biosynthesis protein RibD, PFAM = PF00383;PF01872)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf03949_799484-811978' '(at5g24670 : 384.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 108.0) no description available & (reliability: 768.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T
'23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf06154_129726-137276' '(at5g24670 : 392.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 116.0) no description available & (reliability: 784.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T
'23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben044scf00059850ctg000_1-2061' '(p49730|rir2_tobac : 667.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 562.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (gnl|cdd|36780 : 540.0) no description available & (gnl|cdd|64148 : 365.0) no description available & (reliability: 1124.0) & (original description: Putative nrdB, Description = Ribonucleoside-diphosphate reductase subunit M2, PFAM = PF00268)' T
'23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf00109_1034481-1037036' '(p49730|rir2_tobac : 669.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 565.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (gnl|cdd|36780 : 540.0) no description available & (gnl|cdd|64148 : 364.0) no description available & (reliability: 1130.0) & (original description: Putative nrdB, Description = Ribonucleoside-diphosphate reductase subunit M2, PFAM = PF00268)' T
'23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf02242_134826-143866' '(at2g21790 : 1466.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (gnl|cdd|36328 : 1427.0) no description available & (gnl|cdd|86154 : 755.0) no description available & (reliability: 2932.0) & (original description: Putative RNR1, Description = Ribonucleoside-diphosphate reductase large subunit, PFAM = PF00317;PF03477;PF02867)' T
'23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf10438_147793-155174' '(at2g21790 : 1442.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (gnl|cdd|36328 : 1427.0) no description available & (gnl|cdd|86154 : 764.0) no description available & (reliability: 2884.0) & (original description: Putative RNR1, Description = Ribonucleoside-diphosphate reductase large subunit, PFAM = PF03477;PF00317;PF02867)' T
'23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf00369_2157356-2160201' '(at3g46940 : 244.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 194.0) no description available & (gnl|cdd|31099 : 159.0) no description available & (reliability: 488.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T
'23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf00652_175962-178817' '(at3g46940 : 239.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 189.0) no description available & (gnl|cdd|31099 : 154.0) no description available & (reliability: 478.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T
'23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf11383_2304-5662' '(at3g46940 : 239.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 196.0) no description available & (gnl|cdd|31099 : 159.0) no description available & (reliability: 478.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T
'23.5.6' 'nucleotide metabolism.deoxynucleotide metabolism.uridylyl transferase' '' ''
'23.6' 'nucleotide metabolism.signalling' '' ''
'24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold323_26430-30082' '(at1g75620 : 652.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1304.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold10282_26968-30638' '(at1g75620 : 642.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 365.0) no description available & (reliability: 1284.0) & (original description: Putative BnaC09g38100D, Description = BnaC09g38100D protein, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold15883_10663-14402' '(at1g14430 : 610.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 336.0) no description available & (reliability: 1220.0) & (original description: Putative BnaC08g39640D, Description = BnaC08g39640D protein, PFAM = PF07250;PF09118)' T
'24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold39534_88-3092' '(gnl|cdd|36728 : 218.0) no description available & (at5g16080 : 193.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 174.0) no description available & (q6l545|gid1_orysa : 125.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 386.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'nbv0.5scaffold25_30947-33977' '(gnl|cdd|36728 : 220.0) no description available & (at5g16080 : 191.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 181.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'nbv0.5scaffold2418_297477-318437' '(gnl|cdd|36728 : 236.0) no description available & (at5g16080 : 206.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 173.0) no description available & (q6l545|gid1_orysa : 118.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben044scf00000729ctg007_6777-9781' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 190.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: Putative hsr203J, Description = HSR203J, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben044scf00003177ctg004_72011-76411' '(at1g14430 : 621.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 351.0) no description available & (reliability: 1242.0) & (original description: Putative BnaC08g39640D, Description = BnaC08g39640D protein, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben044scf00009749ctg004_1460-5165' '(at1g75620 : 681.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1362.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF07250;PF09118)' T
'24' 'Biodegradation of Xenobiotics' 'niben044scf00031166ctg003_1534-5056' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 194.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 129.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben044scf00035020ctg007_5403-8956' '(at1g75620 : 631.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 365.0) no description available & (reliability: 1262.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF07250;PF09118)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf00577_88450-93705' '(at1g68620 : 357.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 11100 Blast hits to 11083 proteins in 1670 species: Archae - 110; Bacteria - 6437; Metazoa - 919; Fungi - 1098; Plants - 1346; Viruses - 3; Other Eukaryotes - 1187 (source: NCBI BLink). & (gnl|cdd|36728 : 267.0) no description available & (gnl|cdd|87389 : 193.0) no description available & (q6l545|gid1_orysa : 139.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative CXE6, Description = Probable carboxylesterase 6, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf01205_371545-375341' '(at1g75620 : 661.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1322.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf01205_392782-396452' '(at1g75620 : 642.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 366.0) no description available & (reliability: 1284.0) & (original description: Putative GLOX, Description = Galactose oxidase, PFAM = PF07250;PF09118)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf01205_552960-556621' '(at1g19900 : 681.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 833 Blast hits to 830 proteins in 167 species: Archae - 0; Bacteria - 311; Metazoa - 0; Fungi - 239; Plants - 262; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|70706 : 369.0) no description available & (reliability: 1362.0) & (original description: Putative GLX1, Description = Glyoxal oxidase 1, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf01409_475068-478747' '(at3g57620 : 647.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G14430.1); Has 876 Blast hits to 857 proteins in 171 species: Archae - 0; Bacteria - 347; Metazoa - 2; Fungi - 241; Plants - 265; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|70706 : 357.0) no description available & (reliability: 1294.0) & (original description: Putative BnaCnng11720D, Description = BnaCnng11720D protein, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf01537_342320-346488' '(at1g14430 : 622.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 358.0) no description available & (reliability: 1244.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 564.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 504.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf03016_47943-55285' '(at2g03550 : 238.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 224.0) no description available & (gnl|cdd|87389 : 140.0) no description available & (q6l545|gid1_orysa : 87.4) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative ASH1, Description = Acylsugar acylhydrolase 1, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf03128_163659-167317' '(at1g75620 : 709.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 380.0) no description available & (reliability: 1418.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf03565_558165-566292' '(at5g23530 : 399.0) carboxyesterase 18 (CXE18); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 278.0) no description available & (gnl|cdd|87389 : 196.0) no description available & (q6l545|gid1_orysa : 194.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 798.0) & (original description: Putative CXE18, Description = Probable carboxylesterase 18, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf03832_279487-282054' '(gnl|cdd|36728 : 237.0) no description available & (at5g16080 : 209.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 562.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf05283_75787-78791' '(gnl|cdd|36728 : 214.0) no description available & (at5g16080 : 189.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 175.0) no description available & (q6l545|gid1_orysa : 120.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf05830_339831-342793' '(at2g03550 : 225.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 221.0) no description available & (gnl|cdd|87389 : 146.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf08127_434121-437077' '(gnl|cdd|36728 : 219.0) no description available & (at3g48690 : 217.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 119.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative HIDH, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf09372_337736-340758' '(at5g16080 : 363.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 279.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (q6l545|gid1_orysa : 127.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 726.0) & (original description: Putative CXE17, Description = Probable carboxylesterase 17, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf12148_18213-38900' '(at5g23530 : 398.0) carboxyesterase 18 (CXE18); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 270.0) no description available & (q6l545|gid1_orysa : 197.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|87389 : 191.0) no description available & (reliability: 796.0) & (original description: Putative CXE18, Description = Probable carboxylesterase 18, PFAM = PF07859)' T
'24' 'Biodegradation of Xenobiotics' 'niben101scf13545_62541-66148' '(at3g53950 : 757.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 849 Blast hits to 839 proteins in 169 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 246; Plants - 262; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|70706 : 333.0) no description available & (reliability: 1514.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'nbv0.5scaffold1096_316153-332866' '(at3g10850 : 399.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 236.0) no description available & (gnl|cdd|77675 : 143.0) no description available & (reliability: 798.0) & (original description: Putative hagh, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00001379ctg006_1891-8960' '(at3g10850 : 314.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 199.0) no description available & (gnl|cdd|77675 : 117.0) no description available & (reliability: 628.0) & (original description: Putative gloB, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00011949ctg000_5130-11424' '(at1g53580 : 396.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 358.0) no description available & (gnl|cdd|30837 : 101.0) no description available & (reliability: 792.0) & (original description: Putative blh, Description = Zn-dependent hydrolase, PFAM = PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00024807ctg006_1-4492' '(at1g06130 : 308.0) glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, hydroxyacylglutathione hydrolase activity, zinc ion binding; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.2); Has 15453 Blast hits to 15452 proteins in 2500 species: Archae - 395; Bacteria - 9967; Metazoa - 477; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink). & (gnl|cdd|36031 : 213.0) no description available & (gnl|cdd|77675 : 145.0) no description available & (reliability: 616.0) & (original description: Putative gloB, Description = Glyoxalase II, PFAM = PF16123;PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00031611ctg001_2080-8281' '(at1g53580 : 415.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 371.0) no description available & (gnl|cdd|30837 : 101.0) no description available & (reliability: 830.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf00438_271425-279169' '(at1g06130 : 469.0) glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, hydroxyacylglutathione hydrolase activity, zinc ion binding; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.2); Has 15453 Blast hits to 15452 proteins in 2500 species: Archae - 395; Bacteria - 9967; Metazoa - 477; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink). & (gnl|cdd|36031 : 293.0) no description available & (gnl|cdd|77675 : 194.0) no description available & (reliability: 938.0) & (original description: Putative gloB, Description = Glyoxalase II, PFAM = PF16123;PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf00860_43787-61430' '(at3g10850 : 429.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 262.0) no description available & (gnl|cdd|77675 : 156.0) no description available & (reliability: 858.0) & (original description: Putative gloB, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF00753;PF16123)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf03679_114322-134007' '(at3g10850 : 384.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 226.0) no description available & (gnl|cdd|77675 : 132.0) no description available & (reliability: 768.0) & (original description: Putative hagh, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf04945_213209-244907' '(at1g53580 : 390.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 348.0) no description available & (gnl|cdd|30837 : 84.5) no description available & (reliability: 780.0) & (original description: Putative Ethe1, Description = Persulfide dioxygenase ETHE1, mitochondrial, PFAM = PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf05575_403478-409772' '(at1g53580 : 418.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 380.0) no description available & (gnl|cdd|30837 : 103.0) no description available & (reliability: 836.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T
'24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf34135_5212-11814' '(at1g53580 : 406.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 368.0) no description available & (gnl|cdd|30837 : 109.0) no description available & (reliability: 812.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.3scaffold62328_8302-11154' '(at1g80160 : 181.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.3scaffold70746_2840-5972' '(at1g80160 : 169.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.5scaffold2437_395179-397965' '(at1g80160 : 182.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00000014ctg028_2098-7481' '(at1g64185 : 187.0) Lactoylglutathione lyase / glyoxalase I family protein; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT5G41650.1); Has 78 Blast hits to 78 proteins in 36 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative LOC100281531, Description = Glyoxalase/bleomycin resistance protein/dioxygenase, PFAM = )' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00000955ctg007_45212-47104' '(at1g67280 : 212.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 165.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 131.0) no description available & (gnl|cdd|77707 : 87.4) no description available & (reliability: 424.0) & (original description: Putative aspS, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00005202ctg000_3262-6582' '(at1g80160 : 168.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00199_251315-254608' '(at2g28420 : 244.0) Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1054 Blast hits to 1054 proteins in 326 species: Archae - 2; Bacteria - 538; Metazoa - 105; Fungi - 6; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative At2g28420, Description = Expressed protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00328_468278-478775' '(at2g32090 : 185.0) Lactoylglutathione lyase / glyoxalase I family protein; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT2G28420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 83.9) no description available & (reliability: 370.0) & (original description: Putative At2g32090, Description = Lactoylglutathione lyase / glyoxalase I family protein, PFAM = PF13669)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00472_968624-971641' '(at1g80160 : 186.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00472_968796-971575' '(at1g80160 : 186.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00611_944507-951045' '(at5g57040 : 249.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative THIOKS190049, Description = Glyoxalase/bleomycin resistance protein/dioxygenase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00739_387316-391698' '(at1g80160 : 239.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf01693_156962-164179' '(o49818|lgul_cicar : 321.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 298.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 229.0) no description available & (gnl|cdd|77707 : 102.0) no description available & (reliability: 596.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf01962_164960-171998' '(at1g67280 : 537.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 424.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 355.0) no description available & (gnl|cdd|77707 : 163.0) no description available & (reliability: 1074.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf03224_1240924-1245245' '(at1g80160 : 268.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf04334_31938-36447' '(at1g80160 : 160.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf04560_765453-771333' '(o49818|lgul_cicar : 303.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 284.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 227.0) no description available & (gnl|cdd|77707 : 103.0) no description available & (reliability: 568.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05438_264656-274785' '(at1g11840 : 253.0) Encodes a glyoxalase I homolog ATGLX1.; glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1). & (q948t6|lgul_orysa : 247.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 181.0) no description available & (gnl|cdd|77707 : 119.0) no description available & (reliability: 506.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05506_403137-405938' '(at1g07645 : 206.0) dessication-induced 1VOC superfamily protein (DSI-1VOC); FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative F24B9.26, Description = Dessication-induced 1VOC-like protein, PFAM = PF12681)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05895_305744-308865' '(at1g80160 : 159.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400003626, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf07829_97759-100665' '(at1g80160 : 265.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf08991_61185-73050' '(at1g11840 : 483.0) Encodes a glyoxalase I homolog ATGLX1.; glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1). & (q948t6|lgul_orysa : 465.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 348.0) no description available & (gnl|cdd|77707 : 158.0) no description available & (reliability: 966.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf14312_63846-75043' '(at5g57040 : 250.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative lactoylglutathio, Description = Lactoylglutathione lyase family protein / glyoxalase I family protein, PFAM = PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf15109_53089-60441' '(at1g67280 : 449.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 387.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 327.0) no description available & (gnl|cdd|77707 : 128.0) no description available & (reliability: 898.0) & (original description: Putative glo1, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T
'24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf20283_127056-194234' '(at1g80160 : 168.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T
'24.3' 'Biodegradation of Xenobiotics.3-hydroxybutyryl-CoA dehydrogenase' 'niben101scf01175_1-8192' '(at3g15290 : 450.0) 3-hydroxyacyl-CoA dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase (InterPro:IPR022694); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 14531 Blast hits to 13544 proteins in 1840 species: Archae - 475; Bacteria - 9128; Metazoa - 588; Fungi - 237; Plants - 152; Viruses - 0; Other Eukaryotes - 3951 (source: NCBI BLink). & (gnl|cdd|82260 : 377.0) no description available & (gnl|cdd|37515 : 365.0) no description available & (q8w1l6|mfp_orysa : 136.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (reliability: 900.0) & (original description: Putative mmgB, Description = Putative 3-hydroxybutyryl-CoA dehydrogenase, PFAM = PF00725;PF02737)' T
'25' 'C1-metabolism' 'nbv0.3scaffold6829_3016-8690' '(at2g41530 : 229.0) Encodes a protein with S-formylglutathione hydrolase activity.; S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|38311 : 204.0) no description available & (gnl|cdd|30972 : 102.0) no description available & (reliability: 458.0) & (original description: Putative Esd, Description = S-formylglutathione hydrolase, PFAM = PF00756)' T
'25' 'C1-metabolism' 'nbv0.5scaffold133_924529-932013' '(o49954|gcsp_soltu : 1897.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1755.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1652.0) no description available & (gnl|cdd|81549 : 1565.0) no description available & (reliability: 3510.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'25' 'C1-metabolism' 'nbv0.5scaffold704_196690-203944' '(p51820|drts_soybn : 848.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Glycine max (Soybean) & (at2g16370 : 825.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 545.0) no description available & (gnl|cdd|84679 : 500.0) no description available & (reliability: 1650.0) & (original description: Putative tyms, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00186;PF00303)' T
'25' 'C1-metabolism' 'niben044scf00007101ctg007_1-8662' '(o49954|gcsp_soltu : 1903.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1756.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1660.0) no description available & (gnl|cdd|81549 : 1577.0) no description available & (reliability: 3512.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'25' 'C1-metabolism' 'niben101scf00893_178370-183440' '(p45350|drts_dauca : 872.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Daucus carota (Carrot) & (at2g16370 : 841.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 546.0) no description available & (gnl|cdd|84679 : 502.0) no description available & (reliability: 1682.0) & (original description: Putative ts, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00303;PF00186)' T
'25' 'C1-metabolism' 'niben101scf01330_194652-221181' '(at4g31120 : 990.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36040 : 767.0) no description available & (gnl|cdd|86811 : 608.0) no description available & (reliability: 1980.0) & (original description: Putative PMRT15, Description = Protein arginine N-methyltransferase 1.5, PFAM = PF05185;PF17285;PF17286)' T
'25' 'C1-metabolism' 'niben101scf03733_107606-109905' '(at5g56260 : 268.0) Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; FUNCTIONS IN: ribonuclease inhibitor activity; INVOLVED IN: regulation of RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493), Ribonuclease E inhibitor RraA (InterPro:IPR010203); BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT5G16450.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82960 : 216.0) no description available & (reliability: 536.0) & (original description: Putative ftsY, Description = 4-hydroxy-4-methyl-2-oxoglutarate aldolase, PFAM = PF03737)' T
'25' 'C1-metabolism' 'niben101scf03839_441005-451014' '(o49954|gcsp_soltu : 1943.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1792.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1685.0) no description available & (gnl|cdd|81549 : 1602.0) no description available & (reliability: 3584.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T
'25' 'C1-metabolism' 'niben101scf04052_68532-71029' '(at5g16450 : 291.0) Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; FUNCTIONS IN: ribonuclease inhibitor activity; INVOLVED IN: regulation of RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493), Ribonuclease E inhibitor RraA (InterPro:IPR010203); BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT3G02770.1); Has 3649 Blast hits to 3649 proteins in 1097 species: Archae - 92; Bacteria - 2860; Metazoa - 2; Fungi - 59; Plants - 104; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|82960 : 208.0) no description available & (reliability: 582.0) & (original description: Putative ftsY, Description = 4-hydroxy-4-methyl-2-oxoglutarate aldolase, PFAM = PF03737)' T
'25' 'C1-metabolism' 'niben101scf04411_124609-132115' '(at2g41530 : 489.0) Encodes a protein with S-formylglutathione hydrolase activity.; S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|38311 : 439.0) no description available & (gnl|cdd|30972 : 244.0) no description available & (reliability: 978.0) & (original description: Putative SFGH, Description = S-formylglutathione hydrolase, PFAM = PF00756)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben044scf00012020ctg001_1947-6866' '(at4g13930 : 854.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 819.0) no description available & (gnl|cdd|64334 : 580.0) no description available & (p34899|glym_pea : 548.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1708.0) & (original description: Putative SHM4, Description = Serine hydroxymethyltransferase 4, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben044scf00045520ctg007_1378-5883' '(gnl|cdd|37678 : 631.0) no description available & (at1g36370 : 619.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|64334 : 474.0) no description available & (p34899|glym_pea : 411.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1238.0) & (original description: Putative shmt, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf00069_1224252-1232110' '(p50433|glym_soltu : 974.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 916.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 630.0) no description available & (reliability: 1832.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf00472_485914-492589' '(at1g36370 : 784.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|37678 : 755.0) no description available & (gnl|cdd|64334 : 530.0) no description available & (p50433|glym_soltu : 482.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1568.0) & (original description: Putative SHM6, Description = Serine hydroxymethyltransferase 6, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf01048_13230-20354' '(p50433|glym_soltu : 969.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 934.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 625.0) no description available & (reliability: 1868.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf01171_339957-344758' '(at4g13930 : 856.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 822.0) no description available & (gnl|cdd|64334 : 577.0) no description available & (p34899|glym_pea : 550.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1712.0) & (original description: Putative shmt2, Description = Serine hydroxymethyltransferase 2, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf02122_330344-338372' '(at1g36370 : 780.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|37678 : 758.0) no description available & (gnl|cdd|64334 : 530.0) no description available & (p50433|glym_soltu : 483.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1560.0) & (original description: Putative SHM6, Description = Serine hydroxymethyltransferase 6, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf03624_667149-673981' '(p34899|glym_pea : 866.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (at5g26780 : 860.0) Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1.; serine hydroxymethyltransferase 2 (SHM2); FUNCTIONS IN: glycine hydroxymethyltransferase activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 11562 Blast hits to 11539 proteins in 2821 species: Archae - 258; Bacteria - 6362; Metazoa - 333; Fungi - 287; Plants - 321; Viruses - 6; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 629.0) no description available & (reliability: 1720.0) & (original description: Putative shmt, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf04539_106467-112667' '(at4g32520 : 830.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 776.0) no description available & (gnl|cdd|64334 : 602.0) no description available & (p34899|glym_pea : 565.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1660.0) & (original description: Putative for, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf04840_190938-197233' '(gnl|cdd|37678 : 742.0) no description available & (at1g36370 : 737.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|64334 : 526.0) no description available & (p50433|glym_soltu : 475.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1474.0) & (original description: Putative SHM7, Description = Serine hydroxymethyltransferase 7, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07073_208552-215679' '(p50433|glym_soltu : 966.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 935.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 832.0) no description available & (gnl|cdd|64334 : 623.0) no description available & (reliability: 1870.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07116_93796-99821' '(at4g32520 : 832.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 781.0) no description available & (gnl|cdd|64334 : 604.0) no description available & (p50433|glym_soltu : 570.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1664.0) & (original description: Putative SHM3, Description = Serine hydroxymethyltransferase 3, chloroplastic, PFAM = PF00464)' T
'25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07161_16736-21509' '(at4g13930 : 855.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 821.0) no description available & (gnl|cdd|64334 : 577.0) no description available & (p34899|glym_pea : 549.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1710.0) & (original description: Putative SHM4, Description = Serine hydroxymethyltransferase 4, PFAM = PF00464)' T
'25.2' 'C1-metabolism.formate-tetrahydrofolate ligase' 'niben101scf07182_411043-419435' '(at1g50480 : 1063.0) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete; 10-formyltetrahydrofolate synthetase (THFS); FUNCTIONS IN: formate-tetrahydrofolate ligase activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, folic acid and derivative biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Formate-tetrahydrofolate ligase, FTHFS, conserved site (InterPro:IPR020628), Formate-tetrahydrofolate ligase, FTHFS (InterPro:IPR000559); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G12280.1); Has 7211 Blast hits to 7172 proteins in 1581 species: Archae - 30; Bacteria - 3794; Metazoa - 307; Fungi - 186; Plants - 64; Viruses - 0; Other Eukaryotes - 2830 (source: NCBI BLink). & (p28723|fths_spiol : 1062.0) Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS) - Spinacia oleracea (Spinach) & (gnl|cdd|39431 : 917.0) no description available & (gnl|cdd|85351 : 849.0) no description available & (reliability: 2126.0) & (original description: Putative fhs, Description = C-1-tetrahydrofolate synthase, cytoplasmic, PFAM = PF01268)' T
'25.3' 'C1-metabolism.dihydropteridine diphosphokinase' 'niben101scf02151_485720-528121' '(at4g30000 : 678.0) Dihydropterin pyrophosphokinase / Dihydropteroate synthase; FUNCTIONS IN: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, dihydropteroate synthase activity; INVOLVED IN: pteridine and derivative metabolic process, cellular metabolic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT1G69190.1). & (gnl|cdd|37755 : 638.0) no description available & (gnl|cdd|29545 : 314.0) no description available & (reliability: 1356.0) & (original description: Putative fol1, Description = Dihydropteroate synthase, PFAM = PF01288;PF00809)' T
'25.3' 'C1-metabolism.dihydropteridine diphosphokinase' 'niben101scf02151_523991-527562' '(at4g30000 : 678.0) Dihydropterin pyrophosphokinase / Dihydropteroate synthase; FUNCTIONS IN: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, dihydropteroate synthase activity; INVOLVED IN: pteridine and derivative metabolic process, cellular metabolic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT1G69190.1). & (gnl|cdd|37755 : 638.0) no description available & (gnl|cdd|29545 : 314.0) no description available & (reliability: 1356.0) & (original description: Putative fol1, Description = Dihydropteroate synthase, PFAM = PF01288;PF00809)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'nbv0.3scaffold46237_12477-16647' '(at1g76730 : 478.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39611 : 365.0) no description available & (gnl|cdd|85693 : 115.0) no description available & (reliability: 956.0) & (original description: Putative fcl2, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'nbv0.3scaffold75175_1671-7320' '(at5g13050 : 286.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 204.0) no description available & (gnl|cdd|85693 : 125.0) no description available & (reliability: 572.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben044scf00028255ctg015_1-2711' '(at5g13050 : 124.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 100.0) no description available & (reliability: 248.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben044scf00053269ctg004_11203-16852' '(at5g13050 : 287.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 205.0) no description available & (gnl|cdd|85693 : 125.0) no description available & (reliability: 574.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf00024_55589-65667' '(at5g13050 : 291.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 211.0) no description available & (gnl|cdd|85693 : 123.0) no description available & (reliability: 582.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf00425_291244-296797' '(at5g13050 : 309.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 211.0) no description available & (gnl|cdd|30561 : 116.0) no description available & (reliability: 618.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf11884_52003-57652' '(at5g13050 : 257.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 180.0) no description available & (gnl|cdd|85693 : 113.0) no description available & (reliability: 514.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T
'25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf12033_12783-18381' '(at1g76730 : 385.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39611 : 281.0) no description available & (gnl|cdd|85693 : 88.5) no description available & (reliability: 770.0) & (original description: Putative fcl2, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.3scaffold2893_405-5150' '(at4g00620 : 498.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35312 : 403.0) no description available & (gnl|cdd|30539 : 373.0) no description available & (reliability: 996.0) & (original description: Putative FOLD4, Description = Bifunctional protein FolD 4, chloroplastic, PFAM = PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.3scaffold64854_336-5734' '(at3g12290 : 461.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|35312 : 379.0) no description available & (gnl|cdd|30539 : 371.0) no description available & (reliability: 922.0) & (original description: Putative FOLD2, Description = Bifunctional protein FolD 2, PFAM = PF00763;PF02882)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.5scaffold6392_38069-43152' '(at2g38660 : 347.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 318.0) no description available & (gnl|cdd|30539 : 310.0) no description available & (reliability: 694.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF00763;PF02882)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben044scf00006963ctg004_6631-11210' '(at2g38660 : 432.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 354.0) no description available & (gnl|cdd|30539 : 337.0) no description available & (reliability: 864.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben044scf00044059ctg000_38689-47166' '(at2g38660 : 363.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 320.0) no description available & (gnl|cdd|30539 : 313.0) no description available & (reliability: 726.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03143_1122192-1126492' '(at3g12290 : 325.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|30539 : 275.0) no description available & (gnl|cdd|39431 : 272.0) no description available & (reliability: 650.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03370_561805-566916' '(at3g12290 : 450.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|35312 : 371.0) no description available & (gnl|cdd|30539 : 360.0) no description available & (reliability: 900.0) & (original description: Putative FOLD2, Description = Bifunctional protein FolD 2, PFAM = PF00763;PF02882)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03714_315531-320737' '(at2g38660 : 418.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 344.0) no description available & (gnl|cdd|30539 : 322.0) no description available & (reliability: 836.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF02882;PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03805_6346-10811' '(at2g38660 : 169.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 155.0) no description available & (gnl|cdd|86164 : 152.0) no description available & (reliability: 338.0) & (original description: Putative folD, Description = C-1-tetrahydrofolate synthase, cytoplasmic, PFAM = PF02882)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03805_8004-23836' '(at2g38660 : 360.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 320.0) no description available & (gnl|cdd|30539 : 305.0) no description available & (reliability: 720.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T
'25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf07168_190968-195746' '(at4g00620 : 495.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35312 : 403.0) no description available & (gnl|cdd|30539 : 374.0) no description available & (reliability: 990.0) & (original description: Putative FOLD4, Description = Bifunctional protein FolD 4, chloroplastic, PFAM = PF00763;PF02882)' T
'25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'nbv0.3scaffold28955_833-9395' '(q75he6|mthr_orysa : 1071.0) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20) - Oryza sativa (Rice) & (at2g44160 : 1043.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (gnl|cdd|35784 : 843.0) no description available & (gnl|cdd|85914 : 410.0) no description available & (reliability: 2086.0) & (original description: Putative MTHFR, Description = Methylenetetrahydrofolate reductase, PFAM = PF02219)' T
'25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'niben101scf05848_394523-406573' '(q75he6|mthr_orysa : 1076.0) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20) - Oryza sativa (Rice) & (at3g59970 : 1048.0) methylenetetrahydrofolate reductase MTHFR1 mRNA, complete; methylenetetrahydrofolate reductase 1 (MTHFR1); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 2 (TAIR:AT2G44160.1); Has 4753 Blast hits to 4742 proteins in 1927 species: Archae - 14; Bacteria - 3601; Metazoa - 134; Fungi - 280; Plants - 73; Viruses - 0; Other Eukaryotes - 651 (source: NCBI BLink). & (gnl|cdd|35784 : 848.0) no description available & (gnl|cdd|85914 : 410.0) no description available & (reliability: 2096.0) & (original description: Putative met9, Description = Methylenetetrahydrofolate reductase, PFAM = PF02219)' T
'25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'niben101scf24238_20609-29754' '(q9se94|mthr1_maize : 1057.0) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20) (ZmMTHFR1) - Zea mays (Maize) & (at2g44160 : 1055.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (gnl|cdd|35784 : 848.0) no description available & (gnl|cdd|85914 : 409.0) no description available & (reliability: 2110.0) & (original description: Putative MTHFR2, Description = Methylenetetrahydrofolate reductase 2, PFAM = PF02219)' T
'25.7' 'C1-metabolism.GTP cyclohydrolase I' 'niben101scf06956_1585-5740' '(at3g07270 : 553.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37909 : 221.0) no description available & (gnl|cdd|82943 : 152.0) no description available & (reliability: 1106.0) & (original description: Putative GCH1, Description = GTP cyclohydrolase 1, PFAM = PF01227;PF01227)' T
'25.7' 'C1-metabolism.GTP cyclohydrolase I' 'niben101scf07428_230095-234682' '(at3g07270 : 550.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37909 : 216.0) no description available & (gnl|cdd|82943 : 156.0) no description available & (reliability: 1100.0) & (original description: Putative GCH1, Description = GTP cyclohydrolase 1, PFAM = PF01227;PF01227)' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold19380_1825-19689' '(at5g05980 : 677.0) DHFS-FPGS homolog B (DFB); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D (TAIR:AT3G55630.3); Has 7710 Blast hits to 7708 proteins in 2543 species: Archae - 43; Bacteria - 4850; Metazoa - 165; Fungi - 360; Plants - 132; Viruses - 0; Other Eukaryotes - 2160 (source: NCBI BLink). & (gnl|cdd|37736 : 529.0) no description available & (gnl|cdd|30633 : 266.0) no description available & (reliability: 1354.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = PF08245)' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold76218_132-7920' '(at3g10160 : 491.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 318.0) no description available & (gnl|cdd|30633 : 152.0) no description available & (reliability: 982.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold84760_1-4817' '(at3g10160 : 313.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 240.0) no description available & (gnl|cdd|30633 : 152.0) no description available & (reliability: 626.0) & (original description: Putative fpgs, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.5scaffold2901_140823-157085' '(at3g10160 : 619.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 415.0) no description available & (gnl|cdd|30633 : 197.0) no description available & (reliability: 1238.0) & (original description: Putative FPGS2, Description = Folylpolyglutamate synthase, PFAM = )' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben044scf00004562ctg015_4912-9380' '(at3g10160 : 140.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 114.0) no description available & (gnl|cdd|30633 : 101.0) no description available & (reliability: 280.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf01966_336526-346402' '(at5g41480 : 487.0) Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.; GLOBULAR ARREST1 (GLA1); FUNCTIONS IN: dihydrofolate synthase activity; INVOLVED IN: one-carbon metabolic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 8245 Blast hits to 8243 proteins in 2505 species: Archae - 47; Bacteria - 5105; Metazoa - 156; Fungi - 354; Plants - 131; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (gnl|cdd|30633 : 279.0) no description available & (gnl|cdd|37736 : 275.0) no description available & (reliability: 974.0) & (original description: Putative DHFS, Description = Dihydrofolate synthetase, PFAM = PF08245)' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf01966_340783-345633' '(at5g41480 : 301.0) Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.; GLOBULAR ARREST1 (GLA1); FUNCTIONS IN: dihydrofolate synthase activity; INVOLVED IN: one-carbon metabolic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 8245 Blast hits to 8243 proteins in 2505 species: Archae - 47; Bacteria - 5105; Metazoa - 156; Fungi - 354; Plants - 131; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (gnl|cdd|30633 : 170.0) no description available & (gnl|cdd|37736 : 146.0) no description available & (reliability: 602.0) & (original description: Putative DFA, Description = Dihydrofolate synthetase/folylpolyglutamate synthetase, putative, expressed, PFAM = PF08245)' T
'25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf05574_333770-356713' '(at5g05980 : 689.0) DHFS-FPGS homolog B (DFB); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D (TAIR:AT3G55630.3); Has 7710 Blast hits to 7708 proteins in 2543 species: Archae - 43; Bacteria - 4850; Metazoa - 165; Fungi - 360; Plants - 132; Viruses - 0; Other Eukaryotes - 2160 (source: NCBI BLink). & (gnl|cdd|37736 : 537.0) no description available & (gnl|cdd|30633 : 270.0) no description available & (reliability: 1378.0) & (original description: Putative FPGS1, Description = Folylpolyglutamate synthase, PFAM = PF08245)' T
'25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold44295_7516-11796' '(at3g11750 : 161.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 139.0) no description available & (reliability: 322.0) & (original description: Putative FOLB1, Description = Dihydroneopterin aldolase 1, PFAM = PF02152)' T
'25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold44295_9649-13357' '(at5g62980 : 88.2) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in folate biosynthesis as a homooctamer in vivo.; FOLB2; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT3G11750.1); Has 2737 Blast hits to 2737 proteins in 1212 species: Archae - 4; Bacteria - 2338; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative FOLB1, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T
'25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold78892_2106-7387' '(at3g11750 : 132.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 118.0) no description available & (reliability: 264.0) & (original description: Putative folA, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T
'25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.5scaffold1108_26065-31840' '(at3g11750 : 161.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 138.0) no description available & (reliability: 322.0) & (original description: Putative FOLB1, Description = Dihydroneopterin aldolase 1, PFAM = PF02152)' T
'25.9' 'C1-metabolism.dihydroneopterin aldolase' 'niben101scf01634_186477-190232' '(at5g62980 : 88.2) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in folate biosynthesis as a homooctamer in vivo.; FOLB2; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT3G11750.1); Has 2737 Blast hits to 2737 proteins in 1212 species: Archae - 4; Bacteria - 2338; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|31728 : 80.3) no description available & (reliability: 176.4) & (original description: Putative FOLB1, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T
'25.10' 'C1-metabolism.formate dehydrogenase' 'nbv0.5scaffold655_567214-573328' '(q07511|fdh_soltu : 751.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (at5g14780 : 622.0) Encodes a NAD-dependent formate dehydrogenase.; formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink). & (gnl|cdd|82283 : 444.0) no description available & (gnl|cdd|35292 : 334.0) no description available & (reliability: 1244.0) & (original description: Putative FDH1, Description = Formate dehydrogenase, mitochondrial, PFAM = PF02826;PF00389)' T
'25.10' 'C1-metabolism.formate dehydrogenase' 'niben101scf01091_48384-55196' '(q07511|fdh_soltu : 734.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (at5g14780 : 618.0) Encodes a NAD-dependent formate dehydrogenase.; formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink). & (gnl|cdd|82283 : 442.0) no description available & (gnl|cdd|35292 : 335.0) no description available & (reliability: 1236.0) & (original description: Putative FDH1, Description = Formate dehydrogenase, mitochondrial, PFAM = PF00389;PF02826)' T
'25.11' 'C1-metabolism.S-(hydroxymethyl)glutathione dehydrogenase & S-(hydroxymethyl)glutathione synthase' '' ''
'26' 'misc' '' ''
'26.1' 'misc.misc2' 'nbv0.3scaffold1255_75186-80614' '(at4g02340 : 223.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 208.0) no description available & (gnl|cdd|30941 : 97.1) no description available & (reliability: 446.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold11958_2633-13417' '(at4g19185 : 486.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold18343_10257-20397' '(at3g23600 : 297.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 221.0) no description available & (q9zt66|e134_maize : 129.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 93.9) no description available & (reliability: 594.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold33588_16623-21976' '(at1g73740 : 400.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0; Bacteria - 5567; Metazoa - 4; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (gnl|cdd|80731 : 294.0) no description available & (reliability: 800.0) & (original description: Putative murG, Description = UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, PFAM = PF03033;PF04101)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold47158_524-5609' '(at3g23600 : 330.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 239.0) no description available & (q9zt66|e134_maize : 166.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 102.0) no description available & (reliability: 660.0) & (original description: Putative Os08g0238200, Description = Os08g0238200 protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold79558_1-4560' '(at3g23600 : 249.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 187.0) no description available & (q9zt66|e134_maize : 120.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 94.7) no description available & (reliability: 498.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'nbv0.3scaffold85205_582-5884' '(at3g23600 : 231.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 178.0) no description available & (q9zt66|e134_maize : 82.8) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 462.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold539_98912-104220' '(at3g23600 : 287.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 224.0) no description available & (q9zt66|e134_maize : 116.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 91.6) no description available & (reliability: 574.0) & (original description: Putative GLU, Description = GLU protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold691_469834-478156' '(at3g51000 : 182.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 177.0) no description available & (gnl|cdd|30941 : 85.9) no description available & (reliability: 364.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold1715_50294-56365' '(at4g02340 : 429.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 328.0) no description available & (gnl|cdd|81168 : 105.0) no description available & (reliability: 858.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold1873_77282-94301' '(at4g19185 : 439.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 836.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 2982.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold3492_136952-147633' '(at4g25720 : 309.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 189.0) no description available & (reliability: 618.0) & (original description: Putative XCV2519, Description = Glutamine cyclotransferase, PFAM = PF05096)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold4028_109241-114215' '(gnl|cdd|39380 : 110.0) no description available & (at3g51000 : 101.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative eh3, Description = Epoxide hydrolase-like protein, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'nbv0.5scaffold5315_44745-57523' '(at1g72190 : 303.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 134.0) no description available & (gnl|cdd|84741 : 122.0) no description available & (reliability: 606.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF02826;PF00389)' T
'26.1' 'misc.misc2' 'niben044scf00006365ctg016_575-11033' '(at3g23600 : 180.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 143.0) no description available & (q9zt66|e134_maize : 87.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 360.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben044scf00006365ctg016_741-11191' '(at3g23600 : 280.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 209.0) no description available & (q9zt66|e134_maize : 111.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 90.4) no description available & (reliability: 560.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben044scf00007921ctg008_2562-8575' '(at1g72190 : 267.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 140.0) no description available & (gnl|cdd|84741 : 136.0) no description available & (reliability: 534.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF00389;PF02826)' T
'26.1' 'misc.misc2' 'niben044scf00030870ctg001_1086-4871' '(at3g51000 : 209.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 207.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 418.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben044scf00047303ctg004_25063-30675' '(at3g18270 : 520.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 310.0) no description available & (reliability: 1040.0) & (original description: Putative sce2857, Description = L-Ala-D/L-Glu epimerase, PFAM = PF02746;PF13378)' T
'26.1' 'misc.misc2' 'niben101scf00120_278844-283818' '(gnl|cdd|39380 : 195.0) no description available & (at3g51000 : 191.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|30941 : 90.5) no description available & (reliability: 382.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3048.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T
'26.1' 'misc.misc2' 'niben101scf00369_1825547-1830923' '(at3g05600 : 439.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink). & (gnl|cdd|39380 : 354.0) no description available & (gnl|cdd|81168 : 104.0) no description available & (reliability: 878.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf00428_793271-799220' '(at3g18270 : 515.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 308.0) no description available & (reliability: 1030.0) & (original description: Putative sce2857, Description = Mandelate racemase/muconate lactonizing protein, PFAM = PF02746;PF13378)' T
'26.1' 'misc.misc2' 'niben101scf00640_514499-530502' '(gnl|cdd|39380 : 210.0) no description available & (at4g02340 : 206.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|30941 : 95.9) no description available & (reliability: 412.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3036.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T
'26.1' 'misc.misc2' 'niben101scf00934_190895-201043' '(at3g23600 : 200.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 157.0) no description available & (q9zt66|e134_maize : 105.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 400.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf00934_192465-201201' '(at3g23600 : 296.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 222.0) no description available & (q9zt66|e134_maize : 129.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 95.1) no description available & (reliability: 592.0) & (original description: Putative GLU, Description = GLU protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf01181_395021-400380' '(at3g18270 : 516.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 311.0) no description available & (reliability: 1032.0) & (original description: Putative sce2857, Description = L-Ala-D/L-Glu epimerase, PFAM = PF13378;PF02746)' T
'26.1' 'misc.misc2' 'niben101scf01413_173471-178611' '(at4g21580 : 483.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G61510.1); Has 44345 Blast hits to 44175 proteins in 2827 species: Archae - 637; Bacteria - 28883; Metazoa - 1910; Fungi - 3863; Plants - 1554; Viruses - 0; Other Eukaryotes - 7498 (source: NCBI BLink). & (gnl|cdd|30949 : 292.0) no description available & (gnl|cdd|36412 : 245.0) no description available & (q8h0m1|qorh_spiol : 83.6) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 966.0) & (original description: Putative ppsC, Description = NADPH:quinone oxidoreductase, PFAM = PF08240;PF00107)' T
'26.1' 'misc.misc2' 'niben101scf01628_255550-266089' '(at3g05600 : 439.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink). & (gnl|cdd|39380 : 351.0) no description available & (gnl|cdd|81168 : 101.0) no description available & (reliability: 878.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf02014_9334-14664' '(at4g21580 : 485.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G61510.1); Has 44345 Blast hits to 44175 proteins in 2827 species: Archae - 637; Bacteria - 28883; Metazoa - 1910; Fungi - 3863; Plants - 1554; Viruses - 0; Other Eukaryotes - 7498 (source: NCBI BLink). & (gnl|cdd|30949 : 293.0) no description available & (gnl|cdd|36412 : 244.0) no description available & (q8h0m1|qorh_spiol : 86.7) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 970.0) & (original description: Putative qor, Description = Putative quinone oxidoreductase, PFAM = PF00107;PF08240)' T
'26.1' 'misc.misc2' 'niben101scf02080_236285-247215' '(at1g13560 : 650.0) Encodes aminoalcoholphosphotransferase AAPT1.; aminoalcoholphosphotransferase 1 (AAPT1); FUNCTIONS IN: phosphatidyltransferase activity, phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: aminoalcoholphosphotransferase (TAIR:AT3G25585.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38088 : 371.0) no description available & (gnl|cdd|34655 : 196.0) no description available & (reliability: 1300.0) & (original description: Putative AAPT1, Description = Choline/ethanolaminephosphotransferase 1, PFAM = PF01066)' T
'26.1' 'misc.misc2' 'niben101scf02340_343079-348566' '(gnl|cdd|39380 : 202.0) no description available & (at3g51000 : 196.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|30941 : 101.0) no description available & (reliability: 392.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf02485_12999-17589' '(at3g23600 : 264.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 197.0) no description available & (q9zt66|e134_maize : 139.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 97.0) no description available & (reliability: 528.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf03114_455205-462222' '(at4g25720 : 340.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 223.0) no description available & (reliability: 680.0) & (original description: Putative qct, Description = Glutaminyl-peptide cyclotransferase, PFAM = PF05096)' T
'26.1' 'misc.misc2' 'niben101scf03121_405670-431276' '(at1g72190 : 445.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 239.0) no description available & (gnl|cdd|84741 : 214.0) no description available & (q9sxp2|fdh1_orysa : 95.9) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative 20, Description = Erythronate-4-phosphate+dehydrogenase+domain+containing+protein, PFAM = PF02826;PF00389)' T
'26.1' 'misc.misc2' 'niben101scf03550_185882-191235' '(at1g73740 : 248.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0; Bacteria - 5567; Metazoa - 4; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (gnl|cdd|80731 : 161.0) no description available & (reliability: 496.0) & (original description: Putative murG, Description = UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, PFAM = PF04101;PF03033)' T
'26.1' 'misc.misc2' 'niben101scf03645_555186-559100' '(at1g15390 : 327.0) encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis.; peptide deformylase 1A (PDF1A); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation, co-translational protein modification; LOCATED IN: mitochondrion, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1B (TAIR:AT5G14660.2); Has 10999 Blast hits to 10999 proteins in 2667 species: Archae - 4; Bacteria - 8033; Metazoa - 124; Fungi - 0; Plants - 109; Viruses - 2; Other Eukaryotes - 2727 (source: NCBI BLink). & (gnl|cdd|38347 : 271.0) no description available & (gnl|cdd|80550 : 172.0) no description available & (reliability: 654.0) & (original description: Putative PDF1A, Description = Peptide deformylase 1A, chloroplastic, PFAM = PF01327)' T
'26.1' 'misc.misc2' 'niben101scf03706_152501-160134' '(at4g02340 : 430.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 327.0) no description available & (gnl|cdd|81168 : 104.0) no description available & (reliability: 860.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf03786_361756-374099' '(at2g32520 : 379.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: response to zinc ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase, active site (InterPro:IPR020610), Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G35420.2); Has 3505 Blast hits to 3505 proteins in 948 species: Archae - 38; Bacteria - 2818; Metazoa - 67; Fungi - 17; Plants - 98; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (gnl|cdd|38253 : 182.0) no description available & (gnl|cdd|85638 : 165.0) no description available & (reliability: 758.0) & (original description: Putative yghX, Description = Carboxymethylenebutenolidase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf04776_229530-234700' '(at3g23600 : 328.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 237.0) no description available & (q9zt66|e134_maize : 165.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 105.0) no description available & (reliability: 656.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf04776_268701-276736' '(at3g23600 : 222.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 185.0) no description available & (q9zt66|e134_maize : 114.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 444.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf05018_39842-50249' '(at4g19185 : 429.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T
'26.1' 'misc.misc2' 'niben101scf06556_719134-723214' '(at4g02340 : 403.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 318.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 806.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf06556_727471-732956' '(at4g15960 : 379.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G15955.3); Has 13367 Blast hits to 13327 proteins in 1535 species: Archae - 74; Bacteria - 9325; Metazoa - 500; Fungi - 482; Plants - 526; Viruses - 1; Other Eukaryotes - 2459 (source: NCBI BLink). & (gnl|cdd|39380 : 320.0) no description available & (gnl|cdd|30941 : 104.0) no description available & (reliability: 758.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF12697)' T
'26.1' 'misc.misc2' 'niben101scf06684_70918-89813' '(at4g25720 : 330.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 205.0) no description available & (reliability: 660.0) & (original description: Putative qct, Description = Glutaminyl-peptide cyclotransferase, PFAM = PF05096)' T
'26.1' 'misc.misc2' 'niben101scf08531_389100-393730' '(at1g35420 : 330.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23600.1). & (gnl|cdd|38253 : 189.0) no description available & (gnl|cdd|85638 : 105.0) no description available & (reliability: 660.0) & (original description: Putative BnaAnng02030D, Description = BnaAnng02030D protein, PFAM = PF01738)' T
'26.1' 'misc.misc2' 'niben101scf08566_41131-45896' '(at5g64250 : 465.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: oxidoreductase activity, catalytic activity, nitronate monooxygenase activity; INVOLVED IN: response to cadmium ion, response to symbiotic fungus, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 2-nitropropane dioxygenase, NPD (InterPro:IPR004136); Has 10497 Blast hits to 10450 proteins in 2031 species: Archae - 24; Bacteria - 7204; Metazoa - 23; Fungi - 537; Plants - 70; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|73392 : 206.0) no description available & (reliability: 930.0) & (original description: Putative pco099340a, Description = Oxidoreductase, PFAM = PF03060;PF03060)' T
'26.1' 'misc.misc2' 'niben101scf10132_204599-209506' '(at5g14660 : 319.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (gnl|cdd|38347 : 222.0) no description available & (gnl|cdd|29602 : 181.0) no description available & (reliability: 638.0) & (original description: Putative PDF1B, Description = Peptide deformylase 1B, chloroplastic, PFAM = PF01327)' T
'26.1' 'misc.misc2' 'niben101scf10352_15384-21373' '(gnl|cdd|39380 : 215.0) no description available & (at4g02340 : 198.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|30941 : 104.0) no description available & (reliability: 396.0) & (original description: Putative eh3, Description = Epoxide hydrolase-like protein, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf10737_57371-62112' '(at4g02340 : 442.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 351.0) no description available & (gnl|cdd|81168 : 109.0) no description available & (reliability: 884.0) & (original description: Putative seh1, Description = Soluble epoxide hydrolase, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf11791_1-6619' '(at4g02340 : 496.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 361.0) no description available & (gnl|cdd|30941 : 115.0) no description available & (reliability: 992.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf13186_473576-478412' '(at5g14660 : 320.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (gnl|cdd|38347 : 219.0) no description available & (gnl|cdd|29602 : 180.0) no description available & (reliability: 640.0) & (original description: Putative PDF1B, Description = Peptide deformylase 1B, chloroplastic, PFAM = PF01327)' T
'26.1' 'misc.misc2' 'niben101scf15594_34631-38777' '(at3g51000 : 210.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 205.0) no description available & (gnl|cdd|30941 : 102.0) no description available & (reliability: 420.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T
'26.1' 'misc.misc2' 'niben101scf17834_70097-78862' '(at5g58240 : 259.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38589 : 210.0) no description available & (gnl|cdd|29588 : 144.0) no description available & (reliability: 518.0) & (original description: Putative FHIT, Description = Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, PFAM = PF01230)' T
'26.1' 'misc.misc2' 'niben101scf18080_9752-16753' '(at3g56460 : 504.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 42737 Blast hits to 42567 proteins in 2748 species: Archae - 582; Bacteria - 27121; Metazoa - 1964; Fungi - 3760; Plants - 1452; Viruses - 3; Other Eukaryotes - 7855 (source: NCBI BLink). & (gnl|cdd|30949 : 217.0) no description available & (gnl|cdd|36412 : 192.0) no description available & (reliability: 1008.0) & (original description: Putative ppsC, Description = Beta-ketoacyl-acyl-carrier-protein synthase I, PFAM = PF00107;PF08240)' T
'26.1' 'misc.misc2' 'niben101scf18430_155599-167132' '(at4g02340 : 374.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 309.0) no description available & (gnl|cdd|30941 : 89.4) no description available & (reliability: 748.0) & (original description: Putative seh, Description = Putative epoxide hydrolase, PFAM = PF12697)' T
'26.1' 'misc.misc2' 'niben101scf25633_86948-94175' '(at5g58240 : 252.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38589 : 200.0) no description available & (gnl|cdd|29588 : 137.0) no description available & (reliability: 504.0) & (original description: Putative aph1, Description = Bis(5'-adenosyl)-triphosphatase, PFAM = PF01230)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold1980_80282-87950' '(at4g38040 : 92.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold4370_22524-52280' '(at4g27480 : 598.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 306.0) no description available & (gnl|cdd|66199 : 252.0) no description available & (reliability: 1196.0) & (original description: Putative GLCAT14A, Description = Beta-glucuronosyltransferase GlcAT14A, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold4893_50228-56491' '(at1g18580 : 813.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1626.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold7598_49131-52525' '(p56725|zox_phavu : 447.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 192.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 141.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold8220_16462-23704' '(at5g38460 : 463.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT2G44660.1). & (gnl|cdd|37786 : 263.0) no description available & (gnl|cdd|79991 : 235.0) no description available & (reliability: 926.0) & (original description: Putative alg6, Description = Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold9980_4907-10537' '(at5g60700 : 1126.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2252.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold10523_35406-39192' '(at1g22360 : 323.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 176.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 96.5) no description available & (reliability: 646.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold12407_41272-44463' '(at3g62720 : 718.0) Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.; xylosyltransferase 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: UDP-xylosyltransferase 2 (TAIR:AT4G02500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39945 : 376.0) no description available & (gnl|cdd|69175 : 235.0) no description available & (reliability: 1436.0) & (original description: Putative XXT1, Description = Xyloglucan 6-xylosyltransferase 1, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold13835_12642-16150' '(at5g62220 : 478.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 310.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 262.0) no description available & (gnl|cdd|66673 : 213.0) no description available & (reliability: 956.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold17462_20417-24273' '(at1g63450 : 591.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 353.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 291.0) no description available & (gnl|cdd|36239 : 286.0) no description available & (reliability: 1182.0) & (original description: Putative GT20, Description = Probable xyloglucan galactosyltransferase GT20, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold21916_20521-26947' '(at3g24040 : 453.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 234.0) no description available & (gnl|cdd|66199 : 215.0) no description available & (reliability: 906.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold25747_17201-20664' '(at5g62220 : 586.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 301.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 280.0) no description available & (gnl|cdd|66673 : 210.0) no description available & (reliability: 1172.0) & (original description: Putative GT11, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold29509_25265-36450' '(at2g38650 : 571.0) galacturonosyltransferase 7 (GAUT7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 4 (TAIR:AT5G47780.1). & (gnl|cdd|85496 : 126.0) no description available & (reliability: 1142.0) & (original description: Putative GAUT7, Description = Probable galacturonosyltransferase 7, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold30499_12942-22257' '(at4g32120 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G25300.1); Has 596 Blast hits to 595 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 0; Plants - 427; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37499 : 296.0) no description available & (gnl|cdd|85659 : 99.6) no description available & (reliability: 964.0) & (original description: Putative HPGT2, Description = Hydroxyproline O-galactosyltransferase HPGT2, PFAM = PF13334;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold31315_20225-23710' '(at1g27440 : 735.0) GUT2; FUNCTIONS IN: glucuronoxylan glucuronosyltransferase activity, catalytic activity; INVOLVED IN: secondary cell wall biogenesis, glucuronoxylan biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G61840.1); Has 1460 Blast hits to 1436 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 310; Fungi - 4; Plants - 1003; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|36239 : 261.0) no description available & (gnl|cdd|66673 : 165.0) no description available & (reliability: 1470.0) & (original description: Putative IRX10, Description = Probable beta-1,4-xylosyltransferase IRX10, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold39230_382-10538' '(at4g19900 : 551.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 229.0) no description available & (gnl|cdd|68155 : 88.9) no description available & (reliability: 1102.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold39340_14393-17913' '(at3g21760 : 387.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 193.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 774.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold57643_1350-5880' '(at3g21760 : 396.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.4) no description available & (reliability: 792.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold58477_9322-12360' '(at3g28340 : 478.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 186.0) no description available & (reliability: 912.0) & (original description: Putative GATL10, Description = Probable galacturonosyltransferase-like 10, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold61581_10014-11468' '(at4g38040 : 152.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 114.0) no description available & (gnl|cdd|66673 : 88.2) no description available & (reliability: 304.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold61632_5590-11253' '(at3g15940 : 717.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 164.0) no description available & (gnl|cdd|30787 : 85.5) no description available & (reliability: 1434.0) & (original description: Putative 1g52420, Description = AT3g15940/MVC8_7, PFAM = PF16994;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold66769_1-6793' '(at3g24040 : 293.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 135.0) no description available & (gnl|cdd|66199 : 113.0) no description available & (reliability: 586.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold78434_2669-7480' '(at5g61840 : 732.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 171.0) no description available & (reliability: 1464.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 854.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold92618_176-2815' '(at1g03520 : 272.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 942 Blast hits to 942 proteins in 115 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 314; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36018 : 138.0) no description available & (gnl|cdd|66199 : 128.0) no description available & (reliability: 544.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 744.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 876.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold109876_1-2601' '(at4g22580 : 577.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|36239 : 228.0) no description available & (q8h038|katam_orysa : 223.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 213.0) no description available & (reliability: 1154.0) & (original description: Putative GT19, Description = Probable xyloglucan galactosyltransferase GT19, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 234.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold238_418311-420323' '(at4g16710 : 135.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 111.0) no description available & (reliability: 270.0) & (original description: Putative ALG13, Description = UDP-N-acetylglucosamine transferase subunit alg13, PFAM = PF04101)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 338.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold273_549474-552378' '(p56725|zox_phavu : 120.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g36770 : 87.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72E1 (TAIR:AT3G50740.1); Has 8229 Blast hits to 8179 proteins in 484 species: Archae - 0; Bacteria - 520; Metazoa - 2565; Fungi - 32; Plants - 4963; Viruses - 88; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 84.6) no description available & (reliability: 174.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold343_505652-510697' '(at1g22360 : 352.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 217.0) no description available & (q41819|iaag_maize : 185.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 704.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 318.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold951_205318-208752' '(at1g75420 : 387.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 214.0) no description available & (reliability: 750.0) & (original description: Putative GT4A2, Description = Lipopolysaccharide core biosynthesis mannosyltransferase lpsB, PFAM = PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1151_83851-87359' '(at5g62220 : 477.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 308.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 260.0) no description available & (gnl|cdd|66673 : 212.0) no description available & (reliability: 954.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1360_118420-124480' '(at1g22380 : 319.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 101.0) no description available & (reliability: 638.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1421_163842-174514' '(at1g21480 : 435.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 103.0) no description available & (reliability: 870.0) & (original description: Putative LOC100192822, Description = Glycosyltransferase, family GT47, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 304.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2277_44958-49667' '(at5g17050 : 445.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43641|ufog_solme : 340.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 185.0) no description available & (gnl|cdd|79510 : 147.0) no description available & (reliability: 812.0) & (original description: Putative bz, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2392_117686-122409' '(at3g02350 : 803.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1606.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2568_170910-174478' '(at5g62220 : 460.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 313.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 270.0) no description available & (gnl|cdd|66673 : 220.0) no description available & (reliability: 920.0) & (original description: Putative BnaA05g10990D, Description = BnaA05g10990D protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold3896_214289-220199' '(at5g62620 : 853.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 308.0) no description available & (gnl|cdd|85659 : 89.2) no description available & (reliability: 1706.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold4265_42769-46247' '(at5g12890 : 450.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 139.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 900.0) & (original description: Putative UGT92A1, Description = UDP-glycosyltransferase 92A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold4650_1-5551' '(at4g38040 : 275.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 195.0) no description available & (gnl|cdd|66673 : 159.0) no description available & (reliability: 550.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold7085_62302-70241' '(at5g04500 : 979.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 591.0) no description available & (gnl|cdd|72674 : 277.0) no description available & (reliability: 1958.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold7750_12770-16609' '(at5g14860 : 414.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G16890.2); Has 7679 Blast hits to 7613 proteins in 497 species: Archae - 0; Bacteria - 501; Metazoa - 1984; Fungi - 34; Plants - 4971; Viruses - 133; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 216.0) no description available & (p56725|zox_phavu : 145.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 828.0) & (original description: Putative UGT90A1, Description = UDP-glycosyltransferase 90A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold8779_5270-13142' '(at1g06780 : 617.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 166.0) no description available & (reliability: 1234.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold8921_14169-29508' '(at3g24040 : 449.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 236.0) no description available & (gnl|cdd|66199 : 213.0) no description available & (reliability: 898.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00000202ctg003_1198-4661' '(at5g62220 : 582.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 300.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 279.0) no description available & (gnl|cdd|66673 : 209.0) no description available & (reliability: 1164.0) & (original description: Putative XLT2, Description = Xyloglucan galactosyltransferase XLT2, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00003896ctg041_366-2607' '(at1g22380 : 233.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 466.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00004909ctg000_379-3018' '(at1g03520 : 272.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 942 Blast hits to 942 proteins in 115 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 314; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36018 : 135.0) no description available & (gnl|cdd|66199 : 128.0) no description available & (reliability: 544.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00005131ctg022_13543-18747' '(at5g60700 : 1125.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2250.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00005646ctg012_129-8056' '(at1g06780 : 627.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 167.0) no description available & (reliability: 1254.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00006077ctg025_3245-7181' '(at1g05680 : 380.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 290.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 111.0) no description available & (reliability: 746.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00007351ctg001_1127-3780' '(at3g50740 : 262.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (p56725|zox_phavu : 180.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 132.0) no description available & (gnl|cdd|79510 : 84.6) no description available & (reliability: 518.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 392.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00009437ctg008_1-4138' '(at3g15350 : 622.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G53100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36018 : 340.0) no description available & (gnl|cdd|66199 : 269.0) no description available & (reliability: 1244.0) & (original description: Putative BnaC05g38280D, Description = BnaC05g38280D protein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00013930ctg006_7578-16727' '(at1g31070 : 826.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 581.0) no description available & (gnl|cdd|34006 : 258.0) no description available & (reliability: 1634.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016048ctg025_1-1459' '(at3g24040 : 162.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66199 : 105.0) no description available & (gnl|cdd|36018 : 103.0) no description available & (reliability: 324.0) & (original description: Putative GT14A1, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016319ctg004_2399-5950' '(p56725|zox_phavu : 486.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 182.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 95.4) no description available & (reliability: 364.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016850ctg021_3468-8229' '(at3g02350 : 802.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1604.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 348.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017657ctg007_6289-9897' '(at4g15550 : 467.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 264.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 934.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017758ctg000_1-9836' '(at1g21480 : 583.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 159.0) no description available & (gnl|cdd|66673 : 134.0) no description available & (reliability: 1166.0) & (original description: Putative AT1G21480, Description = Predicted protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00018141ctg019_1-2055' '(at1g21480 : 142.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative AT1G21480, Description = Exostosin family protein isoform 1, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00018570ctg025_20653-25950' '(at1g18580 : 817.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1634.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019145ctg009_1-3570' '(at3g24040 : 284.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 126.0) no description available & (gnl|cdd|66199 : 110.0) no description available & (reliability: 568.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 478.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019841ctg000_27175-30260' '(at3g62660 : 579.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 201.0) no description available & (reliability: 1158.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00022311ctg010_1325-4809' '(at5g12890 : 314.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (p56725|zox_phavu : 160.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 628.0) & (original description: Putative UDP, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 770.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00024259ctg008_59215-65371' '(at4g38040 : 92.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00024259ctg010_8411-12193' '(at4g38040 : 284.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 206.0) no description available & (gnl|cdd|66673 : 164.0) no description available & (reliability: 568.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00026395ctg000_9445-19094' '(at5g62220 : 473.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 308.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 258.0) no description available & (gnl|cdd|66673 : 207.0) no description available & (reliability: 946.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00028734ctg002_13704-19697' '(at2g44660 : 634.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT5G38460.2); Has 667 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 273; Fungi - 247; Plants - 67; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37787 : 479.0) no description available & (gnl|cdd|79991 : 338.0) no description available & (reliability: 1268.0) & (original description: Putative alg8, Description = Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00030682ctg003_14566-19171' '(at1g33430 : 536.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen exine formation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G32930.1). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 150.0) no description available & (reliability: 968.0) & (original description: Putative B3GALT8, Description = Probable beta-1,3-galactosyltransferase 8, PFAM = PF13334;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00032091ctg008_2859-7138' '(at4g27480 : 568.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 317.0) no description available & (gnl|cdd|66199 : 250.0) no description available & (reliability: 1136.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00032671ctg003_1-2590' '(at1g22360 : 211.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q93xp7|czog1_maize : 146.0) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 422.0) & (original description: Putative BX8, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00033349ctg002_1281-4623' '(at4g01210 : 385.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative At4g01210, Description = Putative uncharacterized protein At4g01210, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00034164ctg001_5022-14618' '(at4g19900 : 574.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 235.0) no description available & (gnl|cdd|68155 : 103.0) no description available & (reliability: 1148.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00034922ctg007_9718-17222' '(at3g01040 : 836.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 181.0) no description available & (reliability: 1672.0) & (original description: Putative GAUT14, Description = Probable galacturonosyltransferase 14, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00038471ctg003_1961-8293' '(at2g39630 : 400.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 276.0) no description available & (gnl|cdd|84843 : 88.7) no description available & (reliability: 800.0) & (original description: Putative ALG5E, Description = Dolichyl-phosphate beta-glucosyltransferase ALG5E, PFAM = PF00535)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00041701ctg000_172-5511' '(at1g71070 : 541.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 270.0) no description available & (gnl|cdd|66199 : 235.0) no description available & (reliability: 1082.0) & (original description: Putative GnT, Description = N-acetylglucosaminyltransferase, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00044087ctg000_1-2018' '(at1g22370 : 81.6) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative UGT8, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00049613ctg000_1-4951' '(at1g13250 : 444.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 3 (GATL3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 4 (TAIR:AT3G06260.1); Has 2168 Blast hits to 2160 proteins in 496 species: Archae - 2; Bacteria - 1004; Metazoa - 285; Fungi - 17; Plants - 765; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 888.0) & (original description: Putative GATL3, Description = Probable galacturonosyltransferase-like 3, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00059667ctg000_1-7989' '(at1g75420 : 611.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 319.0) no description available & (gnl|cdd|84842 : 83.8) no description available & (reliability: 1182.0) & (original description: Putative GT4A2, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF16994;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00024_250572-255626' '(at5g62620 : 926.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 89.2) no description available & (reliability: 1852.0) & (original description: Putative BnaAnng17780D, Description = BnaAnng17780D protein, PFAM = PF01762;PF00337)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00063_595710-599503' '(at2g29040 : 546.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 533.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 305.0) no description available & (reliability: 1092.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00063_1392567-1397028' '(at1g74680 : 538.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|66673 : 259.0) no description available & (gnl|cdd|36239 : 254.0) no description available & (reliability: 1076.0) & (original description: Putative BnaA07g22100D, Description = BnaA07g22100D protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00085_632238-643423' '(at2g38650 : 444.0) galacturonosyltransferase 7 (GAUT7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 4 (TAIR:AT5G47780.1). & (gnl|cdd|85496 : 128.0) no description available & (reliability: 888.0) & (original description: Putative JS33, Description = Hexosyltransferase, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 630.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00128_505624-511523' '(at5g15050 : 659.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 346.0) no description available & (gnl|cdd|66199 : 264.0) no description available & (reliability: 1318.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00160_1125887-1132555' '(at1g78800 : 595.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink). & (gnl|cdd|36071 : 331.0) no description available & (gnl|cdd|30787 : 115.0) no description available & (reliability: 1190.0) & (original description: Putative alg2, Description = Alpha-1,3/1,6-mannosyltransferase ALG2, PFAM = PF13439;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 704.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00175_209120-212595' '(at3g21790 : 343.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (p56725|zox_phavu : 146.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 686.0) & (original description: Putative UDPG7, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00180_1195085-1198840' '(at1g61050 : 344.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|37139 : 333.0) no description available & (gnl|cdd|68155 : 142.0) no description available & (reliability: 688.0) & (original description: Putative BnaC01g39240D, Description = BnaC01g39240D protein, PFAM = PF04488;PF04572)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00207_497516-508790' '(at4g38040 : 282.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 199.0) no description available & (gnl|cdd|66673 : 156.0) no description available & (reliability: 564.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00234_381111-385200' '(at1g71070 : 269.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66199 : 178.0) no description available & (gnl|cdd|36018 : 176.0) no description available & (reliability: 538.0) & (original description: Putative Sb03g035990, Description = Putative uncharacterized protein Sb03g035990, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00270_1487043-1491573' '(at3g21760 : 381.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 762.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00273_264217-267302' '(at3g62660 : 577.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 197.0) no description available & (reliability: 1154.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00355_442897-446288' '(at4g14090 : 374.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 243.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 190.0) no description available & (gnl|cdd|79510 : 96.9) no description available & (reliability: 748.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00435_301932-305763' '(at1g05170 : 330.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 269.0) no description available & (gnl|cdd|85659 : 112.0) no description available & (reliability: 628.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00449_233588-238654' '(at2g37585 : 169.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G15050.1); Has 846 Blast hits to 846 proteins in 95 species: Archae - 0; Bacteria - 25; Metazoa - 486; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66199 : 113.0) no description available & (gnl|cdd|36018 : 110.0) no description available & (reliability: 338.0) & (original description: Putative GnT, Description = Core-2/I-branching enzyme, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00478_633899-636891' '(at1g80290 : 308.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 640 Blast hits to 640 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 8; Plants - 102; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|72674 : 209.0) no description available & (gnl|cdd|36240 : 152.0) no description available & (reliability: 616.0) & (original description: Putative At1g80290, Description = Glycosyltransferase family protein 64 C3, PFAM = PF09258)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00488_474652-480045' '(at5g62620 : 889.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 316.0) no description available & (gnl|cdd|84703 : 90.7) no description available & (reliability: 1778.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF00337;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00492_24611-28023' '(p56725|zox_phavu : 517.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 212.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 424.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00492_135541-138914' '(p56725|zox_phavu : 485.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g31750 : 192.0) UDP-glucosyl transferase 74D1 (UGT74D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8199 Blast hits to 8111 proteins in 470 species: Archae - 0; Bacteria - 484; Metazoa - 2414; Fungi - 25; Plants - 5092; Viruses - 117; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 91.5) no description available & (reliability: 384.0) & (original description: Putative ZOG3, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00543_211920-217880' '(at5g62620 : 877.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 313.0) no description available & (gnl|cdd|85659 : 91.9) no description available & (reliability: 1754.0) & (original description: Putative GALT5, Description = Hydroxyproline O-galactosyltransferase GALT5, PFAM = PF00337;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 320.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1166.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00672_103266-107219' '(at5g12890 : 428.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 149.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 856.0) & (original description: Putative UGT92A1, Description = UDP-glycosyltransferase 92A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00691_294372-301223' '(at1g06780 : 613.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 177.0) no description available & (reliability: 1226.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 822.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 876.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 832.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00906_67102-70705' '(q43641|ufog_solme : 613.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 424.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|79510 : 140.0) no description available & (reliability: 764.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00962_295487-320859' '(at1g77810 : 602.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 404.0) no description available & (gnl|cdd|85659 : 156.0) no description available & (reliability: 1096.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00980_765308-771054' '(at3g03690 : 496.0) unfertilized embryo sac 7 (UNE7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G27480.2); Has 941 Blast hits to 940 proteins in 124 species: Archae - 0; Bacteria - 56; Metazoa - 535; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 274.0) no description available & (gnl|cdd|66199 : 234.0) no description available & (reliability: 992.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01017_305263-309338' '(at1g05680 : 381.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 285.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 198.0) no description available & (gnl|cdd|79510 : 108.0) no description available & (reliability: 754.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01036_540403-571192' '(at4g27480 : 590.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 307.0) no description available & (gnl|cdd|66199 : 252.0) no description available & (reliability: 1180.0) & (original description: Putative BnaCnng64970D, Description = BnaC07g40910D protein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01124_1085168-1092394' '(at3g57630 : 1213.0) exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66673 : 209.0) no description available & (gnl|cdd|36239 : 175.0) no description available & (reliability: 2426.0) & (original description: Putative BnaA09g36940D, Description = BnaA09g36940D protein, PFAM = PF03016;PF07974)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01124_2409012-2412373' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 181.0) no description available & (q43716|ufog_pethy : 180.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 86.9) no description available & (reliability: 382.0) & (original description: Putative CsUGT134, Description = UDP-glycosyltransferase 94P1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01177_554016-562939' '(at4g19900 : 555.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 243.0) no description available & (gnl|cdd|68155 : 98.9) no description available & (reliability: 1110.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01188_818875-822359' '(at5g12890 : 325.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 150.0) no description available & (gnl|cdd|79510 : 81.5) no description available & (reliability: 650.0) & (original description: Putative UDP, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01225_244495-251830' '(at1g05680 : 448.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 328.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 200.0) no description available & (gnl|cdd|79510 : 110.0) no description available & (reliability: 870.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01269_1277586-1283296' '(at1g05170 : 650.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 422.0) no description available & (gnl|cdd|85659 : 164.0) no description available & (reliability: 1238.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF01762;PF13334)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01273_70585-80689' '(at1g67410 : 511.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G74680.1); Has 1249 Blast hits to 1240 proteins in 88 species: Archae - 0; Bacteria - 6; Metazoa - 115; Fungi - 4; Plants - 1041; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36239 : 236.0) no description available & (gnl|cdd|66673 : 225.0) no description available & (reliability: 1022.0) & (original description: Putative ARAD1, Description = Probable arabinosyltransferase ARAD1, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01300_417443-420834' '(at2g16890 : 458.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G14860.1); Has 7578 Blast hits to 7495 proteins in 486 species: Archae - 0; Bacteria - 511; Metazoa - 1925; Fungi - 34; Plants - 4955; Viruses - 98; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|36406 : 206.0) no description available & (p56725|zox_phavu : 149.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 916.0) & (original description: Putative UGT90A1, Description = UDP-glycosyltransferase 90A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01314_216767-223576' '(at5g15050 : 466.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 256.0) no description available & (gnl|cdd|66199 : 251.0) no description available & (reliability: 932.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01326_1124647-1130247' '(at5g15050 : 650.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 341.0) no description available & (gnl|cdd|66199 : 260.0) no description available & (reliability: 1300.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01341_61799-65307' '(at4g15480 : 515.0) Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.; UGT84A1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7986 Blast hits to 7909 proteins in 477 species: Archae - 0; Bacteria - 354; Metazoa - 2305; Fungi - 71; Plants - 5077; Viruses - 110; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 191.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 86.5) no description available & (reliability: 1030.0) & (original description: Putative GT2, Description = Cinnamate beta-D-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 372.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01481_34175-43909' '(at5g04500 : 976.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 591.0) no description available & (gnl|cdd|72674 : 280.0) no description available & (reliability: 1952.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01557_595710-599216' '(p56725|zox_phavu : 435.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g50740 : 196.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 165.0) no description available & (gnl|cdd|79510 : 90.4) no description available & (reliability: 374.0) & (original description: Putative PGSC0003DMG400035370, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01559_94486-97253' '(at1g07250 : 402.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.8) no description available & (reliability: 804.0) & (original description: Putative GT3, Description = Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01596_835985-841775' '(at5g61840 : 727.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 263.0) no description available & (gnl|cdd|66673 : 171.0) no description available & (reliability: 1454.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_54304-57716' '(at4g15550 : 442.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 256.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 210.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 884.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_230122-233534' '(at4g14090 : 364.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 188.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 93.9) no description available & (reliability: 728.0) & (original description: Putative UGT75C1, Description = UDP-glycosyltransferase 75C1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_262101-265555' '(at1g05530 : 374.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (q41819|iaag_maize : 248.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 748.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01739_385108-394953' '(at1g31070 : 825.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 584.0) no description available & (gnl|cdd|34006 : 259.0) no description available & (reliability: 1634.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01756_17784-41102' '(at4g01210 : 1136.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 2272.0) & (original description: Putative At4g01210, Description = Glycosyl transferase family 1 protein, PFAM = PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 398.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 376.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01908_3129-7567' '(at1g74680 : 554.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 247.0) no description available & (reliability: 1108.0) & (original description: Putative At1g74680, Description = At1g74680/F1M20_36, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01908_57823-62571' '(at5g15050 : 489.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 281.0) no description available & (gnl|cdd|66199 : 237.0) no description available & (reliability: 978.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01922_344891-352907' '(at3g24040 : 449.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 234.0) no description available & (gnl|cdd|66199 : 216.0) no description available & (reliability: 898.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01933_62320-65648' '(at4g37690 : 501.0) Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 216.0) no description available & (gnl|cdd|69175 : 187.0) no description available & (reliability: 1002.0) & (original description: Putative GT6, Description = Glycosyltransferase 6, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01951_82991-87074' '(at3g11340 : 395.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q43641|ufog_solme : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 790.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01980_1023582-1027599' '(at1g22400 : 654.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 257.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 118.0) no description available & (reliability: 1304.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02008_55768-66424' '(at2g39630 : 493.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 353.0) no description available & (gnl|cdd|84843 : 89.1) no description available & (reliability: 986.0) & (original description: Putative ALG5, Description = Dolichyl-phosphate beta-glucosyltransferase, PFAM = PF00535)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02085_1855945-1861211' '(at3g46670 : 378.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 111.0) no description available & (reliability: 756.0) & (original description: Putative UGT76E2, Description = UDP-glycosyltransferase 76E2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02165_335924-341576' '(at5g60700 : 1116.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2232.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 628.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02215_533394-537074' '(at3g50760 : 463.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 926.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02253_822254-828191' '(at5g15050 : 610.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 323.0) no description available & (gnl|cdd|66199 : 249.0) no description available & (reliability: 1220.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02269_200689-206534' '(at5g01250 : 355.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT3G09020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37139 : 336.0) no description available & (gnl|cdd|68155 : 136.0) no description available & (reliability: 710.0) & (original description: Putative BnaA01g30130D, Description = BnaA01g30130D protein, PFAM = PF04572;PF04488)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02289_1091076-1100461' '(at3g01040 : 849.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 181.0) no description available & (reliability: 1698.0) & (original description: Putative GT8, Description = Hexosyltransferase, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02315_145439-151919' '(at2g36970 : 644.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36406 : 206.0) no description available & (q41819|iaag_maize : 192.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 80.0) no description available & (reliability: 1288.0) & (original description: Putative UGT86A1, Description = UDP-glycosyltransferase 86A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02357_78207-86473' '(at3g58790 : 607.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 15 (GAUT15); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1513 Blast hits to 1502 proteins in 296 species: Archae - 0; Bacteria - 573; Metazoa - 140; Fungi - 8; Plants - 775; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 165.0) no description available & (reliability: 1214.0) & (original description: Putative GAUT15, Description = Probable galacturonosyltransferase 15, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02358_12070-19948' '(at5g47780 : 806.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 4 (GAUT4); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 207.0) no description available & (reliability: 1612.0) & (original description: Putative GAUT4, Description = Probable galacturonosyltransferase 4, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02437_186426-191041' '(at3g21750 : 416.0) Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro; UDP-glucosyl transferase 71B1 (UGT71B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21760.1); Has 7577 Blast hits to 7528 proteins in 438 species: Archae - 0; Bacteria - 404; Metazoa - 2188; Fungi - 36; Plants - 4867; Viruses - 24; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 83.5) no description available & (reliability: 832.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02459_568793-572202' '(at5g62220 : 442.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 306.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 239.0) no description available & (gnl|cdd|66673 : 211.0) no description available & (reliability: 884.0) & (original description: Putative GT14, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02476_340145-343635' '(at2g15480 : 339.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 183.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 678.0) & (original description: Putative GAME2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02476_370700-374205' '(at4g34135 : 330.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32004 : 103.0) no description available & (reliability: 660.0) & (original description: Putative SAP1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 902.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02537_879684-883233' '(at1g22360 : 658.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p14726|ufog_horvu : 188.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 128.0) no description available & (reliability: 1316.0) & (original description: Putative UGT85A23, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02537_899848-902369' '(at1g22370 : 244.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 102.0) no description available & (reliability: 488.0) & (original description: Putative F3GT, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02571_120588-125712' '(at5g62620 : 875.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 102.0) no description available & (reliability: 1750.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02606_512766-518087' '(at2g36970 : 575.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36406 : 204.0) no description available & (q41819|iaag_maize : 181.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 1150.0) & (original description: Putative UGT86A1, Description = UDP-glycosyltransferase 86A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02622_707391-713524' '(at5g04500 : 983.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 615.0) no description available & (gnl|cdd|72674 : 281.0) no description available & (reliability: 1966.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02653_646676-650154' '(at1g22370 : 211.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 117.0) no description available & (p56725|zox_phavu : 86.7) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 422.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02706_74247-118412' '(at2g25300 : 476.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 600 Blast hits to 599 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|37499 : 293.0) no description available & (gnl|cdd|85659 : 100.0) no description available & (reliability: 932.0) & (original description: Putative HPGT2, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02738_478978-483590' '(at3g02350 : 718.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 151.0) no description available & (reliability: 1436.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02751_261362-266172' '(at1g22360 : 649.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 247.0) no description available & (p14726|ufog_horvu : 181.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1298.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02791_195848-205061' '(at2g20810 : 820.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 10 (GAUT10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 11 (TAIR:AT1G18580.1); Has 1414 Blast hits to 1410 proteins in 236 species: Archae - 0; Bacteria - 438; Metazoa - 146; Fungi - 0; Plants - 818; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|85496 : 173.0) no description available & (reliability: 1640.0) & (original description: Putative GAUT10, Description = Probable galacturonosyltransferase 10, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 790.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_313261-316700' '(at3g21790 : 425.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 98.9) no description available & (reliability: 850.0) & (original description: Putative UGT71S3, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_320011-323549' '(at3g21760 : 454.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 162.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 908.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 834.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 962.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03056_200596-204251' '(at3g02100 : 308.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 167.0) no description available & (q41819|iaag_maize : 147.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 89.2) no description available & (reliability: 616.0) & (original description: Putative GTK11, Description = UDP-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03076_102182-108886' '(at2g35100 : 574.0) Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.; ARABINAN DEFICIENT 1 (ARAD1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, catalytic activity; INVOLVED IN: pectin biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G44930.2); Has 1290 Blast hits to 1285 proteins in 106 species: Archae - 0; Bacteria - 8; Metazoa - 193; Fungi - 4; Plants - 1016; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36239 : 229.0) no description available & (gnl|cdd|66673 : 226.0) no description available & (reliability: 1148.0) & (original description: Putative ARAD1, Description = Probable arabinosyltransferase ARAD1, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03106_150766-153893' '(at1g70090 : 565.0) Encodes a protein with putative galacturonosyltransferase activity.; glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 199.0) no description available & (reliability: 1130.0) & (original description: Putative GATL9, Description = Probable galacturonosyltransferase-like 9, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03188_706506-710074' '(at5g62220 : 461.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 313.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 271.0) no description available & (gnl|cdd|66673 : 220.0) no description available & (reliability: 922.0) & (original description: Putative BnaA05g10990D, Description = BnaA05g10990D protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 726.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03340_792483-798257' '(at1g34270 : 644.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1266 Blast hits to 1263 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 4; Plants - 1015; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|66673 : 218.0) no description available & (gnl|cdd|36239 : 209.0) no description available & (reliability: 1288.0) & (original description: Putative BnaA09g23110D, Description = BnaA09g23110D protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 854.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03434_170181-173659' '(at4g15480 : 491.0) Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.; UGT84A1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7986 Blast hits to 7909 proteins in 477 species: Archae - 0; Bacteria - 354; Metazoa - 2305; Fungi - 71; Plants - 5077; Viruses - 110; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 210.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 86.1) no description available & (reliability: 982.0) & (original description: Putative GT2, Description = Cinnamate beta-D-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03438_284329-287675' '(at5g65550 : 184.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 161.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 334.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03536_130108-134527' '(at1g22360 : 177.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 131.0) no description available & (p56725|zox_phavu : 122.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 354.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03536_130195-134016' '(at1g22360 : 96.3) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03653_214666-222016' '(at5g67230 : 507.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 14-LIKE (IRX14-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G36890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36689 : 239.0) no description available & (gnl|cdd|48336 : 221.0) no description available & (reliability: 1014.0) & (original description: Putative IRX14H, Description = Probable beta-1,4-xylosyltransferase IRX14H, PFAM = PF03360)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03705_260633-269690' '(at1g31070 : 835.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 585.0) no description available & (gnl|cdd|34006 : 261.0) no description available & (reliability: 1654.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03706_381102-384160' '(at3g62660 : 450.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 900.0) & (original description: Putative PGSC0003DMG400031840, Description = Hexosyltransferase, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 314.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03723_290280-295992' '(at1g05170 : 633.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 418.0) no description available & (gnl|cdd|85659 : 172.0) no description available & (reliability: 1144.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF13334;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03772_145956-149977' '(at4g16745 : 606.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 313.0) no description available & (gnl|cdd|66673 : 216.0) no description available & (reliability: 1212.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03801_273516-283741' '(at4g38040 : 154.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 124.0) no description available & (gnl|cdd|66673 : 101.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG400015688, Description = Exostosin family protein, putative isoform 1, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03860_177664-180941' '(at2g38150 : 353.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 454 Blast hits to 450 proteins in 114 species: Archae - 0; Bacteria - 88; Metazoa - 237; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|37139 : 332.0) no description available & (gnl|cdd|68155 : 131.0) no description available & (reliability: 706.0) & (original description: Putative BnaA01g30130D, Description = BnaA01g30130D protein, PFAM = PF04572;PF04488)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03924_86726-89973' '(at5g61840 : 654.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 258.0) no description available & (gnl|cdd|66673 : 167.0) no description available & (reliability: 1308.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03969_191782-194344' '(at1g05530 : 118.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative 5GT, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03983_169854-173212' '(p56725|zox_phavu : 375.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 121.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 89.2) no description available & (reliability: 242.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04001_153539-160784' '(at3g57630 : 1214.0) exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66673 : 214.0) no description available & (gnl|cdd|36239 : 174.0) no description available & (reliability: 2428.0) & (original description: Putative BnaA09g36940D, Description = BnaA09g36940D protein, PFAM = PF07974;PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04187_134062-137462' '(at5g03490 : 459.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6070 Blast hits to 5962 proteins in 306 species: Archae - 0; Bacteria - 104; Metazoa - 824; Fungi - 18; Plants - 5054; Viruses - 30; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 172.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 918.0) & (original description: Putative UGT89A2, Description = UDP-glycosyltransferase 89A2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04192_60803-64862' '(at4g16745 : 613.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 314.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 1226.0) & (original description: Putative At5g20260, Description = Probable glycosyltransferase At5g20260, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04209_224792-228270' '(at5g59070 : 583.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30787 : 92.0) no description available & (reliability: 1166.0) & (original description: Putative GT4A1, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF13439;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04294_505845-512150' '(at4g38270 : 776.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 3 (GAUT3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1552.0) & (original description: Putative GAUT3, Description = Probable galacturonosyltransferase 3, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04337_163914-169292' '(at5g19670 : 702.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 340.0) no description available & (gnl|cdd|66673 : 217.0) no description available & (reliability: 1404.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04384_603835-607802' '(at1g61050 : 346.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|37139 : 328.0) no description available & (gnl|cdd|68155 : 143.0) no description available & (reliability: 692.0) & (original description: Putative BnaC01g39240D, Description = BnaC01g39240D protein, PFAM = PF04488;PF04572)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04404_161556-164980' '(p56725|zox_phavu : 452.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 194.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 388.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 360.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04477_213743-221693' '(at4g26940 : 180.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 729 Blast hits to 729 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 1; Plants - 429; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|37499 : 100.0) no description available & (reliability: 360.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04537_9133-22963' '(at4g01210 : 1139.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 2278.0) & (original description: Putative At4g01210, Description = Glycosyl transferase family 1 protein, PFAM = PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04607_789697-793064' '(at2g22900 : 552.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT4G37690.1); Has 459 Blast hits to 458 proteins in 96 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 139; Plants - 283; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 234.0) no description available & (gnl|cdd|69175 : 205.0) no description available & (reliability: 1104.0) & (original description: Putative GT7, Description = Putative glycosyltransferase 7, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04607_810473-813801' '(at4g37690 : 494.0) Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 218.0) no description available & (gnl|cdd|69175 : 189.0) no description available & (reliability: 988.0) & (original description: Putative GMGT2, Description = Putative galactomannan galactosyl transferase, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1144.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04886_471960-478461' '(at2g37585 : 482.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G15050.1); Has 846 Blast hits to 846 proteins in 95 species: Archae - 0; Bacteria - 25; Metazoa - 486; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|36018 : 288.0) no description available & (gnl|cdd|66199 : 238.0) no description available & (reliability: 964.0) & (original description: Putative GLCAT14C, Description = Beta-glucuronosyltransferase GlcAT14C, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04931_109554-112408' '(at5g62220 : 293.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 230.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 151.0) no description available & (gnl|cdd|66673 : 134.0) no description available & (reliability: 586.0) & (original description: Putative GT18, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 664.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04989_200663-205238' '(at4g27480 : 580.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 325.0) no description available & (gnl|cdd|66199 : 255.0) no description available & (reliability: 1160.0) & (original description: Putative GLCAT14A, Description = Beta-glucuronosyltransferase GlcAT14A, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05250_163698-173017' '(at1g06780 : 640.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 171.0) no description available & (reliability: 1280.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05308_214978-219917' '(at3g02100 : 402.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (q41819|iaag_maize : 163.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 99.2) no description available & (reliability: 804.0) & (original description: Putative UGT83A1, Description = UDP-glycosyltransferase 83A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05417_50291-54351' '(at1g63450 : 618.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 342.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 290.0) no description available & (gnl|cdd|66673 : 286.0) no description available & (reliability: 1236.0) & (original description: Putative GT16, Description = Xyloglucan-specific galacturonosyltransferase 1, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05764_78488-87429' '(at1g75420 : 611.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 323.0) no description available & (gnl|cdd|84842 : 81.9) no description available & (reliability: 1180.0) & (original description: Putative GT4A2, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF00534;PF16994)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05955_453178-461929' '(at1g78800 : 627.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink). & (gnl|cdd|36071 : 365.0) no description available & (gnl|cdd|30787 : 125.0) no description available & (reliability: 1254.0) & (original description: Putative alg2, Description = Alpha-1,3/1,6-mannosyltransferase ALG2, PFAM = PF00534;PF13439)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06233_200146-203871' '(at3g02100 : 411.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (q41819|iaag_maize : 157.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 88.8) no description available & (reliability: 822.0) & (original description: Putative UGT83A1, Description = UDP-glycosyltransferase 83A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06277_464966-468486' '(at5g59070 : 544.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30787 : 94.3) no description available & (reliability: 1088.0) & (original description: Putative BnaC06g23790D, Description = BnaC06g23790D protein, PFAM = PF00534;PF13439)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06280_138066-141151' '(at3g28340 : 490.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 938.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06344_38693-42120' '(at4g34131 : 530.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 234.0) no description available & (p56725|zox_phavu : 201.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.2) no description available & (reliability: 1060.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06374_118528-123791' '(at3g22250 : 450.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 6488 Blast hits to 6427 proteins in 402 species: Archae - 0; Bacteria - 208; Metazoa - 1301; Fungi - 24; Plants - 4818; Viruses - 90; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (q43641|ufog_solme : 138.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 108.0) no description available & (reliability: 900.0) & (original description: Putative UGT82A1, Description = UDP-glycosyltransferase 82A1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06388_383274-386755' '(at1g73880 : 512.0) UDP-glucosyl transferase 89B1 (UGT89B1); FUNCTIONS IN: in 7 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6052 Blast hits to 5982 proteins in 308 species: Archae - 0; Bacteria - 87; Metazoa - 884; Fungi - 31; Plants - 4945; Viruses - 61; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36406 : 199.0) no description available & (p56725|zox_phavu : 181.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 1024.0) & (original description: Putative UGT89B2, Description = UDP-glycosyltransferase 89B2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06408_561244-565227' '(at3g46670 : 386.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 171.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 772.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06441_224755-235099' '(at5g47780 : 831.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 4 (GAUT4); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 204.0) no description available & (reliability: 1662.0) & (original description: Putative GAUT4, Description = Probable galacturonosyltransferase 4, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06631_125743-131406' '(at3g15940 : 705.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 164.0) no description available & (gnl|cdd|30787 : 85.8) no description available & (reliability: 1410.0) & (original description: Putative 1g52420, Description = AT3g15940/MVC8_7, PFAM = PF16994;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06753_215039-218370' '(at4g22580 : 603.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 244.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 244.0) no description available & (gnl|cdd|66673 : 235.0) no description available & (reliability: 1206.0) & (original description: Putative GT19, Description = Probable xyloglucan galactosyltransferase GT19, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06778_601344-607574' '(at1g77810 : 526.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 154.0) no description available & (reliability: 958.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1026.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06942_222360-226740' '(at2g30140 : 461.0) UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G30150.1); Has 7928 Blast hits to 7876 proteins in 486 species: Archae - 0; Bacteria - 504; Metazoa - 2238; Fungi - 27; Plants - 5010; Viruses - 79; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 180.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 922.0) & (original description: Putative UGT87A2, Description = UDP-glycosyltransferase 87A2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06968_41145-46211' '(at4g16745 : 599.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 320.0) no description available & (gnl|cdd|66673 : 221.0) no description available & (reliability: 1198.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06996_260548-264721' '(at3g62660 : 411.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 822.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 376.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07089_278058-281237' '(p56725|zox_phavu : 426.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 196.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 82.7) no description available & (reliability: 392.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07191_287302-290699' '(at1g68470 : 516.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 782 Blast hits to 782 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 333.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 257.0) no description available & (gnl|cdd|66673 : 234.0) no description available & (reliability: 1032.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07231_123013-126362' '(at5g07720 : 748.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39945 : 385.0) no description available & (gnl|cdd|69175 : 226.0) no description available & (reliability: 1496.0) & (original description: Putative XXT3, Description = Probable xyloglucan 6-xylosyltransferase 3, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07247_34426-39114' '(at3g15350 : 627.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G53100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36018 : 338.0) no description available & (gnl|cdd|66199 : 267.0) no description available & (reliability: 1254.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07437_274686-277844' '(at1g70090 : 532.0) Encodes a protein with putative galacturonosyltransferase activity.; glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 193.0) no description available & (reliability: 1064.0) & (original description: Putative GATL9, Description = Probable galacturonosyltransferase-like 9, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07563_250606-253929' '(at4g34131 : 490.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 243.0) no description available & (p56725|zox_phavu : 179.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 980.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07579_279138-285608' '(at5g61840 : 740.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 263.0) no description available & (gnl|cdd|66673 : 167.0) no description available & (reliability: 1480.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07585_17143-23538' '(at1g22340 : 528.0) UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36406 : 227.0) no description available & (q41819|iaag_maize : 167.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1056.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07639_354106-362353' '(at2g44660 : 627.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT5G38460.2); Has 667 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 273; Fungi - 247; Plants - 67; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37787 : 469.0) no description available & (gnl|cdd|79991 : 324.0) no description available & (reliability: 1254.0) & (original description: Putative alg8, Description = Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07678_278173-285564' '(at3g58790 : 591.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 15 (GAUT15); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1513 Blast hits to 1502 proteins in 296 species: Archae - 0; Bacteria - 573; Metazoa - 140; Fungi - 8; Plants - 775; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 164.0) no description available & (reliability: 1182.0) & (original description: Putative GAUT15, Description = Probable galacturonosyltransferase 15, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07695_73177-78805' '(at4g38040 : 209.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 182.0) no description available & (gnl|cdd|66673 : 147.0) no description available & (reliability: 418.0) & (original description: Putative GT47C6-1, Description = Glycosyltransferase-like protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07736_251615-255471' '(at1g63450 : 591.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 353.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 291.0) no description available & (gnl|cdd|36239 : 286.0) no description available & (reliability: 1182.0) & (original description: Putative GT20, Description = Probable xyloglucan galactosyltransferase GT20, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08002_153823-160687' '(at3g01040 : 816.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1632.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08142_62954-66417' '(at1g73160 : 627.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 13084 Blast hits to 13074 proteins in 2221 species: Archae - 678; Bacteria - 10413; Metazoa - 93; Fungi - 132; Plants - 161; Viruses - 0; Other Eukaryotes - 1607 (source: NCBI BLink). & (gnl|cdd|30787 : 108.0) no description available & (gnl|cdd|36327 : 90.3) no description available & (reliability: 1254.0) & (original description: Putative GT4A1, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF13439;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08198_34144-40123' '(at3g15940 : 691.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 162.0) no description available & (gnl|cdd|30787 : 84.3) no description available & (reliability: 1382.0) & (original description: Putative 1g52420, Description = Putative glycosyltransferase ypjH, PFAM = PF16994;PF00534)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08280_96665-101551' '(at4g16710 : 237.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 196.0) no description available & (gnl|cdd|86543 : 115.0) no description available & (reliability: 474.0) & (original description: Putative alg13, Description = MGC84616 protein, PFAM = PF04101)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08355_227206-235122' '(at4g38040 : 657.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 270.0) no description available & (gnl|cdd|66673 : 228.0) no description available & (reliability: 1314.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08467_380719-385952' '(at1g22360 : 308.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 207.0) no description available & (p16165|ufo2_maize : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-Mc2 allele) - Zea mays (Maize) & (gnl|cdd|79510 : 106.0) no description available & (reliability: 616.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08549_187200-200266' '(at1g22400 : 276.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (p56725|zox_phavu : 154.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 542.0) & (original description: Putative PNGT2, Description = Uncharacterized glucosyltransferase 2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08835_95983-102728' '(at1g22370 : 187.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 113.0) no description available & (q41819|iaag_maize : 84.3) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 374.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09016_25542-43186' '(at5g15050 : 289.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 187.0) no description available & (gnl|cdd|66199 : 165.0) no description available & (reliability: 578.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 302.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09372_34614-41856' '(at5g38460 : 581.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT2G44660.1). & (gnl|cdd|37786 : 505.0) no description available & (gnl|cdd|79991 : 351.0) no description available & (reliability: 1162.0) & (original description: Putative alg6, Description = Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09445_163884-168851' '(at5g25820 : 587.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G32790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 322.0) no description available & (gnl|cdd|66673 : 224.0) no description available & (reliability: 1174.0) & (original description: Putative At5g25820, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09445_190895-195574' '(at4g32790 : 530.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1344 Blast hits to 1329 proteins in 116 species: Archae - 0; Bacteria - 12; Metazoa - 289; Fungi - 4; Plants - 927; Viruses - 5; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|36239 : 320.0) no description available & (gnl|cdd|66673 : 212.0) no description available & (reliability: 1060.0) & (original description: Putative BnaC09g44990D, Description = BnaC09g44990D protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09554_99272-105941' '(at3g01040 : 798.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 1596.0) & (original description: Putative GAUT14, Description = Probable galacturonosyltransferase 14, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09773_125974-135251' '(at2g39630 : 509.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 353.0) no description available & (gnl|cdd|84843 : 88.3) no description available & (reliability: 1018.0) & (original description: Putative ALG5, Description = Dolichyl-phosphate beta-glucosyltransferase, PFAM = PF00535)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09791_50340-53377' '(at3g50760 : 464.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 928.0) & (original description: Putative PGSC0003DMG400010088, Description = Hexosyltransferase, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_11856-15632' '(at1g05680 : 388.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 293.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 202.0) no description available & (gnl|cdd|79510 : 118.0) no description available & (reliability: 762.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_212562-216935' '(at1g05680 : 318.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 236.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 176.0) no description available & (gnl|cdd|79510 : 113.0) no description available & (reliability: 622.0) & (original description: Putative PGT, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_212586-216989' '(at1g05680 : 403.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 315.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 196.0) no description available & (gnl|cdd|79510 : 114.0) no description available & (reliability: 794.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf10328_48815-57609' '(at4g38040 : 280.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 203.0) no description available & (gnl|cdd|66673 : 162.0) no description available & (reliability: 560.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf10328_83018-97196' '(at4g38040 : 271.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 194.0) no description available & (gnl|cdd|66673 : 160.0) no description available & (reliability: 542.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 382.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 354.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11154_32127-37012' '(at4g16710 : 246.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 194.0) no description available & (gnl|cdd|86543 : 112.0) no description available & (reliability: 492.0) & (original description: Putative alg13, Description = MGC84616 protein, PFAM = PF04101)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11183_40495-43967' '(at3g53150 : 607.0) UDP-glucosyl transferase 73D1 (UGT73D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7415 Blast hits to 7339 proteins in 377 species: Archae - 0; Bacteria - 180; Metazoa - 2057; Fungi - 21; Plants - 5064; Viruses - 36; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 239.0) no description available & (p56725|zox_phavu : 167.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1214.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11469_16054-19847' '(at2g29040 : 548.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 528.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 306.0) no description available & (reliability: 1096.0) & (original description: Putative Os03g0144800, Description = Xyloglucan galactosyltransferase KATAMARI1 homolog, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11980_383750-389132' '(at1g71070 : 545.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 274.0) no description available & (gnl|cdd|66199 : 235.0) no description available & (reliability: 1090.0) & (original description: Putative pco120288, Description = BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 362.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 328.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 900.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12858_157672-174303' '(at1g21480 : 720.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 178.0) no description available & (gnl|cdd|66673 : 132.0) no description available & (reliability: 1440.0) & (original description: Putative At1g21480, Description = Exostosin family protein, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12858_159075-174221' '(at1g21480 : 433.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 99.0) no description available & (reliability: 866.0) & (original description: Putative LOC100192822, Description = Glycosyltransferase, family GT47, PFAM = PF03016)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12919_56571-60157' '(at4g34131 : 503.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p56725|zox_phavu : 186.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.1) no description available & (reliability: 1006.0) & (original description: Putative gt5, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12919_165422-168849' '(at4g34131 : 535.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 229.0) no description available & (p56725|zox_phavu : 202.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 1070.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf13179_11088-14437' '(at5g07720 : 743.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39945 : 393.0) no description available & (gnl|cdd|69175 : 230.0) no description available & (reliability: 1486.0) & (original description: Putative XXT3, Description = Probable xyloglucan 6-xylosyltransferase 3, PFAM = PF05637)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 836.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf14996_105772-109163' '(at1g73880 : 409.0) UDP-glucosyl transferase 89B1 (UGT89B1); FUNCTIONS IN: in 7 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6052 Blast hits to 5982 proteins in 308 species: Archae - 0; Bacteria - 87; Metazoa - 884; Fungi - 31; Plants - 4945; Viruses - 61; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36406 : 184.0) no description available & (q8rxa5|czog2_maize : 153.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (reliability: 818.0) & (original description: Putative UGT89B2, Description = UDP-glycosyltransferase 89B2, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf15870_73266-79395' '(at5g04500 : 950.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 605.0) no description available & (gnl|cdd|72674 : 279.0) no description available & (reliability: 1900.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf16733_199052-204833' '(at1g18580 : 823.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 185.0) no description available & (reliability: 1646.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 324.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf18061_95304-98395' '(at3g50760 : 471.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 942.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf22566_49386-55715' '(at4g27480 : 566.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 316.0) no description available & (gnl|cdd|66199 : 250.0) no description available & (reliability: 1132.0) & (original description: Putative GnT, Description = N-acetylglucosaminyltransferase, PFAM = PF02485)' T
'26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf27793_53919-59921' '(at1g22380 : 352.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 704.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold5910_39008-42953' '(at3g18080 : 764.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 646.0) no description available & (gnl|cdd|84629 : 490.0) no description available & (p49235|bglc_maize : 369.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1528.0) & (original description: Putative BGLU44, Description = Beta-glucosidase 44, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold34985_4601-16903' '(gnl|cdd|35845 : 628.0) no description available & (at1g02850 : 598.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 458.0) no description available & (p29092|myr3_sinal : 335.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1196.0) & (original description: Putative BGLU11, Description = Beta-glucosidase 11, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold38022_1557-8324' '(at4g28320 : 416.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G20680.1); Has 750 Blast hits to 740 proteins in 186 species: Archae - 6; Bacteria - 225; Metazoa - 0; Fungi - 183; Plants - 306; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 106.0) no description available & (reliability: 832.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold52188_2552-10547' '(at5g20950 : 959.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1778.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold2065_109195-119909' '(at5g36890 : 542.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 525.0) no description available & (gnl|cdd|84629 : 410.0) no description available & (p49235|bglc_maize : 313.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1084.0) & (original description: Putative AH1, Description = Beta-glucosidase, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold3026_264519-270870' '(at5g04885 : 865.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1730.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF01915;PF00933)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold6004_113193-118883' '(q5h7p5|ebm_lillo : 439.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 417.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative ebm, Description = Glycosyl hydrolase, PFAM = )' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold6491_41185-52701' '(at3g06510 : 824.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 223.0) no description available & (gnl|cdd|32615 : 218.0) no description available & (p49235|bglc_maize : 118.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1648.0) & (original description: Putative sfr2, Description = Putative beta-glycosidase, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00001654ctg000_11897-16773' '(at5g66460 : 249.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 84.3) no description available & (reliability: 496.0) & (original description: Putative MAN6, Description = Endo-beta-1,4-mannanase, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00009379ctg008_6619-19968' '(q5h7p5|ebm_lillo : 1028.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 990.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|33061 : 125.0) no description available & (gnl|cdd|37441 : 105.0) no description available & (reliability: 1980.0) & (original description: Putative ebm, Description = Mannosylglycoprotein endo-beta-mannosidase, PFAM = PF02836;PF00703)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00009835ctg003_1-8106' '(at5g36890 : 518.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 478.0) no description available & (gnl|cdd|84629 : 353.0) no description available & (p49235|bglc_maize : 299.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1036.0) & (original description: Putative BG1, Description = Beta-glucosidase, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00011140ctg006_11842-18139' '(at5g20950 : 958.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 263.0) no description available & (reliability: 1726.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00018150ctg009_1538-3978' '(at4g21760 : 94.4) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 86.8) no description available & (gnl|cdd|35845 : 86.5) no description available & (reliability: 188.8) & (original description: Putative bglC, Description = Beta-glucosidase, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00024745ctg007_8005-13474' '(at5g04885 : 860.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 251.0) no description available & (reliability: 1720.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 574.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00027738ctg002_8436-12483' '(at1g18650 : 111.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 208.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1204.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00031468ctg002_1588-4319' '(at5g43710 : 111.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative MNS4, Description = alpha-1,2-Mannosidase, PFAM = )' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00038474ctg001_6759-13979' '(at3g06510 : 645.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 208.0) no description available & (gnl|cdd|32615 : 182.0) no description available & (p49235|bglc_maize : 99.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1290.0) & (original description: Putative sfr2, Description = Beta-glucosidase-like SFR2, chloroplastic, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00038474ctg003_1-1811' '(at3g06510 : 135.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative sfr2, Description = Putative beta-glycosidase, PFAM = )' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00057981ctg003_1-5835' '(at2g20680 : 644.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 113.0) no description available & (reliability: 1288.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101ctg16306_1074-6521' '(gnl|cdd|35845 : 587.0) no description available & (at1g61810 : 515.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 450.0) no description available & (p49235|bglc_maize : 352.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1030.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00168_958291-1002938' '(at3g54440 : 1580.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781). & (gnl|cdd|83064 : 916.0) no description available & (reliability: 3160.0) & (original description: Putative At3g54440, Description = Glycoside hydrolase family 2 protein, PFAM = PF16353;PF02929;PF00703;PF02836;PF02837)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00283_399742-408240' '(at1g16610 : 124.0) Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth.; arginine/serine-rich 45 (SR45); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich protein-related (TAIR:AT1G79100.1). & (reliability: 248.0) & (original description: Putative SR45, Description = Arginine/serine-rich 45 protein, PFAM = PF00076)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_128199-155258' '(at5g43710 : 845.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37640 : 644.0) no description available & (gnl|cdd|85516 : 381.0) no description available & (reliability: 1690.0) & (original description: Putative MNS4, Description = Alpha-mannosidase I MNS4, PFAM = PF01532;PF01532)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_128994-131303' '(at5g43710 : 130.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37640 : 111.0) no description available & (gnl|cdd|85516 : 89.9) no description available & (reliability: 260.0) & (original description: Putative edem2, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_568477-576548' '(at5g20950 : 621.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 160.0) no description available & (reliability: 1164.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00339_905367-910626' '(at1g02850 : 627.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 623.0) no description available & (gnl|cdd|84629 : 440.0) no description available & (p29092|myr3_sinal : 347.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1254.0) & (original description: Putative BGLU11, Description = Beta-glucosidase 11, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00426_276463-285784' '(at4g28320 : 400.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G20680.1); Has 750 Blast hits to 740 proteins in 186 species: Archae - 6; Bacteria - 225; Metazoa - 0; Fungi - 183; Plants - 306; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 98.9) no description available & (reliability: 800.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00451_331640-343593' '(at5g36890 : 692.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 653.0) no description available & (gnl|cdd|84629 : 514.0) no description available & (p49235|bglc_maize : 399.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1384.0) & (original description: Putative BGLU42, Description = Beta-glucosidase 42, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00635_589644-634000' '(at1g26560 : 709.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 687.0) no description available & (gnl|cdd|84629 : 495.0) no description available & (p49235|bglc_maize : 365.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1418.0) & (original description: Putative BGLU6, Description = Beta-glucosidase 6, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00856_114462-128637' '(at5g04885 : 956.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 249.0) no description available & (reliability: 1912.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00905_1416647-1423698' '(at2g20680 : 644.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 113.0) no description available & (reliability: 1288.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01181_150173-155011' '(at3g18080 : 750.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 650.0) no description available & (gnl|cdd|84629 : 500.0) no description available & (p49235|bglc_maize : 364.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1500.0) & (original description: Putative BGLU44, Description = Beta-glucosidase 44, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01373_93900-99248' '(gnl|cdd|35845 : 591.0) no description available & (at1g61810 : 516.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 454.0) no description available & (p49235|bglc_maize : 348.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1032.0) & (original description: Putative BGLU14, Description = Probable inactive beta-glucosidase 14, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01373_270582-310783' '(gnl|cdd|35845 : 603.0) no description available & (at1g61810 : 512.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 469.0) no description available & (p49235|bglc_maize : 367.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1024.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_499219-515669' '(gnl|cdd|35845 : 713.0) no description available & (at2g44480 : 617.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 515.0) no description available & (p49235|bglc_maize : 469.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1234.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_1017182-1027214' '(gnl|cdd|35845 : 698.0) no description available & (at2g44480 : 563.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 494.0) no description available & (p49235|bglc_maize : 455.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1126.0) & (original description: Putative BGLU12, Description = Beta-glucosidase 12, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_1022744-1026801' '(gnl|cdd|35845 : 361.0) no description available & (at2g44480 : 303.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00326|myro_brana : 241.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (gnl|cdd|84629 : 235.0) no description available & (reliability: 606.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02401_265259-273693' '(at3g18080 : 753.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 655.0) no description available & (gnl|cdd|84629 : 495.0) no description available & (p49235|bglc_maize : 379.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1506.0) & (original description: Putative BGLU43, Description = Beta-glucosidase 43, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03010_590304-602990' '(gnl|cdd|35845 : 652.0) no description available & (at4g21760 : 589.0) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 490.0) no description available & (p49235|bglc_maize : 383.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1178.0) & (original description: Putative BGLU47, Description = Beta-glucosidase 47, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03045_167542-177011' '(gnl|cdd|35845 : 623.0) no description available & (at1g61820 : 570.0) beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84629 : 469.0) no description available & (q00326|myro_brana : 348.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1140.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03321_485897-537492' '(at3g54440 : 1568.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781). & (gnl|cdd|83064 : 911.0) no description available & (reliability: 3136.0) & (original description: Putative At3g54440, Description = Glycoside hydrolase family 2 protein, PFAM = PF02929;PF02837;PF16353;PF00703;PF02836)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03840_45803-51854' '(at3g06510 : 402.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 155.0) no description available & (gnl|cdd|32615 : 128.0) no description available & (reliability: 804.0) & (original description: Putative SFR, Description = Putative beta-glycosidase, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf04071_552915-568969' '(gnl|cdd|35845 : 673.0) no description available & (at2g44480 : 548.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 496.0) no description available & (p49235|bglc_maize : 447.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1096.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf04992_347354-353452' '(at2g20680 : 662.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 115.0) no description available & (reliability: 1324.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05413_177455-183013' '(at5g54570 : 746.0) beta glucosidase 41 (BGLU41); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35845 : 678.0) no description available & (gnl|cdd|84629 : 503.0) no description available & (p49235|bglc_maize : 394.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1492.0) & (original description: Putative BGLU41, Description = Putative beta-glucosidase 41, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05588_640668-647428' '(at5g20950 : 989.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1794.0) & (original description: Putative BGL, Description = Beta-glucosidase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05588_826642-833218' '(at5g20950 : 951.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 246.0) no description available & (reliability: 1750.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05601_94253-103450' '(gnl|cdd|35845 : 599.0) no description available & (at4g21760 : 580.0) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 459.0) no description available & (q00326|myro_brana : 337.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1160.0) & (original description: Putative Sb06g022490, Description = Putative uncharacterized protein Sb06g022490, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05621_34280-77701' '(at1g67490 : 1072.0) Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).; glucosidase 1 (GCS1); FUNCTIONS IN: alpha-glucosidase activity; INVOLVED IN: root epidermal cell differentiation, epidermal cell differentiation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Six-hairpin glycosidases superfamily protein (TAIR:AT1G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86272 : 845.0) no description available & (gnl|cdd|37372 : 763.0) no description available & (reliability: 2144.0) & (original description: Putative GCS1, Description = Mannosyl-oligosaccharide glucosidase GCS1, PFAM = PF03200;PF16923)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf06775_69948-79469' '(at5g20950 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1774.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1200.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf09127_4968-18317' '(q5h7p5|ebm_lillo : 1461.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 1400.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|33061 : 158.0) no description available & (gnl|cdd|37441 : 140.0) no description available & (reliability: 2800.0) & (original description: Putative EBM, Description = Mannosylglycoprotein endo-beta-mannosidase, PFAM = PF02836;PF00703)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf09698_79828-91472' '(at5g20950 : 887.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1758.0) & (original description: Putative BG, Description = Endo-alpha-1,4-glucanase, PFAM = PF01915;PF00933)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf11389_214142-221934' '(at1g26560 : 777.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 718.0) no description available & (gnl|cdd|84629 : 514.0) no description available & (q00326|myro_brana : 424.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1554.0) & (original description: Putative BGLU40, Description = Beta-glucosidase 40, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf12422_74921-82892' '(at1g27520 : 858.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT5G43710.1); Has 2179 Blast hits to 1853 proteins in 199 species: Archae - 0; Bacteria - 11; Metazoa - 788; Fungi - 990; Plants - 198; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37640 : 667.0) no description available & (gnl|cdd|85516 : 409.0) no description available & (reliability: 1716.0) & (original description: Putative MNS5, Description = Alpha-mannosidase I MNS5, PFAM = PF01532)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf12422_76328-78098' '(at1g27520 : 122.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT5G43710.1); Has 2179 Blast hits to 1853 proteins in 199 species: Archae - 0; Bacteria - 11; Metazoa - 788; Fungi - 990; Plants - 198; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37640 : 109.0) no description available & (gnl|cdd|85516 : 87.6) no description available & (reliability: 244.0) & (original description: Putative MNS5, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf13289_312750-319422' '(at5g20950 : 961.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 261.0) no description available & (reliability: 1740.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf18152_53104-60027' '(gnl|cdd|35845 : 619.0) no description available & (at1g61820 : 573.0) beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84629 : 475.0) no description available & (p49235|bglc_maize : 373.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1146.0) & (original description: Putative Sb06g022500, Description = Putative uncharacterized protein Sb06g022500, PFAM = PF00232)' T
'26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf21459_165668-171437' '(gnl|cdd|35845 : 608.0) no description available & (at1g02850 : 605.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 427.0) no description available & (p29092|myr3_sinal : 352.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1210.0) & (original description: Putative BGLU2, Description = Beta-glucosidase 2, PFAM = PF00232)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'nbv0.3scaffold44372_5710-17440' '(at5g63840 : 1385.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 1177.0) no description available & (gnl|cdd|85212 : 550.0) no description available & (q653v7|aglu_orysa : 311.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 2770.0) & (original description: Putative PSL5, Description = Probable glucan 1,3-alpha-glucosidase, PFAM = PF01055;PF13802)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben044scf00016012ctg002_1974-4135' '(o04893|aglu_spiol : 342.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (at5g11720 : 326.0) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36283 : 210.0) no description available & (gnl|cdd|85212 : 196.0) no description available & (reliability: 652.0) & (original description: Putative gaa, Description = Alpha-glucosidase, PFAM = PF01055)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben044scf00056997ctg001_105-3897' '(at1g68560 : 415.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (gnl|cdd|36283 : 247.0) no description available & (q653v7|aglu_orysa : 237.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative agdC, Description = Alpha-glucosidase, PFAM = PF01055;PF16863;PF13802)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf00239_520365-555771' '(at3g23640 : 1533.0) heteroglycan glucosidase 1 (HGL1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT5G63840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85212 : 487.0) no description available & (gnl|cdd|36284 : 420.0) no description available & (q653v7|aglu_orysa : 307.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 3066.0) & (original description: Putative BnaCnng35950D, Description = BnaCnng35950D protein, PFAM = PF17137;PF01055;PF13802)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf00753_12778-22764' '(at1g68560 : 1444.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (q653v7|aglu_orysa : 818.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (gnl|cdd|36283 : 813.0) no description available & (gnl|cdd|85212 : 548.0) no description available & (reliability: 2888.0) & (original description: Putative mal2, Description = Alpha-glucosidase, PFAM = PF01055;PF16863;PF13802)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf02243_670356-675968' '(gnl|cdd|77801 : 652.0) no description available & (gnl|cdd|36283 : 124.0) no description available & (at3g45940 : 86.7) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 5440 Blast hits to 5077 proteins in 1113 species: Archae - 86; Bacteria - 3115; Metazoa - 813; Fungi - 823; Plants - 272; Viruses - 2; Other Eukaryotes - 329 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Os01g0268600, Description = Alpha-glucosidase-like, PFAM = PF01055)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf03565_806124-814735' '(at5g63840 : 632.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 554.0) no description available & (gnl|cdd|85212 : 335.0) no description available & (q653v7|aglu_orysa : 210.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative zgc:171967, Description = Zgc:171967 protein, PFAM = PF01055)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf04487_200710-214884' '(at5g63840 : 1411.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 1184.0) no description available & (gnl|cdd|85212 : 552.0) no description available & (q653v7|aglu_orysa : 310.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 2822.0) & (original description: Putative PSL5, Description = Probable glucan 1,3-alpha-glucosidase, PFAM = PF01055;PF13802)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf04998_227611-237493' '(at1g68560 : 1435.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (o04893|aglu_spiol : 823.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (gnl|cdd|36283 : 810.0) no description available & (gnl|cdd|85212 : 560.0) no description available & (reliability: 2870.0) & (original description: Putative mal2, Description = Alpha-glucosidase, PFAM = PF16863;PF01055)' T
'26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf26939_51349-58289' '(at5g11720 : 1162.0) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04893|aglu_spiol : 1130.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (gnl|cdd|36283 : 786.0) no description available & (gnl|cdd|85212 : 585.0) no description available & (reliability: 2324.0) & (original description: Putative agdA, Description = Alpha-glucosidase, PFAM = PF16863;PF01055;PF13802)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.3scaffold31079_3060-11616' '(p48981|bgal_maldo : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1076.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2152.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.3scaffold63813_1713-9438' '(at2g28470 : 1225.0) putative beta-galactosidase (BGAL8 gene); beta-galactosidase 8 (BGAL8); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1). & (p45582|bgal_aspof : 939.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 781.0) no description available & (gnl|cdd|85374 : 450.0) no description available & (reliability: 2450.0) & (original description: Putative BGAL8, Description = Beta-galactosidase 8, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold235_75413-97481' '(at2g28470 : 974.0) putative beta-galactosidase (BGAL8 gene); beta-galactosidase 8 (BGAL8); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1). & (p45582|bgal_aspof : 861.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 700.0) no description available & (gnl|cdd|85374 : 418.0) no description available & (reliability: 1948.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold573_111591-151875' '(at1g77410 : 969.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 744.0) no description available & (p45582|bgal_aspof : 696.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 410.0) no description available & (reliability: 1938.0) & (original description: Putative BGAL16, Description = Beta-galactosidase 16, PFAM = PF13364;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold738_113210-129979' '(at5g63810 : 1079.0) member of Glycoside Hydrolase Family 35; beta-galactosidase 10 (BGAL10); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2086 Blast hits to 2065 proteins in 466 species: Archae - 15; Bacteria - 851; Metazoa - 358; Fungi - 207; Plants - 597; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p45582|bgal_aspof : 887.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 737.0) no description available & (gnl|cdd|85374 : 426.0) no description available & (reliability: 2158.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold8744_4795-26494' '(at2g32810 : 1229.0) putative beta-galactosidase; beta galactosidase 9 (BGAL9); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1). & (p45582|bgal_aspof : 770.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 650.0) no description available & (gnl|cdd|85374 : 378.0) no description available & (reliability: 2458.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben044scf00010494ctg011_1-2599' '(p45582|bgal_aspof : 357.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at3g13750 : 350.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 167.0) no description available & (gnl|cdd|85885 : 117.0) no description available & (reliability: 700.0) & (original description: Putative GAL5, Description = Beta-galactosidase, PFAM = PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben044scf00012766ctg000_1436-9139' '(at4g36360 : 1439.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 1112.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 836.0) no description available & (gnl|cdd|85374 : 444.0) no description available & (reliability: 2878.0) & (original description: Putative BGAL3, Description = Beta-galactosidase 3, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf00422_194493-206257' '(p48981|bgal_maldo : 1095.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1065.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2130.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01304_160834-169020' '(at3g13750 : 1386.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1266.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 866.0) no description available & (gnl|cdd|85374 : 440.0) no description available & (reliability: 2772.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01505_294543-323513' '(at1g72990 : 892.0) beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35717 : 521.0) no description available & (gnl|cdd|85374 : 406.0) no description available & (p48981|bgal_maldo : 171.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 1784.0) & (original description: Putative BGAL17, Description = Beta-galactosidase 17, PFAM = PF01301;PF13364)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01563_431537-442850' '(at1g31740 : 86.7) Encodes a putative β-galactosidase.; beta-galactosidase 15 (BGAL15); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 7 (TAIR:AT5G20710.1); Has 2176 Blast hits to 2100 proteins in 470 species: Archae - 15; Bacteria - 883; Metazoa - 370; Fungi - 212; Plants - 619; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|35717 : 81.1) no description available & (reliability: 173.4) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01888_1003461-1018215' '(at1g77410 : 919.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 733.0) no description available & (p45582|bgal_aspof : 672.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 403.0) no description available & (reliability: 1838.0) & (original description: Putative BGAL16, Description = Beta-galactosidase 16, PFAM = PF13364;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01888_1019728-1023303' '(at1g77410 : 243.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 178.0) no description available & (p48981|bgal_maldo : 151.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 486.0) & (original description: Putative gal, Description = Beta-galactosidase, PFAM = PF13364)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02025_351904-359497' '(at2g16730 : 1001.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 744.0) no description available & (p45582|bgal_aspof : 661.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 416.0) no description available & (reliability: 2002.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02236_12255-19286' '(at3g13750 : 1209.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1196.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 821.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2418.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02363_65581-73033' '(at3g13750 : 1362.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1254.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 865.0) no description available & (gnl|cdd|85374 : 436.0) no description available & (reliability: 2724.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02621_303841-313957' '(at2g16730 : 975.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 724.0) no description available & (p45582|bgal_aspof : 649.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 410.0) no description available & (reliability: 1950.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02658_305971-313840' '(at2g16730 : 943.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 727.0) no description available & (p45582|bgal_aspof : 620.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 413.0) no description available & (reliability: 1886.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF02140;PF01301;PF13364)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05272_326627-335380' '(at3g13750 : 1361.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1250.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 854.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2722.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05713_30234-47400' '(at2g32810 : 1295.0) putative beta-galactosidase; beta galactosidase 9 (BGAL9); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1). & (p45582|bgal_aspof : 837.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 722.0) no description available & (gnl|cdd|85374 : 408.0) no description available & (reliability: 2590.0) & (original description: Putative BGAL9, Description = Beta-galactosidase 9, PFAM = PF01301;PF02140;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05764_516484-524446' '(at4g36360 : 1436.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 838.0) no description available & (gnl|cdd|85374 : 443.0) no description available & (reliability: 2872.0) & (original description: Putative BGAL3, Description = Beta-galactosidase 3, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf06106_185554-193646' '(at2g16730 : 941.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 728.0) no description available & (p45582|bgal_aspof : 620.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 416.0) no description available & (reliability: 1882.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF01301;PF02140;PF13364)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf07027_397990-400622' '(p45582|bgal_aspof : 100.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at1g45130 : 99.4) beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|35717 : 93.8) no description available & (gnl|cdd|85374 : 81.0) no description available & (reliability: 198.8) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf08651_434984-443417' '(at5g20710 : 1134.0) beta-galactosidase 7 (BGAL7); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 15 (TAIR:AT1G31740.1); Has 2182 Blast hits to 2117 proteins in 479 species: Archae - 16; Bacteria - 866; Metazoa - 388; Fungi - 212; Plants - 616; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (p49676|bgal_braol : 1130.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (gnl|cdd|35717 : 693.0) no description available & (gnl|cdd|85374 : 427.0) no description available & (reliability: 2268.0) & (original description: Putative BGAL15, Description = Beta-galactosidase 15, PFAM = PF01301;PF02140)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10213_53088-60484' '(at3g13750 : 1360.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1252.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 862.0) no description available & (gnl|cdd|85374 : 434.0) no description available & (reliability: 2720.0) & (original description: Putative BGAL12, Description = Beta-galactosidase 12, PFAM = PF02140;PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10490_82038-88897' '(at4g36360 : 1133.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 998.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 802.0) no description available & (gnl|cdd|85374 : 445.0) no description available & (reliability: 2266.0) & (original description: Putative BGAL5, Description = Beta-galactosidase 5, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10889_256826-273789' '(at4g36360 : 1146.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 989.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 816.0) no description available & (gnl|cdd|85374 : 448.0) no description available & (reliability: 2292.0) & (original description: Putative BGAL5, Description = Beta-galactosidase 5, PFAM = PF01301)' T
'26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf20935_65304-71552' '(at5g20710 : 861.0) beta-galactosidase 7 (BGAL7); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 15 (TAIR:AT1G31740.1); Has 2182 Blast hits to 2117 proteins in 479 species: Archae - 16; Bacteria - 866; Metazoa - 388; Fungi - 212; Plants - 616; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (p49676|bgal_braol : 850.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (gnl|cdd|35717 : 643.0) no description available & (gnl|cdd|85374 : 404.0) no description available & (reliability: 1722.0) & (original description: Putative BGAL7, Description = Beta-galactosidase 7, PFAM = PF01301)' T
'26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf00153_138906-154247' '(at5g13980 : 1428.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT3G26720.1); Has 1157 Blast hits to 1109 proteins in 192 species: Archae - 7; Bacteria - 147; Metazoa - 691; Fungi - 22; Plants - 155; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37170 : 1265.0) no description available & (gnl|cdd|85226 : 274.0) no description available & (reliability: 2856.0) & (original description: Putative At5g13980, Description = Probable alpha-mannosidase At5g13980, PFAM = PF01074;PF09261;PF07748)' T
'26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf01664_3500-14324' '(at5g66150 : 556.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37170 : 507.0) no description available & (gnl|cdd|87365 : 186.0) no description available & (reliability: 1112.0) & (original description: Putative MAN, Description = Alpha-mannosidase, PFAM = PF07748;PF07748)' T
'26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf07250_461254-472879' '(at5g66150 : 1387.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37170 : 1269.0) no description available & (gnl|cdd|85226 : 274.0) no description available & (reliability: 2774.0) & (original description: Putative MAN, Description = Alpha-mannosidase, PFAM = PF09261;PF07748;PF01074)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold7947_5994-13019' '(at1g64390 : 905.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q6l4i2|gun15_orysa : 744.0) Endoglucanase 15 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 15) - Oryza sativa (Rice) & (gnl|cdd|85009 : 570.0) no description available & (reliability: 1810.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759;PF09478)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold18061_8993-15066' '(at1g48930 : 769.0) glycosyl hydrolase 9C1 (GH9C1); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1873 Blast hits to 1853 proteins in 259 species: Archae - 2; Bacteria - 684; Metazoa - 175; Fungi - 17; Plants - 924; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q259h9|gun13_orysa : 684.0) Endoglucanase 13 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 13) (OsGLU6) - Oryza sativa (Rice) & (gnl|cdd|85009 : 535.0) no description available & (reliability: 1538.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF09478;PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold31157_6369-14168' '(at1g64390 : 915.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 737.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 564.0) no description available & (reliability: 1830.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF00759;PF09478)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold34244_18668-22499' '(at4g02290 : 773.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 711.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 603.0) no description available & (reliability: 1546.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben044scf00028575ctg004_31309-35981' '(q7xuk4|gun12_orysa : 375.0) Endoglucanase 12 (EC 3.2.1.4) (Endo-1,4-beta glucanase 12) (OsGLU3) - Oryza sativa (Rice) & (at1g65610 : 360.0) KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 353.0) no description available & (reliability: 720.0) & (original description: Putative CEL, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf00148_137200-141433' '(at1g70710 : 530.0) endo-1,4-beta-glucanase. Involved in cell elongation.; glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 512.0) no description available & (q652f9|gun17_orysa : 510.0) Endoglucanase 17 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 17) (OsGLU13) - Oryza sativa (Rice) & (reliability: 1060.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01184_1647446-1652520' '(at1g71380 : 662.0) cellulase 3 (CEL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 5 (TAIR:AT1G22880.1); Has 1752 Blast hits to 1741 proteins in 250 species: Archae - 2; Bacteria - 607; Metazoa - 172; Fungi - 17; Plants - 917; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|85009 : 568.0) no description available & (q7xth4|gun11_orysa : 559.0) Endoglucanase 11 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 11) (OsGLU4) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01435_67864-72637' '(q6yxt7|gun19_orysa : 645.0) Endoglucanase 19 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 19) - Oryza sativa (Rice) & (at4g02290 : 611.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|85009 : 573.0) no description available & (reliability: 1222.0) & (original description: Putative CEL1, Description = Endoglucanase 1, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01623_181183-187639' '(at4g02290 : 775.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 719.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 603.0) no description available & (reliability: 1550.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf04567_182737-189043' '(at1g48930 : 786.0) glycosyl hydrolase 9C1 (GH9C1); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1873 Blast hits to 1853 proteins in 259 species: Archae - 2; Bacteria - 684; Metazoa - 175; Fungi - 17; Plants - 924; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q259h9|gun13_orysa : 697.0) Endoglucanase 13 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 13) (OsGLU6) - Oryza sativa (Rice) & (gnl|cdd|85009 : 538.0) no description available & (reliability: 1572.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759;PF09478)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf06267_302543-307717' '(q69sg5|gun24_orysa : 627.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (at1g19940 : 606.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 466.0) no description available & (reliability: 1188.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf06529_755097-761876' '(at1g64390 : 925.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 750.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 566.0) no description available & (reliability: 1850.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF09478;PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf07850_405286-414394' '(at1g70710 : 761.0) endo-1,4-beta-glucanase. Involved in cell elongation.; glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (q652f9|gun17_orysa : 708.0) Endoglucanase 17 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 17) (OsGLU13) - Oryza sativa (Rice) & (gnl|cdd|85009 : 554.0) no description available & (reliability: 1522.0) & (original description: Putative eg1, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf11588_144701-153990' '(at1g64390 : 907.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 737.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 566.0) no description available & (reliability: 1814.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF00759;PF09478)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf11743_67294-74707' '(at1g19940 : 678.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (q69sg5|gun24_orysa : 670.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (gnl|cdd|85009 : 464.0) no description available & (reliability: 1300.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf12797_21354-27747' '(at2g44550 : 548.0) glycosyl hydrolase 9B10 (GH9B10); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1833 Blast hits to 1821 proteins in 270 species: Archae - 2; Bacteria - 670; Metazoa - 180; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 535.0) no description available & (q6l4i2|gun15_orysa : 513.0) Endoglucanase 15 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 15) - Oryza sativa (Rice) & (reliability: 1096.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf13118_178920-183449' '(at4g02290 : 467.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 438.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 333.0) no description available & (reliability: 934.0) & (original description: Putative Cel4, Description = Endo-beta-1,4-glucanase, PFAM = PF00759)' T
'26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf21401_25901-33518' '(at4g39010 : 710.0) glycosyl hydrolase 9B18 (GH9B18); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B17 (TAIR:AT4G39000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69nf5|gun23_orysa : 642.0) Endoglucanase 23 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 23) (OsGLU12) - Oryza sativa (Rice) & (gnl|cdd|85009 : 522.0) no description available & (reliability: 1420.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T
'26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf02261_43824-48933' '(at1g13130 : 417.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative BnaA06g07600D, Description = BnaA06g07600D protein, PFAM = PF00150;PF00652)' T
'26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf07965_190762-195953' '(at1g13130 : 621.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|84563 : 80.4) no description available & (reliability: 1242.0) & (original description: Putative At1g13130, Description = At1g13130, PFAM = PF00150)' T
'26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf10840_14169-19595' '(at1g13130 : 441.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative At1g13130, Description = At1g13130, PFAM = PF00150)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold15049_2095-5651' '(at3g58100 : 136.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 272.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold20287_14635-20771' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 107.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold20287_14925-21123' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold39719_14028-19018' '(at2g30933 : 154.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 118.0) no description available & (p52409|e13b_wheat : 88.2) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 308.0) & (original description: Putative Sb09g029700, Description = Putative uncharacterized protein Sb09g029700, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold43544_14103-17806' '(at5g64790 : 299.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 168.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 152.0) no description available & (reliability: 598.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold46605_9016-14661' '(at4g33840 : 537.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1046.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold63879_1-2653' '(at5g35740 : 122.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 98.4) no description available & (reliability: 244.0) & (original description: Putative BnaC04g29770D, Description = BnaC04g29770D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold79028_2800-7212' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 105.0) no description available & (reliability: 220.0) & (original description: Putative BnaCnng26200D, Description = BnaCnng26200D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold81477_1-3453' '(at2g30933 : 151.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative PGSC0003DMG400017347, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold95926_624-4331' '(at1g79480 : 122.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 121.0) no description available & (reliability: 244.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold564_527411-531001' '(at1g30080 : 488.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 936.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold1137_348182-351666' '(at3g58100 : 122.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 100.0) no description available & (reliability: 244.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2393_145991-152083' '(at3g58100 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 109.0) no description available & (reliability: 276.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2445_202268-213261' '(at4g33840 : 502.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 992.0) & (original description: Putative PGSC0003DMG400014606, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2886_207731-212283' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 106.0) no description available & (reliability: 220.0) & (original description: Putative At1g26450, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold3069_214317-259744' '(at2g30933 : 154.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (p52409|e13b_wheat : 88.6) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 308.0) & (original description: Putative BnaA04g17980D, Description = BnaA04g17980D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold5939_97662-107006' '(at4g33840 : 559.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1074.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold6733_64538-68711' '(at2g19440 : 173.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 86.1) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00000050ctg019_1206-12133' '(at1g79480 : 129.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (reliability: 258.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00000286ctg009_1391-8886' '(at4g33840 : 497.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 990.0) & (original description: Putative BnaA03g50660D, Description = BnaA03g50660D protein, PFAM = PF00331;PF02018)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00012955ctg003_1-2914' '(at4g29360 : 338.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G56590.1); Has 2823 Blast hits to 2771 proteins in 139 species: Archae - 1; Bacteria - 6; Metazoa - 3; Fungi - 12; Plants - 2788; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 285.0) no description available & (reliability: 676.0) & (original description: Putative At5g24318, Description = O-Glycosyl hydrolases family 17 protein, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00013340ctg024_1941-5617' '(at3g58100 : 137.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 274.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00026509ctg003_8262-11032' '(at1g18650 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 101.0) no description available & (p52409|e13b_wheat : 91.7) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative E13L3, Description = CBM43-containing protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 582.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00027077ctg008_1386-4971' '(at1g30080 : 493.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 944.0) & (original description: Putative BnaA08g17590D, Description = BnaA08g17590D protein, PFAM = PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00027738ctg002_8436-12483' '(at1g18650 : 111.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 222.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00029932ctg003_3034-6131' '(at1g78520 : 129.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 96.5) no description available & (p52409|e13b_wheat : 85.9) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 258.0) & (original description: Putative BnaA07g39130D, Description = BnaA07g39130D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1200.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00032036ctg004_2356-8246' '(at3g58100 : 119.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 103.0) no description available & (reliability: 238.0) & (original description: Putative BnaC04g52820D, Description = BnaC04g52820D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00035404ctg000_2978-7946' '(at4g33840 : 575.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1104.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00054623ctg001_769-6510' '(at5g58480 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G17180.1); Has 2632 Blast hits to 2560 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 17; Plants - 2601; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 225.0) no description available & (p52408|e13b_prupe : 202.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1204.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00113_408874-419694' '(at4g33830 : 454.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47910 : 178.0) no description available & (reliability: 870.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00160_858610-861707' '(at1g78520 : 132.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 98.0) no description available & (p52409|e13b_wheat : 86.7) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 264.0) & (original description: Putative BnaA07g39130D, Description = BnaA07g39130D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00402_119587-123723' '(gnl|cdd|87420 : 127.0) no description available & (at1g09460 : 123.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 28400 Blast hits to 14800 proteins in 1032 species: Archae - 269; Bacteria - 5437; Metazoa - 8038; Fungi - 2740; Plants - 5953; Viruses - 1223; Other Eukaryotes - 4740 (source: NCBI BLink). & (p52409|e13b_wheat : 95.9) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 246.0) & (original description: Putative Glu2, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00635_900956-905550' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 106.0) no description available & (reliability: 220.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01006_410054-414554' '(at5g64790 : 532.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84700 : 249.0) no description available & (p52409|e13b_wheat : 203.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1064.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01250_23210-27674' '(at2g30933 : 151.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 115.0) no description available & (p52409|e13b_wheat : 85.5) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative Sb09g029700, Description = Putative uncharacterized protein Sb09g029700, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01521_260805-265039' '(at1g18650 : 123.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 112.0) no description available & (p52409|e13b_wheat : 90.1) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 246.0) & (original description: Putative BnaC08g40090D, Description = BnaC08g40090D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01779_132331-136447' '(at4g31140 : 637.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 235.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1274.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01785_1007222-1010337' '(gnl|cdd|87420 : 95.7) no description available & (at3g55430 : 88.2) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf02232_537317-540906' '(at1g30080 : 494.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 952.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf02317_103860-107830' '(at5g55180 : 577.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G26830.1); Has 563 Blast hits to 555 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1154.0) & (original description: Putative B29, Description = Beta-1,3-glucanase-like protein, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf03045_129200-140613' '(gnl|cdd|84700 : 299.0) no description available & (at4g26830 : 250.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q03773|e13a_soybn : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 500.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf03541_87903-92433' '(at5g35740 : 138.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 276.0) & (original description: Putative At5g35740, Description = At5g35740, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04400_327144-331019' '(at1g18650 : 114.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 109.0) no description available & (reliability: 228.0) & (original description: Putative BnaAnng06790D, Description = BnaAnng06790D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04500_32815-36631' '(at5g64790 : 297.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 162.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 154.0) no description available & (reliability: 594.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04500_489400-493520' '(at3g24330 : 327.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 188.0) no description available & (p52409|e13b_wheat : 169.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 638.0) & (original description: Putative bgl, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04554_636392-642034' '(at5g58090 : 631.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 237.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1260.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04741_528059-530602' '(at1g78520 : 114.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 89.5) no description available & (reliability: 228.0) & (original description: Putative At1g78520, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05029_46939-51910' '(at4g05430 : 151.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 1391 Blast hits to 1343 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|87420 : 133.0) no description available & (p52409|e13b_wheat : 107.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative At4g05430, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05295_266054-373999' '(at1g79480 : 134.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 126.0) no description available & (reliability: 268.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05621_34280-77701' '(at1g67490 : 1072.0) Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).; glucosidase 1 (GCS1); FUNCTIONS IN: alpha-glucosidase activity; INVOLVED IN: root epidermal cell differentiation, epidermal cell differentiation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Six-hairpin glycosidases superfamily protein (TAIR:AT1G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86272 : 845.0) no description available & (gnl|cdd|37372 : 763.0) no description available & (reliability: 2014.0) & (original description: Putative GCS1, Description = Mannosyl-oligosaccharide glucosidase GCS1, PFAM = PF03200;PF16923)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06301_102503-109415' '(gnl|cdd|87420 : 135.0) no description available & (at2g30933 : 114.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 89.4) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 228.0) & (original description: Putative Glu2, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06826_594757-600011' '(at3g24330 : 288.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 193.0) no description available & (p23433|e13d_tobac : 147.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 536.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06933_232245-235297' '(at5g67460 : 130.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G13560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (reliability: 252.0) & (original description: Putative PDCB3, Description = Hydrolase, hydrolyzing O-glycosyl compounds, putative, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1190.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07608_235805-241969' '(at4g33840 : 529.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 185.0) no description available & (reliability: 1032.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07883_419348-422832' '(at3g58100 : 133.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 266.0) & (original description: Putative PDCB5, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 5, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf08753_297035-302171' '(at4g05430 : 150.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 1391 Blast hits to 1343 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|87420 : 129.0) no description available & (p52409|e13b_wheat : 110.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 300.0) & (original description: Putative GLC1, Description = X8-like protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09191_250443-256576' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 107.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09191_250742-263321' '(at3g58100 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 276.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09505_171063-176787' '(at4g33840 : 547.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1068.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09505_171279-174402' '(at4g33840 : 229.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 147.0) no description available & (reliability: 424.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09654_141856-146995' '(at4g33840 : 518.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 191.0) no description available & (reliability: 1026.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331;PF02018)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09684_13390-22624' '(at2g30933 : 150.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (p52409|e13b_wheat : 86.3) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 300.0) & (original description: Putative BnaA04g17980D, Description = BnaA04g17980D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf10852_250988-254857' '(at2g30933 : 149.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 298.0) & (original description: Putative PGSC0003DMG400017347, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf11757_334398-338074' '(at3g58100 : 139.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 278.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf15326_59668-62588' '(at5g35740 : 145.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (reliability: 290.0) & (original description: Putative BnaC04g29770D, Description = BnaC04g29770D protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf15972_148648-167749' '(at1g18650 : 134.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 104.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 268.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf18513_4728-7684' '(at5g67460 : 131.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G13560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 129.0) no description available & (reliability: 238.0) & (original description: Putative pr2, Description = CBM43-containing protein, PFAM = PF07983)' T
'26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf18669_17238-20995' '(at5g64790 : 279.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 154.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 136.0) no description available & (reliability: 558.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold1787_24638-29256' '(at2g05790 : 694.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2832 Blast hits to 2751 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 13; Plants - 2801; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84700 : 312.0) no description available & (p52409|e13b_wheat : 285.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1388.0) & (original description: Putative At2g01630, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold8256_42047-48123' '(at1g66250 : 659.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 2879 Blast hits to 2803 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 66; Plants - 2798; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|84700 : 266.0) no description available & (p52409|e13b_wheat : 232.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1318.0) & (original description: Putative At1g66250, Description = Glucan endo-1,3-beta-glucosidase 2, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold9822_41869-47786' '(at3g15800 : 473.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (q02439|e13f_horvu : 209.0) Putative glucan endo-1,3-beta-glucosidase GVI precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) - Hordeum vulgare (Barley) & (reliability: 946.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold18020_3094-8467' '(at3g55430 : 466.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 395.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 248.0) no description available & (reliability: 932.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold42831_1212-6980' '(at2g01630 : 640.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 273.0) no description available & (p52409|e13b_wheat : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1280.0) & (original description: Putative glysoja_023433, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold43544_14103-17806' '(at5g64790 : 299.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 168.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 152.0) no description available & (reliability: 586.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold62240_1-7617' '(at2g26600 : 514.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G15800.1); Has 2078 Blast hits to 2068 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2065; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52399|e13l_tobac : 218.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 1028.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold68355_1-3094' '(at3g24330 : 593.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 244.0) no description available & (p36401|e13h_tobac : 210.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1186.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold235_114036-120777' '(at3g55430 : 449.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 380.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 235.0) no description available & (reliability: 898.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold564_527411-531001' '(at1g30080 : 488.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 976.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold994_12237-63612' '(at3g13560 : 509.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 263.0) no description available & (p52409|e13b_wheat : 216.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|35638 : 202.0) no description available & (reliability: 1018.0) & (original description: Putative At3g13560, Description = Glucan endo-1,3-beta-glucosidase 4, PFAM = PF07983;PF00332;PF00179)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold1653_1-18990' '(p23547|e13g_tobac : 410.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 374.0) no description available & (at4g16260 : 317.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold1765_272176-279678' '(p23547|e13g_tobac : 409.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 401.0) no description available & (at4g16260 : 315.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold4077_135383-197843' '(at1g32860 : 436.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 273.0) no description available & (p52409|e13b_wheat : 231.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 872.0) & (original description: Putative BGlu, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold4925_164288-168784' '(at3g55430 : 449.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 387.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 257.0) no description available & (reliability: 898.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold6733_64538-68711' '(at2g19440 : 173.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 86.1) no description available & (reliability: 346.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00002178ctg006_2258-6967' '(at3g13560 : 523.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 259.0) no description available & (p52409|e13b_wheat : 223.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1046.0) & (original description: Putative At3g13560, Description = Glucan endo-1,3-beta-glucosidase 4, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00010094ctg003_3358-9660' '(at5g56590 : 660.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G29360.1); Has 2891 Blast hits to 2808 proteins in 162 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 51; Plants - 2805; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 292.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1320.0) & (original description: Putative At5g56590, Description = Glucan endo-1,3-beta-glucosidase 13, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00012955ctg003_1-2914' '(at4g29360 : 338.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G56590.1); Has 2823 Blast hits to 2771 proteins in 139 species: Archae - 1; Bacteria - 6; Metazoa - 3; Fungi - 12; Plants - 2788; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 285.0) no description available & (reliability: 664.0) & (original description: Putative At5g24318, Description = O-Glycosyl hydrolases family 17 protein, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00015467ctg006_137-3779' '(at2g26600 : 516.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G15800.1); Has 2078 Blast hits to 2068 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2065; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 291.0) no description available & (p52399|e13l_tobac : 219.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 1032.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 560.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00027077ctg008_1386-4971' '(at1g30080 : 493.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 986.0) & (original description: Putative BnaA08g17590D, Description = BnaA08g17590D protein, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1146.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00030945ctg000_1-2676' '(at3g15800 : 472.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 287.0) no description available & (q02438|e13e_horvu : 211.0) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) - Hordeum vulgare (Barley) & (reliability: 944.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01001_26347-29987' '(p23433|e13d_tobac : 638.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 423.0) no description available & (at4g16260 : 333.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative SP41A, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01001_44647-73679' '(p23547|e13g_tobac : 596.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 420.0) no description available & (at4g16260 : 333.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01006_410054-414554' '(at5g64790 : 532.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84700 : 249.0) no description available & (p52409|e13b_wheat : 203.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1044.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01033_97388-111409' '(at2g01630 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 272.0) no description available & (p52409|e13b_wheat : 237.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative KK1_016035, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01413_155244-162006' '(at3g55430 : 468.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 399.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 247.0) no description available & (reliability: 936.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01779_132331-136447' '(at4g31140 : 637.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 235.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1272.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01785_1007222-1010337' '(gnl|cdd|87420 : 95.7) no description available & (at3g55430 : 88.2) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01927_514936-519266' '(at5g56590 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G29360.1); Has 2891 Blast hits to 2808 proteins in 162 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 51; Plants - 2805; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|84700 : 311.0) no description available & (p52409|e13b_wheat : 293.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative At5g56590, Description = Glucan endo-1,3-beta-glucosidase 13, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01934_243182-247234' '(p27666|e13f_tobac : 704.0) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLB) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 445.0) no description available & (at4g16260 : 368.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02014_50457-55801' '(at3g55430 : 444.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 377.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 235.0) no description available & (reliability: 888.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02015_242727-246621' '(at1g64760 : 464.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 217.0) no description available & (p23432|e13c_tobac : 182.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02232_537317-540906' '(at1g30080 : 494.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 988.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02317_103860-107830' '(at5g55180 : 577.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G26830.1); Has 563 Blast hits to 555 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1096.0) & (original description: Putative B29, Description = Beta-1,3-glucanase-like protein, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02510_543822-550077' '(at2g27500 : 471.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 294.0) no description available & (p52409|e13b_wheat : 254.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 942.0) & (original description: Putative Sb04g021700, Description = Putative uncharacterized protein Sb04g021700, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02886_130769-134284' '(at5g24318 : 426.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 365.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 261.0) no description available & (reliability: 852.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03045_129200-140613' '(gnl|cdd|84700 : 299.0) no description available & (at4g26830 : 250.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q03773|e13a_soybn : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 496.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03455_173695-176293' '(gnl|cdd|87420 : 88.8) no description available & (at3g55430 : 82.4) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03500_273080-276314' '(at3g55780 : 323.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 17 protein (TAIR:AT3G61810.1); Has 2109 Blast hits to 2094 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 2095; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 207.0) no description available & (p23433|e13d_tobac : 156.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 646.0) & (original description: Putative BnaA09g35360D, Description = BnaA09g35360D protein, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03546_191683-236967' '(at3g24330 : 645.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 247.0) no description available & (p52408|e13b_prupe : 208.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1290.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03546_231139-236907' '(at3g24330 : 645.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 244.0) no description available & (p52408|e13b_prupe : 208.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1290.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03770_56977-66147' '(at5g58090 : 687.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 231.0) no description available & (p52409|e13b_wheat : 202.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1374.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04083_443464-446490' '(at5g24318 : 480.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 342.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 267.0) no description available & (reliability: 960.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04083_443705-446961' '(at5g24318 : 458.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 331.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 270.0) no description available & (reliability: 916.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04195_177664-181165' '(at1g32860 : 442.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 280.0) no description available & (p52409|e13b_wheat : 237.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 884.0) & (original description: Putative At4g18340, Description = Beta-1,3-glucanase-like protein, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04270_107868-111140' '(gnl|cdd|84700 : 354.0) no description available & (q02439|e13f_horvu : 323.0) Putative glucan endo-1,3-beta-glucosidase GVI precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) - Hordeum vulgare (Barley) & (at3g57260 : 292.0) beta 1,3-glucanase; "beta-1,3-glucanase 2" (BGL2); FUNCTIONS IN: glucan 1,3-beta-glucosidase activity, protein binding, cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: systemic acquired resistance, response to cold; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 3 (TAIR:AT3G57240.1); Has 2232 Blast hits to 2218 proteins in 176 species: Archae - 0; Bacteria - 18; Metazoa - 3; Fungi - 79; Plants - 2105; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04500_32815-36631' '(at5g64790 : 297.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 162.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 154.0) no description available & (reliability: 552.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04500_489400-493520' '(at3g24330 : 327.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 188.0) no description available & (p52409|e13b_wheat : 169.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 654.0) & (original description: Putative bgl, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04554_636392-642034' '(at5g58090 : 631.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 237.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1262.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04610_152749-159059' '(at2g16230 : 474.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G34480.1); Has 576 Blast hits to 566 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 566; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|84700 : 272.0) no description available & (p52409|e13b_wheat : 270.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 948.0) & (original description: Putative BnaA06g37080D, Description = BnaA06g37080D protein, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04778_308460-315705' '(at4g34480 : 486.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G16230.1); Has 576 Blast hits to 566 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 570; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 265.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 958.0) & (original description: Putative OLE9, Description = Glucan endo-1,3-beta-D-glucosidase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04869_286254-289890' '(p52398|e13k_tobac : 599.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 418.0) no description available & (at4g16260 : 323.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative GGL4, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GL153, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05206_1-4503' '(at3g55430 : 455.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 387.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 257.0) no description available & (reliability: 910.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05767_379140-383329' '(at3g15800 : 480.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 292.0) no description available & (p52409|e13b_wheat : 226.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 960.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05918_257-4996' '(at3g23770 : 555.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G14080.1); Has 2823 Blast hits to 2749 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 32; Plants - 2780; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 327.0) no description available & (p52409|e13b_wheat : 245.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1110.0) & (original description: Putative A6, Description = Probable glucan endo-1,3-beta-glucosidase A6, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf06461_162199-168786' '(at5g58090 : 688.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 229.0) no description available & (p52409|e13b_wheat : 200.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1376.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf06826_594757-600011' '(at3g24330 : 288.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 193.0) no description available & (p23433|e13d_tobac : 147.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 576.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07048_112248-117045' '(at2g19440 : 650.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|84700 : 222.0) no description available & (p52409|e13b_wheat : 194.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1300.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07196_163983-167645' '(p23547|e13g_tobac : 405.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 375.0) no description available & (at4g16260 : 311.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07284_282563-288566' '(at2g27500 : 472.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 294.0) no description available & (p52409|e13b_wheat : 254.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 944.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1140.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07805_91782-96914' '(at1g64760 : 679.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 227.0) no description available & (p52409|e13b_wheat : 196.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1358.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07939_150866-155266' '(at5g58090 : 701.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 225.0) no description available & (p52409|e13b_wheat : 201.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1402.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08111_191950-199075' '(at2g01630 : 660.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 275.0) no description available & (p52409|e13b_wheat : 241.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1320.0) & (original description: Putative At2g01630, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08465_430530-436200' '(at1g66250 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 2879 Blast hits to 2803 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 66; Plants - 2798; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|84700 : 265.0) no description available & (p52409|e13b_wheat : 233.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative B13G_1, Description = Beta-1,3-glucanase 1, PFAM = PF07983;PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08504_290174-293738' '(gnl|cdd|84700 : 366.0) no description available & (p23547|e13g_tobac : 363.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (at4g16260 : 266.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative GGL4, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GL153, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08819_42090-46184' '(at1g32860 : 468.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 248.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 936.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08941_1-3253' '(p23547|e13g_tobac : 404.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 393.0) no description available & (at4g16260 : 322.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf09846_238004-241759' '(at3g07320 : 608.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G23770.1); Has 2806 Blast hits to 2728 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2791; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 301.0) no description available & (p52409|e13b_wheat : 264.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1216.0) & (original description: Putative A6, Description = Probable glucan endo-1,3-beta-glucosidase A6, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf13833_263078-266780' '(at5g24318 : 457.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 405.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 260.0) no description available & (reliability: 914.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF00332;PF07983)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf14799_111258-116575' '(p07979|gub_nicpl : 629.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84700 : 470.0) no description available & (at4g16260 : 398.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative GN1, Description = Lichenase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf16079_3158-10660' '(p23547|e13g_tobac : 408.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 402.0) no description available & (at4g16260 : 313.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T
'26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf18669_17238-20995' '(at5g64790 : 279.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 154.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 136.0) no description available & (reliability: 540.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T
'26.5' 'misc.acyl transferases' 'nbv0.3scaffold9260_41659-51196' '(at1g80410 : 442.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 328.0) no description available & (reliability: 884.0) & (original description: Putative naa15, Description = N-alpha-acetyltransferase 15, NatA auxiliary subunit, PFAM = PF13414;PF12569)' T
'26.5' 'misc.acyl transferases' 'nbv0.3scaffold16475_13-10795' '(at1g80410 : 619.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 382.0) no description available & (reliability: 1238.0) & (original description: Putative NAA16, Description = N-alpha-acetyltransferase, NatA auxiliary subunit, PFAM = PF12569)' T
'26.5' 'misc.acyl transferases' 'nbv0.3scaffold32627_13000-21744' '(at3g02030 : 423.0) transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 792.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146;PF03982)' T
'26.5' 'misc.acyl transferases' 'nbv0.3scaffold101984_318-3797' '(at1g80410 : 160.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 94.6) no description available & (reliability: 320.0) & (original description: Putative pco068905, Description = N-terminal acetyltransferase A, auxiliary subunit, PFAM = PF12569)' T
'26.5' 'misc.acyl transferases' 'nbv0.5scaffold620_43221-74156' '(at1g80410 : 1212.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 794.0) no description available & (reliability: 2424.0) & (original description: Putative Naa16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF12569;PF13414)' T
'26.5' 'misc.acyl transferases' 'nbv0.5scaffold4844_14294-26446' '(at4g01130 : 504.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 295.0) no description available & (q7y1x1|est_hevbr : 282.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1008.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.5' 'misc.acyl transferases' 'niben044scf00004043ctg010_1773-9371' '(at2g34410 : 806.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 487.0) no description available & (gnl|cdd|71219 : 290.0) no description available & (reliability: 1612.0) & (original description: Putative CASD1, Description = CAS1 domain-containing protein 1, PFAM = PF07779)' T
'26.5' 'misc.acyl transferases' 'niben101scf00109_212200-227863' '(at5g41130 : 700.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1). & (reliability: 1308.0) & (original description: Putative At3g26840, Description = Acyltransferase-like protein At3g26840, chloroplastic, PFAM = PF12146;PF03982)' T
'26.5' 'misc.acyl transferases' 'niben101scf00447_313015-325579' '(at4g01130 : 506.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 295.0) no description available & (q7y1x1|est_hevbr : 280.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1012.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.5' 'misc.acyl transferases' 'niben101scf00607_268095-283366' '(at1g29890 : 794.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36912 : 476.0) no description available & (gnl|cdd|71219 : 278.0) no description available & (reliability: 1568.0) & (original description: Putative RWA1, Description = Protein REDUCED WALL ACETYLATION 1, PFAM = PF07779;PF07779)' T
'26.5' 'misc.acyl transferases' 'niben101scf01990_35165-40161' '(at4g01130 : 500.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 292.0) no description available & (q7y1x1|est_hevbr : 274.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1000.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.5' 'misc.acyl transferases' 'niben101scf03280_129256-144027' '(at1g78690 : 374.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.2); Has 1059 Blast hits to 1041 proteins in 400 species: Archae - 0; Bacteria - 447; Metazoa - 249; Fungi - 138; Plants - 116; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|38058 : 280.0) no description available & (gnl|cdd|47863 : 80.8) no description available & (reliability: 748.0) & (original description: Putative taz, Description = Tafazzin, PFAM = PF01553)' T
'26.5' 'misc.acyl transferases' 'niben101scf04881_154049-162204' '(at2g34410 : 808.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 486.0) no description available & (gnl|cdd|71219 : 289.0) no description available & (reliability: 1616.0) & (original description: Putative RWA3, Description = Protein REDUCED WALL ACETYLATION 3, PFAM = PF07779)' T
'26.5' 'misc.acyl transferases' 'niben101scf05828_46088-74038' '(at1g80410 : 1214.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 799.0) no description available & (reliability: 2428.0) & (original description: Putative NAA16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF12569;PF13414)' T
'26.5' 'misc.acyl transferases' 'niben101scf06077_422202-429881' '(at3g51520 : 414.0) diacylglycerol acyltransferase family; FUNCTIONS IN: diacylglycerol O-acyltransferase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); Has 1280 Blast hits to 1264 proteins in 273 species: Archae - 0; Bacteria - 248; Metazoa - 568; Fungi - 161; Plants - 127; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36049 : 255.0) no description available & (gnl|cdd|86505 : 254.0) no description available & (reliability: 828.0) & (original description: Putative DGAT2, Description = Diacylglycerol O-acyltransferase 2, PFAM = PF03982)' T
'26.5' 'misc.acyl transferases' 'niben101scf07184_556580-566939' '(at3g06550 : 770.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36912 : 488.0) no description available & (gnl|cdd|71219 : 294.0) no description available & (reliability: 1486.0) & (original description: Putative RWA2, Description = Protein REDUCED WALL ACETYLATION 2, PFAM = PF07779)' T
'26.5' 'misc.acyl transferases' 'niben101scf08121_35785-59628' '(at1g80410 : 1218.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 787.0) no description available & (reliability: 2436.0) & (original description: Putative Naa16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF13414;PF12569)' T
'26.5' 'misc.acyl transferases' 'niben101scf18348_144886-152568' '(at1g80950 : 505.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: calcineurin B subunit-related (TAIR:AT2G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39865 : 350.0) no description available & (gnl|cdd|47863 : 82.3) no description available & (reliability: 1010.0) & (original description: Putative LPEAT1, Description = Lysophospholipid acyltransferase LPEAT1, PFAM = PF01553)' T
'26.5' 'misc.acyl transferases' 'niben101scf35412_80420-85772' '(at1g65450 : 542.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1). & (gnl|cdd|66174 : 341.0) no description available & (o23917|hcbt2_diaca : 163.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1084.0) & (original description: Putative hct-D, Description = Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase, PFAM = PF02458)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold14244_829-6035' '(at4g31790 : 460.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38333 : 431.0) no description available & (gnl|cdd|31983 : 294.0) no description available & (reliability: 920.0) & (original description: Putative dph5, Description = Diphthine synthase, PFAM = PF00590)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold45937_4673-10552' '(at4g29510 : 553.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 464.0) no description available & (reliability: 1106.0) & (original description: Putative PRMT1, Description = Probable protein arginine N-methyltransferase 1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold45937_5062-8600' '(at4g29510 : 306.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 225.0) no description available & (reliability: 612.0) & (original description: Putative PRMT1, Description = Chromosome undetermined SCAF7678, whole genome shotgun sequence, PFAM = )' T
'26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold634_445717-457021' '(at4g29510 : 569.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 472.0) no description available & (reliability: 1138.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold2269_221068-234099' '(at3g06930 : 644.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 575.0) no description available & (reliability: 1288.0) & (original description: Putative CARM1, Description = Probable histone-arginine methyltransferase CARM1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold5748_8622-18585' '(at3g20020 : 400.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 223.0) no description available & (reliability: 800.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = )' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00003304ctg031_4311-8972' '(at4g29510 : 469.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 377.0) no description available & (reliability: 938.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00004043ctg010_1773-9371' '(at2g34410 : 806.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 487.0) no description available & (gnl|cdd|71219 : 290.0) no description available & (reliability: 1512.0) & (original description: Putative CASD1, Description = CAS1 domain-containing protein 1, PFAM = PF07779)' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00028585ctg005_5784-9772' '(at5g42760 : 424.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 117.0) no description available & (reliability: 848.0) & (original description: Putative Sb01g006610, Description = Putative uncharacterized protein Sb01g006610, PFAM = PF04072)' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00029902ctg002_1943-12444' '(at3g20020 : 405.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 254.0) no description available & (reliability: 810.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00041723ctg001_9153-15782' '(at4g29510 : 457.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 394.0) no description available & (reliability: 914.0) & (original description: Putative prmt1, Description = Protein arginine methyltransferase, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00061114ctg000_2585-5211' '(at3g12270 : 120.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PRMT3, Description = Putative arginine N-methyltransferase 3-like protein, PFAM = )' T
'26.6' 'misc.O-methyl transferases' 'niben044scf00061779ctg000_59-3959' '(gnl|cdd|86349 : 282.0) no description available & (at1g15125 : 263.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G68040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fyz9|bamt_antma : 163.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 526.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf00055_377656-386123' '(at5g42760 : 434.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 110.0) no description available & (reliability: 868.0) & (original description: Putative BnaA06g37060D, Description = BnaA06g37060D protein, PFAM = PF04072)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf00152_2533765-2540909' '(at4g31790 : 466.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38333 : 438.0) no description available & (gnl|cdd|31983 : 303.0) no description available & (reliability: 932.0) & (original description: Putative dph5, Description = Diphthine synthase, PFAM = PF00590)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf00502_34999-47564' '(at3g20020 : 394.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 220.0) no description available & (reliability: 788.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = )' T
'26.6' 'misc.O-methyl transferases' 'niben101scf00607_268095-283366' '(at1g29890 : 794.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36912 : 476.0) no description available & (gnl|cdd|71219 : 278.0) no description available & (reliability: 1588.0) & (original description: Putative RWA1, Description = Protein REDUCED WALL ACETYLATION 1, PFAM = PF07779;PF07779)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf00927_274221-277870' '(gnl|cdd|86349 : 291.0) no description available & (at1g68040 : 231.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 110.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 450.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf02114_58079-61712' '(gnl|cdd|86349 : 328.0) no description available & (at1g68040 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 161.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 568.0) & (original description: Putative At5g38100, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38100, PFAM = PF03492)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf02736_149256-158938' '(at4g16570 : 806.0) protein arginine methyltransferase 7 (PRMT7); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein arginine N-methyltransferase (InterPro:IPR014644); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36714 : 369.0) no description available & (reliability: 1612.0) & (original description: Putative PRMT16, Description = Protein arginine N-methyltransferase 1.6, PFAM = )' T
'26.6' 'misc.O-methyl transferases' 'niben101scf02816_710769-716588' '(at4g29510 : 570.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 479.0) no description available & (reliability: 1140.0) & (original description: Putative PRMT1, Description = Probable protein arginine N-methyltransferase 1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf02828_30893-35119' '(gnl|cdd|86349 : 317.0) no description available & (at1g15125 : 298.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G68040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 596.0) & (original description: Putative At5g38780, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38780, PFAM = PF03492)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf03129_293094-304502' '(at3g06930 : 687.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 610.0) no description available & (reliability: 1374.0) & (original description: Putative PRMT13, Description = Probable histone-arginine methyltransferase 1.3, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf04103_702228-719997' '(at1g04870 : 543.0) Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 10 (PRMT10); FUNCTIONS IN: histone-arginine N-methyltransferase activity, methyltransferase activity, protein-arginine omega-N asymmetric methyltransferase activity, [myelin basic protein]-arginine N-methyltransferase activity, protein-arginine omega-N monomethyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, peptidyl-arginine methylation, to asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast hits to 3335 proteins in 890 species: Archae - 50; Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants - 354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|36712 : 338.0) no description available & (reliability: 1086.0) & (original description: Putative PRMT10, Description = Protein arginine N-methyltransferase PRMT10, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf04610_604431-608190' '(at5g42760 : 427.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 120.0) no description available & (reliability: 854.0) & (original description: Putative BnaA06g37060D, Description = BnaA06g37060D protein, PFAM = PF04072)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf04719_82534-101315' '(at3g20020 : 568.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 377.0) no description available & (reliability: 1136.0) & (original description: Putative PRMT6, Description = Probable protein arginine N-methyltransferase 6, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf04881_154049-162204' '(at2g34410 : 808.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 486.0) no description available & (gnl|cdd|71219 : 289.0) no description available & (reliability: 1516.0) & (original description: Putative RWA3, Description = Protein REDUCED WALL ACETYLATION 3, PFAM = PF07779)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf05231_155528-169969' '(at3g06930 : 677.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 617.0) no description available & (reliability: 1354.0) & (original description: Putative CARM1, Description = Probable histone-arginine methyltransferase CARM1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf05449_242432-250525' '(at4g29510 : 530.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 434.0) no description available & (reliability: 1060.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf05487_241690-247543' '(at1g69523 : 291.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G69526.2); Has 8414 Blast hits to 8405 proteins in 1811 species: Archae - 286; Bacteria - 5877; Metazoa - 213; Fungi - 292; Plants - 233; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (gnl|cdd|39501 : 198.0) no description available & (gnl|cdd|87468 : 88.1) no description available & (reliability: 582.0) & (original description: Putative At1g69523, Description = At1g69520/F10D13_17, PFAM = PF08241)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf06061_111343-129229' '(at3g53140 : 517.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, protein dimerization activity, O-methyltransferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 3047 Blast hits to 3042 proteins in 532 species: Archae - 0; Bacteria - 810; Metazoa - 98; Fungi - 512; Plants - 1526; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38388 : 299.0) no description available & (q8w013|comt1_catro : 249.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|85101 : 217.0) no description available & (reliability: 1034.0) & (original description: Putative omt, Description = O-diphenol-O-methyl transferase, PFAM = PF00891)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf07184_556580-566939' '(at3g06550 : 770.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36912 : 488.0) no description available & (gnl|cdd|71219 : 294.0) no description available & (reliability: 1418.0) & (original description: Putative RWA2, Description = Protein REDUCED WALL ACETYLATION 2, PFAM = PF07779)' T
'26.6' 'misc.O-methyl transferases' 'niben101scf10431_80076-88389' '(at3g12270 : 555.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (gnl|cdd|36712 : 313.0) no description available & (reliability: 1110.0) & (original description: Putative PRMT3, Description = Probable protein arginine N-methyltransferase 3, PFAM = PF12756;PF13649)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold4045_13222-17672' '(at1g62830 : 965.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.; LSD1-like 1 (LDL1); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 6747 Blast hits to 5826 proteins in 999 species: Archae - 53; Bacteria - 2706; Metazoa - 1658; Fungi - 565; Plants - 779; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35252 : 459.0) no description available & (gnl|cdd|85554 : 249.0) no description available & (o64411|pao_maize : 118.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1930.0) & (original description: Putative LDL1, Description = Lysine-specific histone demethylase 1 homolog 1, PFAM = PF01593;PF04433)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5076_4742-8617' '(q8h0m1|qorh_spiol : 384.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (at4g13010 : 374.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (gnl|cdd|36412 : 200.0) no description available & (gnl|cdd|30949 : 174.0) no description available & (reliability: 748.0) & (original description: Putative At4g13010, Description = Putative quinone-oxidoreductase homolog, chloroplastic, PFAM = PF13602;PF08240)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5199_59636-64294' '(at3g13682 : 970.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.; LSD1-like2 (LDL2); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 5703 Blast hits to 5142 proteins in 914 species: Archae - 48; Bacteria - 2121; Metazoa - 1514; Fungi - 564; Plants - 617; Viruses - 0; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|35252 : 465.0) no description available & (gnl|cdd|85554 : 244.0) no description available & (o64411|pao_maize : 105.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1940.0) & (original description: Putative LDL2, Description = Lysine-specific histone demethylase 1 homolog 2, PFAM = PF04433;PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5512_44199-50120' '(at4g38540 : 357.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (gnl|cdd|37825 : 273.0) no description available & (gnl|cdd|30999 : 134.0) no description available & (reliability: 714.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold6606_39668-46306' '(gnl|cdd|35365 : 241.0) no description available & (at4g10490 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (gnl|cdd|33294 : 163.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 324.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF14226;PF03171)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold7078_52430-57477' '(at1g76160 : 792.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (q00624|aso_brana : 556.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1544.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold11469_1-15368' '(at2g17970 : 281.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 161.0) no description available & (reliability: 562.0) & (original description: Putative At1g48980, Description = Putative ovule protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold19794_22488-28392' '(at3g10390 : 993.0) Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.; FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). & (gnl|cdd|35252 : 465.0) no description available & (gnl|cdd|85554 : 257.0) no description available & (o64411|pao_maize : 94.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1986.0) & (original description: Putative HDMA1501, Description = SWIRM domain protein, PFAM = PF01593;PF04433)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 606.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold30130_3305-20715' '(at4g12290 : 993.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|36400 : 814.0) no description available & (gnl|cdd|85290 : 585.0) no description available & (q43077|amo_pea : 520.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1986.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF02727;PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold31914_3419-8477' '(at1g23740 : 408.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 215.0) no description available & (gnl|cdd|36412 : 203.0) no description available & (q8h0m1|qorh_spiol : 85.5) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 816.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF08240;PF13602)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold66182_4664-7001' '(at1g19250 : 91.7) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative uaz122, Description = Flavin-containing monooxygenase, PFAM = )' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold76668_3930-7831' '(p29162|ntp3_tobac : 564.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 542.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 436.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1084.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF00394;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold79774_3477-7200' '(at2g42490 : 336.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 143.0) no description available & (gnl|cdd|36400 : 122.0) no description available & (reliability: 672.0) & (original description: Putative CuAO, Description = Amine oxidase, PFAM = PF02728;PF02727)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold83237_1770-6555' '(at2g42490 : 382.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 280.0) no description available & (gnl|cdd|36400 : 245.0) no description available & (q43077|amo_pea : 97.4) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 764.0) & (original description: Putative 1D11, Description = Amine oxidase, PFAM = PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold141794_1-1261' '(at2g42490 : 517.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 352.0) no description available & (gnl|cdd|36400 : 296.0) no description available & (q43077|amo_pea : 129.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1034.0) & (original description: Putative amx2, Description = Amine oxidase, PFAM = PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold176543_1-672' '(at4g16310 : 263.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative AOF2, Description = Polyamine oxidase, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold308_30760-42797' '(at1g48910 : 271.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 132.0) no description available & (gnl|cdd|32255 : 102.0) no description available & (reliability: 542.0) & (original description: Putative yuc, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold449_451429-455272' '(at1g31710 : 497.0) Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1551 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 247; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|36400 : 484.0) no description available & (q43077|amo_pea : 457.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (gnl|cdd|85290 : 324.0) no description available & (reliability: 994.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1009_59342-63186' '(at5g25620 : 440.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 236.0) no description available & (gnl|cdd|32255 : 161.0) no description available & (reliability: 880.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF13738)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1502_84413-95849' '(gnl|cdd|36410 : 186.0) no description available & (gnl|cdd|32313 : 177.0) no description available & (at5g16970 : 152.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative ppdbr, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1919_232393-262577' '(at2g43080 : 436.0) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|36804 : 238.0) no description available & (gnl|cdd|47971 : 152.0) no description available & (reliability: 872.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase 1, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1919_247034-262201' '(at2g43080 : 117.0) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MFL8, Description = Prolyl 4-hydroxylase subunit alpha-1, PFAM = )' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2112_156350-182553' '(at5g06580 : 441.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 243.0) no description available & (gnl|cdd|86181 : 198.0) no description available & (reliability: 882.0) & (original description: Putative dld, Description = 2-hydroxy-acid oxidase, PFAM = PF02913)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2201_122171-142074' '(at4g16310 : 1343.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|35252 : 413.0) no description available & (gnl|cdd|85554 : 279.0) no description available & (o64411|pao_maize : 95.1) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2686.0) & (original description: Putative HDMA1503, Description = Amino_oxidase domain protein, PFAM = PF04433;PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2573_133721-139654' '(at5g05320 : 360.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 279.0) no description available & (gnl|cdd|30999 : 146.0) no description available & (reliability: 720.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01266;PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold5789_81094-89896' '(at2g42490 : 1163.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 720.0) no description available & (gnl|cdd|36400 : 607.0) no description available & (q43077|amo_pea : 216.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2326.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF01179;PF01179;PF02728)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold6548_16934-20798' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.7) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 93.6) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 180.2) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold7931_14672-19797' '(p29162|ntp3_tobac : 724.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 681.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 532.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1362.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold8950_6791-26727' '(at1g19250 : 389.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 180.0) no description available & (gnl|cdd|36613 : 170.0) no description available & (reliability: 778.0) & (original description: Putative FMO1, Description = Probable flavin-containing monooxygenase 1, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold9005_17811-21892' '(at1g04610 : 619.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 305.0) no description available & (gnl|cdd|32255 : 191.0) no description available & (reliability: 1238.0) & (original description: Putative YUC3, Description = Probable indole-3-pyruvate monooxygenase YUCCA3, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00000615ctg015_6406-10264' '(at1g48910 : 404.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 219.0) no description available & (gnl|cdd|32255 : 172.0) no description available & (reliability: 808.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF13738)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 884.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00003294ctg015_1114-4657' '(at5g06580 : 236.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 147.0) no description available & (gnl|cdd|86181 : 133.0) no description available & (reliability: 472.0) & (original description: Putative dld, Description = 2-hydroxy-acid oxidase, PFAM = PF02913)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00004686ctg002_3492-6699' '(at5g45180 : 168.0) Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-dependent monooxygenase 1 (TAIR:AT1G19250.1); Has 7331 Blast hits to 7212 proteins in 844 species: Archae - 6; Bacteria - 3308; Metazoa - 739; Fungi - 1235; Plants - 732; Viruses - 0; Other Eukaryotes - 1311 (source: NCBI BLink). & (gnl|cdd|36613 : 151.0) no description available & (gnl|cdd|32255 : 114.0) no description available & (reliability: 336.0) & (original description: Putative PGSC0003DMG400018659, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 582.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 872.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00009820ctg007_6029-13654' '(at1g24340 : 892.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2421 (EMB2421); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); Has 5711 Blast hits to 5585 proteins in 1112 species: Archae - 4; Bacteria - 3878; Metazoa - 19; Fungi - 944; Plants - 66; Viruses - 0; Other Eukaryotes - 800 (source: NCBI BLink). & (gnl|cdd|75374 : 266.0) no description available & (gnl|cdd|39059 : 214.0) no description available & (reliability: 1784.0) & (original description: Putative EMB2421, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00010150ctg016_8418-14556' '(gnl|cdd|35365 : 275.0) no description available & (at2g36690 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 180.0) no description available & (p51091|ldox_maldo : 154.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 418.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00011556ctg005_10147-14063' '(at1g48910 : 180.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative spi1, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00011556ctg010_4695-7342' '(at1g48910 : 248.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 178.0) no description available & (gnl|cdd|32255 : 164.0) no description available & (reliability: 496.0) & (original description: Putative yuc, Description = Flavin-containing monooxygenase, PFAM = PF13738)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00013594ctg000_1-4683' '(at5g54830 : 1165.0) DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39929 : 353.0) no description available & (gnl|cdd|47940 : 114.0) no description available & (reliability: 2330.0) & (original description: Putative At5g54830, Description = Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830, PFAM = PF03188;PF10517;PF03351;PF03351)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00016768ctg006_431-4294' '(p29162|ntp3_tobac : 1068.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 767.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 149.0) no description available & (reliability: 1534.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00018840ctg002_1-861' '(at2g43020 : 183.0) polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|35252 : 95.8) no description available & (reliability: 366.0) & (original description: Putative PAO2, Description = Putative polyamine oxidase 4, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00020337ctg011_21062-24757' '(at1g14130 : 357.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14120.1); Has 6919 Blast hits to 6851 proteins in 822 species: Archae - 0; Bacteria - 798; Metazoa - 89; Fungi - 567; Plants - 4661; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (gnl|cdd|35365 : 231.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (q40634|acco1_orysa : 114.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative DAO, Description = 2-oxoglutarate-dependent dioxygenase DAO, PFAM = PF14226;PF03171)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00022329ctg000_1-5625' '(at5g06580 : 270.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30625 : 117.0) no description available & (gnl|cdd|36445 : 110.0) no description available & (reliability: 540.0) & (original description: Putative dld, Description = D-Lactate dehydrogenase, cytochrome c-dependent, PFAM = PF01565)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00028198ctg002_6646-12271' '(at1g76160 : 819.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 617.0) no description available & (p29162|ntp3_tobac : 580.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 144.0) no description available & (reliability: 1570.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00029134ctg009_1-2436' '(at1g04610 : 527.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 274.0) no description available & (gnl|cdd|32255 : 196.0) no description available & (reliability: 1054.0) & (original description: Putative YUC9, Description = Probable indole-3-pyruvate monooxygenase YUCCA9, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00041131ctg005_486-6516' '(at1g23010 : 772.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 141.0) no description available & (reliability: 1544.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07732;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00044368ctg001_1-4763' '(at5g18900 : 346.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 192.0) no description available & (gnl|cdd|47971 : 118.0) no description available & (reliability: 692.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase subunit alpha-1, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00045302ctg003_3950-7742' '(p29162|ntp3_tobac : 942.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55560 : 760.0) SKU5 similar 14 (sks14); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 13 (TAIR:AT3G13400.1); Has 5179 Blast hits to 5121 proteins in 953 species: Archae - 12; Bacteria - 1596; Metazoa - 272; Fungi - 1874; Plants - 1269; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36477 : 579.0) no description available & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1520.0) & (original description: Putative p303, Description = 1-ascorbate oxidase, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00050397ctg002_576-6761' '(at3g24200 : 141.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: FAD binding, monooxygenase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; INVOLVED IN: oxidation reduction, ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (InterPro:IPR010971), Monooxygenase, FAD-binding (InterPro:IPR002938), Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site (InterPro:IPR018168); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative COQ6, Description = Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial, PFAM = )' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101ctg15851_2247-5335' '(at5g16990 : 358.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36410 : 349.0) no description available & (gnl|cdd|32313 : 243.0) no description available & (reliability: 716.0) & (original description: Putative ADH3, Description = Putative NADP-dependent oxidoreductase P1, PFAM = PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00083_434030-439220' '(at5g66060 : 424.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1). & (gnl|cdd|36804 : 278.0) no description available & (gnl|cdd|47971 : 158.0) no description available & (reliability: 848.0) & (original description: Putative P4H10, Description = Probable prolyl 4-hydroxylase 10, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00152_923984-939461' '(at4g16310 : 1363.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|35252 : 414.0) no description available & (gnl|cdd|85554 : 278.0) no description available & (o64411|pao_maize : 94.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2726.0) & (original description: Putative LDL3, Description = Lysine-specific histone demethylase 1 homolog 3, PFAM = PF04433;PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 452.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00422_189563-193441' '(at4g29720 : 556.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 373.0) no description available & (gnl|cdd|85554 : 197.0) no description available & (reliability: 1112.0) & (original description: Putative PAO4, Description = Putative polyamine oxidase 5, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00428_1250748-1254655' '(at2g35660 : 522.0) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37825 : 364.0) no description available & (gnl|cdd|30999 : 177.0) no description available & (q40412|aba2_nicpl : 87.8) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1044.0) & (original description: Putative CTF2A, Description = CTF2A like oxidoreductase, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00461_472498-476087' '(at4g29720 : 556.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 387.0) no description available & (gnl|cdd|85554 : 208.0) no description available & (reliability: 1112.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00539_590033-597295' '(at1g20270 : 436.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G66060.1); Has 2479 Blast hits to 2467 proteins in 338 species: Archae - 0; Bacteria - 393; Metazoa - 997; Fungi - 73; Plants - 409; Viruses - 15; Other Eukaryotes - 592 (source: NCBI BLink). & (gnl|cdd|36804 : 278.0) no description available & (gnl|cdd|47971 : 159.0) no description available & (reliability: 872.0) & (original description: Putative P4H3, Description = Probable prolyl 4-hydroxylase 3, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00751_335415-364025' '(at5g16970 : 182.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36410 : 179.0) no description available & (gnl|cdd|32313 : 109.0) no description available & (reliability: 364.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF16884)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 578.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00803_90942-95245' '(at5g67290 : 462.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38063 : 365.0) no description available & (gnl|cdd|31009 : 142.0) no description available & (reliability: 924.0) & (original description: Putative At5g67290, Description = FAD-dependent oxidoreductase-like protein, PFAM = PF01266)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00863_784814-788889' '(at1g55570 : 785.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 780.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 568.0) no description available & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1570.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 470.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01130_91100-95076' '(at1g48910 : 415.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 217.0) no description available & (gnl|cdd|32255 : 175.0) no description available & (reliability: 830.0) & (original description: Putative YUC11, Description = Probable indole-3-pyruvate monooxygenase YUCCA11, PFAM = PF13738)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01155_1-12703' '(at1g23740 : 409.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 216.0) no description available & (gnl|cdd|36412 : 208.0) no description available & (q8h0m1|qorh_spiol : 87.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 818.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF08240;PF13602)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01184_882015-886987' '(gnl|cdd|36410 : 433.0) no description available & (at5g16990 : 422.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 321.0) no description available & (reliability: 844.0) & (original description: Putative DBR, Description = 2-alkenal reductase (NADP(+)-dependent), PFAM = PF16884;PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01272_127990-145983' '(at1g49670 : 907.0) molecular function has not been defined. Was shown involved in oxidative stress tolerance.; NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1). & (gnl|cdd|39371 : 225.0) no description available & (gnl|cdd|32313 : 195.0) no description available & (reliability: 1814.0) & (original description: Putative Zadh2, Description = Zinc-binding alcohol dehydrogenase domain-containing protein 2, PFAM = PF00106;PF08240;PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01545_15935-21825' '(at5g11330 : 482.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1). & (gnl|cdd|37825 : 244.0) no description available & (gnl|cdd|82164 : 154.0) no description available & (reliability: 964.0) & (original description: Putative BnaC09g45280D, Description = BnaC09g45280D protein, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01974_51075-55014' '(at2g22260 : 318.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 1561 Blast hits to 1561 proteins in 515 species: Archae - 0; Bacteria - 839; Metazoa - 118; Fungi - 181; Plants - 86; Viruses - 14; Other Eukaryotes - 323 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative Os06g0286310, Description = Os06g0286310 protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01976_79323-83983' '(at3g13682 : 974.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.; LSD1-like2 (LDL2); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 5703 Blast hits to 5142 proteins in 914 species: Archae - 48; Bacteria - 2121; Metazoa - 1514; Fungi - 564; Plants - 617; Viruses - 0; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|35252 : 469.0) no description available & (gnl|cdd|85554 : 245.0) no description available & (o64411|pao_maize : 106.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1948.0) & (original description: Putative LDL2, Description = Lysine-specific histone demethylase 1 homolog 2, PFAM = PF04433;PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01985_223795-227585' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 218.0) no description available & (gnl|cdd|32255 : 180.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF13738)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02059_525533-531686' '(at1g19250 : 362.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 153.0) no description available & (gnl|cdd|36613 : 151.0) no description available & (reliability: 724.0) & (original description: Putative Os04g0223500, Description = OSJNBb0072N21.3 protein, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02122_72977-79114' '(at2g17970 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 218.0) no description available & (reliability: 740.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02142_32483-36090' '(at4g29720 : 564.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 371.0) no description available & (gnl|cdd|85554 : 214.0) no description available & (o64411|pao_maize : 85.5) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1128.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02201_7274-73562' '(at1g19250 : 272.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 82.3) no description available & (reliability: 544.0) & (original description: Putative PGSC0003DMG400018660, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02236_263282-266859' '(at4g29720 : 552.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 381.0) no description available & (gnl|cdd|85554 : 204.0) no description available & (reliability: 1104.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02244_83652-88374' '(at4g15760 : 335.0) Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA).; monooxygenase 1 (MO1); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: response to bacterium; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G15765.1). & (gnl|cdd|37825 : 288.0) no description available & (gnl|cdd|30999 : 161.0) no description available & (reliability: 670.0) & (original description: Putative MO1, Description = Monooxygenase 1, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 488.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02319_999893-1004542' '(at5g25620 : 621.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 309.0) no description available & (gnl|cdd|32255 : 177.0) no description available & (reliability: 1242.0) & (original description: Putative YUC6, Description = Indole-3-pyruvate monooxygenase YUCCA6, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02552_306419-317368' '(at5g05320 : 357.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 274.0) no description available & (gnl|cdd|30999 : 130.0) no description available & (reliability: 714.0) & (original description: Putative MO2, Description = 3-hydroxybenzoate 6-hydroxylase 1, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02569_1926-19786' '(at4g12290 : 986.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|36400 : 820.0) no description available & (gnl|cdd|85290 : 588.0) no description available & (q43077|amo_pea : 511.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1972.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF01179;PF02727)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02794_727356-730486' '(at2g32300 : 108.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|66026 : 104.0) no description available & (q41001|bcp_pea : 87.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02794_727386-730831' '(at2g32300 : 108.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (q41001|bcp_pea : 86.7) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: Putative Os08g0137900, Description = Os08g0137900 protein, PFAM = PF02298)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02803_311307-317052' '(at3g10390 : 1038.0) Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.; FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). & (gnl|cdd|35252 : 474.0) no description available & (gnl|cdd|85554 : 249.0) no description available & (o64411|pao_maize : 97.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2076.0) & (original description: Putative FLD, Description = Protein FLOWERING LOCUS D, PFAM = PF04433;PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02849_179300-184729' '(at5g66920 : 736.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 591.0) no description available & (p29162|ntp3_tobac : 559.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 129.0) no description available & (reliability: 1472.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02864_1149733-1155286' '(at2g17970 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 227.0) no description available & (reliability: 774.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02922_316223-320973' '(at5g07800 : 689.0) Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G61290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36613 : 396.0) no description available & (gnl|cdd|32255 : 144.0) no description available & (reliability: 1378.0) & (original description: Putative At5g07800, Description = Flavin-containing monooxygenase FMO GS-OX-like 9, PFAM = PF00743;PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02994_286039-293393' '(at1g23010 : 784.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 142.0) no description available & (reliability: 1568.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07731;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03009_18834-28184' '(at4g33910 : 385.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G23096.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36804 : 212.0) no description available & (gnl|cdd|47971 : 134.0) no description available & (reliability: 770.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase alpha-like protein, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03046_140955-146543' '(at2g36690 : 455.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 300.0) no description available & (p51091|ldox_maldo : 190.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 176.0) no description available & (reliability: 910.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03128_935460-941443' '(at5g05320 : 379.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 287.0) no description available & (gnl|cdd|30999 : 154.0) no description available & (reliability: 758.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03141_1112722-1118204' '(at1g76160 : 807.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 607.0) no description available & (q00624|aso_brana : 542.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 138.0) no description available & (reliability: 1482.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03208_60045-74165' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 220.0) no description available & (gnl|cdd|32255 : 168.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03263_390999-394430' '(at4g28720 : 624.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 308.0) no description available & (gnl|cdd|32255 : 184.0) no description available & (reliability: 1248.0) & (original description: Putative YUC8, Description = Probable indole-3-pyruvate monooxygenase YUCCA8, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03446_994486-997943' '(gnl|cdd|35365 : 277.0) no description available & (at2g36690 : 226.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51091|ldox_maldo : 172.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 169.0) no description available & (reliability: 452.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03735_256649-263293' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 244.0) no description available & (reliability: 976.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03934_324022-327845' '(at4g28720 : 638.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 296.0) no description available & (gnl|cdd|32255 : 186.0) no description available & (reliability: 1276.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04020_379955-386706' '(at1g65840 : 686.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 417.0) no description available & (gnl|cdd|85554 : 246.0) no description available & (o64411|pao_maize : 135.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1372.0) & (original description: Putative PAO4, Description = Probable polyamine oxidase 4, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04294_332214-337431' '(at1g19250 : 355.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 176.0) no description available & (gnl|cdd|36613 : 168.0) no description available & (reliability: 710.0) & (original description: Putative PGSC0003DMG400014673, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04621_15864-21327' '(at2g36690 : 448.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 291.0) no description available & (gnl|cdd|33294 : 185.0) no description available & (p51091|ldox_maldo : 179.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 896.0) & (original description: Putative BnaA05g07660D, Description = BnaA05g07660D protein, PFAM = PF14226;PF03171)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04674_24452-51638' '(at5g18900 : 448.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 269.0) no description available & (gnl|cdd|47971 : 154.0) no description available & (reliability: 896.0) & (original description: Putative P4H4, Description = Probable prolyl 4-hydroxylase 4, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04711_103725-111530' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p29162|ntp3_tobac : 578.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1598.0) & (original description: Putative sks7, Description = SKU5 similar 7 protein, PFAM = PF07731;PF00394;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04764_17862-22318' '(at5g25620 : 592.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 295.0) no description available & (gnl|cdd|32255 : 171.0) no description available & (reliability: 1184.0) & (original description: Putative YUC6, Description = Indole-3-pyruvate monooxygenase YUCCA6, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04875_656415-661849' '(at2g36690 : 452.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 299.0) no description available & (p51091|ldox_maldo : 189.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 904.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF14226;PF03171)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05030_526471-532296' '(at4g25240 : 797.0) Encodes GPI-anchored SKU5-like protein.; SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36477 : 573.0) no description available & (q00624|aso_brana : 439.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 141.0) no description available & (reliability: 1594.0) & (original description: Putative SKS1, Description = Monocopper oxidase-like protein SKS1, PFAM = PF00394;PF07732;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05087_759579-764708' '(at4g37160 : 710.0) SKU5 similar 15 (sks15); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 16 (TAIR:AT2G23630.1); Has 5537 Blast hits to 5515 proteins in 1034 species: Archae - 14; Bacteria - 1701; Metazoa - 277; Fungi - 2124; Plants - 1252; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|36477 : 576.0) no description available & (p29162|ntp3_tobac : 554.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 135.0) no description available & (reliability: 1420.0) & (original description: Putative sks16, Description = Protein SKU5 similar 16, PFAM = PF00394;PF07732;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05348_104271-107569' '(at3g17675 : 106.0) Encodes a Plantacyanin/Basic blue family protein; Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1434 Blast hits to 1387 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1434; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (q41001|bcp_pea : 89.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 200.0) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05385_250978-258812' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (q00624|aso_brana : 574.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1592.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF00394;PF07731;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05395_499405-504754' '(at1g19250 : 324.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|36613 : 150.0) no description available & (gnl|cdd|84997 : 134.0) no description available & (reliability: 648.0) & (original description: Putative uaz122, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05438_415214-421832' '(at4g22010 : 810.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 601.0) no description available & (q00624|aso_brana : 550.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 137.0) no description available & (reliability: 1620.0) & (original description: Putative sks4, Description = At4g22010, PFAM = PF00394;PF07731;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05472_66669-71521' '(at5g54830 : 1162.0) DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39929 : 354.0) no description available & (gnl|cdd|47940 : 110.0) no description available & (reliability: 2324.0) & (original description: Putative At5g54830, Description = Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830, PFAM = PF01578;PF03351;PF03351;PF10517)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05649_524049-530874' '(gnl|cdd|36410 : 515.0) no description available & (at5g16970 : 513.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 350.0) no description available & (reliability: 1026.0) & (original description: Putative DBR, Description = 2-alkenal reductase (NADP(+)-dependent), PFAM = PF16884;PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05682_79710-84893' '(at1g19250 : 681.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|36613 : 219.0) no description available & (gnl|cdd|84997 : 150.0) no description available & (reliability: 1362.0) & (original description: Putative FMO1, Description = Probable flavin-containing monooxygenase 1, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05820_35230-39688' '(at4g14940 : 785.0) atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development.; amine oxidase 1 (AO1); FUNCTIONS IN: primary amine oxidase activity, copper ion binding; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1545 Blast hits to 1541 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 250; Fungi - 453; Plants - 241; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|36400 : 697.0) no description available & (q43077|amo_pea : 629.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (gnl|cdd|83851 : 489.0) no description available & (reliability: 1570.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02727;PF02728;PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05858_91931-101468' '(at2g42490 : 1233.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 774.0) no description available & (gnl|cdd|36400 : 659.0) no description available & (q43077|amo_pea : 237.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2466.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF01179;PF02728)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06094_193699-196824' '(gnl|cdd|66026 : 104.0) no description available & (at2g32300 : 102.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (q41001|bcp_pea : 85.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 204.0) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06267_338954-345391' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 241.0) no description available & (reliability: 980.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06542_179812-186982' '(gnl|cdd|36410 : 505.0) no description available & (at5g16990 : 499.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 349.0) no description available & (reliability: 998.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107;PF16884)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06757_10145-16838' '(at1g65840 : 697.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 412.0) no description available & (gnl|cdd|85554 : 242.0) no description available & (o64411|pao_maize : 124.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1394.0) & (original description: Putative PO, Description = Polyamine oxidase, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07253_260521-266880' '(at1g65840 : 694.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 410.0) no description available & (gnl|cdd|85554 : 244.0) no description available & (o64411|pao_maize : 129.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1388.0) & (original description: Putative PAO2, Description = Putative polyamine oxidase 4, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07516_341921-345607' '(at1g23740 : 266.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 190.0) no description available & (gnl|cdd|36412 : 159.0) no description available & (q8h0m1|qorh_spiol : 141.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 532.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF13602;PF08240)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07607_404104-411221' '(at4g33910 : 394.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G23096.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36804 : 211.0) no description available & (gnl|cdd|47971 : 135.0) no description available & (reliability: 788.0) & (original description: Putative P4H9, Description = Probable prolyl 4-hydroxylase 9, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07673_94905-107700' '(gnl|cdd|36410 : 289.0) no description available & (gnl|cdd|32313 : 282.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07974_114663-119357' '(at5g11320 : 603.0) Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.; YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 12265 Blast hits to 12250 proteins in 1811 species: Archae - 85; Bacteria - 7080; Metazoa - 781; Fungi - 1596; Plants - 658; Viruses - 0; Other Eukaryotes - 2065 (source: NCBI BLink). & (gnl|cdd|36613 : 283.0) no description available & (gnl|cdd|32255 : 157.0) no description available & (reliability: 1206.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08039_280627-292430' '(gnl|cdd|36410 : 282.0) no description available & (gnl|cdd|32313 : 280.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08047_296441-332148' '(at1g76160 : 826.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 619.0) no description available & (p29162|ntp3_tobac : 583.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 143.0) no description available & (reliability: 1574.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08072_179050-221882' '(at5g06580 : 865.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 452.0) no description available & (gnl|cdd|30625 : 347.0) no description available & (reliability: 1730.0) & (original description: Putative DLD, Description = D-lactate dehydrogenase [cytochrome], mitochondrial, PFAM = PF02913;PF01565)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08072_184773-210586' '(at5g06580 : 468.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 279.0) no description available & (gnl|cdd|30625 : 205.0) no description available & (reliability: 936.0) & (original description: Putative dld, Description = Lactate dehydrogenase, PFAM = PF02913;PF01565)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08293_10851-19073' '(at5g61510 : 556.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36411 : 447.0) no description available & (gnl|cdd|83461 : 318.0) no description available & (reliability: 1112.0) & (original description: Putative qor, Description = Quinone oxidoreductase, PFAM = PF08240;PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08767_4772-10173' '(gnl|cdd|36410 : 430.0) no description available & (at5g16990 : 420.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 318.0) no description available & (reliability: 840.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107;PF16884)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08834_70631-78241' '(at5g66060 : 474.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1). & (gnl|cdd|36804 : 279.0) no description available & (gnl|cdd|47971 : 159.0) no description available & (reliability: 948.0) & (original description: Putative P4H10, Description = Probable prolyl 4-hydroxylase 10, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09150_267813-273087' '(at5g18900 : 433.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 271.0) no description available & (gnl|cdd|47971 : 153.0) no description available & (reliability: 866.0) & (original description: Putative P4H4, Description = Probable prolyl 4-hydroxylase 4, PFAM = PF01549;PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09456_67273-72617' '(at2g35660 : 602.0) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37825 : 385.0) no description available & (gnl|cdd|30999 : 174.0) no description available & (q40412|aba2_nicpl : 103.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1204.0) & (original description: Putative CTF2A, Description = CTF2A like oxidoreductase, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09459_97784-111137' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 220.0) no description available & (gnl|cdd|32255 : 162.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_128279-136878' '(at4g13010 : 481.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 457.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (gnl|cdd|36412 : 224.0) no description available & (gnl|cdd|30949 : 198.0) no description available & (reliability: 962.0) & (original description: Putative At4g13010, Description = Putative quinone-oxidoreductase homolog, chloroplastic, PFAM = PF13602;PF08240)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_155345-159813' '(q8h0m1|qorh_spiol : 415.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (at4g13010 : 408.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (gnl|cdd|36412 : 210.0) no description available & (gnl|cdd|30949 : 182.0) no description available & (reliability: 816.0) & (original description: Putative QOD1, Description = Quinone-oxidoreductase-like protein, PFAM = PF08240;PF13602)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_162665-166243' '(at4g13010 : 436.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 429.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (gnl|cdd|36412 : 209.0) no description available & (gnl|cdd|30949 : 185.0) no description available & (reliability: 872.0) & (original description: Putative QOD1, Description = Quinone-oxidoreductase-like protein, PFAM = PF08240;PF13602)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10326_159526-163676' '(at4g28720 : 650.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 306.0) no description available & (gnl|cdd|32255 : 184.0) no description available & (reliability: 1300.0) & (original description: Putative YUC8, Description = Probable indole-3-pyruvate monooxygenase YUCCA8, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10336_401234-408293' '(at4g15760 : 360.0) Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA).; monooxygenase 1 (MO1); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: response to bacterium; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G15765.1). & (gnl|cdd|37825 : 299.0) no description available & (gnl|cdd|30999 : 159.0) no description available & (reliability: 720.0) & (original description: Putative MO1, Description = Monooxygenase 1, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10815_144079-147952' '(at4g28720 : 630.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 299.0) no description available & (gnl|cdd|32255 : 187.0) no description available & (reliability: 1260.0) & (original description: Putative YUC5, Description = Probable indole-3-pyruvate monooxygenase YUCCA5, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11188_2677-6825' '(at1g21430 : 462.0) YUC11; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-containing monooxygenase family protein (TAIR:AT1G48910.1); Has 9762 Blast hits to 9749 proteins in 1331 species: Archae - 35; Bacteria - 5524; Metazoa - 772; Fungi - 1287; Plants - 602; Viruses - 0; Other Eukaryotes - 1542 (source: NCBI BLink). & (gnl|cdd|36613 : 211.0) no description available & (gnl|cdd|32255 : 145.0) no description available & (reliability: 924.0) & (original description: Putative YUC11, Description = Probable indole-3-pyruvate monooxygenase YUCCA11, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11484_135895-141752' '(at4g38540 : 392.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (gnl|cdd|37825 : 298.0) no description available & (gnl|cdd|30999 : 145.0) no description available & (reliability: 784.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11646_347846-351975' '(at1g04610 : 625.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 302.0) no description available & (gnl|cdd|32255 : 189.0) no description available & (reliability: 1250.0) & (original description: Putative YUC3, Description = Probable indole-3-pyruvate monooxygenase YUCCA3, PFAM = PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf13411_17069-26358' '(at2g43020 : 823.0) polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|35252 : 455.0) no description available & (gnl|cdd|85554 : 261.0) no description available & (o64411|pao_maize : 142.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1646.0) & (original description: Putative PAO2, Description = Probable polyamine oxidase 2, PFAM = PF01593)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf14102_38398-41102' '(gnl|cdd|36410 : 364.0) no description available & (at5g16970 : 338.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 303.0) no description available & (reliability: 676.0) & (original description: Putative P1, Description = NADP-dependent alkenal double bond reductase P1, PFAM = PF16884;PF00107)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf15515_98910-104697' '(at1g12140 : 419.0) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates; flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink). & (gnl|cdd|36613 : 383.0) no description available & (gnl|cdd|84997 : 149.0) no description available & (reliability: 838.0) & (original description: Putative FMO3, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf15645_267198-274666' '(at2g42490 : 1249.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 782.0) no description available & (gnl|cdd|36400 : 659.0) no description available & (q43077|amo_pea : 231.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2498.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF02727;PF02728;PF01179)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf16156_110590-118268' '(at5g66920 : 786.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 594.0) no description available & (p29162|ntp3_tobac : 567.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 132.0) no description available & (reliability: 1572.0) & (original description: Putative sks17, Description = AT5g66920/MUD21_18, PFAM = PF07732;PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 778.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 622.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17372_186993-195220' '(at1g56000 : 489.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G55980.1); Has 2116 Blast hits to 2116 proteins in 458 species: Archae - 21; Bacteria - 792; Metazoa - 16; Fungi - 22; Plants - 126; Viruses - 0; Other Eukaryotes - 1139 (source: NCBI BLink). & (gnl|cdd|33187 : 188.0) no description available & (reliability: 978.0) & (original description: Putative At1g56000, Description = AT1G56000 protein, PFAM = PF13450)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17839_158505-170831' '(p29162|ntp3_tobac : 787.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 746.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 576.0) no description available & (gnl|cdd|87357 : 147.0) no description available & (reliability: 1492.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf19504_34869-39118' '(at1g55570 : 793.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 786.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 144.0) no description available & (reliability: 1586.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf23821_13149-18766' '(at3g28480 : 430.0) Oxoglutarate/iron-dependent oxygenase; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: Oxoglutarate/iron-dependent oxygenase (TAIR:AT3G28490.1). & (gnl|cdd|36804 : 263.0) no description available & (gnl|cdd|47971 : 145.0) no description available & (reliability: 860.0) & (original description: Putative P4H7, Description = Probable prolyl 4-hydroxylase 7, PFAM = PF13640)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf34287_2302-7851' '(at4g22010 : 737.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p29162|ntp3_tobac : 530.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 141.0) no description available & (reliability: 1474.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T
'26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf34287_11700-16691' '(at1g76160 : 786.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 612.0) no description available & (q00624|aso_brana : 554.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1544.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold335_1-2830' '(at3g27540 : 305.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 232.0) no description available & (reliability: 600.0) & (original description: Putative poGNT3, Description = Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold2564_40489-44599' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 566.0) no description available & (reliability: 1314.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold12868_19461-23158' '(at5g44380 : 375.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 103.0) no description available & (reliability: 750.0) & (original description: Putative T440, Description = Berberine bridge enzyme like protein, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold15667_31731-37970' '(at5g06060 : 374.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 268.0) no description available & (gnl|cdd|35944 : 242.0) no description available & (q75kh3|grdh_orysa : 104.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 748.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold17248_212-5801' '(at2g29260 : 171.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 145.0) no description available & (gnl|cdd|35944 : 137.0) no description available & (reliability: 342.0) & (original description: Putative tr, Description = Tropinone reductase I, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold21158_2085-32493' '(at3g29770 : 346.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 128.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: Putative SP1L1, Description = Protein SPIRAL1-like 1, PFAM = PF00561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold28158_14842-25147' '(at4g34880 : 272.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 246.0) no description available & (gnl|cdd|36425 : 220.0) no description available & (reliability: 544.0) & (original description: Putative BnaA01g02320D, Description = BnaA01g02320D protein, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold33298_5283-8417' '(at4g20860 : 464.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 103.0) no description available & (reliability: 928.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold43726_13892-17577' '(at5g44440 : 374.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 104.0) no description available & (reliability: 748.0) & (original description: Putative BBE1, Description = Reticuline oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold53099_1-14079' '(at5g13690 : 202.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 192.0) no description available & (gnl|cdd|37444 : 171.0) no description available & (reliability: 404.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold57416_919-10753' '(at5g13690 : 222.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 212.0) no description available & (gnl|cdd|37444 : 189.0) no description available & (reliability: 444.0) & (original description: Putative nglA, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold68423_5038-8702' '(at4g20840 : 609.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 1218.0) & (original description: Putative BBE1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold70197_1598-9260' '(at4g09900 : 505.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 141.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 990.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold77305_1184-7707' '(at4g09900 : 479.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 144.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative Sb07g001070, Description = Putative uncharacterized protein Sb07g001070, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold113968_1-1657' '(at1g26360 : 185.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.; methyl esterase 13 (MES13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 15 (TAIR:AT1G69240.1); Has 2167 Blast hits to 2165 proteins in 544 species: Archae - 4; Bacteria - 1224; Metazoa - 16; Fungi - 61; Plants - 637; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative RHS9, Description = Esterase PIR7B, putative, PFAM = )' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold106_854363-861604' '(at5g13690 : 162.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 162.0) no description available & (gnl|cdd|37444 : 133.0) no description available & (reliability: 324.0) & (original description: Putative naglu, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold106_863913-867593' '(gnl|cdd|68654 : 259.0) no description available & (at5g13690 : 251.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37444 : 200.0) no description available & (reliability: 502.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF12972)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 336.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold393_53224-86032' '(at5g07360 : 781.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 287.0) no description available & (gnl|cdd|36425 : 187.0) no description available & (reliability: 1562.0) & (original description: Putative A19, Description = Amidase-like protein, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold457_284347-295186' '(at5g06060 : 279.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 194.0) no description available & (gnl|cdd|77008 : 194.0) no description available & (q75kh3|grdh_orysa : 85.9) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 558.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF00106;PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold697_334947-338632' '(at5g44380 : 380.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 106.0) no description available & (reliability: 760.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1122_744013-750706' '(at1g08980 : 468.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (gnl|cdd|76569 : 368.0) no description available & (gnl|cdd|36425 : 258.0) no description available & (reliability: 936.0) & (original description: Putative AMI1, Description = Amidase 1, PFAM = PF01425;PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1204_468565-474760' '(at2g29260 : 406.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 266.0) no description available & (gnl|cdd|35944 : 241.0) no description available & (q75kh3|grdh_orysa : 109.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 812.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1709_256605-267327' '(at5g07360 : 793.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 294.0) no description available & (gnl|cdd|36425 : 204.0) no description available & (reliability: 1586.0) & (original description: Putative NP81, Description = Amidase family protein, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold2645_262763-276623' '(at4g34880 : 513.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 387.0) no description available & (gnl|cdd|36425 : 294.0) no description available & (reliability: 1026.0) & (original description: Putative pam, Description = Peptide amidase, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold2882_50968-58441' '(at1g72970 : 814.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 519.0) no description available & (gnl|cdd|32458 : 190.0) no description available & (reliability: 1628.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3142_188003-195091' '(at5g07360 : 777.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 286.0) no description available & (gnl|cdd|36425 : 167.0) no description available & (reliability: 1554.0) & (original description: Putative gatA, Description = Amidase, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3358_5761-9741' '(at5g06060 : 326.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 247.0) no description available & (gnl|cdd|35944 : 217.0) no description available & (q75kh3|grdh_orysa : 99.4) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 652.0) & (original description: Putative trI, Description = Tropinone reductase, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3790_39823-42712' '(at2g23610 : 221.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 196.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00004679ctg015_4026-10773' '(at5g07360 : 782.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 287.0) no description available & (gnl|cdd|36425 : 186.0) no description available & (reliability: 1564.0) & (original description: Putative A19, Description = Amidase-like protein, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00011453ctg001_31952-38623' '(at5g06060 : 372.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 272.0) no description available & (gnl|cdd|35944 : 241.0) no description available & (q75kh3|grdh_orysa : 103.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 744.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00018124ctg006_1114-9641' '(at5g13690 : 580.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 551.0) no description available & (gnl|cdd|37444 : 425.0) no description available & (reliability: 1160.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12972)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00022646ctg004_7329-9767' '(at2g23610 : 216.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 200.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: Putative MES3, Description = Methylesterase 3, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00032865ctg005_266-3889' '(at1g44820 : 431.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 329.0) no description available & (gnl|cdd|30969 : 107.0) no description available & (reliability: 862.0) & (original description: Putative acy1, Description = Aminoacylase-1, PFAM = PF01546)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00033131ctg005_13716-17305' '(at5g44440 : 508.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 128.0) no description available & (reliability: 1016.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00039424ctg007_3283-12766' '(at1g72970 : 799.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 507.0) no description available & (gnl|cdd|32458 : 176.0) no description available & (reliability: 1598.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00034_64571-74404' '(at2g23620 : 314.0) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.; methyl esterase 1 (MES1); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: acetone-cyanohydrin lyase (TAIR:AT2G23600.1); Has 1884 Blast hits to 1883 proteins in 431 species: Archae - 2; Bacteria - 1054; Metazoa - 5; Fungi - 43; Plants - 631; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (p52704|hnl_hevbr : 228.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 628.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00039_114783-118480' '(at5g44380 : 380.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 107.0) no description available & (reliability: 760.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_594805-598427' '(at4g20860 : 511.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 105.0) no description available & (reliability: 1022.0) & (original description: Putative ADOX1, Description = FAD-dependent oxidoreductase, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_595283-638549' '(at4g20860 : 460.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 920.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_615818-619416' '(at4g20860 : 494.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 110.0) no description available & (reliability: 988.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00211_151477-156190' '(at4g34880 : 459.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 397.0) no description available & (gnl|cdd|36425 : 301.0) no description available & (reliability: 918.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00271_777525-780674' '(at2g34790 : 617.0) MATERNAL EFFECT EMBRYO ARREST 23 (MEE23); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: polar nucleus fusion, embryo development ending in seed dormancy; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30760.1); Has 4988 Blast hits to 4831 proteins in 776 species: Archae - 82; Bacteria - 2407; Metazoa - 5; Fungi - 1644; Plants - 646; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|30625 : 101.0) no description available & (reliability: 1234.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00343_894681-898243' '(at5g44440 : 510.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 118.0) no description available & (reliability: 1020.0) & (original description: Putative NEC5a, Description = Nectarin 5a, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00681_42826-47094' '(at3g27540 : 630.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 536.0) no description available & (reliability: 1248.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00822_93296-101527' '(at5g06060 : 373.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 273.0) no description available & (gnl|cdd|35944 : 243.0) no description available & (q75kh3|grdh_orysa : 104.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 746.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00869_98070-135059' '(at5g13690 : 1148.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 1014.0) no description available & (gnl|cdd|37444 : 828.0) no description available & (reliability: 2296.0) & (original description: Putative NAGLU, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12972;PF12971)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00944_88388-91989' '(at5g44440 : 542.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 118.0) no description available & (reliability: 1084.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01060_73528-77168' '(at5g44400 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6440 Blast hits to 6338 proteins in 980 species: Archae - 110; Bacteria - 3349; Metazoa - 50; Fungi - 1662; Plants - 680; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|30625 : 106.0) no description available & (reliability: 1226.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01061_712196-715791' '(at1g30700 : 594.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 97.2) no description available & (reliability: 1188.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01061_781598-785160' '(at4g20860 : 507.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 110.0) no description available & (reliability: 1014.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01281_6431-16087' '(at4g20840 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 105.0) no description available & (reliability: 1226.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_266862-270502' '(at1g30760 : 644.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 102.0) no description available & (reliability: 1288.0) & (original description: Putative MEE23, Description = FAD-binding and BBE domain-containing protein, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_294148-297743' '(at1g30700 : 581.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 1162.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_354902-374260' '(at1g30760 : 409.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 99.2) no description available & (reliability: 818.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_370986-374578' '(at1g30760 : 466.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 128.0) no description available & (reliability: 932.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01505_242739-253927' '(at1g72970 : 795.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 507.0) no description available & (gnl|cdd|32458 : 176.0) no description available & (reliability: 1590.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF05199;PF00732)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01521_69424-73886' '(at1g26360 : 375.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.; methyl esterase 13 (MES13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 15 (TAIR:AT1G69240.1); Has 2167 Blast hits to 2165 proteins in 544 species: Archae - 4; Bacteria - 1224; Metazoa - 16; Fungi - 61; Plants - 637; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q40708|pir7a_orysa : 150.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative MES11, Description = Putative methylesterase 11, chloroplastic, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01596_1093564-1101284' '(at5g07360 : 779.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 286.0) no description available & (gnl|cdd|36425 : 168.0) no description available & (reliability: 1558.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01748_376506-379671' '(at1g30700 : 389.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 91.4) no description available & (reliability: 778.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01847_574475-580146' '(at4g34880 : 467.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 367.0) no description available & (gnl|cdd|36425 : 287.0) no description available & (reliability: 934.0) & (original description: Putative pam, Description = Amidase, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01986_240563-243391' '(gnl|cdd|68654 : 265.0) no description available & (at5g13690 : 255.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37444 : 204.0) no description available & (reliability: 510.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF12972)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02289_569483-1151428' '(at3g29770 : 390.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 159.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 750.0) & (original description: Putative RHS9, Description = Esterase PIR7B, putative, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02406_411931-415283' '(at2g23610 : 218.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 197.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative MES8, Description = Methylesterase 8, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02650_374733-381029' '(at5g06060 : 327.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 200.0) no description available & (reliability: 654.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561;PF00106)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02831_817457-833129' '(at1g72970 : 820.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 517.0) no description available & (gnl|cdd|32458 : 186.0) no description available & (reliability: 1640.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03045_1734517-1738809' '(at1g12990 : 661.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 572.0) no description available & (reliability: 1322.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03143_524911-541888' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 567.0) no description available & (reliability: 1314.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03777_94746-101493' '(at5g07360 : 785.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 288.0) no description available & (gnl|cdd|36425 : 187.0) no description available & (reliability: 1570.0) & (original description: Putative amiD, Description = Amidase, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03941_215174-233543' '(q42965|nrl4_tobac : 655.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (at5g22300 : 561.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|36023 : 535.0) no description available & (gnl|cdd|85033 : 167.0) no description available & (reliability: 1122.0) & (original description: Putative NIT4A, Description = Bifunctional nitrilase/nitrile hydratase NIT4A, PFAM = PF00795)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03949_116844-120541' '(at4g20860 : 382.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 764.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04115_80875-88797' '(at4g09900 : 488.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 142.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 954.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04243_49075-54086' '(at5g06060 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 237.0) no description available & (gnl|cdd|77008 : 215.0) no description available & (q75kh3|grdh_orysa : 89.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04403_47197-51919' '(at3g29770 : 348.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 136.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative MES11, Description = Putative methylesterase 11, chloroplastic, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05278_53268-59538' '(at2g29260 : 409.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 266.0) no description available & (gnl|cdd|35944 : 244.0) no description available & (q75kh3|grdh_orysa : 109.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05767_722644-729422' '(at4g34880 : 451.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 379.0) no description available & (gnl|cdd|36425 : 300.0) no description available & (reliability: 902.0) & (original description: Putative pam, Description = Amidase, PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05980_145070-151395' '(at5g06060 : 296.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 218.0) no description available & (q75kh3|grdh_orysa : 98.6) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 592.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06483_31316-35512' '(at1g30760 : 678.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 117.0) no description available & (reliability: 1356.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06483_145593-149179' '(at4g20820 : 453.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44440.1); Has 4739 Blast hits to 4596 proteins in 725 species: Archae - 60; Bacteria - 2023; Metazoa - 34; Fungi - 1711; Plants - 692; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|85533 : 110.0) no description available & (reliability: 906.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06596_472422-489725' '(at1g44820 : 601.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 428.0) no description available & (gnl|cdd|85524 : 143.0) no description available & (reliability: 1202.0) & (original description: Putative ACY1, Description = Aminoacylase-1, PFAM = PF01546)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06866_8928-15621' '(at1g08980 : 468.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (gnl|cdd|76569 : 368.0) no description available & (gnl|cdd|36425 : 258.0) no description available & (reliability: 936.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425;PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07162_482733-501972' '(at5g13690 : 842.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 735.0) no description available & (gnl|cdd|37444 : 684.0) no description available & (reliability: 1684.0) & (original description: Putative NAGLU, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12971;PF12972)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07741_709-4534' '(at1g73050 : 774.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: cyanide biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 10851 Blast hits to 10547 proteins in 1106 species: Archae - 4; Bacteria - 3939; Metazoa - 853; Fungi - 1597; Plants - 293; Viruses - 12; Other Eukaryotes - 4153 (source: NCBI BLink). & (gnl|cdd|36452 : 469.0) no description available & (gnl|cdd|32458 : 177.0) no description available & (reliability: 1548.0) & (original description: Putative MDL2, Description = (R)-mandelonitrile lyase 2, PFAM = PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07788_536502-540549' '(at1g67880 : 623.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink). & (gnl|cdd|68302 : 556.0) no description available & (reliability: 1240.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf08030_510191-517623' '(at4g34880 : 470.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 398.0) no description available & (gnl|cdd|36425 : 304.0) no description available & (reliability: 940.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf08208_461416-465092' '(at4g20840 : 604.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 102.0) no description available & (reliability: 1208.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09087_6239-8638' '(at1g44820 : 158.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 108.0) no description available & (reliability: 316.0) & (original description: Putative acy1, Description = Aminoacylase-1, PFAM = PF01546)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09109_303429-307409' '(at5g06060 : 145.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 141.0) no description available & (gnl|cdd|35944 : 97.4) no description available & (reliability: 290.0) & (original description: Putative TR, Description = Tropinone reductase, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 372.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09595_312099-318645' '(at2g23610 : 228.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q43360|pir7b_orysa : 214.0) Esterase PIR7B (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative MES3, Description = Methylesterase 3, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09670_140312-182508' '(at1g07440 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: response to cadmium ion, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT2G29340.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 243.0) no description available & (gnl|cdd|77008 : 222.0) no description available & (q75kh3|grdh_orysa : 112.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10712_56514-85411' '(at4g08790 : 449.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrilase activity; INVOLVED IN: response to cadmium ion, nitrogen compound metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT5G12040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36025 : 390.0) no description available & (gnl|cdd|30737 : 199.0) no description available & (reliability: 898.0) & (original description: Putative NLP2, Description = Nitrilase-like protein 2, PFAM = PF00795)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10713_2618-15677' '(at4g09900 : 486.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 144.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10974_186471-192164' '(at5g51950 : 652.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36452 : 481.0) no description available & (gnl|cdd|32458 : 157.0) no description available & (reliability: 1304.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf11120_30799-34634' '(at1g73050 : 785.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: cyanide biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 10851 Blast hits to 10547 proteins in 1106 species: Archae - 4; Bacteria - 3939; Metazoa - 853; Fungi - 1597; Plants - 293; Viruses - 12; Other Eukaryotes - 4153 (source: NCBI BLink). & (gnl|cdd|36452 : 473.0) no description available & (gnl|cdd|32458 : 168.0) no description available & (reliability: 1570.0) & (original description: Putative hnl, Description = Glucose-methanol-choline (GMC) oxidoreductase family protein, PFAM = PF00732;PF05199)' T
'26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf12293_319025-330638' '(at4g34880 : 521.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 383.0) no description available & (gnl|cdd|36425 : 295.0) no description available & (reliability: 1042.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold17311_3580-5873' '(gnl|cdd|35627 : 166.0) no description available & (at1g74590 : 165.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (q03662|gstx1_tobac : 129.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48607 : 116.0) no description available & (reliability: 330.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF13417)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold27514_24292-26937' '(gnl|cdd|29388 : 423.0) no description available & (p22195|per1_arahy : 352.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 329.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold60493_601-8897' '(gnl|cdd|36086 : 189.0) no description available & (at2g02390 : 178.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28342|gstz1_diaca : 170.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 146.0) no description available & (reliability: 356.0) & (original description: Putative gst2, Description = Glutathione S-transferase zeta class, PFAM = PF14497;PF13417)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold69099_1-2963' '(q02200|perx_nicsy : 538.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 422.0) no description available & (at1g14550 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold102360_1-1612' '(q02200|perx_nicsy : 213.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 169.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 154.0) no description available & (reliability: 338.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold532_348572-351703' '(q03662|gstx1_tobac : 306.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 210.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 195.0) no description available & (gnl|cdd|48112 : 139.0) no description available & (reliability: 420.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold545_225857-259368' '(at5g41210 : 335.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 153.0) no description available & (gnl|cdd|48599 : 124.0) no description available & (reliability: 670.0) & (original description: Putative gst, Description = Theta class glutathione S-transferase, PFAM = PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold765_131904-139056' '(q03666|gstx4_tobac : 244.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 230.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 180.0) no description available & (gnl|cdd|48607 : 126.0) no description available & (reliability: 460.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold1516_180007-205031' '(gnl|cdd|35627 : 166.0) no description available & (at1g74590 : 160.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (q03662|gstx1_tobac : 132.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48607 : 114.0) no description available & (reliability: 320.0) & (original description: Putative GSTU21, Description = Glutathione S-transferase GST 12, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold3281_135575-140616' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 359.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 331.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben044ctg26110023_534-4601' '(p49332|gstxc_tobac : 290.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78360 : 265.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 21 (GSTU21); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 4807 Blast hits to 4792 proteins in 997 species: Archae - 0; Bacteria - 1971; Metazoa - 328; Fungi - 164; Plants - 1959; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|35627 : 239.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 530.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00008099ctg023_6681-8244' '(q03663|gstx2_tobac : 167.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT35/PCNT111) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 146.0) no description available & (at2g29420 : 141.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48607 : 115.0) no description available & (reliability: 282.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 474.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00037955ctg002_6653-9852' '(at1g74590 : 196.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 189.0) no description available & (p32110|gstx6_soybn : 135.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 111.0) no description available & (reliability: 392.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00049661ctg000_1-3375' '(q03666|gstx4_tobac : 326.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 308.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 247.0) no description available & (gnl|cdd|48112 : 159.0) no description available & (reliability: 616.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00050910ctg001_10786-15452' '(at1g10370 : 228.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 207.0) no description available & (gnl|cdd|48112 : 169.0) no description available & (q06398|gstu6_orysa : 154.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative GSTU17, Description = Glutathione S-transferase U17, PFAM = PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00052917ctg002_2918-5863' '(q03662|gstx1_tobac : 281.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 222.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 217.0) no description available & (gnl|cdd|48112 : 157.0) no description available & (reliability: 444.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben044scf00055160ctg001_2302-5803' '(q03666|gstx4_tobac : 330.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 307.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 250.0) no description available & (gnl|cdd|48112 : 156.0) no description available & (reliability: 614.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00069_270067-273982' '(p46440|gstf2_tobac : 306.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 251.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 182.0) no description available & (gnl|cdd|48114 : 178.0) no description available & (reliability: 502.0) & (original description: Putative gst1, Description = Phi class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00369_468698-472574' '(gnl|cdd|35627 : 188.0) no description available & (at2g29420 : 174.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (p32110|gstx6_soybn : 166.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 138.0) no description available & (reliability: 348.0) & (original description: Putative gst, Description = Glutathione-S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 476.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00612_185251-188482' '(gnl|cdd|35627 : 210.0) no description available & (p32110|gstx6_soybn : 195.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at3g09270 : 182.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 148.0) no description available & (reliability: 364.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF13417)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00897_329016-332835' '(q03666|gstx4_tobac : 337.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 311.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 251.0) no description available & (gnl|cdd|48112 : 163.0) no description available & (reliability: 622.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00897_338585-350294' '(q03666|gstx4_tobac : 341.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 318.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 265.0) no description available & (gnl|cdd|48112 : 166.0) no description available & (reliability: 636.0) & (original description: Putative GSTU21, Description = Glutathione S-transferase U21, PFAM = PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00898_23759-26144' '(at1g10370 : 258.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 225.0) no description available & (q06398|gstu6_orysa : 195.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 145.0) no description available & (reliability: 516.0) & (original description: Putative GSTU17, Description = Glutathione S-transferase U17, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf00898_75861-78865' '(at1g10370 : 250.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 236.0) no description available & (q06398|gstu6_orysa : 206.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 140.0) no description available & (reliability: 500.0) & (original description: Putative gst1, Description = Glutathione S-transferase 1, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01290_100093-105952' '(gnl|cdd|29388 : 428.0) no description available & (p22195|per1_arahy : 409.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 346.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01517_589464-592934' '(p49332|gstxc_tobac : 292.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 270.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 226.0) no description available & (gnl|cdd|48112 : 133.0) no description available & (reliability: 540.0) & (original description: Putative gst1, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01587_21124-25173' '(q02200|perx_nicsy : 520.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 411.0) no description available & (at1g14550 : 394.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 788.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01587_21912-63256' '(q02200|perx_nicsy : 221.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 160.0) no description available & (reliability: 364.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 472.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf01922_723718-727076' '(q03662|gstx1_tobac : 176.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 170.0) no description available & (at2g29470 : 159.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase tau 3 (GSTU3); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 6980 Blast hits to 6962 proteins in 1149 species: Archae - 0; Bacteria - 3652; Metazoa - 620; Fungi - 163; Plants - 1988; Viruses - 0; Other Eukaryotes - 557 (source: NCBI BLink). & (gnl|cdd|48112 : 125.0) no description available & (reliability: 318.0) & (original description: Putative gst, Description = Glutathione-S-transferase, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02086_222514-228919' '(at5g02790 : 293.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 251.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|35627 : 160.0) no description available & (gnl|cdd|48130 : 152.0) no description available & (reliability: 586.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13417;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02105_371684-377120' '(at5g41210 : 328.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 155.0) no description available & (gnl|cdd|48110 : 123.0) no description available & (reliability: 656.0) & (original description: Putative GSTT1, Description = Glutathione S-transferase T1, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02227_518465-525968' '(at5g02790 : 303.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 261.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|48130 : 169.0) no description available & (gnl|cdd|35627 : 165.0) no description available & (reliability: 606.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13410;PF13417)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02325_162475-165235' '(gnl|cdd|35627 : 216.0) no description available & (at2g29420 : 211.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (p32110|gstx6_soybn : 208.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 149.0) no description available & (reliability: 422.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02325_340887-344065' '(gnl|cdd|35627 : 192.0) no description available & (p32110|gstx6_soybn : 157.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at2g29420 : 156.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 149.0) no description available & (reliability: 312.0) & (original description: Putative gstu4, Description = Glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02349_186131-191150' '(p12437|perx_soltu : 435.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 351.0) no description available & (at5g05340 : 201.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02452_431790-434775' '(at1g77290 : 374.0) Glutathione S-transferase family protein; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39621 : 265.0) no description available & (gnl|cdd|30970 : 88.3) no description available & (reliability: 748.0) & (original description: Putative TCHQD, Description = Glutathione S-transferase TCHQD, PFAM = PF13417;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02597_366622-369651' '(at1g77290 : 377.0) Glutathione S-transferase family protein; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39621 : 271.0) no description available & (gnl|cdd|30970 : 89.9) no description available & (reliability: 754.0) & (original description: Putative TCHQD, Description = Glutathione S-transferase TCHQD, PFAM = PF13417;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf02971_87867-94183' '(q03666|gstx4_tobac : 306.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g17180 : 291.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 267.0) no description available & (gnl|cdd|48112 : 175.0) no description available & (reliability: 582.0) & (original description: Putative GSTU28, Description = Glutathione S-transferase U28, PFAM = PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03147_949782-952882' '(q03662|gstx1_tobac : 353.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 232.0) no description available & (at3g09270 : 222.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 146.0) no description available & (reliability: 444.0) & (original description: Putative PRP1, Description = Probable glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03147_1044590-1047725' '(q03664|gstx3_tobac : 325.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT103) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 219.0) no description available & (at3g09270 : 182.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 364.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03147_1101932-1104931' '(q03662|gstx1_tobac : 350.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 201.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 146.0) no description available & (reliability: 402.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03147_1150225-1152958' '(q03662|gstx1_tobac : 284.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 219.0) no description available & (at2g29420 : 167.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 134.0) no description available & (reliability: 334.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03197_198939-202200' '(gnl|cdd|35627 : 203.0) no description available & (q03662|gstx1_tobac : 160.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 156.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 131.0) no description available & (reliability: 312.0) & (original description: Putative gst, Description = Putative glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03263_353341-371228' '(gnl|cdd|35627 : 201.0) no description available & (q03663|gstx2_tobac : 175.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT35/PCNT111) - Nicotiana tabacum (Common tobacco) & (at2g29420 : 169.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 338.0) & (original description: Putative gst, Description = Glutathione s-transferase, putative, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03482_132929-136043' '(at1g74590 : 203.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 193.0) no description available & (p32110|gstx6_soybn : 139.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 116.0) no description available & (reliability: 406.0) & (original description: Putative gst12, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03482_143307-145589' '(at1g74590 : 225.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 221.0) no description available & (p32110|gstx6_soybn : 160.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 120.0) no description available & (reliability: 450.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03861_5373-53350' '(q02200|perx_nicsy : 219.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 187.0) no description available & (at1g14550 : 171.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PMPOX, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03861_71341-74636' '(q02200|perx_nicsy : 542.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 425.0) no description available & (at1g14550 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative PO2, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03861_72298-96245' '(q02200|perx_nicsy : 226.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 177.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 174.0) no description available & (reliability: 354.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141;PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03861_92322-96266' '(q02200|perx_nicsy : 585.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 440.0) no description available & (at1g14550 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03867_87502-93693' '(at4g19880 : 561.0) Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38114 : 447.0) no description available & (gnl|cdd|30784 : 418.0) no description available & (reliability: 1122.0) & (original description: Putative gst, Description = Glutathione transferase, PFAM = PF13409;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf03927_289457-292693' '(gnl|cdd|29388 : 422.0) no description available & (p22195|per1_arahy : 335.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf04174_168197-171856' '(q03666|gstx4_tobac : 418.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 317.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 264.0) no description available & (gnl|cdd|48112 : 172.0) no description available & (reliability: 634.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf04174_178921-186313' '(q03666|gstx4_tobac : 308.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 291.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 240.0) no description available & (gnl|cdd|48112 : 162.0) no description available & (reliability: 582.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF02798;PF02798;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf04174_179310-182244' '(p46417|lgul_soybn : 179.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) - Glycine max (Soybean) & (at1g17180 : 173.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 163.0) no description available & (gnl|cdd|48607 : 123.0) no description available & (reliability: 346.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf05036_8849-13153' '(q03666|gstx4_tobac : 235.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 219.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 208.0) no description available & (gnl|cdd|48112 : 149.0) no description available & (reliability: 438.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf05404_940736-950190' '(q03662|gstx1_tobac : 305.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 234.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 220.0) no description available & (gnl|cdd|48112 : 156.0) no description available & (reliability: 468.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf05680_99473-102344' '(gnl|cdd|35627 : 198.0) no description available & (p32110|gstx6_soybn : 174.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at2g29420 : 164.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 145.0) no description available & (reliability: 328.0) & (original description: Putative GSTU5, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf05952_3553-7798' '(at2g30860 : 198.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase PHI 9 (GSTF9); FUNCTIONS IN: glutathione transferase activity, glutathione peroxidase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to zinc ion, defense response to bacterium, toxin catabolic process, defense response; LOCATED IN: thylakoid, apoplast, chloroplast, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 10 (TAIR:AT2G30870.1); Has 9998 Blast hits to 9981 proteins in 1215 species: Archae - 0; Bacteria - 5032; Metazoa - 1549; Fungi - 611; Plants - 924; Viruses - 0; Other Eukaryotes - 1882 (source: NCBI BLink). & (p46440|gstf2_tobac : 196.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48114 : 174.0) no description available & (gnl|cdd|36085 : 170.0) no description available & (reliability: 396.0) & (original description: Putative GSTF9, Description = Glutathione S-transferase F9, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf06080_31082-34100' '(p32110|gstx6_soybn : 220.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at3g09270 : 215.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 214.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 430.0) & (original description: Putative GSTU1, Description = Glutathione S-transferase U1, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf06291_356518-364020' '(at3g55040 : 315.0) Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro.; glutathione transferase lambda 2 (GSTL2); INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G02790.1); Has 2794 Blast hits to 2712 proteins in 545 species: Archae - 4; Bacteria - 768; Metazoa - 398; Fungi - 95; Plants - 1147; Viruses - 0; Other Eukaryotes - 382 (source: NCBI BLink). & (p49248|in21_maize : 257.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|35627 : 169.0) no description available & (gnl|cdd|48130 : 168.0) no description available & (reliability: 630.0) & (original description: Putative GSTl1, Description = Glutathione S-transferase, PFAM = PF13410;PF13417)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf06883_6517-9794' '(gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 214.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (q03662|gstx1_tobac : 197.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48112 : 128.0) no description available & (reliability: 428.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf06958_249163-253926' '(at1g10370 : 292.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 254.0) no description available & (q06398|gstu6_orysa : 207.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 168.0) no description available & (reliability: 584.0) & (original description: Putative gst1, Description = Glutathione S-transferase 1, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf07253_140858-144390' '(at3g03190 : 250.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase F11 (GSTF11); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase phi 12 (TAIR:AT5G17220.1); Has 10837 Blast hits to 10834 proteins in 1289 species: Archae - 0; Bacteria - 5319; Metazoa - 1959; Fungi - 659; Plants - 879; Viruses - 0; Other Eukaryotes - 2021 (source: NCBI BLink). & (gnl|cdd|36085 : 178.0) no description available & (p46440|gstf2_tobac : 176.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48114 : 160.0) no description available & (reliability: 500.0) & (original description: Putative gst1, Description = Glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf07253_390347-393479' '(at1g65820 : 214.0) microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85252 : 119.0) no description available & (reliability: 428.0) & (original description: Putative MGST3, Description = Microsomal glutathione S-transferase 3, PFAM = PF01124)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf07736_390048-400113' '(at5g41210 : 337.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 158.0) no description available & (gnl|cdd|48110 : 124.0) no description available & (reliability: 674.0) & (original description: Putative GSTT1, Description = Glutathione S-transferase T1, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf08130_36932-40173' '(q03662|gstx1_tobac : 321.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 219.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 213.0) no description available & (gnl|cdd|48112 : 142.0) no description available & (reliability: 438.0) & (original description: Putative GSTU7, Description = Glutathione S-transferase U7, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf08130_55610-58368' '(q03662|gstx1_tobac : 317.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 207.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 414.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf08196_164694-167429' '(p25317|gstxa_tobac : 422.0) Probable glutathione S-transferase parA (EC 2.5.1.18) (Auxin-regulated protein parA) (STR246C protein) - Nicotiana tabacum (Common tobacco) & (at1g17180 : 294.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 249.0) no description available & (gnl|cdd|48112 : 162.0) no description available & (reliability: 588.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf08519_172009-175829' '(gnl|cdd|29388 : 433.0) no description available & (q02200|perx_nicsy : 432.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 372.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf09141_52496-55000' '(gnl|cdd|29388 : 171.0) no description available & (p22195|per1_arahy : 151.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 147.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf09248_342668-346362' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 336.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 312.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative rip1, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf09516_112010-120306' '(gnl|cdd|36086 : 242.0) no description available & (at2g02390 : 237.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28342|gstz1_diaca : 231.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 146.0) no description available & (reliability: 474.0) & (original description: Putative gst2, Description = Maleylacetoacetate isomerase, PFAM = PF13417;PF14497)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf09516_112318-117001' '(p28342|gstz1_diaca : 131.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|36086 : 118.0) no description available & (at2g02390 : 113.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative GST2, Description = Glutathione S-transferase 2, PFAM = )' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10205_68547-71587' '(q03662|gstx1_tobac : 305.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 212.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 205.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 424.0) & (original description: Putative Sb18, Description = Probable glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10228_84775-88917' '(at5g02790 : 316.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 270.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|48130 : 173.0) no description available & (gnl|cdd|35627 : 171.0) no description available & (reliability: 632.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13417;PF13410)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10254_235491-238230' '(gnl|cdd|35627 : 203.0) no description available & (at1g74590 : 198.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (p32110|gstx6_soybn : 150.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 120.0) no description available & (reliability: 396.0) & (original description: Putative GSTU9, Description = Glutathione S-transferase U9, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10316_319490-322653' '(q03662|gstx1_tobac : 385.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 218.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 213.0) no description available & (gnl|cdd|48112 : 142.0) no description available & (reliability: 436.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10316_324668-326979' '(q03662|gstx1_tobac : 191.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 150.0) no description available & (at2g29490 : 142.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 1 (GSTU1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 2 (TAIR:AT2G29480.1); Has 9031 Blast hits to 9013 proteins in 1259 species: Archae - 0; Bacteria - 4823; Metazoa - 1003; Fungi - 192; Plants - 2095; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|48607 : 121.0) no description available & (reliability: 284.0) & (original description: Putative GST180, Description = Glutathione S-transferase, PFAM = PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10316_330848-334176' '(q03662|gstx1_tobac : 254.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 192.0) no description available & (at3g09270 : 181.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 134.0) no description available & (reliability: 362.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf10465_23522-26807' '(p30109|gstf1_tobac : 416.0) Glutathione S-transferase PARB (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 253.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 172.0) no description available & (gnl|cdd|48114 : 170.0) no description available & (reliability: 506.0) & (original description: Putative PARB, Description = Glutathione S-transferase PARB, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf11037_37740-42220' '(p46440|gstf2_tobac : 308.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 258.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 181.0) no description available & (gnl|cdd|48114 : 179.0) no description available & (reliability: 516.0) & (original description: Putative gst1, Description = Phi class glutathione S-transferase, PFAM = PF02798;PF00043)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf11767_235840-239248' '(p49332|gstxc_tobac : 303.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 288.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 244.0) no description available & (gnl|cdd|48112 : 136.0) no description available & (reliability: 576.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf13029_354494-357670' '(gnl|cdd|29388 : 389.0) no description available & (at1g44970 : 257.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22195|per1_arahy : 256.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 474.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.9' 'misc.glutathione S transferases' 'niben101scf15604_49355-55395' '(at2g02390 : 286.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36086 : 275.0) no description available & (p28342|gstz1_diaca : 272.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 154.0) no description available & (reliability: 572.0) & (original description: Putative gst2, Description = Maleylacetoacetate isomerase, PFAM = PF14497;PF13417)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold2433_65368-76063' '(o81970|c71a9_soybn : 556.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|35378 : 514.0) no description available & (at3g26310 : 422.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 308.0) no description available & (reliability: 844.0) & (original description: Putative CYP71A9, Description = Cytochrome P450 71A9, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold2571_1060-6692' '(at2g45550 : 479.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 433.0) no description available & (p37122|c76a2_solme : 378.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 958.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 650.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold4152_19253-24914' '(gnl|cdd|35378 : 447.0) no description available & (at5g10600 : 433.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|84486 : 289.0) no description available & (p48418|c75a1_pethy : 286.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 866.0) & (original description: Putative TCP3, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold6234_54136-58270' '(o48927|c78a3_soybn : 650.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 620.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 345.0) no description available & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1240.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold7643_107-4576' '(at1g19630 : 291.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 269.0) no description available & (gnl|cdd|84486 : 221.0) no description available & (q9axh9|kao1_horvu : 207.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 582.0) & (original description: Putative CYP707A, Description = Abscisic acid 8-hydroxylase 3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold8795_15419-19078' '(o81974|c71d8_soybn : 492.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 468.0) no description available & (at3g26310 : 378.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 311.0) no description available & (reliability: 756.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 730.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold13347_33789-37330' '(at5g63450 : 294.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 293.0) no description available & (gnl|cdd|84486 : 171.0) no description available & (o49858|c82a3_soybn : 92.8) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (reliability: 588.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold22742_21166-28318' '(at1g12740 : 402.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 399.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 226.0) no description available & (gnl|cdd|84486 : 144.0) no description available & (reliability: 804.0) & (original description: Putative Csa6G088710, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold29046_13336-23120' '(o48921|c97b2_soybn : 768.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 718.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 256.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1436.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold37852_214-4947' '(q05047|c72a1_catro : 476.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 458.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 252.0) no description available & (reliability: 916.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold40951_2222-6010' '(at3g48520 : 560.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 367.0) no description available & (gnl|cdd|84486 : 210.0) no description available & (q43068|c82a1_pea : 92.8) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1120.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold50287_1-2247' '(gnl|cdd|35378 : 192.0) no description available & (at3g52970 : 152.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 137.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 116.0) no description available & (reliability: 304.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold54195_7171-12249' '(o49859|c82a4_soybn : 426.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|35378 : 409.0) no description available & (at4g31940 : 393.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|84486 : 264.0) no description available & (reliability: 786.0) & (original description: Putative CYP82A4, Description = Cytochrome P450 82A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold56090_1-5756' '(at3g14690 : 191.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 172.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 80.1) no description available & (reliability: 382.0) & (original description: Putative SCS, Description = Secologanin synthase, PFAM = )' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold58668_6674-10668' '(gnl|cdd|35378 : 476.0) no description available & (at4g37370 : 470.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (q43068|c82a1_pea : 302.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 940.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold72913_2043-7214' '(o49858|c82a3_soybn : 431.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (at4g31940 : 426.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35378 : 418.0) no description available & (gnl|cdd|84486 : 277.0) no description available & (reliability: 852.0) & (original description: Putative cyp82an1, Description = Cytochrome P450 82an1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold78719_751-7419' '(q05047|c72a1_catro : 564.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 563.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 327.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1126.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold80774_3316-7005' '(at5g36110 : 338.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q94iw5|c90d2_orysa : 232.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 209.0) no description available & (reliability: 676.0) & (original description: Putative CYP716B2, Description = Cytochrome P450 716B2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold86025_2095-5645' '(at4g39490 : 475.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 308.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 950.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.3scaffold108296_1-3114' '(o81974|c71d8_soybn : 496.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 466.0) no description available & (at3g26310 : 373.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 301.0) no description available & (reliability: 746.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold124_173733-180425' '(at3g19270 : 631.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 266.0) no description available & (q69f95|c85a_phavu : 252.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32307 : 218.0) no description available & (reliability: 1262.0) & (original description: Putative CYP707A5, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold203_3342-710306' '(at4g31940 : 459.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 426.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 393.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 918.0) & (original description: Putative CYP82, Description = Cytochrome P450 82A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold239_832882-875831' '(at5g24910 : 594.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 323.0) no description available & (q05047|c72a1_catro : 249.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 239.0) no description available & (reliability: 1188.0) & (original description: Putative CYP714A1, Description = Cytochrome P450 714A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold955_289108-304173' '(gnl|cdd|35378 : 443.0) no description available & (at2g45550 : 401.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 352.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 317.0) no description available & (reliability: 802.0) & (original description: Putative gfh2, Description = Putative ripening-related P-450 enzyme, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 354.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold2295_121689-125519' '(o81974|c71d8_soybn : 447.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 446.0) no description available & (at3g26300 : 369.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 299.0) no description available & (reliability: 738.0) & (original description: Putative CYP71D10, Description = Cytochrome P450 71D10, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold2872_25028-35077' '(o48921|c97b2_soybn : 894.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 838.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 306.0) no description available & (gnl|cdd|84486 : 250.0) no description available & (reliability: 1676.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3315_112031-118306' '(at1g12740 : 264.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 187.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 140.0) no description available & (gnl|cdd|84486 : 128.0) no description available & (reliability: 528.0) & (original description: Putative Csa1G044890, Description = Predicted protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3490_20830-26355' '(q6f4f5|c724b_orysa : 415.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 344.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 214.0) no description available & (gnl|cdd|84486 : 147.0) no description available & (reliability: 652.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3490_20854-26182' '(q6f4f5|c724b_orysa : 349.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at5g14400 : 315.0) member of CYP724A; "cytochrome P450, family 724, subfamily A, polypeptide 1" (CYP724A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 22938 Blast hits to 22894 proteins in 1383 species: Archae - 43; Bacteria - 3025; Metazoa - 8566; Fungi - 3762; Plants - 6637; Viruses - 3; Other Eukaryotes - 902 (source: NCBI BLink). & (gnl|cdd|35379 : 182.0) no description available & (gnl|cdd|32307 : 119.0) no description available & (reliability: 630.0) & (original description: Putative D11, Description = Cytochrome P450 724B1, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121091-125085' '(at2g42250 : 440.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|35378 : 423.0) no description available & (q42798|c93a1_soybn : 363.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 281.0) no description available & (reliability: 880.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121195-127551' '(at2g42250 : 406.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|35378 : 379.0) no description available & (q42798|c93a1_soybn : 314.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 264.0) no description available & (reliability: 812.0) & (original description: Putative CYP712A1, Description = Cytochrome P450 93A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121335-125040' '(gnl|cdd|35378 : 270.0) no description available & (at2g42250 : 228.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|84486 : 212.0) no description available & (q42799|c93a2_soybn : 202.0) Cytochrome P450 93A2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 456.0) & (original description: Putative BnaC01g43750D, Description = BnaC01g43750D protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold4422_81564-90729' '(p37116|ncpr_phaau : 536.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 508.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (gnl|cdd|36373 : 384.0) no description available & (gnl|cdd|30718 : 281.0) no description available & (reliability: 1016.0) & (original description: Putative CYR, Description = NADPH-cytochrome P450 reductase, PFAM = PF00667;PF00175)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold4992_151459-154076' '(o81974|c71d8_soybn : 249.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 226.0) no description available & (at3g26300 : 203.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 185.0) no description available & (reliability: 406.0) & (original description: Putative CYP4, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold5669_589-3581' '(gnl|cdd|35378 : 139.0) no description available & (at1g01280 : 129.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (q42798|c93a1_soybn : 123.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 81.9) no description available & (reliability: 258.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold7809_14130-18396' '(at5g36110 : 330.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (q94iw5|c90d2_orysa : 213.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 197.0) no description available & (reliability: 660.0) & (original description: Putative Sb08g017540, Description = Putative uncharacterized protein Sb08g017540, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'nbv0.5scaffold8166_18812-24618' '(at3g19270 : 673.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 280.0) no description available & (q69f95|c85a_phavu : 243.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 210.0) no description available & (reliability: 1346.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00000377ctg036_597-4275' '(gnl|cdd|35379 : 309.0) no description available & (at5g63450 : 286.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|84486 : 171.0) no description available & (o48921|c97b2_soybn : 81.6) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 572.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 508.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00000622ctg018_2112-5411' '(at1g12740 : 215.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 195.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 88.9) no description available & (reliability: 430.0) & (original description: Putative CYP87A2, Description = Cytochrome P450, putative, PFAM = )' T
'26.10' 'misc.cytochrome P450' 'niben044scf00001215ctg010_1337-8229' '(p37117|c71a4_solme : 446.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at3g48280 : 308.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 25" (CYP71A25); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 32582 Blast hits to 32347 proteins in 1656 species: Archae - 46; Bacteria - 3283; Metazoa - 11769; Fungi - 6829; Plants - 9594; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35378 : 294.0) no description available & (gnl|cdd|84486 : 230.0) no description available & (reliability: 616.0) & (original description: Putative CYP71A25, Description = Cytochrome P450 71A25, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00001425ctg017_507-4093' '(at2g27690 : 587.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 317.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (q43068|c82a1_pea : 102.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1174.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00002011ctg016_61-2988' '(gnl|cdd|35378 : 229.0) no description available & (at5g07990 : 179.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 172.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 114.0) no description available & (reliability: 324.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00004419ctg015_731-4278' '(at1g64940 : 582.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 6" (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink). & (gnl|cdd|35378 : 403.0) no description available & (p37123|c77a1_solme : 379.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 282.0) no description available & (reliability: 1164.0) & (original description: Putative CYP89A2, Description = Cytochrome P450 89A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00004699ctg009_1-2393' '(gnl|cdd|35378 : 193.0) no description available & (at3g61040 : 160.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (p37122|c76a2_solme : 111.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 104.0) no description available & (reliability: 320.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00004699ctg011_5321-8023' '(gnl|cdd|35378 : 134.0) no description available & (at3g61040 : 106.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00005299ctg018_1058-2981' '(at2g45570 : 273.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|35378 : 252.0) no description available & (q9sbq9|f3ph_pethy : 234.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 203.0) no description available & (reliability: 546.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00005299ctg020_1124-2876' '(gnl|cdd|35378 : 118.0) no description available & (at2g45560 : 117.0) cytochrome P450 monooxygenase; "cytochrome P450, family 76, subfamily C, polypeptide 1" (CYP76C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 9073 Blast hits to 9044 proteins in 509 species: Archae - 15; Bacteria - 32; Metazoa - 3543; Fungi - 403; Plants - 4946; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (o81970|c71a9_soybn : 85.9) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (reliability: 234.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00010902ctg014_11829-16391' '(at5g52400 : 233.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 139.0) no description available & (q05047|c72a1_catro : 114.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 113.0) no description available & (reliability: 466.0) & (original description: Putative cyp, Description = Cytochrome P450 family 72 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00011309ctg033_12992-17058' '(at3g48520 : 563.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 369.0) no description available & (gnl|cdd|84486 : 212.0) no description available & (q43068|c82a1_pea : 92.4) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1126.0) & (original description: Putative CYP450A, Description = Cytochrome P450 A, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00011570ctg011_39967-42778' '(at5g24910 : 215.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 140.0) no description available & (q05047|c72a1_catro : 123.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 99.2) no description available & (reliability: 430.0) & (original description: Putative CYP714C2, Description = Cytochrome P450 734A6, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00012339ctg003_1-3379' '(at5g10600 : 188.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|35378 : 183.0) no description available & (gnl|cdd|84486 : 132.0) no description available & (p37120|c75a2_solme : 113.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 376.0) & (original description: Putative CYP1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00013814ctg008_5098-15700' '(o48921|c97b2_soybn : 803.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 753.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 1506.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00015844ctg007_1-2714' '(at5g10600 : 236.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|35378 : 209.0) no description available & (p37119|c71a3_solme : 124.0) Cytochrome P450 71A3 (EC 1.14.-.-) (CYPLXXIA3) (P-450EG3) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 105.0) no description available & (reliability: 472.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00017049ctg005_2022-6068' '(gnl|cdd|35378 : 458.0) no description available & (at5g10600 : 446.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 280.0) no description available & (reliability: 892.0) & (original description: Putative CYP81E8, Description = Cytochrome P450 81E8, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00018310ctg006_2187-4954' '(gnl|cdd|35378 : 175.0) no description available & (at3g48300 : 117.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81973|c93a3_soybn : 112.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 97.3) no description available & (reliability: 234.0) & (original description: Putative CYP9, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00020290ctg012_296-14489' '(q05047|c72a1_catro : 255.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 248.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 179.0) no description available & (gnl|cdd|84486 : 143.0) no description available & (reliability: 496.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00021169ctg005_7918-12308' '(o81974|c71d8_soybn : 501.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 390.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (reliability: 780.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00021967ctg015_1-4501' '(q05047|c72a1_catro : 399.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 397.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (reliability: 794.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00023760ctg000_4940-9536' '(at5g52400 : 309.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 163.0) no description available & (q05047|c72a1_catro : 138.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 131.0) no description available & (reliability: 618.0) & (original description: Putative cyp, Description = Cytochrome P450 family 72 protein, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00025586ctg005_2738-7488' '(at4g31970 : 444.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 2" (CYP82C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 33251 Blast hits to 33030 proteins in 1722 species: Archae - 60; Bacteria - 4009; Metazoa - 11748; Fungi - 6717; Plants - 9506; Viruses - 3; Other Eukaryotes - 1208 (source: NCBI BLink). & (gnl|cdd|35378 : 428.0) no description available & (o49859|c82a4_soybn : 402.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|84486 : 268.0) no description available & (reliability: 888.0) & (original description: Putative CYP82E1, Description = Elicitor-inducible cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00026213ctg008_373-10949' '(at4g19230 : 750.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 222.0) no description available & (reliability: 1474.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 674.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00031840ctg006_1745-4857' '(at3g14650 : 224.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 11" (CYP72A11); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31600 Blast hits to 31456 proteins in 1608 species: Archae - 67; Bacteria - 4692; Metazoa - 11270; Fungi - 6107; Plants - 8058; Viruses - 3; Other Eukaryotes - 1403 (source: NCBI BLink). & (q05047|c72a1_catro : 208.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 112.0) no description available & (reliability: 448.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00032167ctg002_7801-11619' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26310 : 380.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (reliability: 760.0) & (original description: Putative imt-5, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00033295ctg000_5974-13599' '(q05001|ncpr_catro : 1009.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 951.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (gnl|cdd|36373 : 627.0) no description available & (gnl|cdd|30718 : 421.0) no description available & (reliability: 1902.0) & (original description: Putative cpr2, Description = NADPH--cytochrome P450 reductase, PFAM = PF00175;PF00258;PF00667)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00036341ctg000_53380-57683' '(at5g36110 : 258.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 159.0) no description available & (q94iw5|c90d2_orysa : 119.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 117.0) no description available & (reliability: 516.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00037627ctg001_1-2771' '(at5g36140 : 248.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 2" (CYP716A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 109.0) no description available & (q6f4f5|c724b_orysa : 95.1) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative CYP716A2, Description = Cytochrome P450, family 716, subfamily A, polypeptide 2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00038148ctg006_1-1765' '(at1g75130 : 175.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 160.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 144.0) no description available & (gnl|cdd|84486 : 111.0) no description available & (reliability: 350.0) & (original description: Putative BAS1, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00038435ctg001_5155-10654' '(at3g14690 : 595.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 543.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 237.0) no description available & (reliability: 1190.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00041503ctg002_25117-27790' '(at1g64930 : 171.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 7" (CYP89A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33349 Blast hits to 33201 proteins in 1685 species: Archae - 50; Bacteria - 3939; Metazoa - 11722; Fungi - 7059; Plants - 9217; Viruses - 3; Other Eukaryotes - 1359 (source: NCBI BLink). & (p37123|c77a1_solme : 122.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 106.0) no description available & (reliability: 342.0) & (original description: Putative BnaC03g33410D, Description = BnaC03g33410D protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00047661ctg002_1432-4399' '(gnl|cdd|35378 : 215.0) no description available & (at3g61040 : 196.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (p37122|c76a2_solme : 175.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 120.0) no description available & (reliability: 392.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00050838ctg006_420-6290' '(at3g14690 : 602.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 573.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 338.0) no description available & (gnl|cdd|84486 : 249.0) no description available & (reliability: 1204.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben044scf00052783ctg002_586-4968' '(at4g12300 : 459.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 430.0) no description available & (gnl|cdd|84486 : 294.0) no description available & (q42798|c93a1_soybn : 290.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 912.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101ctg14561_38-2760' '(at3g56630 : 412.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 2" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|35379 : 350.0) no description available & (gnl|cdd|84486 : 183.0) no description available & (q05047|c72a1_catro : 98.2) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 824.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 710.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00072_538378-542025' '(o81974|c71d8_soybn : 489.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 376.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 315.0) no description available & (reliability: 752.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00072_592796-596443' '(o81974|c71d8_soybn : 489.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 376.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 314.0) no description available & (reliability: 752.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00090_717370-722857' '(at3g19270 : 641.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 261.0) no description available & (q9axh9|kao1_horvu : 254.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|84486 : 208.0) no description available & (reliability: 1282.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00090_717544-721768' '(at3g19270 : 520.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 202.0) no description available & (q69f95|c85a_phavu : 196.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 163.0) no description available & (reliability: 1040.0) & (original description: Putative CYP707A1, Description = ABA 8'-hydroxylase CYP707A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00109_887915-891465' '(at3g01900 : 536.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 2" (CYP94B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 24612 Blast hits to 24535 proteins in 1394 species: Archae - 46; Bacteria - 2681; Metazoa - 9088; Fungi - 5092; Plants - 6664; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|35379 : 353.0) no description available & (gnl|cdd|84486 : 195.0) no description available & (q43078|c97b1_pea : 104.0) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 1072.0) & (original description: Putative BnaC06g16010D, Description = BnaC06g16010D protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00113_568768-573471' '(at4g31940 : 458.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 425.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 392.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 916.0) & (original description: Putative CYP82G1, Description = Cytochrome P450 82G1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00219_418736-425681' '(at4g31940 : 721.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 523.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 476.0) no description available & (gnl|cdd|84486 : 276.0) no description available & (reliability: 1442.0) & (original description: Putative CYP82, Description = Cytochrome P450 82A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00222_185056-187667' '(at3g25180 : 157.0) member of CYP82G; "cytochrome P450, family 82, subfamily G, polypeptide 1" (CYP82G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49858|c82a3_soybn : 145.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 136.0) no description available & (gnl|cdd|84486 : 94.2) no description available & (reliability: 314.0) & (original description: Putative CYP82E1, Description = CYP82M1v1, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00261_292776-299745' '(gnl|cdd|35378 : 443.0) no description available & (at2g45550 : 406.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 351.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 323.0) no description available & (reliability: 812.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00272_752650-757140' '(at1g69500 : 803.0) Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers. Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis.; "cytochrome P450, family 704, subfamily B, polypeptide 1" (CYP704B1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 24652 Blast hits to 24553 proteins in 1381 species: Archae - 44; Bacteria - 2338; Metazoa - 9085; Fungi - 5048; Plants - 7257; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|35379 : 372.0) no description available & (gnl|cdd|84486 : 194.0) no description available & (o48921|c97b2_soybn : 104.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1606.0) & (original description: Putative CYP704B1, Description = Cytochrome P450 704B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00338_101912-110366' '(at2g23180 : 211.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 143.0) no description available & (gnl|cdd|84486 : 98.8) no description available & (reliability: 422.0) & (original description: Putative In03, Description = Cytochrome P450, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00338_978422-994382' '(at1g73340 : 627.0) Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 264.0) no description available & (q94iw5|c90d2_orysa : 243.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 177.0) no description available & (reliability: 1254.0) & (original description: Putative CYP720B1, Description = Abietadienol/abietadienal oxidase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00481_397392-400921' '(at2g23180 : 499.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 333.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (o48921|c97b2_soybn : 103.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 998.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00560_487503-491181' '(gnl|cdd|35379 : 309.0) no description available & (at3g48520 : 296.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|84486 : 172.0) no description available & (o48921|c97b2_soybn : 81.6) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 592.0) & (original description: Putative glysoja_002553, Description = Cytochrome P450 94A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00560_597587-601607' '(at5g36140 : 116.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 2" (CYP716A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400022059, Description = Putative cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00592_769531-773566' '(o81974|c71d8_soybn : 532.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 472.0) no description available & (at3g26300 : 399.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 315.0) no description available & (reliability: 798.0) & (original description: Putative CYP71D8, Description = Cytochrome P450 71D8, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00595_816552-895417' '(at5g52400 : 635.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 309.0) no description available & (gnl|cdd|84486 : 253.0) no description available & (q05047|c72a1_catro : 227.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1270.0) & (original description: Putative cyp, Description = Putative cytochrome P-450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00625_165282-167792' '(at1g34540 : 130.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 1" (CYP94D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 2 (TAIR:AT3G56630.1); Has 28664 Blast hits to 28574 proteins in 1494 species: Archae - 44; Bacteria - 2718; Metazoa - 10657; Fungi - 6200; Plants - 7985; Viruses - 3; Other Eukaryotes - 1057 (source: NCBI BLink). & (gnl|cdd|35379 : 87.0) no description available & (reliability: 260.0) & (original description: Putative CYP450A, Description = Cytochrome P450 94A1, PFAM = )' T
'26.10' 'misc.cytochrome P450' 'niben101scf00699_3597-11963' '(at3g14690 : 564.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 562.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 1128.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00699_3603-10622' '(at3g14690 : 493.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 454.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 323.0) no description available & (gnl|cdd|84486 : 234.0) no description available & (reliability: 986.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00699_13027-19753' '(at3g14690 : 583.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 580.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 345.0) no description available & (gnl|cdd|84486 : 234.0) no description available & (reliability: 1166.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00741_132336-136546' '(at1g12740 : 745.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 647.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 298.0) no description available & (gnl|cdd|84486 : 188.0) no description available & (reliability: 1490.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 666.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00996_60123-82891' '(at3g14690 : 416.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 405.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 230.0) no description available & (gnl|cdd|84486 : 166.0) no description available & (reliability: 832.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf00996_60437-76740' '(q05047|c72a1_catro : 120.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14660 : 100.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 13" (CYP72A13); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31786 Blast hits to 31657 proteins in 1619 species: Archae - 67; Bacteria - 4951; Metazoa - 11303; Fungi - 6022; Plants - 7953; Viruses - 3; Other Eukaryotes - 1487 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01001_115179-119542' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 473.0) no description available & (at3g26310 : 366.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 303.0) no description available & (reliability: 732.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 614.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01133_1180037-1184814' '(o48927|c78a3_soybn : 632.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 629.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 370.0) no description available & (gnl|cdd|84486 : 252.0) no description available & (reliability: 1258.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01269_217938-221636' '(at5g36110 : 338.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 267.0) no description available & (q94iw5|c90d2_orysa : 232.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 204.0) no description available & (reliability: 676.0) & (original description: Putative CYP716B2, Description = Cytochrome P450 716B2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01276_336438-339763' '(gnl|cdd|35378 : 248.0) no description available & (gnl|cdd|84486 : 199.0) no description available & (at2g45550 : 186.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (q42798|c93a1_soybn : 181.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 372.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 724.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01438_805818-814973' '(q05001|ncpr_catro : 1041.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 962.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (gnl|cdd|36373 : 624.0) no description available & (gnl|cdd|30718 : 418.0) no description available & (reliability: 1924.0) & (original description: Putative cpr2, Description = NADPH--cytochrome P450 reductase, PFAM = PF00175;PF00258;PF00667)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01442_215841-219322' '(at2g27690 : 589.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 324.0) no description available & (gnl|cdd|84486 : 193.0) no description available & (o48921|c97b2_soybn : 103.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1178.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01472_317244-320767' '(at4g39490 : 575.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 358.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (q43068|c82a1_pea : 124.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative MAH1, Description = MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01472_420174-423694' '(at4g39490 : 578.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 355.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (o48921|c97b2_soybn : 135.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1156.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01538_580685-585243' '(q05047|c72a1_catro : 480.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 459.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 328.0) no description available & (gnl|cdd|84486 : 249.0) no description available & (reliability: 918.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01559_348532-358967' '(o48921|c97b2_soybn : 889.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 836.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 303.0) no description available & (gnl|cdd|84486 : 246.0) no description available & (reliability: 1672.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01569_478585-494438' '(at4g31940 : 469.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 462.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 436.0) no description available & (gnl|cdd|84486 : 286.0) no description available & (reliability: 938.0) & (original description: Putative CYP82C4, Description = Cytochrome P450 82C4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01664_564493-569250' '(at1g12740 : 522.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 509.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 288.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (reliability: 1044.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01716_82062-85666' '(at2g45970 : 884.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.; "cytochrome P450, family 86, subfamily A, polypeptide 8" (CYP86A8); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 27979 Blast hits to 27896 proteins in 1493 species: Archae - 44; Bacteria - 2538; Metazoa - 10315; Fungi - 6189; Plants - 7925; Viruses - 3; Other Eukaryotes - 965 (source: NCBI BLink). & (gnl|cdd|35379 : 409.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (q9sbq9|f3ph_pethy : 113.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 1768.0) & (original description: Putative CYP86A22, Description = Cytochrome P450 86A22, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01732_99312-103516' '(gnl|cdd|35378 : 441.0) no description available & (at4g12320 : 419.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 6" (CYP706A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 4 (TAIR:AT4G12300.1); Has 33870 Blast hits to 33549 proteins in 1704 species: Archae - 58; Bacteria - 3712; Metazoa - 11941; Fungi - 7375; Plants - 9569; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (q42798|c93a1_soybn : 266.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 838.0) & (original description: Putative CYP1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01732_207515-211624' '(gnl|cdd|35378 : 445.0) no description available & (at4g12300 : 443.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (o81973|c93a3_soybn : 296.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 874.0) & (original description: Putative f3'5'h, Description = Flavonoid 3',5'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01732_211221-217167' '(at4g12300 : 460.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 441.0) no description available & (q42798|c93a1_soybn : 306.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 298.0) no description available & (reliability: 916.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01732_220591-224985' '(at4g12300 : 607.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (o81973|c93a3_soybn : 332.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1186.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01813_145590-149660' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 326.0) no description available & (reliability: 694.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01813_145620-149681' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 325.0) no description available & (reliability: 694.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01859_412992-418709' '(at1g75130 : 530.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 350.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 318.0) no description available & (gnl|cdd|84486 : 231.0) no description available & (reliability: 1060.0) & (original description: Putative CYP734A1, Description = Cytochrome P450 734A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf01991_652749-657822' '(at5g38450 : 717.0) member of CYP709A; "cytochrome P450, family 735, subfamily A, polypeptide 1" (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 354.0) no description available & (q05047|c72a1_catro : 329.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 237.0) no description available & (reliability: 1434.0) & (original description: Putative CYP735A1, Description = Cytokinin hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02195_477937-483034' '(at2g45570 : 441.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|35378 : 432.0) no description available & (p37122|c76a2_solme : 340.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 296.0) no description available & (reliability: 882.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02207_1111318-1116008' '(at4g15440 : 436.0) Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.; hydroperoxide lyase 1 (HPL1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: fatty acid metabolic process, response to wounding; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: allene oxide synthase (TAIR:AT5G42650.1); Has 6712 Blast hits to 6702 proteins in 615 species: Archae - 25; Bacteria - 392; Metazoa - 3265; Fungi - 548; Plants - 2246; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (q6z6k9|c74a4_orysa : 320.0) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) & (gnl|cdd|35379 : 100.0) no description available & (gnl|cdd|84486 : 98.0) no description available & (reliability: 872.0) & (original description: Putative hpl, Description = Hydroperoxide lyase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02232_16644-20161' '(at2g34500 : 641.0) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2).; cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|35379 : 229.0) no description available & (gnl|cdd|84486 : 160.0) no description available & (q43246|c88a1_maize : 92.4) Cytochrome P450 88A1 (EC 1.14.-.-) (Dwarf3 protein) - Zea mays (Maize) & (reliability: 1282.0) & (original description: Putative CYP710A11, Description = Cytochrome P450 710A11, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02250_324783-328918' '(at5g58860 : 825.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.; "cytochrome P450, family 86, subfamily A, polypeptide 1" (CYP86A1); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process, suberin biosynthetic process; LOCATED IN: vacuole; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 2 (TAIR:AT4G00360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 370.0) no description available & (gnl|cdd|84486 : 210.0) no description available & (q43255|c71c2_maize : 105.0) Cytochrome P450 71C2 (EC 1.14.-.-) (Benzoxazineless 3) - Zea mays (Maize) & (reliability: 1650.0) & (original description: Putative CYP86A1, Description = Cytochrome P450 86A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02316_459842-467286' '(at5g24910 : 471.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 306.0) no description available & (q05047|c72a1_catro : 256.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 239.0) no description available & (reliability: 942.0) & (original description: Putative CYP714C2, Description = Cytochrome P450 714C2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02322_344527-356847' '(o49859|c82a4_soybn : 103.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|35378 : 101.0) no description available & (at4g31950 : 90.1) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 3" (CYP82C3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 32928 Blast hits to 32766 proteins in 1729 species: Archae - 58; Bacteria - 3784; Metazoa - 11595; Fungi - 6894; Plants - 9333; Viruses - 3; Other Eukaryotes - 1261 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative CYP82A3, Description = Cytochrome P450 82A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02322_352845-357462' '(o49859|c82a4_soybn : 491.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (at4g31940 : 456.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35378 : 453.0) no description available & (gnl|cdd|84486 : 301.0) no description available & (reliability: 912.0) & (original description: Putative CYP82A4, Description = Cytochrome P450 82A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02408_150490-156314' '(at3g19270 : 660.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 281.0) no description available & (q69f95|c85a_phavu : 233.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 213.0) no description available & (reliability: 1320.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02427_28989-32949' '(at4g37370 : 469.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 304.0) no description available & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 938.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02576_131110-135162' '(at4g00360 : 814.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.; "cytochrome P450, family 86, subfamily A, polypeptide 2" (CYP86A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 402.0) no description available & (gnl|cdd|84486 : 198.0) no description available & (q42798|c93a1_soybn : 105.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1628.0) & (original description: Putative CYP86A22, Description = Cytochrome P450 86A22, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02625_30454-108755' '(at3g48520 : 570.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 379.0) no description available & (gnl|cdd|84486 : 198.0) no description available & (o48921|c97b2_soybn : 97.1) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1140.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf02814_292054-296391' '(p37122|c76a2_solme : 682.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (at3g52970 : 434.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|35378 : 426.0) no description available & (gnl|cdd|84486 : 332.0) no description available & (reliability: 868.0) & (original description: Putative gfh2, Description = Cytochrome P450 76A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03193_18703-23405' '(o81974|c71d8_soybn : 503.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26300 : 363.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 296.0) no description available & (reliability: 726.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03249_135023-141094' '(at5g36110 : 365.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 233.0) no description available & (q94iw5|c90d2_orysa : 171.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 169.0) no description available & (reliability: 730.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03262_145967-150912' '(p37121|c76a1_solme : 712.0) Cytochrome P450 76A1 (EC 1.14.-.-) (CYPLXXVIA1) (P-450EG8) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 432.0) no description available & (at3g52970 : 394.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|84486 : 348.0) no description available & (reliability: 788.0) & (original description: Putative cpr, Description = Cytochrome P450 76A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03320_527044-531744' '(q42798|c93a1_soybn : 582.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 510.0) no description available & (at5g06900 : 451.0) member of CYP93D; "cytochrome P450, family 93, subfamily D, polypeptide 1" (CYP93D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 1 (TAIR:AT2G42250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84486 : 319.0) no description available & (reliability: 902.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03396_289943-295424' '(at5g36110 : 405.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 285.0) no description available & (q7xu38|c87a3_orysa : 202.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|84486 : 190.0) no description available & (reliability: 810.0) & (original description: Putative CYP725A2, Description = Taxane 13-alpha-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03403_153766-163180' '(p37116|ncpr_phaau : 389.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 323.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (gnl|cdd|36373 : 185.0) no description available & (gnl|cdd|30718 : 147.0) no description available & (reliability: 646.0) & (original description: Putative CPR, Description = NADPH-cytochrome P450 reductase, PFAM = PF00258)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03435_192875-202266' '(at1g12740 : 408.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 400.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 142.0) no description available & (reliability: 816.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03435_193638-202152' '(at1g12740 : 270.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 186.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 142.0) no description available & (gnl|cdd|84486 : 126.0) no description available & (reliability: 540.0) & (original description: Putative Csa1G044890, Description = Cytochrome P450 87A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03595_843915-850629' '(at5g23190 : 778.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; "cytochrome P450, family 86, subfamily B, polypeptide 1" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 394.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (o48921|c97b2_soybn : 125.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1556.0) & (original description: Putative CYP86B1, Description = Cytochrome P450 86B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03647_87273-91470' '(at3g56630 : 609.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 2" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|35379 : 367.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (o48921|c97b2_soybn : 117.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1218.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 314.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 990.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03674_199197-202699' '(at2g27690 : 593.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 318.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (q43068|c82a1_pea : 98.6) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1186.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03758_177507-188516' '(at1g19630 : 529.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (gnl|cdd|84486 : 216.0) no description available & (q94iw5|c90d2_orysa : 200.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (reliability: 1058.0) & (original description: Putative CYP722A1, Description = Cytochrome P450, family 722, subfamily A, polypeptide 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf03761_43413-48596' '(at1g01280 : 784.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (gnl|cdd|35378 : 464.0) no description available & (q9sbq9|f3ph_pethy : 357.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 301.0) no description available & (reliability: 1568.0) & (original description: Putative CYP703A2, Description = Cytochrome P450 703A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 700.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04134_38862-42403' '(at5g63450 : 293.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 293.0) no description available & (gnl|cdd|84486 : 171.0) no description available & (o49858|c82a3_soybn : 92.8) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (reliability: 586.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04138_198521-214654' '(at5g24910 : 633.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 332.0) no description available & (q05047|c72a1_catro : 271.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 242.0) no description available & (reliability: 1266.0) & (original description: Putative CYP714A1, Description = Cytochrome P450 714A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04260_221180-226435' '(p37122|c76a2_solme : 541.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 410.0) no description available & (at3g52970 : 395.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|84486 : 328.0) no description available & (reliability: 790.0) & (original description: Putative CS, Description = Corytuberine synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04362_791013-794670' '(o81974|c71d8_soybn : 499.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26300 : 385.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 308.0) no description available & (reliability: 770.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04500_350923-424684' '(at4g39490 : 509.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 323.0) no description available & (gnl|cdd|84486 : 161.0) no description available & (q43068|c82a1_pea : 119.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1018.0) & (original description: Putative In03, Description = Cytochrome P450 family protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04500_396469-424693' '(at4g39490 : 506.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1012.0) & (original description: Putative In03, Description = Cytochrome P450 family protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04500_479441-482955' '(at4g39490 : 584.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 352.0) no description available & (gnl|cdd|84486 : 182.0) no description available & (o48921|c97b2_soybn : 135.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1168.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04702_599890-603580' '(o81974|c71d8_soybn : 467.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 457.0) no description available & (at3g26330 : 367.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 37" (CYP71B37); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 36 (TAIR:AT3G26320.1); Has 32471 Blast hits to 32207 proteins in 1677 species: Archae - 50; Bacteria - 3065; Metazoa - 12022; Fungi - 6765; Plants - 9535; Viruses - 3; Other Eukaryotes - 1031 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (reliability: 734.0) & (original description: Putative cyp71, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04887_113738-118444' '(gnl|cdd|35378 : 443.0) no description available & (at2g45570 : 419.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p37122|c76a2_solme : 328.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 838.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04930_38889-42421' '(at5g63450 : 402.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 345.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (q05047|c72a1_catro : 95.1) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 804.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04945_315191-322883' '(at3g14690 : 571.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 557.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1142.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf04995_1183312-1187744' '(gnl|cdd|35378 : 433.0) no description available & (at4g37320 : 423.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|84486 : 281.0) no description available & (q43068|c82a1_pea : 280.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 846.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05034_98139-101793' '(gnl|cdd|35378 : 394.0) no description available & (at2g45570 : 325.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|84486 : 282.0) no description available & (p37122|c76a2_solme : 269.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 650.0) & (original description: Putative CYP80F1, Description = Littorine mutase/monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05111_393144-397662' '(at5g09970 : 692.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 7" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48420|c78a1_maize : 625.0) Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII) - Zea mays (Maize) & (gnl|cdd|35378 : 408.0) no description available & (gnl|cdd|84486 : 246.0) no description available & (reliability: 1384.0) & (original description: Putative CYP78A7, Description = Cytochrome P450 78A7, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05191_36517-46617' '(o48921|c97b2_soybn : 807.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 756.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 228.0) no description available & (reliability: 1512.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05492_304448-307208' '(gnl|cdd|35378 : 155.0) no description available & (at3g26330 : 107.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 37" (CYP71B37); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 36 (TAIR:AT3G26320.1); Has 32471 Blast hits to 32207 proteins in 1677 species: Archae - 50; Bacteria - 3065; Metazoa - 12022; Fungi - 6765; Plants - 9535; Viruses - 3; Other Eukaryotes - 1031 (source: NCBI BLink). & (o22307|c71db_lotja : 93.6) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus & (gnl|cdd|84486 : 84.2) no description available & (reliability: 214.0) & (original description: Putative CYP71AU50, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05615_176608-182591' '(at3g14690 : 559.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 516.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 319.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1118.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05615_284399-293702' '(at3g14690 : 634.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 594.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 1268.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05621_514506-521005' '(at1g13710 : 488.0) Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.; "cytochrome P450, family 78, subfamily A, polypeptide 5" (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink). & (o48927|c78a3_soybn : 454.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 372.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 976.0) & (original description: Putative CYP78A5, Description = Cytochrome P450 78A5, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05665_3721-7305' '(p37123|c77a1_solme : 763.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 661.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 412.0) no description available & (gnl|cdd|84486 : 347.0) no description available & (reliability: 1322.0) & (original description: Putative CYP77A3, Description = Cytochrome P450 77A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05698_15509-18972' '(at2g27690 : 575.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 324.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (o48921|c97b2_soybn : 106.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1150.0) & (original description: Putative CYP94C9, Description = Cytochrome P450 family 94 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05702_232396-236036' '(at2g42850 : 541.0) member of CYP718; "cytochrome P450, family 718" (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35379 : 276.0) no description available & (q6f4f5|c724b_orysa : 196.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|84486 : 195.0) no description available & (reliability: 1082.0) & (original description: Putative CYP718, Description = Taxadiene 5-alpha hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05824_982162-988531' '(gnl|cdd|35378 : 360.0) no description available & (at2g45570 : 325.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|84486 : 284.0) no description available & (p37122|c76a2_solme : 264.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 650.0) & (original description: Putative CYP80B3, Description = (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf05931_63471-69874' '(at1g19630 : 407.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 238.0) no description available & (gnl|cdd|84486 : 195.0) no description available & (q8gsq1|c85a1_orysa : 187.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative glysoja_000185, Description = Taxane 13-alpha-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf06310_70044-73640' '(p37123|c77a1_solme : 763.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 628.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 408.0) no description available & (gnl|cdd|84486 : 343.0) no description available & (reliability: 1256.0) & (original description: Putative CYP77A1, Description = Cytochrome P450 77A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf06405_73422-81221' '(at3g19270 : 599.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q69f95|c85a_phavu : 224.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32307 : 209.0) no description available & (reliability: 1198.0) & (original description: Putative CYP707A7, Description = Abscisic acid 8'-hydroxylase 3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf06436_46702-51437' '(o48927|c78a3_soybn : 702.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 665.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 376.0) no description available & (gnl|cdd|84486 : 247.0) no description available & (reliability: 1330.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf06751_117575-126328' '(q05047|c72a1_catro : 579.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 576.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 328.0) no description available & (gnl|cdd|84486 : 239.0) no description available & (reliability: 1152.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf06825_189062-201816' '(at1g73340 : 639.0) Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 270.0) no description available & (q94iw5|c90d2_orysa : 259.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 187.0) no description available & (reliability: 1278.0) & (original description: Putative CYP720B2, Description = Cytochrome P450 720B2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07231_441393-447638' '(gnl|cdd|35378 : 441.0) no description available & (at5g10600 : 429.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|84486 : 289.0) no description available & (p48418|c75a1_pethy : 282.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 858.0) & (original description: Putative CYP6, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07234_70945-76675' '(q6f4f5|c724b_orysa : 635.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 410.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (reliability: 794.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07242_113722-117574' '(gnl|cdd|35378 : 436.0) no description available & (at5g10600 : 423.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (q43068|c82a1_pea : 295.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 291.0) no description available & (reliability: 846.0) & (original description: Putative p450, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07242_744099-749608' '(at4g37370 : 483.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 461.0) no description available & (q43068|c82a1_pea : 310.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 278.0) no description available & (reliability: 966.0) & (original description: Putative CYP81F3, Description = Cytochrome P450 81F3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07288_919811-924250' '(at4g19230 : 754.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 283.0) no description available & (q8gsq1|c85a1_orysa : 258.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 219.0) no description available & (reliability: 1480.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07374_91568-97219' '(at3g52970 : 639.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 430.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 429.0) no description available & (gnl|cdd|84486 : 317.0) no description available & (reliability: 1278.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07391_150043-153528' '(at1g12740 : 740.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 652.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 300.0) no description available & (gnl|cdd|84486 : 191.0) no description available & (reliability: 1480.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07508_477926-483587' '(gnl|cdd|35378 : 439.0) no description available & (at5g10600 : 423.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (p48418|c75a1_pethy : 283.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 283.0) no description available & (reliability: 846.0) & (original description: Putative TCP3, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07516_456743-461221' '(at2g45510 : 644.0) member of CYP704A; "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 343.0) no description available & (gnl|cdd|84486 : 218.0) no description available & (o48921|c97b2_soybn : 123.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1288.0) & (original description: Putative CYP704C1, Description = Cytochrome P450 704C1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07673_63112-95764' '(gnl|cdd|35378 : 194.0) no description available & (at2g42250 : 169.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|84486 : 146.0) no description available & (o81973|c93a3_soybn : 132.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 338.0) & (original description: Putative BnaA03g25830D, Description = BnaA03g25830D protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07673_93141-140455' '(gnl|cdd|35378 : 193.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (at2g42250 : 171.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (q42798|c93a1_soybn : 135.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 342.0) & (original description: Putative cpr, Description = Cytochrome P450 93A1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07695_163251-169935' '(at3g14690 : 600.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 588.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1200.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07790_231048-234855' '(at1g11600 : 711.0) member of CYP77B; "cytochrome P450, family 77, subfamily B, polypeptide 1" (CYP77B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 32592 Blast hits to 32103 proteins in 1633 species: Archae - 48; Bacteria - 3170; Metazoa - 12143; Fungi - 6852; Plants - 9226; Viruses - 3; Other Eukaryotes - 1150 (source: NCBI BLink). & (o48928|c77a3_soybn : 432.0) Cytochrome P450 77A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 370.0) no description available & (gnl|cdd|84486 : 285.0) no description available & (reliability: 1422.0) & (original description: Putative cytochrome P450 CYP77B21, Description = Cytochrome P450 CYP77B21, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07817_169232-175264' '(at2g45550 : 434.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 386.0) no description available & (p37122|c76a2_solme : 337.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 260.0) no description available & (reliability: 868.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067;PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07817_246656-252399' '(at2g45550 : 479.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 443.0) no description available & (p37122|c76a2_solme : 377.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 304.0) no description available & (reliability: 958.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf07939_51702-57227' '(at5g36110 : 594.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q94iw5|c90d2_orysa : 216.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 200.0) no description available & (reliability: 1188.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf08195_633820-637562' '(at5g36110 : 431.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 256.0) no description available & (gnl|cdd|32307 : 198.0) no description available & (q8gsq1|c85a1_orysa : 191.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf08430_115890-120505' '(at4g31970 : 455.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 2" (CYP82C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 33251 Blast hits to 33030 proteins in 1722 species: Archae - 60; Bacteria - 4009; Metazoa - 11748; Fungi - 6717; Plants - 9506; Viruses - 3; Other Eukaryotes - 1208 (source: NCBI BLink). & (gnl|cdd|35378 : 424.0) no description available & (o49859|c82a4_soybn : 413.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|84486 : 264.0) no description available & (reliability: 910.0) & (original description: Putative CYP82C3, Description = Cytochrome P450 82C3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf08887_21909-27230' '(at3g14630 : 472.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 9" (CYP72A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 33639 Blast hits to 33491 proteins in 1708 species: Archae - 69; Bacteria - 5909; Metazoa - 11396; Fungi - 6462; Plants - 8229; Viruses - 3; Other Eukaryotes - 1571 (source: NCBI BLink). & (q05047|c72a1_catro : 449.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 312.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 944.0) & (original description: Putative cyp03, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09025_1406-4905' '(at3g48520 : 580.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 395.0) no description available & (gnl|cdd|84486 : 219.0) no description available & (q05047|c72a1_catro : 101.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1160.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09172_314487-321414' '(at1g75130 : 504.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 358.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 227.0) no description available & (reliability: 1008.0) & (original description: Putative Sb09g019950, Description = Putative uncharacterized protein Sb09g019950, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09223_323118-335433' '(q42798|c93a1_soybn : 585.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 487.0) no description available & (at5g06900 : 477.0) member of CYP93D; "cytochrome P450, family 93, subfamily D, polypeptide 1" (CYP93D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 1 (TAIR:AT2G42250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (reliability: 954.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09565_173572-177098' '(at2g23180 : 474.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 341.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 105.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 948.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09620_502559-558951' '(o48927|c78a3_soybn : 672.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 668.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 391.0) no description available & (gnl|cdd|84486 : 242.0) no description available & (reliability: 1336.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09649_545642-549970' '(at5g09970 : 693.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 7" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1v5|c78ab_orysa : 599.0) Cytochrome P450 78A11 (EC 1.14.-.-) (Protein PLASTOCHRON1) - Oryza sativa (Rice) & (gnl|cdd|35378 : 402.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 1386.0) & (original description: Putative CYP78A7, Description = Cytochrome P450 78A7, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09685_12312-18510' '(q6f4f5|c724b_orysa : 473.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 402.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 244.0) no description available & (gnl|cdd|84486 : 158.0) no description available & (reliability: 776.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09685_20992-26720' '(q6f4f5|c724b_orysa : 439.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 360.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 156.0) no description available & (reliability: 706.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09685_21865-26544' '(q6f4f5|c724b_orysa : 316.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 278.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 176.0) no description available & (gnl|cdd|84486 : 129.0) no description available & (reliability: 542.0) & (original description: Putative D11, Description = Cytochrome P450 90B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09994_24972-28944' '(gnl|cdd|35378 : 413.0) no description available & (at2g45550 : 381.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p48418|c75a1_pethy : 311.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 281.0) no description available & (reliability: 762.0) & (original description: Putative CS, Description = Corytuberine synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf09996_12860-24725' '(at5g36110 : 425.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 262.0) no description available & (q6f4f5|c724b_orysa : 198.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|84486 : 185.0) no description available & (reliability: 850.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10032_16679-20308' '(o81974|c71d8_soybn : 532.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 464.0) no description available & (at3g26320 : 404.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 36" (CYP71B36); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 37 (TAIR:AT3G26330.1); Has 32048 Blast hits to 31771 proteins in 1644 species: Archae - 44; Bacteria - 2893; Metazoa - 12018; Fungi - 6634; Plants - 9453; Viruses - 3; Other Eukaryotes - 1003 (source: NCBI BLink). & (gnl|cdd|84486 : 305.0) no description available & (reliability: 808.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10032_183159-187382' '(gnl|cdd|35378 : 474.0) no description available & (at2g45550 : 445.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 387.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 890.0) & (original description: Putative gfh2, Description = Putative ripening-related P-450 enzyme, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10101_46912-53075' '(at3g14690 : 597.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 591.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 346.0) no description available & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1194.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 346.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10415_1664-22200' '(at4g19230 : 741.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1458.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10708_6090-10136' '(gnl|cdd|35378 : 453.0) no description available & (at4g37330 : 439.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 4" (CYP81D4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 5 (TAIR:AT4G37320.1); Has 36638 Blast hits to 36468 proteins in 1879 species: Archae - 61; Bacteria - 6348; Metazoa - 11702; Fungi - 7393; Plants - 9479; Viruses - 6; Other Eukaryotes - 1649 (source: NCBI BLink). & (q43068|c82a1_pea : 300.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 276.0) no description available & (reliability: 878.0) & (original description: Putative CYP81E7, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 712.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf11215_113832-120918' '(at3g14690 : 653.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 623.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 349.0) no description available & (gnl|cdd|84486 : 245.0) no description available & (reliability: 1306.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf11215_152843-157912' '(at3g14690 : 595.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 561.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 330.0) no description available & (gnl|cdd|84486 : 215.0) no description available & (reliability: 1190.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf11401_44642-57499' '(at1g74110 : 665.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 10" (CYP78A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 5 (TAIR:AT1G13710.1); Has 31373 Blast hits to 31249 proteins in 1617 species: Archae - 44; Bacteria - 2867; Metazoa - 11374; Fungi - 6846; Plants - 9229; Viruses - 3; Other Eukaryotes - 1010 (source: NCBI BLink). & (o48927|c78a3_soybn : 487.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 434.0) no description available & (gnl|cdd|84486 : 258.0) no description available & (reliability: 1330.0) & (original description: Putative CYP78A5, Description = Cytochrome P450 78A5, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf12205_293246-297176' '(at5g36110 : 436.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 255.0) no description available & (q94iw5|c90d2_orysa : 196.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 187.0) no description available & (reliability: 872.0) & (original description: Putative cytochrome P450 CYP725B1, Description = Cytochrome P450 CYP725B1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf13221_34103-38399' '(gnl|cdd|35378 : 505.0) no description available & (at4g31500 : 495.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 441.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 327.0) no description available & (reliability: 990.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf13833_336568-346755' '(o81970|c71a9_soybn : 539.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|35378 : 500.0) no description available & (at3g26310 : 414.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 299.0) no description available & (reliability: 828.0) & (original description: Putative CYP71A9, Description = Cytochrome P450 71A9, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf14831_18874-22421' '(at1g64940 : 553.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 6" (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink). & (gnl|cdd|35378 : 387.0) no description available & (p37123|c77a1_solme : 356.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 271.0) no description available & (reliability: 1106.0) & (original description: Putative CYP89A9, Description = Cytochrome P450 89A9, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf17594_56137-60331' '(gnl|cdd|35378 : 504.0) no description available & (at4g31500 : 472.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 419.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 321.0) no description available & (reliability: 944.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf18418_244994-250012' '(at5g36110 : 318.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 220.0) no description available & (q94iw5|c90d2_orysa : 189.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 164.0) no description available & (reliability: 636.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf19458_22450-26054' '(at2g27690 : 568.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 310.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1136.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf22469_1-3670' '(o22307|c71db_lotja : 326.0) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus & (gnl|cdd|35378 : 294.0) no description available & (at3g48270 : 236.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 26" (CYP71A26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1); Has 32796 Blast hits to 32545 proteins in 1644 species: Archae - 46; Bacteria - 3223; Metazoa - 11825; Fungi - 7001; Plants - 9620; Viruses - 3; Other Eukaryotes - 1078 (source: NCBI BLink). & (gnl|cdd|84486 : 156.0) no description available & (reliability: 472.0) & (original description: Putative COS, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf25279_445-6215' '(at5g38450 : 724.0) member of CYP709A; "cytochrome P450, family 735, subfamily A, polypeptide 1" (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 347.0) no description available & (q05047|c72a1_catro : 331.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1448.0) & (original description: Putative CYP735A1, Description = Cytokinin hydroxylase, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf27001_74145-78365' '(gnl|cdd|35378 : 401.0) no description available & (at2g45570 : 386.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p37122|c76a2_solme : 334.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 772.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf28705_1-3161' '(p37117|c71a4_solme : 710.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 502.0) no description available & (at3g48290 : 501.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 24" (CYP71A24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1). & (gnl|cdd|84486 : 317.0) no description available & (reliability: 1002.0) & (original description: Putative CYP71A2, Description = Cytochrome P450 71A2, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf32536_66090-69649' '(at5g24910 : 169.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q05047|c72a1_catro : 89.7) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 86.2) no description available & (reliability: 338.0) & (original description: Putative CYP714G3, Description = CYP450-17, PFAM = PF00067)' T
'26.10' 'misc.cytochrome P450' 'niben101scf32649_29128-34804' '(p37124|c77a2_solme : 819.0) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXVIIA2) (P-450EG5) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 711.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 400.0) no description available & (gnl|cdd|84486 : 361.0) no description available & (reliability: 1422.0) & (original description: Putative CYP77A2, Description = Cytochrome P450 77A2, PFAM = PF00067)' T
'26.11' 'misc.alcohol dehydrogenases' 'nbv0.3scaffold3657_15751-23936' '(gnl|cdd|35245 : 317.0) no description available & (gnl|cdd|31262 : 266.0) no description available & (at1g32780 : 224.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 32235 Blast hits to 32213 proteins in 3118 species: Archae - 738; Bacteria - 20422; Metazoa - 1293; Fungi - 2369; Plants - 4116; Viruses - 3; Other Eukaryotes - 3294 (source: NCBI BLink). & (p48977|adh_maldo : 223.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 448.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'nbv0.5scaffold674_398972-406791' '(gnl|cdd|35245 : 385.0) no description available & (gnl|cdd|31262 : 320.0) no description available & (p48977|adh_maldo : 275.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 271.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T
'26.11' 'misc.alcohol dehydrogenases' 'nbv0.5scaffold6694_10119-15445' '(at5g42250 : 502.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 444.0) no description available & (gnl|cdd|31262 : 344.0) no description available & (p25141|adh1_pethy : 337.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (reliability: 1004.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben044scf00004457ctg001_2704-5757' '(at3g42960 : 250.0) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.; TAPETUM 1 (ATA1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115619 Blast hits to 115418 proteins in 3535 species: Archae - 928; Bacteria - 77402; Metazoa - 4592; Fungi - 5922; Plants - 2472; Viruses - 7; Other Eukaryotes - 24296 (source: NCBI BLink). & (gnl|cdd|35944 : 202.0) no description available & (gnl|cdd|84318 : 173.0) no description available & (p50160|ts2_maize : 143.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative TA1, Description = Short-chain dehydrogenase reductase ATA1, PFAM = PF13561)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben044scf00046740ctg005_5591-11406' '(at5g42250 : 573.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 518.0) no description available & (p25141|adh1_pethy : 404.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 393.0) no description available & (reliability: 1146.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf00288_1875258-1879018' '(at3g42960 : 236.0) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.; TAPETUM 1 (ATA1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115619 Blast hits to 115418 proteins in 3535 species: Archae - 928; Bacteria - 77402; Metazoa - 4592; Fungi - 5922; Plants - 2472; Viruses - 7; Other Eukaryotes - 24296 (source: NCBI BLink). & (gnl|cdd|35944 : 203.0) no description available & (gnl|cdd|84318 : 175.0) no description available & (p50160|ts2_maize : 145.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 472.0) & (original description: Putative TA1, Description = Short-chain dehydrogenase reductase ATA1, PFAM = PF13561)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf01435_371203-377238' '(gnl|cdd|35245 : 544.0) no description available & (at1g64710 : 512.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 31850 Blast hits to 31834 proteins in 3141 species: Archae - 706; Bacteria - 20375; Metazoa - 1244; Fungi - 2231; Plants - 4096; Viruses - 3; Other Eukaryotes - 3195 (source: NCBI BLink). & (gnl|cdd|31262 : 392.0) no description available & (p25141|adh1_pethy : 359.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (reliability: 1024.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf01658_127644-135677' '(gnl|cdd|35245 : 398.0) no description available & (gnl|cdd|31262 : 329.0) no description available & (p48977|adh_maldo : 286.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 280.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf03141_843898-849713' '(at5g42250 : 503.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 446.0) no description available & (p25141|adh1_pethy : 342.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 342.0) no description available & (reliability: 1006.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf03263_882456-888963' '(at5g43940 : 697.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 691.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|35245 : 633.0) no description available & (gnl|cdd|31262 : 507.0) no description available & (reliability: 1394.0) & (original description: Putative ADH2, Description = Alcohol dehydrogenase class-3, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf04078_135814-142523' '(at5g24760 : 543.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 31909 Blast hits to 31894 proteins in 3124 species: Archae - 749; Bacteria - 20391; Metazoa - 1181; Fungi - 2292; Plants - 4048; Viruses - 0; Other Eukaryotes - 3248 (source: NCBI BLink). & (gnl|cdd|35245 : 488.0) no description available & (p25141|adh1_pethy : 387.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 385.0) no description available & (reliability: 1086.0) & (original description: Putative adh1, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf05385_378292-384792' '(at5g42250 : 570.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 525.0) no description available & (p93436|adhx_orysa : 392.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|31262 : 378.0) no description available & (reliability: 1140.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF00107;PF08240)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf05848_372139-378066' '(at1g65560 : 483.0) Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 16645 Blast hits to 16624 proteins in 1782 species: Archae - 118; Bacteria - 9540; Metazoa - 863; Fungi - 1044; Plants - 588; Viruses - 0; Other Eukaryotes - 4492 (source: NCBI BLink). & (gnl|cdd|36410 : 465.0) no description available & (gnl|cdd|32313 : 361.0) no description available & (reliability: 966.0) & (original description: Putative Sb03g042360, Description = Putative uncharacterized protein Sb03g042360, PFAM = PF16884;PF00107)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf07673_94905-107700' '(gnl|cdd|36410 : 289.0) no description available & (gnl|cdd|32313 : 282.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf08039_280627-292430' '(gnl|cdd|36410 : 282.0) no description available & (gnl|cdd|32313 : 280.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf11319_89467-94802' '(at5g42250 : 572.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 516.0) no description available & (p25141|adh1_pethy : 400.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 394.0) no description available & (reliability: 1144.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF00107;PF08240)' T
'26.11' 'misc.alcohol dehydrogenases' 'niben101scf19980_310-5244' '(at5g43940 : 421.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 415.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|35245 : 399.0) no description available & (gnl|cdd|31262 : 324.0) no description available & (reliability: 842.0) & (original description: Putative frmA, Description = Glutathione-dependent formaldehyde dehydrogenase, PFAM = PF08240)' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 304.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.5scaffold106_703415-719646' '(gnl|cdd|36715 : 380.0) no description available & (at5g19440 : 369.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51104|dfra_diaca : 211.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 116.0) no description available & (reliability: 738.0) & (original description: Putative ADH, Description = Putative alcohol dehydrogenase, PFAM = PF01370)' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.5scaffold1689_31201-42946' '(at5g19440 : 488.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 409.0) no description available & (p51104|dfra_diaca : 236.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 113.0) no description available & (reliability: 976.0) & (original description: Putative cad2, Description = Cinnamoyl alcohol dehydrogenase, PFAM = PF01370)' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf00327_17454-21041' '(at1g51410 : 142.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19440.1); Has 8402 Blast hits to 8385 proteins in 1446 species: Archae - 75; Bacteria - 2860; Metazoa - 268; Fungi - 933; Plants - 2492; Viruses - 10; Other Eukaryotes - 1764 (source: NCBI BLink). & (gnl|cdd|36715 : 106.0) no description available & (reliability: 284.0) & (original description: Putative cad, Description = Cinnamyl alcohol dehydrogenase, PFAM = )' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf03253_3297-25079' '(at1g66800 : 102.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root, pollen tube; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 12055 Blast hits to 12042 proteins in 2029 species: Archae - 224; Bacteria - 5367; Metazoa - 406; Fungi - 979; Plants - 2431; Viruses - 61; Other Eukaryotes - 2587 (source: NCBI BLink). & (gnl|cdd|36715 : 89.2) no description available & (reliability: 204.0) & (original description: Putative cad, Description = Cinnamyl alcohol dehydrogenase, PFAM = )' T
'26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf04869_495436-507499' '(at1g51410 : 507.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19440.1); Has 8402 Blast hits to 8385 proteins in 1446 species: Archae - 75; Bacteria - 2860; Metazoa - 268; Fungi - 933; Plants - 2492; Viruses - 10; Other Eukaryotes - 1764 (source: NCBI BLink). & (gnl|cdd|36715 : 425.0) no description available & (p51104|dfra_diaca : 251.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 126.0) no description available & (reliability: 1014.0) & (original description: Putative cad2, Description = Cinnamoyl alcohol dehydrogenase, PFAM = PF01370)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold6210_1674-6392' '(gnl|cdd|29388 : 419.0) no description available & (at3g01190 : 412.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 335.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative POD1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold9821_41490-45098' '(at1g44970 : 471.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 464.0) no description available & (p22195|per1_arahy : 323.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 942.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold17442_2174-7341' '(at1g68850 : 463.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G36430.1); Has 4434 Blast hits to 4410 proteins in 271 species: Archae - 0; Bacteria - 4; Metazoa - 19; Fungi - 149; Plants - 4210; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|29388 : 408.0) no description available & (p22195|per1_arahy : 262.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 926.0) & (original description: Putative PER11, Description = Peroxidase 11, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold18206_9193-21529' '(gnl|cdd|29388 : 266.0) no description available & (at5g17820 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 177.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 364.0) & (original description: Putative prx34, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold27514_24292-26937' '(gnl|cdd|29388 : 423.0) no description available & (p22195|per1_arahy : 352.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 329.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold29570_219-2960' '(gnl|cdd|29388 : 188.0) no description available & (at4g33870 : 129.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22196|per2_arahy : 105.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 258.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold33168_2763-8828' '(gnl|cdd|29388 : 372.0) no description available & (at5g22410 : 309.0) root hair specific 18 (RHS18); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root, synergid; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 3762 Blast hits to 3747 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 14; Plants - 3739; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 618.0) & (original description: Putative PER60, Description = Peroxidase 60, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold41761_5047-9442' '(gnl|cdd|29388 : 460.0) no description available & (at5g06720 : 372.0) peroxidase 2 (PA2); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p11965|perx_tobac : 340.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 744.0) & (original description: Putative pod, Description = Peroxidase 15, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold46761_7900-11324' '(at5g51890 : 457.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p37834|per1_orysa : 238.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 914.0) & (original description: Putative PER66, Description = Peroxidase 66, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold51919_1-3500' '(gnl|cdd|29388 : 216.0) no description available & (at4g33870 : 142.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 115.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 284.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold54984_9810-13453' '(at4g25980 : 447.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 378.0) no description available & (p22196|per2_arahy : 306.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 894.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold77959_5950-7569' '(at1g05260 : 224.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 189.0) no description available & (p37834|per1_orysa : 176.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 426.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold91781_1-4784' '(p12437|perx_soltu : 449.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 350.0) no description available & (at5g05340 : 204.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.3scaffold108878_536-3057' '(gnl|cdd|29388 : 129.0) no description available & (at4g11290 : 105.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37834|per1_orysa : 98.6) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 210.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold138_318934-323187' '(gnl|cdd|29388 : 346.0) no description available & (at4g33870 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22196|per2_arahy : 221.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 622.0) & (original description: Putative PER48, Description = Putative Peroxidase 48, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold897_391847-395440' '(gnl|cdd|29388 : 400.0) no description available & (at2g39040 : 363.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 271.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 726.0) & (original description: Putative PER24, Description = Peroxidase 24, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold900_446030-449840' '(at1g71695 : 419.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 385.0) no description available & (p22195|per1_arahy : 230.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 838.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold1421_110696-114654' '(gnl|cdd|29388 : 283.0) no description available & (at4g25980 : 280.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p22196|per2_arahy : 212.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 560.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141;PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold2239_194199-196880' '(at5g05340 : 177.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 177.0) no description available & (p00434|perp7_brara : 169.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 354.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold2646_62577-68015' '(at5g42180 : 417.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 401.0) no description available & (p37834|per1_orysa : 256.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 834.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold3031_237911-241947' '(at2g41480 : 356.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|29388 : 315.0) no description available & (p22196|per2_arahy : 305.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 712.0) & (original description: Putative PER25, Description = Peroxidase 25, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold3281_135575-140616' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 359.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 331.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold4724_89933-93624' '(at1g71695 : 431.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 405.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative PER12, Description = Peroxidase 12, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'nbv0.5scaffold8901_8169-13170' '(at1g44970 : 469.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 438.0) no description available & (p22195|per1_arahy : 299.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 938.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00001827ctg010_4979-8471' '(at5g51890 : 448.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 896.0) & (original description: Putative PER66, Description = Peroxidase 66, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00002096ctg005_54504-57988' '(at5g66390 : 475.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p11965|perx_tobac : 283.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 950.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00010265ctg020_28484-32510' '(at1g71695 : 430.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p22195|per1_arahy : 238.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 860.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 496.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00018141ctg012_1-2555' '(at4g25980 : 238.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 204.0) no description available & (p22196|per2_arahy : 160.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 476.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00024562ctg004_20041-23897' '(at1g05260 : 428.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 421.0) no description available & (p37834|per1_orysa : 333.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 802.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00030439ctg000_1730-5332' '(at4g21960 : 547.0) Encodes AT4g21960 (AT4g21960/T8O5_170).; PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 362.0) no description available & (p00434|perp7_brara : 189.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 1094.0) & (original description: Putative prx, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00032616ctg002_1200-4693' '(gnl|cdd|29388 : 135.0) no description available & (at4g33870 : 109.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 105.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00032698ctg001_13408-15976' '(at5g67400 : 452.0) root hair specific 19 (RHS19); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G49960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 392.0) no description available & (p37834|per1_orysa : 232.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 904.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00034984ctg012_6366-9220' '(gnl|cdd|29388 : 237.0) no description available & (at2g39040 : 200.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p22196|per2_arahy : 162.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 400.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben044scf00037141ctg001_18787-22968' '(gnl|cdd|29388 : 330.0) no description available & (at4g11290 : 232.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 222.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 464.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00308_61291-65015' '(gnl|cdd|29388 : 414.0) no description available & (at3g21770 : 275.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, nucleus, plant-type cell wall, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 4451 Blast hits to 4425 proteins in 278 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 123; Plants - 4268; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p37834|per1_orysa : 265.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 550.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 508.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00638_159106-167261' '(at4g32320 : 366.0) Encodes a cytosolic ascorbate peroxidase APX6. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 6 (APX6); FUNCTIONS IN: L-ascorbate peroxidase activity, peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 8064 Blast hits to 8032 proteins in 1269 species: Archae - 53; Bacteria - 2233; Metazoa - 2; Fungi - 806; Plants - 4037; Viruses - 0; Other Eukaryotes - 933 (source: NCBI BLink). & (gnl|cdd|29386 : 183.0) no description available & (p93404|apx1_orysa : 150.0) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa) (OsAPx01) - Oryza sativa (Rice) & (reliability: 732.0) & (original description: Putative apx2, Description = L-ascorbate peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00646_1080330-1084598' '(at4g25980 : 417.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 374.0) no description available & (p22196|per2_arahy : 275.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 834.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00679_491038-495110' '(gnl|cdd|29388 : 419.0) no description available & (at3g01190 : 404.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 338.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 808.0) & (original description: Putative PER27, Description = Peroxidase 27, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00709_242362-246078' '(at4g37530 : 452.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37520.1); Has 4481 Blast hits to 4468 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 180; Plants - 4223; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 904.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00751_55575-60165' '(at4g33420 : 442.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 398.0) no description available & (p22196|per2_arahy : 276.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 884.0) & (original description: Putative PER47, Description = Peroxidase 47, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf00851_24457-30985' '(gnl|cdd|29388 : 370.0) no description available & (at5g22410 : 303.0) root hair specific 18 (RHS18); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root, synergid; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 3762 Blast hits to 3747 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 14; Plants - 3739; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 606.0) & (original description: Putative PER60, Description = Peroxidase 60, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01037_281173-284764' '(at1g05260 : 433.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 415.0) no description available & (p37834|per1_orysa : 322.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01208_286261-290216' '(gnl|cdd|29388 : 355.0) no description available & (at4g26010 : 335.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 233.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 670.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01212_224580-229252' '(at2g34060 : 439.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4452 Blast hits to 4430 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 117; Plants - 4266; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|29388 : 386.0) no description available & (p22196|per2_arahy : 235.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 878.0) & (original description: Putative PER19, Description = Peroxidase 19, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01230_250993-254852' '(gnl|cdd|29388 : 353.0) no description available & (at3g03670 : 235.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 227.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 470.0) & (original description: Putative px1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01237_1162725-1167652' '(gnl|cdd|29388 : 444.0) no description available & (at5g05340 : 400.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 381.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 800.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01237_1165263-1167937' '(gnl|cdd|29388 : 176.0) no description available & (at5g05340 : 165.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 159.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 330.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01290_100093-105952' '(gnl|cdd|29388 : 428.0) no description available & (p22195|per1_arahy : 409.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 346.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01374_93484-97796' '(gnl|cdd|29388 : 314.0) no description available & (at3g17070 : 254.0) Peroxidase family protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G40150.1); Has 4731 Blast hits to 4708 proteins in 320 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 403; Plants - 4233; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (p37834|per1_orysa : 187.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative PER29, Description = Peroxidase 29, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01380_301847-312064' '(gnl|cdd|29388 : 311.0) no description available & (at4g33870 : 218.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22195|per1_arahy : 186.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 436.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01453_622259-627525' '(at1g71695 : 439.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p22195|per1_arahy : 244.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 878.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01466_90226-94462' '(at2g22420 : 504.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p11965|perx_tobac : 251.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 1008.0) & (original description: Putative PER17, Description = Peroxidase 17, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01494_929590-932702' '(gnl|cdd|29388 : 381.0) no description available & (at1g24110 : 371.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4783 Blast hits to 4756 proteins in 324 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 401; Plants - 4296; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 211.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 742.0) & (original description: Putative PER6, Description = Peroxidase 6, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01676_41923-45553' '(at5g66390 : 484.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p11965|perx_tobac : 282.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 968.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01676_46439-50382' '(at5g66390 : 464.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 463.0) no description available & (p11965|perx_tobac : 286.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01702_118374-122132' '(at5g42180 : 465.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p37834|per1_orysa : 271.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 930.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01720_50338-54659' '(gnl|cdd|29388 : 432.0) no description available & (at3g01190 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 368.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01721_753164-758890' '(at2g24800 : 409.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G31760.1); Has 4841 Blast hits to 4814 proteins in 324 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 415; Plants - 4336; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29388 : 380.0) no description available & (p22196|per2_arahy : 233.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 818.0) & (original description: Putative PER46, Description = Peroxidase 46, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01916_112836-119293' '(at1g68850 : 463.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G36430.1); Has 4434 Blast hits to 4410 proteins in 271 species: Archae - 0; Bacteria - 4; Metazoa - 19; Fungi - 149; Plants - 4210; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|29388 : 409.0) no description available & (p22195|per1_arahy : 263.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 926.0) & (original description: Putative PER11, Description = Peroxidase 11, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 520.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf01920_14036-17426' '(gnl|cdd|29388 : 386.0) no description available & (at1g44970 : 266.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 256.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 532.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02298_130309-135101' '(gnl|cdd|29388 : 421.0) no description available & (at3g01190 : 415.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 335.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02349_186131-191150' '(p12437|perx_soltu : 435.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 351.0) no description available & (at5g05340 : 201.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02349_332677-337589' '(p12437|perx_soltu : 439.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 350.0) no description available & (at5g05340 : 207.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative TAP1, Description = Suberization-associated anionic peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02349_384823-388482' '(p12437|perx_soltu : 414.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 353.0) no description available & (at5g05340 : 189.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative TAP1, Description = Suberization-associated anionic peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02709_107368-111022' '(gnl|cdd|29388 : 411.0) no description available & (at2g39040 : 337.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 257.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 674.0) & (original description: Putative PER24, Description = Peroxidase 24, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02818_133400-137533' '(gnl|cdd|29388 : 169.0) no description available & (at2g39040 : 159.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 108.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 318.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02864_270063-274268' '(gnl|cdd|29388 : 460.0) no description available & (at5g66390 : 441.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37835|per2_orysa : 254.0) Peroxidase 2 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 882.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf02968_675414-678213' '(at1g05260 : 179.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 168.0) no description available & (p37834|per1_orysa : 137.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03300_207374-211237' '(gnl|cdd|29388 : 439.0) no description available & (at1g49570 : 423.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, leaf whorl, hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 4743 Blast hits to 4717 proteins in 317 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 358; Plants - 4305; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (p00434|perp7_brara : 306.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 846.0) & (original description: Putative PER10, Description = Peroxidase 10, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03460_390279-395137' '(p11965|perx_tobac : 590.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29388 : 437.0) no description available & (at5g06720 : 398.0) peroxidase 2 (PA2); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative aprx, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03790_143080-146765' '(gnl|cdd|29388 : 393.0) no description available & (at5g17820 : 315.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 630.0) & (original description: Putative PER57, Description = Peroxidase 57, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03927_289457-292693' '(gnl|cdd|29388 : 422.0) no description available & (p22195|per1_arahy : 335.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03947_26841-30371' '(at5g42180 : 391.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 390.0) no description available & (p22196|per2_arahy : 256.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 782.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf03990_52730-58655' '(at2g37130 : 480.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 359.0) no description available & (p00434|perp7_brara : 193.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 960.0) & (original description: Putative pa8, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04060_276805-280179' '(at5g42180 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 400.0) no description available & (p37834|per1_orysa : 254.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 810.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04069_35554-39151' '(gnl|cdd|29388 : 364.0) no description available & (at4g26010 : 332.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 232.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|37135 : 89.7) no description available & (reliability: 664.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04220_262344-266828' '(gnl|cdd|29388 : 431.0) no description available & (at3g01190 : 409.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 368.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04220_329346-332809' '(at1g05260 : 418.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p37834|per1_orysa : 331.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 790.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04220_435980-439250' '(gnl|cdd|29388 : 426.0) no description available & (at3g01190 : 410.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 350.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 820.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf04627_553324-560321' '(at2g41480 : 451.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p22196|per2_arahy : 400.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 902.0) & (original description: Putative PER25, Description = Peroxidase 25, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf05407_340820-344974' '(gnl|cdd|29388 : 385.0) no description available & (at4g26010 : 348.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 254.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 696.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf05541_171350-175118' '(gnl|cdd|29388 : 375.0) no description available & (at1g30870 : 345.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G49570.1); Has 4658 Blast hits to 4636 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 376; Plants - 4203; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 690.0) & (original description: Putative PER7, Description = Peroxidase 7, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf05566_472450-478250' '(at2g22420 : 504.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 417.0) no description available & (p22195|per1_arahy : 254.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 1008.0) & (original description: Putative PER17, Description = Peroxidase 17, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf05649_126495-131329' '(at4g33420 : 273.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 252.0) no description available & (p22196|per2_arahy : 188.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 546.0) & (original description: Putative PrxFl1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf05764_217370-221084' '(at5g66390 : 478.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p22195|per1_arahy : 296.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 956.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06277_329389-332861' '(gnl|cdd|29388 : 448.0) no description available & (at1g49570 : 403.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, leaf whorl, hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 4743 Blast hits to 4717 proteins in 317 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 358; Plants - 4305; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q02200|perx_nicsy : 308.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (reliability: 806.0) & (original description: Putative PER10, Description = Peroxidase 10, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06280_673656-676642' '(at5g40150 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G28200.1); Has 4869 Blast hits to 4842 proteins in 335 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 470; Plants - 4311; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|29388 : 392.0) no description available & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 814.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06397_333159-336715' '(at2g37130 : 175.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 150.0) no description available & (p37834|per1_orysa : 100.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 350.0) & (original description: Putative pa8, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06439_48509-55636' '(at5g24070 : 365.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G43480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 315.0) no description available & (p22196|per2_arahy : 195.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 730.0) & (original description: Putative PER61, Description = Probable peroxidase 61, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06602_52476-55975' '(at1g05260 : 460.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p37834|per1_orysa : 349.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 874.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06686_46243-49851' '(at1g44970 : 469.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 463.0) no description available & (p22195|per1_arahy : 323.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 938.0) & (original description: Putative prx5, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf06778_686124-690957' '(gnl|cdd|29388 : 398.0) no description available & (at2g18980 : 389.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (p37834|per1_orysa : 243.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 778.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf07182_585304-620582' '(gnl|cdd|29388 : 439.0) no description available & (at5g19890 : 395.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p11965|perx_tobac : 308.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 790.0) & (original description: Putative HRPN, Description = Peroxidase N, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf07388_53558-56999' '(at1g05260 : 431.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 418.0) no description available & (p37834|per1_orysa : 334.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative PER30, Description = Peroxidase 30, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf07693_10181-14673' '(gnl|cdd|29388 : 439.0) no description available & (p22195|per1_arahy : 418.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 360.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf08338_28705-32837' '(at4g21960 : 547.0) Encodes AT4g21960 (AT4g21960/T8O5_170).; PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 362.0) no description available & (p00434|perp7_brara : 189.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 1094.0) & (original description: Putative prx, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf08519_172009-175829' '(gnl|cdd|29388 : 433.0) no description available & (q02200|perx_nicsy : 432.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 372.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf08566_808693-812306' '(p22196|per2_arahy : 456.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|29388 : 410.0) no description available & (at2g41480 : 399.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative poxN1, Description = Peroxidase N1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf08566_831424-835184' '(p22196|per2_arahy : 464.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|29388 : 419.0) no description available & (at2g41480 : 411.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 822.0) & (original description: Putative poxN1, Description = Peroxidase N1, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf08670_66697-71804' '(at2g34060 : 441.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4452 Blast hits to 4430 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 117; Plants - 4266; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|29388 : 395.0) no description available & (p22196|per2_arahy : 240.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 882.0) & (original description: Putative PER19, Description = Peroxidase 19, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf09082_20390-26831' '(gnl|cdd|29388 : 446.0) no description available & (at5g05340 : 373.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 366.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 746.0) & (original description: Putative PER52, Description = Peroxidase 52, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf09141_52496-55000' '(gnl|cdd|29388 : 171.0) no description available & (p22195|per1_arahy : 151.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 147.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf09248_342668-346362' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 336.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 312.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative rip1, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf09548_144374-147357' '(at5g40150 : 425.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G28200.1); Has 4869 Blast hits to 4842 proteins in 335 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 470; Plants - 4311; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|29388 : 384.0) no description available & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 850.0) & (original description: Putative PER63, Description = Peroxidase 63, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf10158_141582-176554' '(at4g17690 : 357.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 351.0) no description available & (p22196|per2_arahy : 216.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 714.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf10158_175308-178270' '(at4g17690 : 357.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 349.0) no description available & (p22196|per2_arahy : 216.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 714.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf10162_181972-186153' '(gnl|cdd|29388 : 326.0) no description available & (at4g11290 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 462.0) & (original description: Putative PRX70, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf10997_377270-380904' '(gnl|cdd|29388 : 415.0) no description available & (at4g16270 : 399.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 4922 Blast hits to 4898 proteins in 352 species: Archae - 0; Bacteria - 20; Metazoa - 11; Fungi - 467; Plants - 4342; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (p22195|per1_arahy : 288.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 798.0) & (original description: Putative PER40, Description = Peroxidase 40, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf11994_85453-89585' '(at2g18980 : 436.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29388 : 402.0) no description available & (p37834|per1_orysa : 221.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 872.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf12373_66412-70585' '(gnl|cdd|29388 : 448.0) no description available & (at5g05340 : 367.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 363.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 734.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf13029_354494-357670' '(gnl|cdd|29388 : 389.0) no description available & (at1g44970 : 257.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22195|per1_arahy : 256.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 514.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf13916_50866-54986' '(at4g25980 : 437.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 370.0) no description available & (p22196|per2_arahy : 297.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 874.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf14939_240769-243981' '(gnl|cdd|29388 : 398.0) no description available & (at5g14130 : 393.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, fruit, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4547 Blast hits to 4517 proteins in 291 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 177; Plants - 4298; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p37834|per1_orysa : 216.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 786.0) & (original description: Putative PER55, Description = Peroxidase 55, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf15496_82121-85095' '(at4g17690 : 370.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 368.0) no description available & (p22196|per2_arahy : 217.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 740.0) & (original description: Putative PER41, Description = Peroxidase 41, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf15515_178239-184299' '(gnl|cdd|29388 : 440.0) no description available & (p22195|per1_arahy : 394.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 347.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative px4, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf15995_56768-62964' '(gnl|cdd|29388 : 318.0) no description available & (at4g25980 : 296.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 592.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141;PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf16024_17896-22272' '(at2g18980 : 477.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29388 : 403.0) no description available & (p37834|per1_orysa : 239.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 954.0) & (original description: Putative PER16, Description = Peroxidase 16, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf16107_53242-86613' '(at1g71695 : 431.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 407.0) no description available & (p37834|per1_orysa : 239.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf16622_86824-91591' '(gnl|cdd|29388 : 465.0) no description available & (at5g66390 : 454.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22195|per1_arahy : 267.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 908.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf20924_190174-193455' '(at1g05260 : 287.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 237.0) no description available & (p37834|per1_orysa : 223.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 532.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T
'26.12' 'misc.peroxidases' 'niben101scf23113_191733-194185' '(gnl|cdd|29388 : 193.0) no description available & (at5g05340 : 184.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 174.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 368.0) & (original description: Putative PER6, Description = Peroxidase, PFAM = PF00141)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold5769_4095-24949' '(at3g52820 : 622.0) purple acid phosphatase 22 (PAP22); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 21 (TAIR:AT3G52810.1); Has 2151 Blast hits to 2132 proteins in 447 species: Archae - 3; Bacteria - 778; Metazoa - 239; Fungi - 77; Plants - 761; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|36592 : 410.0) no description available & (q09131|ppaf_soybn : 281.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1244.0) & (original description: Putative PAP22, Description = Purple acid phosphatase 22, PFAM = PF14008;PF00149;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold10575_33642-47384' '(at5g50400 : 837.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 568.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 337.0) no description available & (reliability: 1674.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold13497_22680-27143' '(at1g07630 : 630.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 354.0) no description available & (gnl|cdd|29062 : 133.0) no description available & (reliability: 1260.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold19783_13649-16749' '(gnl|cdd|36593 : 219.0) no description available & (at4g16580 : 210.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|29062 : 80.8) no description available & (reliability: 404.0) & (original description: Putative dl4315c, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold20758_6906-29220' '(at5g15070 : 1737.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 1103.0) no description available & (gnl|cdd|84696 : 90.2) no description available & (reliability: 3474.0) & (original description: Putative ppip5k2, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold23737_17080-22551' '(at3g54020 : 503.0) Inositol phosphorylceramide synthase; Arabidopsis Inositol phosphorylceramide synthase 1 (AtIPCS1); FUNCTIONS IN: inositol phosphoceramide synthase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 2 (TAIR:AT2G37940.1); Has 447 Blast hits to 444 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|38268 : 247.0) no description available & (reliability: 1006.0) & (original description: Putative IPCS1, Description = Phosphatidylinositol:ceramide inositolphosphotransferase 1, PFAM = PF14360)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold24742_3727-8276' '(at3g15820 : 327.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ROD1, Description = Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold29219_5877-11196' '(at5g66450 : 196.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38356 : 134.0) no description available & (gnl|cdd|48087 : 98.0) no description available & (reliability: 392.0) & (original description: Putative BnaA07g12610D, Description = BnaA07g12610D protein, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold33243_5027-11602' '(at3g02600 : 427.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 265.0) no description available & (gnl|cdd|48094 : 240.0) no description available & (reliability: 854.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold55614_1692-10868' '(at1g09870 : 457.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 259.0) no description available & (gnl|cdd|84696 : 112.0) no description available & (reliability: 914.0) & (original description: Putative At1g09870, Description = At1g09870/F21M12_26, PFAM = PF00328;PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold75731_720-5148' '(at2g28890 : 612.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|35919 : 361.0) no description available & (gnl|cdd|29062 : 140.0) no description available & (reliability: 1224.0) & (original description: Putative PLL4, Description = Probable protein phosphatase 2C 23, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold32_1277663-1299977' '(at5g15070 : 1434.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 836.0) no description available & (gnl|cdd|84696 : 91.0) no description available & (reliability: 2868.0) & (original description: Putative At3g01310, Description = Putative uncharacterized protein At3g01310, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold449_732276-743144' '(at4g14930 : 264.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80628 : 159.0) no description available & (reliability: 528.0) & (original description: Putative surE, Description = Survival protein SurE-like phosphatase/nucleotidase, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold2258_104727-114128' '(at5g50400 : 841.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 479.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 334.0) no description available & (reliability: 1682.0) & (original description: Putative ppd3, Description = Putative metallophosphatase, PFAM = PF14008;PF00149;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold2693_120779-134214' '(at5g50400 : 348.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36592 : 246.0) no description available & (q687e1|npp_horvu : 206.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 696.0) & (original description: Putative NPP1, Description = Purple acid phosphatase, PFAM = PF14008;PF00149;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00001706ctg010_1493-5191' '(at1g17710 : 369.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 345.0) no description available & (gnl|cdd|38330 : 325.0) no description available & (reliability: 738.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00011108ctg011_33281-36316' '(at5g45700 : 212.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 197.0) no description available & (gnl|cdd|47876 : 169.0) no description available & (reliability: 424.0) & (original description: Putative At5g45700, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00012466ctg002_3689-6060' '(gnl|cdd|67385 : 167.0) no description available & (at4g29260 : 165.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 119.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative APS1, Description = HAD superfamily, subfamily IIIB acid phosphatase, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00012513ctg003_48672-59076' '(at1g07990 : 902.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 548.0) no description available & (gnl|cdd|68084 : 344.0) no description available & (reliability: 1804.0) & (original description: Putative BnaA08g17320D, Description = BnaA08g17320D protein, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00013631ctg000_665-12661' '(at5g50400 : 904.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 568.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 331.0) no description available & (reliability: 1808.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00013645ctg009_2737-11325' '(at1g07990 : 703.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 415.0) no description available & (gnl|cdd|68084 : 334.0) no description available & (reliability: 1406.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00013645ctg010_1762-7079' '(at3g45190 : 249.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 157.0) no description available & (reliability: 498.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00019018ctg005_2626-11862' '(at3g45190 : 563.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 390.0) no description available & (gnl|cdd|68084 : 342.0) no description available & (reliability: 1126.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00020058ctg012_699-5440' '(at2g28890 : 609.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|35919 : 358.0) no description available & (gnl|cdd|29062 : 137.0) no description available & (reliability: 1218.0) & (original description: Putative BnaA08g29070D, Description = BnaA08g29070D protein, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00027633ctg003_1-4307' '(at3g01310 : 273.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36275 : 229.0) no description available & (reliability: 504.0) & (original description: Putative vip2, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00046686ctg002_16065-19825' '(at1g07630 : 548.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 296.0) no description available & (gnl|cdd|29062 : 124.0) no description available & (reliability: 1096.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'niben044scf00053423ctg001_62-6744' '(at1g72880 : 403.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 153.0) no description available & (reliability: 806.0) & (original description: Putative At1g72880, Description = At1g72880, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'niben101ctg16346_700-6787' '(q09131|ppaf_soybn : 743.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g16430 : 731.0) purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|36592 : 461.0) no description available & (gnl|cdd|84562 : 91.5) no description available & (reliability: 1462.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF00149;PF16656;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00039_128464-144034' '(at5g50400 : 364.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36592 : 264.0) no description available & (q687e1|npp_horvu : 222.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 728.0) & (original description: Putative NPP1, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00073_638161-641471' '(at5g45700 : 218.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 193.0) no description available & (gnl|cdd|47876 : 168.0) no description available & (reliability: 436.0) & (original description: Putative At5g45700, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00133_242596-253333' '(at1g09870 : 660.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 342.0) no description available & (gnl|cdd|84696 : 142.0) no description available & (reliability: 1320.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00157_26497-32345' '(at3g20500 : 700.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 401.0) no description available & (q09131|ppaf_soybn : 274.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1400.0) & (original description: Putative PAP18, Description = Purple acid phosphatase 18, PFAM = PF00149;PF16656;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00219_227689-243841' '(at4g11800 : 1529.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3058.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00231_778199-782751' '(at3g02600 : 355.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 231.0) no description available & (gnl|cdd|48094 : 223.0) no description available & (reliability: 710.0) & (original description: Putative LPP1, Description = Lipid phosphate phosphatase 1, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00444_62988-68205' '(at1g07630 : 796.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 304.0) no description available & (gnl|cdd|29062 : 133.0) no description available & (reliability: 1592.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00507_28934-33497' '(at5g18980 : 947.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G06210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1892.0) & (original description: Putative dl3180w, Description = Putative uncharacterized protein AT4g14280, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00825_61421-71088' '(at5g46410 : 350.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 4 (SSP4); CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4b (TAIR:AT4G18140.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36818 : 233.0) no description available & (gnl|cdd|86219 : 187.0) no description available & (reliability: 700.0) & (original description: Putative SSP4, Description = SCP1-like small phosphatase 4, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf00870_1791522-1797011' '(at1g72880 : 417.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 152.0) no description available & (reliability: 834.0) & (original description: Putative At1g72880, Description = At1g72880, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01273_180000-185673' '(at5g11860 : 337.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 5; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2780 Blast hits to 2771 proteins in 250 species: Archae - 0; Bacteria - 14; Metazoa - 839; Fungi - 559; Plants - 525; Viruses - 1; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|36818 : 251.0) no description available & (gnl|cdd|86219 : 184.0) no description available & (reliability: 674.0) & (original description: Putative NIF4, Description = Putative nuclear LIM interactor-interacting protein, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01317_249272-253733' '(at1g07630 : 627.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 357.0) no description available & (gnl|cdd|29062 : 138.0) no description available & (reliability: 1254.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01326_1057268-1076185' '(at5g15070 : 1545.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 1001.0) no description available & (gnl|cdd|84696 : 88.6) no description available & (reliability: 3090.0) & (original description: Putative FAP160, Description = Acid phosphatase, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01374_1532315-1535445' '(gnl|cdd|67385 : 257.0) no description available & (at4g25150 : 224.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p15490|vspa_soybn : 208.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 448.0) & (original description: Putative VSPA, Description = Stem 28 kDa glycoprotein, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01406_160020-165288' '(at2g37940 : 505.0) I; Arabidopsis Inositol phosphorylceramide synthase 2 (AtIPCS2); BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 1 (TAIR:AT3G54020.1); Has 438 Blast hits to 435 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 250; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38268 : 247.0) no description available & (reliability: 988.0) & (original description: Putative IPCS2, Description = Phosphatidylinositol:ceramide inositolphosphotransferase 2, PFAM = PF14360)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01435_141189-155120' '(at5g50400 : 910.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 538.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 349.0) no description available & (reliability: 1820.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF16656;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01697_2140221-2150228' '(at2g35320 : 395.0) homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.; EYES ABSENT homolog (EYA); CONTAINS InterPro DOMAIN/s: EYA (InterPro:IPR006545); Has 432 Blast hits to 431 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|38317 : 273.0) no description available & (reliability: 790.0) & (original description: Putative EYA, Description = At2g35320/T4C15.1, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01759_621340-633000' '(at3g45190 : 924.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 548.0) no description available & (gnl|cdd|68084 : 338.0) no description available & (reliability: 1848.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01830_161646-170833' '(at5g50400 : 905.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 539.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 347.0) no description available & (reliability: 1810.0) & (original description: Putative npp, Description = Nucleotide pyrophosphatase/phosphodiesterase, PFAM = PF14008;PF00149;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01831_233536-241272' '(at5g57140 : 479.0) purple acid phosphatase 28 (PAP28); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 29 (TAIR:AT5G63140.1); Has 678 Blast hits to 661 proteins in 227 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 205; Plants - 115; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36645 : 395.0) no description available & (reliability: 958.0) & (original description: Putative PAP28, Description = Probable inactive purple acid phosphatase 28, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01842_173921-182338' '(at3g52780 : 577.0) PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2133 Blast hits to 2115 proteins in 453 species: Archae - 1; Bacteria - 782; Metazoa - 195; Fungi - 75; Plants - 759; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|36592 : 423.0) no description available & (p80366|ppaf_phavu : 289.0) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2) (PAP) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1154.0) & (original description: Putative PAP20, Description = Probable purple acid phosphatase 20, PFAM = PF14008;PF16656;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01887_865363-879825' '(at4g23000 : 1548.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species: Archae - 0; Bacteria - 98; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 3090.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf01912_72259-87513' '(at3g01510 : 818.0) Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.; like SEX4 1 (LSF1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: starch catabolic process; LOCATED IN: starch grain, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), PDZ/DHR/GLGF (InterPro:IPR001478), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.1); Has 834 Blast hits to 834 proteins in 152 species: Archae - 0; Bacteria - 14; Metazoa - 310; Fungi - 61; Plants - 322; Viruses - 12; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|30346 : 94.2) no description available & (gnl|cdd|36829 : 90.9) no description available & (reliability: 1636.0) & (original description: Putative LSF1, Description = Phosphoglucan phosphatase LSF1, chloroplastic, PFAM = PF00782;PF16561)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02253_1114158-1141161' '(at3g01310 : 1722.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36275 : 1103.0) no description available & (gnl|cdd|84696 : 89.0) no description available & (reliability: 3428.0) & (original description: Putative VIP1, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02446_88605-93762' '(at5g66450 : 189.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38356 : 138.0) no description available & (gnl|cdd|48087 : 99.5) no description available & (reliability: 378.0) & (original description: Putative BnaA07g12610D, Description = BnaA07g12610D protein, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02511_654120-662387' '(at1g13750 : 917.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 521.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 345.0) no description available & (reliability: 1834.0) & (original description: Putative ppd1, Description = Purple acid phosphatase, PFAM = PF00149;PF14008;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02731_607882-616017' '(at2g35320 : 385.0) homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.; EYES ABSENT homolog (EYA); CONTAINS InterPro DOMAIN/s: EYA (InterPro:IPR006545); Has 432 Blast hits to 431 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|38317 : 262.0) no description available & (reliability: 770.0) & (original description: Putative EYA, Description = At2g35320/T4C15.1, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02816_188041-192165' '(at1g17710 : 307.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 303.0) no description available & (gnl|cdd|38330 : 290.0) no description available & (reliability: 614.0) & (original description: Putative At4g29530, Description = Inorganic pyrophosphatase 3, PFAM = PF06888)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02831_505286-511930' '(at1g72880 : 414.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 149.0) no description available & (reliability: 828.0) & (original description: Putative surE, Description = 5'-nucleotidase surE, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf02909_230487-235895' '(gnl|cdd|36593 : 220.0) no description available & (at4g16580 : 212.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative dl4315c, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03022_17465-32253' '(gnl|cdd|37890 : 444.0) no description available & (at1g14700 : 439.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative PAP3, Description = Purple acid phosphatase 3, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03184_275069-288522' '(at5g50400 : 868.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 570.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 335.0) no description available & (reliability: 1736.0) & (original description: Putative npp, Description = Nucleotide pyrophosphatase/phosphodiesterase, PFAM = PF00149;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03184_275967-283589' '(at5g50400 : 620.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 418.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 268.0) no description available & (reliability: 1240.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03307_390223-401626' '(gnl|cdd|67385 : 277.0) no description available & (at4g29260 : 272.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 182.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 544.0) & (original description: Putative bci3, Description = Acid phosphatase 1, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03328_235107-238805' '(at1g17710 : 352.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 326.0) no description available & (gnl|cdd|38330 : 307.0) no description available & (reliability: 704.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03412_468295-484851' '(at1g09870 : 657.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 333.0) no description available & (gnl|cdd|84696 : 140.0) no description available & (reliability: 1314.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03613_59065-65164' '(q09131|ppaf_soybn : 749.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g16430 : 741.0) purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|36592 : 465.0) no description available & (gnl|cdd|84562 : 93.8) no description available & (reliability: 1482.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF16656;PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03651_21643-29415' '(at3g10150 : 484.0) purple acid phosphatase 16 (PAP16); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 28 (TAIR:AT5G57140.1); Has 563 Blast hits to 562 proteins in 197 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 196; Plants - 110; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|36645 : 276.0) no description available & (reliability: 968.0) & (original description: Putative PAP16, Description = Probable inactive purple acid phosphatase 16, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03755_436253-439264' '(gnl|cdd|67385 : 254.0) no description available & (at4g25150 : 234.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p15490|vspa_soybn : 199.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 468.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf03809_116568-122367' '(at4g25150 : 340.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|67385 : 294.0) no description available & (p15490|vspa_soybn : 207.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 680.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf04286_10550-14073' '(at3g17790 : 439.0) purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|37890 : 435.0) no description available & (reliability: 878.0) & (original description: Putative PAP17, Description = Purple acid phosphatase 17, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf04335_68975-76665' '(at1g13750 : 927.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 512.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 348.0) no description available & (reliability: 1854.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf04339_665824-675623' '(at3g20500 : 693.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 407.0) no description available & (q09131|ppaf_soybn : 277.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1386.0) & (original description: Putative PAP22, Description = Purple acid phosphatase 22, PFAM = PF14008;PF16656;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf04400_192829-200938' '(at1g13900 : 801.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 9 (TAIR:AT2G03450.1); Has 1738 Blast hits to 1720 proteins in 355 species: Archae - 1; Bacteria - 507; Metazoa - 197; Fungi - 77; Plants - 727; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36592 : 346.0) no description available & (q687e1|npp_horvu : 114.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 1602.0) & (original description: Putative PAP2, Description = Probable inactive purple acid phosphatase 2, PFAM = PF16656;PF00149;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf04918_20075-31571' '(at5g34850 : 731.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 523.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 435.0) no description available & (gnl|cdd|84562 : 85.7) no description available & (reliability: 1462.0) & (original description: Putative PAP1, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05017_555351-560383' '(at2g39920 : 212.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29260.1). & (gnl|cdd|67385 : 113.0) no description available & (reliability: 424.0) & (original description: Putative At2g39920, Description = Uncharacterized protein At2g39920, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05051_326992-344881' '(at1g07990 : 934.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 572.0) no description available & (gnl|cdd|68084 : 349.0) no description available & (reliability: 1868.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05330_154727-162267' '(at1g13750 : 947.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 516.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 346.0) no description available & (reliability: 1894.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF16656;PF00149;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05627_228768-235247' '(at3g02600 : 406.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 276.0) no description available & (gnl|cdd|48094 : 241.0) no description available & (reliability: 812.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05627_248687-253987' '(at1g15080 : 363.0) Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.; lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|38240 : 264.0) no description available & (gnl|cdd|48094 : 233.0) no description available & (reliability: 726.0) & (original description: Putative LPP2, Description = Lipid phosphate phosphatase 2, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf05948_210872-213753' '(at5g45700 : 213.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 198.0) no description available & (gnl|cdd|47876 : 168.0) no description available & (reliability: 426.0) & (original description: Putative v1g61841, Description = Predicted protein, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf06091_740612-744739' '(at3g15820 : 325.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At3g15830, Description = Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2, PFAM = )' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf06394_444948-451523' '(at3g02600 : 429.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 266.0) no description available & (gnl|cdd|48094 : 241.0) no description available & (reliability: 858.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf06501_693-4474' '(at4g14930 : 200.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative dl3505w, Description = Survival protein SurE-like phosphatase/nucleotidase, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf07239_67265-77302' '(at4g14930 : 323.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80628 : 176.0) no description available & (reliability: 646.0) & (original description: Putative At4g14930, Description = At4g14930, PFAM = PF01975)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf07687_240367-243233' '(at1g04040 : 297.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|67385 : 247.0) no description available & (p15490|vspa_soybn : 174.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 594.0) & (original description: Putative BnaC08g43690D, Description = BnaC08g43690D protein, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf08026_303747-314428' '(at2g46920 : 543.0) Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.; poltergeist (POL); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: protein myristoylation, regulation of meristem structural organization, protein palmitoylation, regulation of transcription, maintenance of meristem identity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 1 (TAIR:AT2G35350.1); Has 1941 Blast hits to 1802 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 295; Plants - 1017; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). & (gnl|cdd|35919 : 278.0) no description available & (gnl|cdd|29062 : 121.0) no description available & (reliability: 1086.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf08033_186406-191828' '(q09131|ppaf_soybn : 682.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g27190 : 681.0) secreted purple acid phosphatase precursor; purple acid phosphatase 12 (PAP12); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 10 (TAIR:AT2G16430.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36592 : 447.0) no description available & (gnl|cdd|84562 : 91.5) no description available & (reliability: 1362.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF00149;PF14008;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf08280_327111-334265' '(at3g07130 : 805.0) Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36592 : 392.0) no description available & (q09131|ppaf_soybn : 234.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1610.0) & (original description: Putative pap3, Description = Purple acid phosphatase, PFAM = PF14008;PF00149;PF16656)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf08478_628640-635517' '(at3g07130 : 797.0) Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36592 : 391.0) no description available & (q09131|ppaf_soybn : 229.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1594.0) & (original description: Putative PAP13, Description = Purple acid phosphatase 13, PFAM = PF00149;PF16656;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf09260_4217-19272' '(gnl|cdd|37890 : 440.0) no description available & (at1g14700 : 414.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative ACP5, Description = Purple acid phosphatase 3, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf09321_146508-149932' '(at1g73010 : 367.0) phosphate starvation-induced gene 2 (PS2); FUNCTIONS IN: phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 357 Blast hits to 345 proteins in 104 species: Archae - 0; Bacteria - 14; Metazoa - 174; Fungi - 18; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 336.0) no description available & (gnl|cdd|38330 : 322.0) no description available & (reliability: 734.0) & (original description: Putative PS2, Description = Inorganic pyrophosphatase 1, PFAM = PF06888)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf09929_349202-357932' '(at5g34850 : 734.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 525.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 430.0) no description available & (gnl|cdd|84562 : 83.4) no description available & (reliability: 1468.0) & (original description: Putative pap2, Description = Purple acid phosphatase, PFAM = PF00149;PF16656;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf09962_286356-299772' '(at3g45190 : 798.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 549.0) no description available & (gnl|cdd|68084 : 351.0) no description available & (reliability: 1596.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf10169_366150-381965' '(at1g09870 : 494.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 274.0) no description available & (gnl|cdd|84696 : 112.0) no description available & (reliability: 988.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328;PF00328)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf11154_81837-93894' '(at5g34850 : 736.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 525.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 439.0) no description available & (gnl|cdd|84562 : 80.3) no description available & (reliability: 1472.0) & (original description: Putative PAP26, Description = Bifunctional purple acid phosphatase 26, PFAM = PF14008;PF16656;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf12266_1044570-1048237' '(at3g15820 : 340.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative BnaA03g57520D, Description = BnaA03g57520D protein, PFAM = PF14360)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf12653_89604-95729' '(at5g11860 : 360.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 5; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2780 Blast hits to 2771 proteins in 250 species: Archae - 0; Bacteria - 14; Metazoa - 839; Fungi - 559; Plants - 525; Viruses - 1; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|36818 : 249.0) no description available & (gnl|cdd|86219 : 184.0) no description available & (reliability: 720.0) & (original description: Putative NIF4, Description = Putative nuclear LIM interactor-interacting protein, PFAM = PF03031)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf13762_159875-168790' '(at3g20500 : 699.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 409.0) no description available & (q09131|ppaf_soybn : 280.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1398.0) & (original description: Putative PAP18, Description = Purple acid phosphatase 18, PFAM = PF00149;PF16656;PF14008)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf13823_218258-223533' '(at5g63140 : 500.0) purple acid phosphatase 29 (PAP29); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 14 (TAIR:AT2G46880.1); Has 636 Blast hits to 631 proteins in 208 species: Archae - 0; Bacteria - 277; Metazoa - 0; Fungi - 208; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36645 : 409.0) no description available & (reliability: 1000.0) & (original description: Putative PAP29, Description = Probable inactive purple acid phosphatase 29, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf14274_119630-135356' '(gnl|cdd|67385 : 257.0) no description available & (at4g29260 : 249.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p10742|s25k_soybn : 170.0) Stem 31 kDa glycoprotein precursor (Vegetative storage protein VSP25) (Fragment) - Glycine max (Soybean) & (reliability: 498.0) & (original description: Putative bci3, Description = Acid phosphatase 1, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf14771_116494-126730' '(at5g50400 : 897.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 572.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 335.0) no description available & (reliability: 1794.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf14781_106349-111540' '(gnl|cdd|37890 : 446.0) no description available & (at3g17790 : 438.0) purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 876.0) & (original description: Putative PAP17, Description = Purple acid phosphatase 17, PFAM = PF00149)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf14799_5062-12256' '(at5g39400 : 539.0) PTEN1; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 2 (TAIR:AT3G19420.1); Has 1458 Blast hits to 1454 proteins in 210 species: Archae - 8; Bacteria - 27; Metazoa - 855; Fungi - 236; Plants - 75; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37494 : 256.0) no description available & (reliability: 1078.0) & (original description: Putative PTEN1, Description = Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1, PFAM = PF10409;PF00782)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf20596_6321-10307' '(at5g03080 : 303.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 881 Blast hits to 875 proteins in 378 species: Archae - 15; Bacteria - 412; Metazoa - 127; Fungi - 150; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38356 : 225.0) no description available & (gnl|cdd|48087 : 150.0) no description available & (reliability: 606.0) & (original description: Putative LPPG, Description = Lipid phosphate phosphatase gamma, chloroplastic, PFAM = PF01569)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf27183_23512-26595' '(at2g38600 : 327.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29260.1); Has 709 Blast hits to 704 proteins in 163 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 0; Plants - 374; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|67385 : 248.0) no description available & (p10743|vspb_soybn : 167.0) Stem 31 kDa glycoprotein precursor (Vegetative storage protein B) - Glycine max (Soybean) & (reliability: 654.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T
'26.13' 'misc.acid and other phosphatases' 'niben101scf34538_49825-53564' '(at1g73010 : 369.0) phosphate starvation-induced gene 2 (PS2); FUNCTIONS IN: phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 357 Blast hits to 345 proteins in 104 species: Archae - 0; Bacteria - 14; Metazoa - 174; Fungi - 18; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 336.0) no description available & (gnl|cdd|38330 : 324.0) no description available & (reliability: 738.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T
'26.14' 'misc.oxygenases' 'nbv0.3scaffold11469_1-15368' '(at2g17970 : 281.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 161.0) no description available & (reliability: 562.0) & (original description: Putative At1g48980, Description = Putative ovule protein, PFAM = PF13532)' T
'26.14' 'misc.oxygenases' 'nbv0.3scaffold36382_1-9239' '(at2g01490 : 422.0) phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|38500 : 272.0) no description available & (gnl|cdd|86931 : 157.0) no description available & (reliability: 844.0) & (original description: Putative phyhd1, Description = Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, PFAM = PF05721)' T
'26.14' 'misc.oxygenases' 'nbv0.5scaffold278_887388-893715' '(at1g52800 : 307.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 216.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (o04707|gao1a_wheat : 94.7) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 570.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T
'26.14' 'misc.oxygenases' 'nbv0.5scaffold674_505779-512432' '(at3g18210 : 457.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 293.0) no description available & (gnl|cdd|47971 : 82.0) no description available & (reliability: 914.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T
'26.14' 'misc.oxygenases' 'nbv0.5scaffold674_521166-525853' '(at3g18210 : 362.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 228.0) no description available & (reliability: 724.0) & (original description: Putative At1g22950, Description = Putative PKHD-type hydroxylase, PFAM = )' T
'26.14' 'misc.oxygenases' 'niben044scf00003743ctg015_500-5337' '(at3g18210 : 344.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 213.0) no description available & (reliability: 688.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T
'26.14' 'misc.oxygenases' 'niben044scf00018710ctg002_1-5473' '(at1g73680 : 930.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 366.0) no description available & (gnl|cdd|66752 : 326.0) no description available & (reliability: 1860.0) & (original description: Putative DOX2, Description = Alpha-dioxygenase 2, PFAM = PF03098)' T
'26.14' 'misc.oxygenases' 'niben101scf00188_236135-241098' '(at1g52790 : 333.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 240.0) no description available & (gnl|cdd|33294 : 103.0) no description available & (p93771|gaox1_orysa : 81.6) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 666.0) & (original description: Putative BnaA06g37440D, Description = BnaA06g37440D protein, PFAM = PF14226;PF03171)' T
'26.14' 'misc.oxygenases' 'niben101scf00878_82646-86608' '(at1g52800 : 245.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 191.0) no description available & (gnl|cdd|33294 : 106.0) no description available & (reliability: 450.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T
'26.14' 'misc.oxygenases' 'niben101scf01460_204994-212676' '(at3g18210 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 341.0) no description available & (gnl|cdd|47971 : 90.1) no description available & (reliability: 962.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T
'26.14' 'misc.oxygenases' 'niben101scf02122_72977-79114' '(at2g17970 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 218.0) no description available & (reliability: 740.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.14' 'misc.oxygenases' 'niben101scf02864_1149733-1155286' '(at2g17970 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 227.0) no description available & (reliability: 798.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.14' 'misc.oxygenases' 'niben101scf03735_256649-263293' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 244.0) no description available & (reliability: 1028.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.14' 'misc.oxygenases' 'niben101scf06267_338954-345391' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 241.0) no description available & (reliability: 1028.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T
'26.14' 'misc.oxygenases' 'niben101scf08884_18334-43245' '(at2g01490 : 426.0) phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|38500 : 281.0) no description available & (gnl|cdd|86931 : 162.0) no description available & (reliability: 852.0) & (original description: Putative PAHX, Description = Phytanoyl-CoA dioxygenase, PFAM = PF05721)' T
'26.14' 'misc.oxygenases' 'niben101scf11131_8202-13340' '(at1g52790 : 269.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 86.1) no description available & (reliability: 538.0) & (original description: Putative GAOX2, Description = Gibberellin 20 oxidase 2, PFAM = PF03171;PF14226)' T
'26.14' 'misc.oxygenases' 'niben101scf13316_40772-46678' '(at1g73680 : 945.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 374.0) no description available & (gnl|cdd|66752 : 332.0) no description available & (reliability: 1890.0) & (original description: Putative piox, Description = Putative alpha-dioxygenase, PFAM = PF03098)' T
'26.14' 'misc.oxygenases' 'niben101scf13316_106737-112857' '(at1g73680 : 958.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 386.0) no description available & (gnl|cdd|66752 : 351.0) no description available & (reliability: 1916.0) & (original description: Putative DOX2, Description = Alpha-dioxygenase 2, PFAM = PF03098)' T
'26.14' 'misc.oxygenases' 'niben101scf17767_64259-68202' '(at1g52800 : 286.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 115.0) no description available & (o04706|gao1b_wheat : 85.9) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 530.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF14226;PF03171)' T
'26.15' 'misc.carbonic anhydrases' '' ''
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold5452_12485-17639' '(at1g12710 : 367.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold5582_38-3093' '(gnl|cdd|84552 : 145.0) no description available & (at5g01090 : 118.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative POPTR_0006s09600g, Description = Alpha-amylase inhibitor alpha subunit family protein, PFAM = PF00139)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold12541_29130-32179' '(gnl|cdd|84552 : 142.0) no description available & (at5g01090 : 122.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold102_257709-260793' '(gnl|cdd|84552 : 144.0) no description available & (at5g01090 : 115.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold2224_179533-234553' '(at5g35370 : 119.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (q39688|ep1g_dauca : 100.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (gnl|cdd|85464 : 89.6) no description available & (reliability: 238.0) & (original description: Putative BLP1, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00954)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold2410_52057-57211' '(at3g61060 : 360.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben044scf00022029ctg001_4233-9179' '(at4g00340 : 900.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (p17801|kpro_maize : 246.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 168.0) no description available & (reliability: 1800.0) & (original description: Putative SD22, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2, PFAM = PF08276;PF00069;PF00954;PF01453)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben044scf00057692ctg000_16240-20976' '(at4g00340 : 903.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 321.0) no description available & (p17801|kpro_maize : 244.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 167.0) no description available & (reliability: 1806.0) & (original description: Putative SD22, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2, PFAM = PF01453;PF00954;PF00069)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00031_184937-187830' '(q39688|ep1g_dauca : 268.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (at1g78830 : 246.0) Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|28910 : 98.8) no description available & (reliability: 492.0) & (original description: Putative MBL2, Description = Mannose-binding lectin, PFAM = PF01453)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00031_227933-230826' '(q39688|ep1g_dauca : 291.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (at1g78830 : 266.0) Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|28910 : 107.0) no description available & (reliability: 532.0) & (original description: Putative MBL1, Description = Mannose-binding lectin, PFAM = PF01453)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00812_189647-194118' '(at3g61060 : 324.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF00646;PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01555_212572-217212' '(p17801|kpro_maize : 572.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at4g00340 : 342.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (gnl|cdd|84488 : 165.0) no description available & (reliability: 684.0) & (original description: Putative PGSC0003DMG400003313, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF01453;PF00069)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01696_722339-726711' '(at1g34300 : 363.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 330.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|84488 : 169.0) no description available & (reliability: 656.0) & (original description: Putative Os10g0101000, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00069;PF00954)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01764_91804-94682' '(at1g73040 : 206.0) Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G19715.2); Has 1381 Blast hits to 855 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 1366; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85437 : 106.0) no description available & (reliability: 412.0) & (original description: Putative JAL19, Description = Jacalin-related lectin 19, PFAM = PF01419)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf02174_381616-385718' '(at4g19840 : 191.0) encodes a phloem lectin, similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells.; phloem protein 2-A1 (PP2-A1); BEST Arabidopsis thaliana protein match is: phloem protein 2-A4 (TAIR:AT1G33920.1); Has 488 Blast hits to 483 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 488; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PP2A1, Description = Protein PHLOEM PROTEIN 2-LIKE A1, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf02753_56446-59531' '(at5g01090 : 194.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84552 : 169.0) no description available & (reliability: 388.0) & (original description: Putative glysoja_040215, Description = L-type lectin-domain containing receptor kinase VIII.2, PFAM = PF00139)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf03436_326771-332733' '(at1g12710 : 360.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf04113_1092691-1095322' '(at1g19715 : 102.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 204.0) & (original description: Putative , Description = Mannose-binding lectin superfamily protein, putative isoform 1, PFAM = PF01419)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf04655_426114-430583' '(at1g19715 : 154.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 83.3) no description available & (reliability: 308.0) & (original description: Putative , Description = CCA, PFAM = PF01419;PF01419)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf05017_202887-205936' '(gnl|cdd|84552 : 142.0) no description available & (at5g01090 : 122.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf05137_292193-296604' '(p17801|kpro_maize : 689.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at1g34300 : 360.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (gnl|cdd|36401 : 278.0) no description available & (gnl|cdd|84488 : 173.0) no description available & (reliability: 648.0) & (original description: Putative PK1, Description = Putative receptor protein kinase ZmPK1, PFAM = PF14295;PF00069;PF01453;PF00954)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06236_417618-421805' '(at3g61060 : 362.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 724.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF14299;PF00646)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06553_17053-22276' '(at1g19715 : 107.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 82.6) no description available & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF01419;PF01419)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06686_86742-92771' '(at1g19715 : 417.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 121.0) no description available & (reliability: 834.0) & (original description: Putative JAL3, Description = Jacalin-related lectin 3, PFAM = PF01419;PF01419;PF01419)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf07844_118799-128016' '(at3g61060 : 384.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299;PF00646)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf08508_282409-286884' '(at3g61060 : 385.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf10753_37487-42168' '(at1g12710 : 369.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf13617_12970-20080' '(at2g41890 : 654.0) curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein; FUNCTIONS IN: sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 27641 Blast hits to 27042 proteins in 566 species: Archae - 0; Bacteria - 139; Metazoa - 3969; Fungi - 187; Plants - 22616; Viruses - 64; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|36401 : 192.0) no description available & (p17801|kpro_maize : 112.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 87.9) no description available & (reliability: 1308.0) & (original description: Putative SD31, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1, PFAM = PF01453;PF00954;PF07714;PF00024)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf19932_100731-105137' '(at3g61060 : 314.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299;PF00646)' T
'26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf22134_151758-155762' '(at3g61060 : 382.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299)' T
'26.17' 'misc.dynamin' 'nbv0.3scaffold1245_23857-39664' '(at4g33650 : 1073.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 606.0) no description available & (gnl|cdd|64873 : 344.0) no description available & (reliability: 2146.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'nbv0.3scaffold31775_1-13551' '(at3g19720 : 1147.0) Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFPñARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.; ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: chloroplast fission, peroxisome fission; LOCATED IN: chloroplast outer membrane, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: Dynamin related protein 5A (TAIR:AT1G53140.1). & (gnl|cdd|35667 : 228.0) no description available & (gnl|cdd|84713 : 123.0) no description available & (reliability: 2294.0) & (original description: Putative ARC5, Description = Dynamin-like protein ARC5, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'nbv0.3scaffold68704_1-3590' '(at1g59610 : 227.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 80.0) no description available & (reliability: 454.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = )' T
'26.17' 'misc.dynamin' 'nbv0.3scaffold71071_3432-8375' '(at1g14830 : 247.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 179.0) no description available & (gnl|cdd|47402 : 160.0) no description available & (reliability: 494.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'nbv0.3scaffold71816_669-6552' '(at1g14830 : 417.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 189.0) no description available & (gnl|cdd|65951 : 88.3) no description available & (reliability: 834.0) & (original description: Putative ADL1, Description = Dynamin, PFAM = PF02212;PF01031)' T
'26.17' 'misc.dynamin' 'nbv0.5scaffold1585_150194-168884' '(at1g59610 : 1118.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 250.0) no description available & (gnl|cdd|84713 : 113.0) no description available & (reliability: 2236.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF00169;PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'nbv0.5scaffold1786_334361-375674' '(at4g33650 : 171.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|65951 : 89.5) no description available & (gnl|cdd|35667 : 83.9) no description available & (reliability: 342.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF02212)' T
'26.17' 'misc.dynamin' 'nbv0.5scaffold1786_335671-401299' '(at4g33650 : 826.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 550.0) no description available & (gnl|cdd|64873 : 305.0) no description available & (reliability: 1652.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF00350;PF01031;PF02212)' T
'26.17' 'misc.dynamin' 'nbv0.5scaffold3186_113632-130180' '(at3g60190 : 984.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 577.0) no description available & (gnl|cdd|47402 : 252.0) no description available & (reliability: 1968.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF01031;PF00350;PF02212)' T
'26.17' 'misc.dynamin' 'niben044scf00005397ctg007_1-4165' '(at1g59610 : 451.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 157.0) no description available & (gnl|cdd|84713 : 103.0) no description available & (reliability: 902.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'niben044scf00011538ctg003_255-4352' '(at1g59610 : 295.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF02212)' T
'26.17' 'misc.dynamin' 'niben044scf00056353ctg001_1479-7272' '(at3g60190 : 914.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 528.0) no description available & (gnl|cdd|47402 : 234.0) no description available & (reliability: 1828.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF02212;PF01031;PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf00062_15090-29023' '(at4g33650 : 1057.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 538.0) no description available & (gnl|cdd|64873 : 342.0) no description available & (reliability: 2114.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf00062_26613-29053' '(at2g14120 : 143.0) Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.; dynamin related protein (DRP3B); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: post-embryonic development, peroxisome fission, mitochondrial fission; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin-related protein 3A (TAIR:AT4G33650.1); Has 2998 Blast hits to 2775 proteins in 332 species: Archae - 0; Bacteria - 6; Metazoa - 1280; Fungi - 797; Plants - 522; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (gnl|cdd|35667 : 122.0) no description available & (gnl|cdd|47402 : 110.0) no description available & (reliability: 286.0) & (original description: Putative DYN1, Description = DYN1, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf00218_240160-248868' '(at3g60190 : 959.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 557.0) no description available & (gnl|cdd|47402 : 248.0) no description available & (reliability: 1918.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF01031;PF02212;PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf01006_311786-332996' '(at5g42080 : 1014.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 562.0) no description available & (gnl|cdd|64873 : 270.0) no description available & (reliability: 1990.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf01175_267246-273757' '(at1g53140 : 1147.0) Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis.; Dynamin related protein 5A (DRP5A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: cytokinesis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19720.1); Has 2347 Blast hits to 2342 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 1001; Fungi - 589; Plants - 464; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 284.0) no description available & (gnl|cdd|84713 : 120.0) no description available & (reliability: 2294.0) & (original description: Putative DRP5A, Description = Dynamin-related protein 5A, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf02057_67518-149481' '(at4g33650 : 482.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 296.0) no description available & (gnl|cdd|64873 : 267.0) no description available & (reliability: 964.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF01031;PF00350;PF02212)' T
'26.17' 'misc.dynamin' 'niben101scf02057_101992-150791' '(at4g33650 : 171.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|65951 : 89.5) no description available & (gnl|cdd|35667 : 83.9) no description available & (reliability: 342.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF02212)' T
'26.17' 'misc.dynamin' 'niben101scf02211_154773-174277' '(at1g14830 : 1031.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 578.0) no description available & (gnl|cdd|47402 : 258.0) no description available & (reliability: 2062.0) & (original description: Putative DRP1C, Description = Dynamin-related protein 1C, PFAM = PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf02240_653511-667435' '(at3g60190 : 922.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 533.0) no description available & (gnl|cdd|47402 : 218.0) no description available & (reliability: 1844.0) & (original description: Putative drp1, Description = Dynamin, PFAM = PF02212;PF01031;PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf03357_1-14256' '(at4g33650 : 1077.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 609.0) no description available & (gnl|cdd|64873 : 344.0) no description available & (reliability: 2154.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF00350;PF01031;PF02212)' T
'26.17' 'misc.dynamin' 'niben101scf04632_618840-622831' '(at1g60500 : 694.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 343.0) no description available & (gnl|cdd|47402 : 173.0) no description available & (reliability: 1388.0) & (original description: Putative Os03g0260000, Description = Dynamin family protein, putative, expressed, PFAM = PF00350;PF02212;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf06437_715204-734953' '(at1g59610 : 1166.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 273.0) no description available & (gnl|cdd|84713 : 113.0) no description available & (reliability: 2332.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF02212;PF00350;PF00169;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf07355_148202-152241' '(at1g60500 : 744.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 345.0) no description available & (gnl|cdd|47402 : 171.0) no description available & (reliability: 1488.0) & (original description: Putative DRP4C, Description = Dynamin-related protein 4C, PFAM = PF02212;PF00350;PF01031)' T
'26.17' 'misc.dynamin' 'niben101scf08364_15001-29459' '(at3g19720 : 1177.0) Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFPñARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.; ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: chloroplast fission, peroxisome fission; LOCATED IN: chloroplast outer membrane, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: Dynamin related protein 5A (TAIR:AT1G53140.1). & (gnl|cdd|35667 : 242.0) no description available & (gnl|cdd|84713 : 123.0) no description available & (reliability: 2354.0) & (original description: Putative ARC5, Description = Dynamin-like protein ARC5, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf08690_174855-189561' '(at5g42080 : 1033.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 576.0) no description available & (gnl|cdd|64873 : 268.0) no description available & (reliability: 2008.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF01031;PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf09472_299724-306731' '(at1g59610 : 497.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 167.0) no description available & (gnl|cdd|84713 : 108.0) no description available & (reliability: 994.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf09472_299861-303934' '(at1g59610 : 281.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 87.7) no description available & (reliability: 562.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = )' T
'26.17' 'misc.dynamin' 'niben101scf10476_531885-539515' '(at3g60190 : 1006.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 595.0) no description available & (gnl|cdd|47402 : 254.0) no description available & (reliability: 2012.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF02212;PF01031;PF00350)' T
'26.17' 'misc.dynamin' 'niben101scf18730_47927-66326' '(at1g10290 : 1008.0) involved in trafficking from the trans-Golgi Network to the central vacuole.; dynamin-like protein 6 (ADL6); FUNCTIONS IN: GTPase activity; INVOLVED IN: Golgi to vacuole transport; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like 3 (TAIR:AT1G59610.1); Has 3284 Blast hits to 3098 proteins in 352 species: Archae - 4; Bacteria - 126; Metazoa - 1435; Fungi - 709; Plants - 704; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (gnl|cdd|35667 : 259.0) no description available & (gnl|cdd|84713 : 108.0) no description available & (reliability: 2016.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF00350;PF02212;PF01031;PF00169)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.3scaffold50381_8994-13851' '(at4g25250 : 97.1) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 87.4) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 194.2) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.5scaffold3975_29322-31894' '(at5g62350 : 125.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 121.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 107.0) no description available & (reliability: 250.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.5scaffold6495_88382-90969' '(at1g14890 : 153.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86518 : 110.0) no description available & (p17407|21kd_dauca : 97.4) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 306.0) & (original description: Putative At1g14890, Description = Pectinesterase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben044scf00008747ctg011_13348-15941' '(at4g25250 : 113.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 103.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 88.6) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00077_232038-246637' '(at1g14890 : 117.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17407|21kd_dauca : 82.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 80.1) no description available & (reliability: 234.0) & (original description: Putative PGSC0003DMG400019123, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00148_86348-88962' '(at5g62360 : 180.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 137.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 121.0) no description available & (reliability: 360.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00148_127009-129623' '(at5g62360 : 175.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 119.0) no description available & (reliability: 350.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00494_565032-567622' '(at4g25250 : 105.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 97.8) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 86.3) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400027617, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00527_341544-344173' '(at1g62770 : 136.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 272.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00527_445591-448196' '(at4g00080 : 127.0) unfertilized embryo sac 11 (UNE11); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 574 Blast hits to 571 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 115.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 90.5) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400025965, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00618_528110-530673' '(at5g64620 : 149.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.; cell wall / vacuolar inhibitor of fructosidase 2 (C/VIF2); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: cell wall / vacuolar inhibitor of fructosidase 1 (TAIR:AT1G47960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 87.0) no description available & (reliability: 298.0) & (original description: Putative C/VIF2, Description = Cell wall / vacuolar inhibitor of fructosidase 2, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00991_606621-609903' '(at1g47960 : 105.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative INH1, Description = Invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01022_155155-157667' '(at1g47960 : 92.4) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative inhh, Description = Invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01022_202709-206799' '(at1g47960 : 107.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 87.0) no description available & (reliability: 214.0) & (original description: Putative INH1, Description = Invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01051_846261-848860' '(at5g62350 : 131.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 131.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 108.0) no description available & (reliability: 262.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02111_1765739-1769328' '(at1g47960 : 105.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 84.7) no description available & (reliability: 210.0) & (original description: Putative INH1, Description = Putative invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_12189-14785' '(at4g25250 : 116.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 103.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 89.0) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400010814, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_128282-130875' '(at4g25250 : 114.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 104.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.1) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_153673-156245' '(p17407|21kd_dauca : 190.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (at5g62350 : 182.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 126.0) no description available & (reliability: 364.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03330_137272-139865' '(at5g20740 : 176.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 847 Blast hits to 840 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 135.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 110.0) no description available & (reliability: 352.0) & (original description: Putative BnaC09g37120D, Description = BnaC09g37120D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03374_546373-548945' '(at5g62350 : 129.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 123.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 258.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03954_228748-231431' '(at1g14890 : 176.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17407|21kd_dauca : 120.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 117.0) no description available & (reliability: 352.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04217_483183-485764' '(p17407|21kd_dauca : 199.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (at5g62350 : 188.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 123.0) no description available & (reliability: 376.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04703_838558-841208' '(at1g62770 : 132.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.5) no description available & (reliability: 264.0) & (original description: Putative BnaAnng18590D, Description = BnaAnng18590D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04992_69870-72532' '(at1g14890 : 170.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86518 : 118.0) no description available & (p17407|21kd_dauca : 114.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 340.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05030_216977-219570' '(at4g25250 : 113.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 104.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 88.6) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05030_226156-228800' '(at5g62360 : 134.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 131.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 114.0) no description available & (reliability: 268.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05437_247034-249564' '(p83326|pmei_actch : 142.0) Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|86518 : 94.7) no description available & (at3g17220 : 85.5) Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates.; pectin methylesterase inhibitor 2 (PMEI2); CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT1G48020.1); Has 238 Blast hits to 232 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 238; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PMEI, Description = Pectinesterase inhibitor, PFAM = PF04043;PF12755)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf07639_582541-585107' '(at5g46970 : 94.7) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G46930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 92.0) no description available & (reliability: 189.4) & (original description: Putative InvI1, Description = Invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf07850_510312-512995' '(at2g01610 : 177.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 850; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 129.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 123.0) no description available & (reliability: 354.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf09284_168187-170777' '(at5g38610 : 102.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G46940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 80.9) no description available & (reliability: 204.0) & (original description: Putative PGSC0003DMG400001844, Description = Putative invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10232_395999-398358' '(at1g47960 : 89.4) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative INH1, Description = Putative invertase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10354_36455-39039' '(at3g62820 : 156.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47670.1); Has 816 Blast hits to 809 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 816; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 110.0) no description available & (p17407|21kd_dauca : 87.8) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 312.0) & (original description: Putative BnaC08g32510D, Description = BnaC08g32510D protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10810_182080-184670' '(at5g20740 : 174.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 847 Blast hits to 840 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 139.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 113.0) no description available & (reliability: 348.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf11361_173304-175939' '(at1g62770 : 127.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 124.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.5) no description available & (reliability: 254.0) & (original description: Putative grip28, Description = Putative pectin methylesterase inhibitor, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf11361_219095-221712' '(at4g25260 : 141.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: shade avoidance; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 774 Blast hits to 767 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 774; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 139.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 282.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T
'26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf18293_9039-11776' '(at1g62770 : 164.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 150.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 126.0) no description available & (reliability: 328.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold880_59014-63809' '(at5g07475 : 99.8) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 91.5) no description available & (reliability: 199.6) & (original description: Putative PGSC0003DMG400003448, Description = Cupredoxin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold1895_58341-61352' '(at5g15350 : 105.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 91.5) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold6735_34217-36936' '(gnl|cdd|66026 : 106.0) no description available & (p29602|cpc_cucsa : 101.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (at5g20230 : 90.5) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative CitBC, Description = Stellacyanin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold12261_20519-24200' '(gnl|cdd|66026 : 92.3) no description available & (at2g25060 : 84.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400030919, Description = Copper binding protein 5, putative, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold20702_9693-14094' '(at5g26330 : 95.1) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 82.7) no description available & (reliability: 190.2) & (original description: Putative BCP7, Description = Copper binding protein 7, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold26934_25093-27340' '(at3g20570 : 145.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 88.8) no description available & (reliability: 290.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold36856_1-3160' '(at3g60280 : 105.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 98.8) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 210.0) & (original description: Putative UCC2, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold37441_4261-7193' '(at1g48940 : 141.0) early nodulin-like protein 6 (ENODL6); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1289 Blast hits to 1246 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 95.4) no description available & (p93328|no16_medtr : 82.4) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (reliability: 282.0) & (original description: Putative ntepb1, Description = Phosphoprotein NtEPb1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold38407_10239-13771' '(at2g27035 : 145.0) Has been classified as a stellacyanin. Has also been classified as an early nodulin-like protein (ENODL), because it does not have a His residue involved in Cu binding. ENODLs are proteins having one plastocyanin-like (PCNL) domain lacking the amino acid residues necessary for Cu binding.; early nodulin-like protein 20 (ENODL20); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 17 (TAIR:AT5G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative ENODL20, Description = Early nodulin-like protein 20, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold45187_13257-17089' '(at4g28365 : 125.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (gnl|cdd|35481 : 81.9) no description available & (reliability: 250.0) & (original description: Putative CT099, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold47740_6973-10440' '(at4g28365 : 126.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 93.1) no description available & (reliability: 252.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold80204_2034-5566' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 99.2) no description available & (reliability: 260.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold84305_846-5102' '(gnl|cdd|66026 : 101.0) no description available & (at5g20230 : 95.9) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 89.7) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 191.8) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold85959_1-2803' '(at3g18590 : 154.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 308.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold98369_1-4239' '(at1g08500 : 99.8) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative TCM_005471, Description = Early nodulin-like protein 18 isoform 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold37_834414-839619' '(at4g32490 : 124.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 98.8) no description available & (reliability: 248.0) & (original description: Putative BnaC09g30230D, Description = BnaC09g30230D protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold411_754421-771963' '(at4g31840 : 152.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p93328|no16_medtr : 106.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 304.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold2405_209046-213064' '(at4g28365 : 122.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 244.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold6548_16934-20798' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.7) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 93.6) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 189.4) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold8879_27014-29387' '(at2g25060 : 103.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00001451ctg020_2743-6171' '(at4g31840 : 153.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p93328|no16_medtr : 106.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 306.0) & (original description: Putative At2g25060, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00003019ctg000_1-2798' '(at1g64640 : 145.0) early nodulin-like protein 8 (ENODL8); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 1336 Blast hits to 1294 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1335; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 90.8) no description available & (reliability: 290.0) & (original description: Putative ENODL8, Description = At1g64640, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00004121ctg005_5222-7850' '(at5g26330 : 110.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 104.0) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 220.0) & (original description: Putative PGSC0003DMG400045671, Description = , PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00005302ctg002_1380-4359' '(gnl|cdd|66026 : 102.0) no description available & (at5g20230 : 99.4) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 93.2) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 198.8) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00005302ctg015_9255-12922' '(gnl|cdd|66026 : 90.8) no description available & (at2g25060 : 85.1) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400030919, Description = Cupredoxin superfamily protein, putative isoform 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00016026ctg005_8234-11734' '(at5g26330 : 132.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 121.0) no description available & (q41001|bcp_pea : 97.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 264.0) & (original description: Putative BCP1, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00021994ctg002_54459-57322' '(at5g26330 : 105.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (p00303|babl_cucsa : 89.4) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (reliability: 210.0) & (original description: Putative PGSC0003DMG400038171, Description = Mavicyanin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00032820ctg017_1-15733' '(at5g26330 : 134.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 115.0) no description available & (p60496|babl_lillo : 91.7) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (reliability: 268.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00034675ctg009_1-1773' '(p60496|babl_lillo : 94.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 93.2) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 86.1) no description available & (reliability: 186.4) & (original description: Putative PGSC0003DMG400039863, Description = Plantacyanin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00048291ctg000_1-2305' '(at3g18590 : 155.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 310.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00050087ctg005_301-3745' '(at3g27200 : 148.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (q41001|bcp_pea : 92.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 296.0) & (original description: Putative BnaC02g36760D, Description = BnaC02g36760D protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00059034ctg002_316-3571' '(at3g60280 : 103.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 98.5) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 206.0) & (original description: Putative UCC2, Description = Cupredoxin superfamily protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben044scf00059651ctg000_1-27215' '(at3g20570 : 138.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 89.6) no description available & (reliability: 276.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101ctg06624_1-725' '(p60496|babl_lillo : 115.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 100.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 94.2) no description available & (reliability: 200.0) & (original description: Putative babl, Description = Basic blue protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf00046_746365-767069' '(at1g48940 : 141.0) early nodulin-like protein 6 (ENODL6); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1289 Blast hits to 1246 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 95.8) no description available & (p93329|no20_medtr : 82.4) Early nodulin 20 precursor (N-20) - Medicago truncatula (Barrel medic) & (reliability: 282.0) & (original description: Putative ntepb1, Description = Phosphoprotein NtEPb1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf00347_17583-21786' '(at4g32490 : 122.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 83.0) no description available & (reliability: 244.0) & (original description: Putative glysoja_040307, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf00426_144788-149315' '(gnl|cdd|66026 : 84.2) no description available & (at3g27200 : 84.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative BCP2, Description = Copper binding protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf00873_126377-165379' '(at4g28365 : 129.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 85.4) no description available & (reliability: 258.0) & (original description: Putative ENODL3, Description = Early nodulin-like protein 3, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf01036_867815-871892' '(at4g27520 : 130.0) early nodulin-like protein 2 (ENODL2); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 1 (TAIR:AT5G53870.1); Has 168805 Blast hits to 80761 proteins in 2510 species: Archae - 213; Bacteria - 30974; Metazoa - 63826; Fungi - 28998; Plants - 14037; Viruses - 3902; Other Eukaryotes - 26855 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (p93328|no16_medtr : 82.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|35481 : 81.6) no description available & (reliability: 260.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf01175_42842-48599' '(at4g32490 : 126.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 98.5) no description available & (reliability: 252.0) & (original description: Putative BnaC09g30230D, Description = BnaC09g30230D protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf01706_72029-74738' '(at1g64640 : 140.0) early nodulin-like protein 8 (ENODL8); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 1336 Blast hits to 1294 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1335; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 88.1) no description available & (reliability: 280.0) & (original description: Putative ENODL8, Description = At1g64640, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02021_640197-657433' '(at5g26330 : 138.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 119.0) no description available & (q41001|bcp_pea : 103.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 276.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02124_215066-217644' '(at5g15350 : 103.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 89.2) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02407_959599-963924' '(at3g60280 : 106.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 100.0) no description available & (q41001|bcp_pea : 98.2) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 212.0) & (original description: Putative UCC2, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02562_29396-31770' '(at2g25060 : 104.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66026 : 80.4) no description available & (reliability: 208.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02819_35790-48241' '(p29602|cpc_cucsa : 107.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (gnl|cdd|66026 : 105.0) no description available & (at5g20230 : 87.8) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative CitBC, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02838_850162-854026' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 88.6) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 188.0) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf02995_46808-57262' '(at3g27200 : 85.5) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 82.7) no description available & (reliability: 171.0) & (original description: Putative BCP9, Description = Copper binding protein 9, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf03044_22792-25029' '(at3g20570 : 140.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 95.0) no description available & (reliability: 280.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf03224_495443-498550' '(at5g15350 : 94.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 88.1) no description available & (reliability: 188.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf03446_1083231-1261080' '(at4g31840 : 161.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 106.0) no description available & (q02917|no552_soybn : 103.0) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315) - Glycine max (Soybean) & (reliability: 322.0) & (original description: Putative At2g25060, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf03600_19052-22088' '(at3g27200 : 150.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (q41001|bcp_pea : 92.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 300.0) & (original description: Putative BnaC02g36760D, Description = BnaC02g36760D protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf03930_1-3720' '(p29602|cpc_cucsa : 104.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (gnl|cdd|66026 : 102.0) no description available & (at5g20230 : 90.1) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative CitBC, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf04104_82275-87579' '(gnl|cdd|66026 : 87.7) no description available & (at5g07475 : 84.3) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400003448, Description = Uclacyanin 3, putative, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf04444_812658-815913' '(at1g79800 : 130.0) early nodulin-like protein 7 (ENODL7); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1368 Blast hits to 1323 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 90.4) no description available & (reliability: 260.0) & (original description: Putative ENODL5, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf04551_179452-182080' '(at5g26330 : 82.4) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400038171, Description = , PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf04989_337109-340641' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (reliability: 260.0) & (original description: Putative At4g27520, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf05158_173193-176357' '(at3g18590 : 155.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 94.2) no description available & (reliability: 310.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf05559_124381-127158' '(at5g26330 : 132.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 111.0) no description available & (q41001|bcp_pea : 94.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 264.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf05601_86258-91575' '(at5g26330 : 172.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 128.0) no description available & (q41001|bcp_pea : 98.2) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 344.0) & (original description: Putative BCP7, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf05824_733132-742326' '(at4g31840 : 152.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q02917|no552_soybn : 108.0) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315) - Glycine max (Soybean) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 304.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf06026_171777-176068' '(at5g15350 : 157.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 89.6) no description available & (reliability: 314.0) & (original description: Putative At5g15350, Description = Lamin-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf06094_193699-196824' '(gnl|cdd|66026 : 104.0) no description available & (at2g32300 : 102.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (q41001|bcp_pea : 85.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 193.4) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf06633_197000-201768' '(at4g28365 : 122.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (reliability: 244.0) & (original description: Putative CEL, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf07227_171986-175062' '(at5g07475 : 137.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 93.4) no description available & (q41001|bcp_pea : 92.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 274.0) & (original description: Putative At5g07475, Description = At5g07475, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf07438_464184-473191' '(gnl|cdd|66026 : 102.0) no description available & (at1g45063 : 96.3) copper ion binding;electron carriers; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: plastocyanin-like domain-containing protein (TAIR:AT3G53330.1); Has 2601 Blast hits to 1373 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2600; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p00303|babl_cucsa : 81.3) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (reliability: 183.4) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf07578_41192-44203' '(q41001|bcp_pea : 134.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (at1g72230 : 115.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G22480.1); Has 1425 Blast hits to 1386 proteins in 65 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 97.7) no description available & (reliability: 230.0) & (original description: Putative BnaA07g29960D, Description = BnaA07g29960D protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09149_121911-125942' '(p00303|babl_cucsa : 137.0) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (at2g02850 : 128.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 105.0) no description available & (reliability: 256.0) & (original description: Putative babl, Description = Basic blue protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09149_167767-170222' '(at2g02850 : 95.9) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p60496|babl_lillo : 94.4) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|66026 : 92.3) no description available & (reliability: 191.8) & (original description: Putative PGSC0003DMG400039863, Description = Basic blue protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09149_188811-191343' '(p60496|babl_lillo : 110.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 108.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 93.8) no description available & (reliability: 216.0) & (original description: Putative ARPN, Description = Basic blue protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09363_32699-35571' '(at1g79800 : 132.0) early nodulin-like protein 7 (ENODL7); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1368 Blast hits to 1323 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 85.7) no description available & (reliability: 264.0) & (original description: Putative A26, Description = NtEPc-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09751_190475-194239' '(at5g26330 : 127.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (reliability: 254.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf09928_486-2669' '(at5g15350 : 103.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 86.1) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf10259_59016-79193' '(at1g08500 : 99.4) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative TCM_005471, Description = Early nodulin-like protein 18 isoform 1, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf10688_132868-139769' '(gnl|cdd|66026 : 120.0) no description available & (at5g20230 : 99.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 94.7) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 198.0) & (original description: Putative BCP5, Description = Blue copper protein, PFAM = PF02298;PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf10688_227984-231699' '(gnl|cdd|66026 : 106.0) no description available & (at5g20230 : 102.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 96.3) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 204.0) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf11424_267702-273284' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 85.7) no description available & (reliability: 260.0) & (original description: Putative ENODL1, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf11684_292668-299419' '(at1g08500 : 213.0) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative T27G7.18, Description = Early nodulin-like protein 18, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf11724_392737-395801' '(at3g20570 : 137.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 95.4) no description available & (reliability: 274.0) & (original description: Putative ENODL1, Description = Early nodulin-like protein 2, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf11774_194552-197563' '(at3g20570 : 132.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 89.2) no description available & (reliability: 264.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf14172_1-2292' '(at5g26330 : 102.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 101.0) no description available & (q41001|bcp_pea : 85.1) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 204.0) & (original description: Putative PGSC0003DMG400045450, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T
'26.19' 'misc.plastocyanin-like' 'niben101scf16738_68802-72361' '(at5g26330 : 135.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (p60496|babl_lillo : 88.2) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (reliability: 270.0) & (original description: Putative BCP7, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T
'26.20' 'misc.ferredoxin-like' '' ''
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold3125_46475-49141' '(at5g62065 : 107.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold5155_1811-5404' '(at2g48140 : 91.3) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 182.6) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold10989_5256-10168' '(at2g48140 : 87.4) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 174.8) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold10989_29556-32641' '(at2g48140 : 86.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 173.4) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold30836_3497-5896' '(gnl|cdd|72939 : 95.0) no description available & (at4g33355 : 89.7) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 89.4) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 179.4) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold48364_10627-14450' '(at5g64080 : 114.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaC02g42910D, Description = BnaC02g42910D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold49756_2180-5154' '(gnl|cdd|72937 : 96.9) no description available & (at3g22120 : 96.7) cell wall-plasma membrane linker protein homolog (CWLP); cell wall-plasma membrane linker protein (CWLP); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 335678 Blast hits to 95375 proteins in 3349 species: Archae - 1485; Bacteria - 89074; Metazoa - 114820; Fungi - 40290; Plants - 34776; Viruses - 9272; Other Eukaryotes - 45961 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PRP1, Description = PRP1, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold87323_2584-5615' '(at1g05450 : 90.9) Encodes a Protease inhibitor/seed storage/LTP family protein; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative At1g05450, Description = Protease inhibitor, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold96401_666-3887' '(at4g14815 : 108.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400020131, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold113_144341-148644' '(at5g13900 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400020710, Description = Non-specific lipid-transfer protein, putative, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold744_479817-482098' '(gnl|cdd|72938 : 89.5) no description available & (at3g18280 : 85.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q43681|nltp_vigun : 81.6) Probable nonspecific lipid-transfer protein AKCS9 precursor (LTP) - Vigna unguiculata (Cowpea) & (reliability: 171.0) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold1158_411375-417191' '(at2g45180 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 100.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 96.5) no description available & (reliability: 220.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold1467_110842-112703' '(at5g48490 : 83.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G48485.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative LBP, Description = Lipid binding/ Lipid transporter protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold2633_76958-79428' '(gnl|cdd|72937 : 91.5) no description available & (at4g12490 : 80.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12500.1); Has 18352 Blast hits to 7356 proteins in 861 species: Archae - 114; Bacteria - 4375; Metazoa - 2713; Fungi - 1220; Plants - 5360; Viruses - 1445; Other Eukaryotes - 3125 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold2682_141315-143225' '(gnl|cdd|72937 : 87.3) no description available & (p14009|14kd_dauca : 82.8) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (at4g12510 : 82.4) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative extA, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold4274_5935-8474' '(gnl|cdd|72939 : 101.0) no description available & (at4g33355 : 92.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 92.4) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 184.8) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold10111_1061-4907' '(at3g22620 : 90.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 884 Blast hits to 840 proteins in 101 species: Archae - 0; Bacteria - 84; Metazoa - 49; Fungi - 31; Plants - 622; Viruses - 18; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400032260, Description = Alpha-amylase inhibitor, lipid transfer and seed storage protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00001792ctg006_1-2362' '(at2g37870 : 97.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G05960.1); Has 479 Blast hits to 479 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative Sb03g039880, Description = Putative uncharacterized protein Sb03g039880, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00002528ctg003_1-2807' '(at2g48140 : 88.2) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 176.4) & (original description: Putative EDA4, Description = At2g48140/F11L15.4, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00011950ctg000_6314-11226' '(at2g48140 : 86.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 173.4) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00013910ctg003_174-3383' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative MTR_3g083760, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00014460ctg002_8974-18178' '(at3g43720 : 91.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative KK1_038798, Description = Xylogen-like protein 11, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00025094ctg003_3834-6278' '(gnl|cdd|72939 : 101.0) no description available & (p10973|nltpa_ricco : 92.8) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 92.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00027063ctg002_11223-13618' '(at3g43720 : 80.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative XYP5, Description = Non-specific lipid-transfer protein-like protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00028792ctg003_1331-4485' '(at3g22600 : 108.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00034811ctg010_37701-41543' '(at2g48140 : 86.3) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 172.6) & (original description: Putative At1g05450, Description = Protease inhibitor, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00043634ctg001_5350-12318' '(at3g22600 : 93.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00055590ctg004_1-1624' '(at2g48140 : 91.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 183.4) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00304_503293-541155' '(at3g43720 : 91.7) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative Os01g0814100, Description = Os01g0814100 protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00491_286889-289646' '(at1g73890 : 92.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G55260.2); Has 645 Blast hits to 641 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400005630, Description = BnaC05g14110D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00528_134635-137457' '(at3g07450 : 111.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G52130.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaA05g30180D, Description = BnaA05g30180D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00728_112260-114736' '(at3g63095 : 82.4) Encodes a Protease inhibitor/seed storage/LTP family protein; Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative TCM_004435, Description = Tetratricopeptide repeat-like superfamily protein, putative, PFAM = )' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00925_127681-130073' '(gnl|cdd|72937 : 96.1) no description available & (at2g45180 : 89.4) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 85.1) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (reliability: 178.8) & (original description: Putative AIR1, Description = Putative lipid-binding protein AIR1, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01051_880440-888624' '(at1g62790 : 88.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 314 Blast hits to 310 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400004782, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_292732-295271' '(gnl|cdd|72939 : 99.6) no description available & (at4g33355 : 92.8) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 90.1) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 185.6) & (original description: Putative PGSC0003DMG400025987, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_296022-298439' '(gnl|cdd|72939 : 95.4) no description available & (at4g33355 : 94.7) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 92.0) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 189.4) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_298338-335274' '(gnl|cdd|72939 : 95.4) no description available & (p10973|nltpa_ricco : 88.6) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 87.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative LTP, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01326_508606-511381' '(gnl|cdd|72939 : 89.2) no description available & (p10974|nltpb_ricco : 87.4) Nonspecific lipid-transfer protein B (NS-LTP B) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 82.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein 3, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01569_111888-117588' '(gnl|cdd|72939 : 98.1) no description available & (at4g33355 : 89.0) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10974|nltpb_ricco : 87.4) Nonspecific lipid-transfer protein B (NS-LTP B) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 178.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01972_184724-187636' '(at3g22600 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At1g03103, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02006_160160-163973' '(at2g44300 : 153.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02102_172783-175193' '(at1g12100 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p14009|14kd_dauca : 107.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 94.6) no description available & (reliability: 220.0) & (original description: Putative ltp2, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02286_84180-86542' '(at2g37870 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G05960.1); Has 479 Blast hits to 479 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative BnaC04g45500D, Description = BnaC04g45500D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02335_309364-388534' '(at5g64080 : 104.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative LTP1, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02513_904534-908800' '(at5g64080 : 116.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At5g64080, Description = Non-specific lipid-transfer protein-like protein At5g64080, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02538_117986-120267' '(gnl|cdd|72938 : 91.5) no description available & (at3g18280 : 88.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q43681|nltp_vigun : 82.0) Probable nonspecific lipid-transfer protein AKCS9 precursor (LTP) - Vigna unguiculata (Cowpea) & (reliability: 176.4) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02831_147691-149604' '(at5g48490 : 85.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G48485.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative LBP, Description = Lipid binding/ Lipid transporter protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03101_10910-14287' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative Os07g0198300, Description = Lipid binding protein, putative, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03293_41250-44093' '(at2g44300 : 127.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative AtXYP10, Description = Lipid binding protein, putative, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03337_365573-367968' '(at4g00165 : 114.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 99.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 93.1) no description available & (reliability: 228.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, putative, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03374_576423-579531' '(at1g62790 : 81.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 314 Blast hits to 310 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400012481, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03573_1-3714' '(at3g22620 : 88.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 884 Blast hits to 840 proteins in 101 species: Archae - 0; Bacteria - 84; Metazoa - 49; Fungi - 31; Plants - 622; Viruses - 18; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04096_1173594-1176260' '(at5g62065 : 106.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04096_1173793-1175918' '(at5g62065 : 106.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04283_205597-208073' '(at3g63095 : 80.5) Encodes a Protease inhibitor/seed storage/LTP family protein; Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative MTR_1g032050, Description = AAA ATPase containing von Willebrand factor type A, PFAM = )' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04556_448226-451482' '(at2g44300 : 176.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative YLS3, Description = Protein YLS3, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04714_69760-72155' '(at4g00165 : 112.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 95.9) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 93.1) no description available & (reliability: 224.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, putative, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05078_840691-846099' '(at3g43720 : 99.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative pco081246, Description = Non-specific lipid-transfer protein-like protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05094_113859-116235' '(at5g05960 : 134.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G53980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At5g05960, Description = At5g05960, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05631_145750-148040' '(gnl|cdd|72938 : 86.5) no description available & (at3g18280 : 82.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative LTP, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05855_134209-136653' '(gnl|cdd|72939 : 103.0) no description available & (at4g33355 : 97.1) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 91.7) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 194.2) & (original description: Putative BnaA02g07110D, Description = Non-specific lipid-transfer protein A, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06205_141270-148378' '(at4g14815 : 94.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06650_259848-263238' '(at3g22600 : 105.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative Os07g0174400, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06819_44455-51343' '(at3g22600 : 85.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative AtXYP7, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06819_61709-64930' '(at3g22600 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative AtXYP8, Description = Lipid transfer protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf07072_7914-10195' '(gnl|cdd|72938 : 89.2) no description available & (at1g48750 : 86.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G18280.1); Has 285 Blast hits to 284 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf07400_50626-53435' '(at5g13900 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400020710, Description = BnaA02g01920D protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf08679_211150-214988' '(at2g44300 : 156.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf09028_32679-36225' '(at1g18280 : 91.7) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G73560.1); Has 517 Blast hits to 515 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 0; Plants - 507; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400005678, Description = At1g18280, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf09547_333523-337091' '(at2g48140 : 87.0) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 174.0) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf10409_238489-240875' '(gnl|cdd|72937 : 91.9) no description available & (at2g45180 : 91.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 88.6) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (reliability: 182.6) & (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf11497_378748-383561' '(at2g44300 : 133.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative YLS3, Description = Putative GPI-anchored protein At1g27950 family, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf11609_7818-12730' '(at2g48140 : 84.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400032260, Description = Lipid binding protein, putative, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13203_1295-4015' '(gnl|cdd|72939 : 99.6) no description available & (p27631|nltp_dauca : 95.1) Nonspecific lipid-transfer protein precursor (LTP) (Extracellular protein 2) - Daucus carota (Carrot) & (at3g08770 : 88.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 161.8) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13429_191103-193513' '(at1g12100 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p14009|14kd_dauca : 107.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 95.0) no description available & (reliability: 220.0) & (original description: Putative extA, Description = Lipid transfer protein, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13429_350669-353681' '(gnl|cdd|72937 : 92.7) no description available & (p14009|14kd_dauca : 89.7) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (at2g45180 : 87.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13920_24606-27760' '(at3g22600 : 105.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf14098_50878-53705' '(at2g10940 : 115.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane, apoplast, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 46369 Blast hits to 18572 proteins in 1334 species: Archae - 186; Bacteria - 10981; Metazoa - 15875; Fungi - 3500; Plants - 7556; Viruses - 1597; Other Eukaryotes - 6674 (source: NCBI BLink). & (gnl|cdd|72937 : 83.4) no description available & (reliability: 230.0) & (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf26575_1-2289' '(at1g05450 : 85.1) Encodes a Protease inhibitor/seed storage/LTP family protein; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf26575_5288-7940' '(at3g22600 : 97.1) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative LOC100283521, Description = Putative non-specific lipid-transfer protein-like protein-like, PFAM = PF14368)' T
'26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf37163_2069-6074' '(at5g13900 : 100.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400020710, Description = BnaA02g01920D protein, PFAM = PF14368)' T
'26.21.1' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein.protease inhibitor' '' ''
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold2148_76913-85828' '(at5g10050 : 375.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (gnl|cdd|36423 : 278.0) no description available & (gnl|cdd|75413 : 166.0) no description available & (reliability: 750.0) & (original description: Putative BnaA03g02760D, Description = BnaA03g02760D protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold2733_5568-12360' '(at4g23420 : 380.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 325.0) no description available & (gnl|cdd|81882 : 244.0) no description available & (reliability: 760.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold9637_36003-40984' '(at4g23430 : 193.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 162.0) no description available & (gnl|cdd|81881 : 121.0) no description available & (reliability: 386.0) & (original description: Putative HP32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = )' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold18138_26048-31375' '(at5g50700 : 417.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 274.0) no description available & (gnl|cdd|81873 : 219.0) no description available & (q5kts5|grdh_dauca : 82.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 834.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold18471_3823-10268' '(at5g50130 : 446.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36422 : 301.0) no description available & (gnl|cdd|81881 : 172.0) no description available & (reliability: 892.0) & (original description: Putative HP32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold27989_20052-22826' '(at3g03980 : 280.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 233.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 212.0) no description available & (gnl|cdd|35944 : 186.0) no description available & (reliability: 560.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold41002_1709-7267' '(at5g02540 : 333.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 272.0) no description available & (gnl|cdd|81881 : 207.0) no description available & (q01289|por_pea : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 666.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold68696_1-9616' '(at4g09750 : 476.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 209.0) no description available & (gnl|cdd|81881 : 110.0) no description available & (reliability: 952.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold85530_1-5311' '(at4g10020 : 395.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 159.0) no description available & (gnl|cdd|81873 : 99.6) no description available & (reliability: 790.0) & (original description: Putative HSD5, Description = Hydroxysteroid 11-beta-dehydrogenase 1-like protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold88628_1169-5580' '(at4g20760 : 222.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (gnl|cdd|36824 : 124.0) no description available & (gnl|cdd|82770 : 86.5) no description available & (reliability: 444.0) & (original description: Putative Sb08g020890, Description = Putative uncharacterized protein Sb08g020890, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold3692_139905-143344' '(at1g52340 : 233.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 211.0) no description available & (gnl|cdd|75407 : 196.0) no description available & (p50160|ts2_maize : 186.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 420.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold4811_57629-75040' '(at5g04900 : 394.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 150.0) no description available & (gnl|cdd|30648 : 133.0) no description available & (reliability: 788.0) & (original description: Putative NOL, Description = Chlorophyll b reductase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5545_120222-125295' '(at4g09750 : 506.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 232.0) no description available & (gnl|cdd|81881 : 126.0) no description available & (reliability: 1012.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5671_5166-10516' '(at3g61220 : 382.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 172.0) no description available & (gnl|cdd|81632 : 114.0) no description available & (reliability: 764.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5671_5473-9329' '(at3g61220 : 137.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (reliability: 274.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold8915_12182-16045' '(at3g61220 : 384.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 182.0) no description available & (gnl|cdd|81632 : 121.0) no description available & (reliability: 768.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00001966ctg000_4057-14834' '(at3g61220 : 313.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 174.0) no description available & (gnl|cdd|81625 : 161.0) no description available & (q9tl22|rk14_nepol : 112.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 626.0) & (original description: Putative rplN, Description = 50S ribosomal protein L14, PFAM = PF00238;PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00001966ctg000_14338-16731' '(at3g61220 : 155.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 108.0) no description available & (gnl|cdd|81882 : 80.4) no description available & (reliability: 310.0) & (original description: Putative cbr1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00003492ctg000_140-4863' '(at2g24190 : 283.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G61220.2); Has 72615 Blast hits to 72550 proteins in 3183 species: Archae - 711; Bacteria - 48651; Metazoa - 4595; Fungi - 3717; Plants - 2402; Viruses - 0; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|36422 : 152.0) no description available & (gnl|cdd|81632 : 99.4) no description available & (reliability: 566.0) & (original description: Putative SDR2b, Description = Short-chain dehydrogenase/reductase 2b, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00010186ctg007_13856-16945' '(at4g23420 : 159.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 115.0) no description available & (gnl|cdd|81882 : 99.2) no description available & (reliability: 318.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00011954ctg011_1-4604' '(at3g55290 : 332.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 196.0) no description available & (gnl|cdd|84317 : 184.0) no description available & (q93x67|fabg2_brana : 102.0) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) - Brassica napus (Rape) & (reliability: 664.0) & (original description: Putative BnaA02g04430D, Description = BnaA02g04430D protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00013648ctg004_63449-67921' '(at5g04900 : 179.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative NOL, Description = Chlorophyll(Ide) b reductase NOL, chloroplastic, PFAM = )' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00013789ctg020_1323-4664' '(at3g03980 : 309.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 255.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 227.0) no description available & (gnl|cdd|35944 : 201.0) no description available & (reliability: 618.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00016456ctg006_7707-10065' '(at4g05530 : 180.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82354 : 128.0) no description available & (gnl|cdd|35944 : 126.0) no description available & (reliability: 360.0) & (original description: Putative dhrs4, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00019410ctg004_1664-8676' '(at5g04070 : 321.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15940.1); Has 38503 Blast hits to 38471 proteins in 2813 species: Archae - 360; Bacteria - 23739; Metazoa - 3799; Fungi - 2489; Plants - 1519; Viruses - 0; Other Eukaryotes - 6597 (source: NCBI BLink). & (gnl|cdd|36422 : 190.0) no description available & (gnl|cdd|81882 : 141.0) no description available & (reliability: 642.0) & (original description: Putative At5g04070, Description = At5g04070, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00021802ctg003_11296-16444' '(at3g61220 : 328.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 179.0) no description available & (gnl|cdd|31231 : 117.0) no description available & (reliability: 656.0) & (original description: Putative SDR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00037009ctg000_28701-33124' '(at3g51680 : 371.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 340.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|75407 : 189.0) no description available & (reliability: 742.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00053668ctg002_1261-15184' '(at3g61220 : 124.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 106.0) no description available & (gnl|cdd|81632 : 80.6) no description available & (reliability: 248.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00247_422848-462458' '(at4g03140 : 335.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115095 Blast hits to 114901 proteins in 3526 species: Archae - 967; Bacteria - 76065; Metazoa - 4961; Fungi - 5951; Plants - 2443; Viruses - 5; Other Eukaryotes - 24703 (source: NCBI BLink). & (gnl|cdd|82237 : 192.0) no description available & (gnl|cdd|35944 : 191.0) no description available & (p50160|ts2_maize : 190.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 670.0) & (original description: Putative SDR3a, Description = Short-chain dehydrogenase reductase 3a, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00247_457815-462664' '(at4g03140 : 334.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115095 Blast hits to 114901 proteins in 3526 species: Archae - 967; Bacteria - 76065; Metazoa - 4961; Fungi - 5951; Plants - 2443; Viruses - 5; Other Eukaryotes - 24703 (source: NCBI BLink). & (gnl|cdd|35944 : 192.0) no description available & (gnl|cdd|82237 : 192.0) no description available & (p50160|ts2_maize : 190.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 668.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00388_289088-301491' '(at5g10050 : 200.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (gnl|cdd|36423 : 199.0) no description available & (gnl|cdd|81874 : 186.0) no description available & (reliability: 400.0) & (original description: Putative BnaC03g04080D, Description = BnaC03g04080D protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00419_856712-859299' '(at3g55310 : 177.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, fatty acid elongation, unsaturated fatty acid, metabolic process, fatty acid elongation, saturated fatty acid; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 128636 Blast hits to 128424 proteins in 3690 species: Archae - 1019; Bacteria - 82614; Metazoa - 6888; Fungi - 6972; Plants - 3216; Viruses - 5; Other Eukaryotes - 27922 (source: NCBI BLink). & (gnl|cdd|35944 : 102.0) no description available & (gnl|cdd|31231 : 97.6) no description available & (reliability: 354.0) & (original description: Putative KK1_003437, Description = Putative oxidoreductase Lmo0432 family, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00448_2256423-2260413' '(at5g50700 : 350.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 235.0) no description available & (gnl|cdd|81873 : 190.0) no description available & (reliability: 700.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_208251-216432' '(at4g11410 : 414.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2); Has 42058 Blast hits to 41993 proteins in 2806 species: Archae - 320; Bacteria - 26803; Metazoa - 3444; Fungi - 2870; Plants - 1627; Viruses - 0; Other Eukaryotes - 6994 (source: NCBI BLink). & (gnl|cdd|36422 : 329.0) no description available & (gnl|cdd|81881 : 236.0) no description available & (q01289|por_pea : 110.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 828.0) & (original description: Putative rdh13, Description = Retinol dehydrogenase 13, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_264804-271596' '(at4g23420 : 379.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 325.0) no description available & (gnl|cdd|81882 : 243.0) no description available & (reliability: 758.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_265224-271467' '(at4g23420 : 317.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 267.0) no description available & (gnl|cdd|81882 : 216.0) no description available & (reliability: 634.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00684_7727-13737' '(at5g02540 : 415.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 328.0) no description available & (gnl|cdd|81881 : 241.0) no description available & (q01289|por_pea : 86.3) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 830.0) & (original description: Putative Rdh11, Description = Retinol dehydrogenase 11, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00713_306959-320015' '(at5g02540 : 409.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 332.0) no description available & (gnl|cdd|81881 : 232.0) no description available & (q01289|por_pea : 94.7) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 818.0) & (original description: Putative RDH14, Description = Retinol dehydrogenase 14, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00915_282866-288756' '(at5g50700 : 296.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 231.0) no description available & (gnl|cdd|81873 : 189.0) no description available & (q5kts5|grdh_dauca : 91.7) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 592.0) & (original description: Putative HSD1, Description = Hydroxysteroid 11-beta-dehydrogenase 1-like protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01403_173497-179722' '(at5g51030 : 455.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 206.0) no description available & (gnl|cdd|31231 : 115.0) no description available & (reliability: 910.0) & (original description: Putative glysoja_034657, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01440_257879-261040' '(at1g52340 : 237.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 211.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 201.0) no description available & (gnl|cdd|82237 : 187.0) no description available & (reliability: 470.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01814_164814-169353' '(at3g50560 : 348.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink). & (gnl|cdd|36232 : 191.0) no description available & (gnl|cdd|30648 : 101.0) no description available & (reliability: 696.0) & (original description: Putative Sb07g023170, Description = Putative uncharacterized protein Sb07g023170, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_437708-443919' '(at2g37540 : 376.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: pollen tube growth; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02540.1); Has 68340 Blast hits to 68248 proteins in 3185 species: Archae - 570; Bacteria - 45342; Metazoa - 4477; Fungi - 4309; Plants - 2410; Viruses - 0; Other Eukaryotes - 11232 (source: NCBI BLink). & (gnl|cdd|36422 : 306.0) no description available & (gnl|cdd|81882 : 212.0) no description available & (q01289|por_pea : 90.1) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 752.0) & (original description: Putative wwox, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_438064-443992' '(at2g37540 : 414.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: pollen tube growth; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02540.1); Has 68340 Blast hits to 68248 proteins in 3185 species: Archae - 570; Bacteria - 45342; Metazoa - 4477; Fungi - 4309; Plants - 2410; Viruses - 0; Other Eukaryotes - 11232 (source: NCBI BLink). & (gnl|cdd|36422 : 330.0) no description available & (gnl|cdd|81881 : 224.0) no description available & (q01289|por_pea : 89.7) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 828.0) & (original description: Putative RDH13, Description = Retinol dehydrogenase 13 (All-trans/9-cis), PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_445490-451869' '(at5g02540 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 333.0) no description available & (gnl|cdd|81881 : 231.0) no description available & (q01289|por_pea : 82.4) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 856.0) & (original description: Putative Rdh12, Description = Retinol dehydrogenase 12, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01897_343336-347827' '(at3g51680 : 364.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 333.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 217.0) no description available & (gnl|cdd|75407 : 185.0) no description available & (reliability: 728.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02027_75044-79510' '(at5g51030 : 452.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 213.0) no description available & (gnl|cdd|81679 : 120.0) no description available & (reliability: 904.0) & (original description: Putative CBR1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02073_578083-584388' '(at4g10020 : 514.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 239.0) no description available & (gnl|cdd|81873 : 160.0) no description available & (reliability: 1028.0) & (original description: Putative HSD5, Description = 11-beta-hydroxysteroid dehydrogenase-like 5, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02497_19415-32110' '(at3g61220 : 367.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 175.0) no description available & (gnl|cdd|81632 : 122.0) no description available & (reliability: 734.0) & (original description: Putative SDR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02576_95259-102897' '(at4g23430 : 402.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 337.0) no description available & (gnl|cdd|81881 : 266.0) no description available & (reliability: 804.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02581_76156-81469' '(at5g51030 : 447.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 211.0) no description available & (gnl|cdd|31231 : 118.0) no description available & (reliability: 894.0) & (original description: Putative CBR1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03000_197614-202941' '(at3g01980 : 336.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink). & (gnl|cdd|35944 : 147.0) no description available & (gnl|cdd|31231 : 115.0) no description available & (reliability: 672.0) & (original description: Putative ADH, Description = Alcohol dehydrogenase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03018_2145678-2163089' '(at5g04900 : 475.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 150.0) no description available & (gnl|cdd|30648 : 133.0) no description available & (reliability: 950.0) & (original description: Putative NOL, Description = Chlorophyll(ide) b reductase NOL, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03159_77214-80137' '(at2g47140 : 288.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (p50160|ts2_maize : 199.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 197.0) no description available & (gnl|cdd|82618 : 163.0) no description available & (reliability: 576.0) & (original description: Putative SDR3b, Description = Short-chain dehydrogenase reductase 3b, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03370_981833-986833' '(at3g55290 : 388.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 192.0) no description available & (gnl|cdd|81679 : 175.0) no description available & (q08632|sdr1_picab : 96.7) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (reliability: 776.0) & (original description: Putative At3g55290, Description = Putative oxidoreductase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03445_693212-699657' '(at5g50130 : 436.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36422 : 292.0) no description available & (gnl|cdd|81882 : 165.0) no description available & (reliability: 872.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03546_227281-232262' '(at4g05530 : 304.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 193.0) no description available & (gnl|cdd|82354 : 193.0) no description available & (reliability: 608.0) & (original description: Putative hdhA, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03886_509693-514328' '(at5g50700 : 437.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 265.0) no description available & (gnl|cdd|81873 : 203.0) no description available & (q5kts5|grdh_dauca : 82.4) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 874.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04063_10208-31310' '(at1g24470 : 348.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 2 (KCR2); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 1 (TAIR:AT1G67730.1); Has 80088 Blast hits to 80001 proteins in 3265 species: Archae - 726; Bacteria - 55481; Metazoa - 4714; Fungi - 3206; Plants - 2039; Viruses - 0; Other Eukaryotes - 13922 (source: NCBI BLink). & (gnl|cdd|36232 : 239.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 696.0) & (original description: Putative KCR2, Description = Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04119_355-22159' '(at1g10310 : 322.0) encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives.; NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 116138 Blast hits to 115933 proteins in 3618 species: Archae - 897; Bacteria - 77623; Metazoa - 6898; Fungi - 5998; Plants - 2845; Viruses - 2; Other Eukaryotes - 21875 (source: NCBI BLink). & (gnl|cdd|81679 : 146.0) no description available & (gnl|cdd|35944 : 136.0) no description available & (reliability: 644.0) & (original description: Putative At1g10310, Description = NADPH-dependent pterin aldehyde reductase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04167_57933-61783' '(at3g51680 : 368.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 319.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 216.0) no description available & (gnl|cdd|81632 : 186.0) no description available & (reliability: 736.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04473_1092887-1098292' '(at3g55290 : 339.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|84317 : 184.0) no description available & (q93x62|fabg1_brana : 103.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (reliability: 678.0) & (original description: Putative BnaA02g04430D, Description = BnaA02g04430D protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04641_56278-59244' '(at1g52340 : 206.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 184.0) no description available & (p50160|ts2_maize : 162.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 372.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04641_141600-144793' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 189.0) no description available & (p50160|ts2_maize : 164.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 394.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04895_155157-171041' '(at3g61220 : 340.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 156.0) no description available & (gnl|cdd|31231 : 106.0) no description available & (reliability: 680.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05035_104375-110601' '(at4g13250 : 631.0) Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NON-YELLOW COLORING 1 (NYC1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NYC1-like (TAIR:AT5G04900.1). & (gnl|cdd|35944 : 149.0) no description available & (gnl|cdd|31231 : 119.0) no description available & (reliability: 1262.0) & (original description: Putative NYC1, Description = Probable chlorophyll(ide) b reductase NYC1, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05078_812262-827621' '(at2g24190 : 288.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G61220.2); Has 72615 Blast hits to 72550 proteins in 3183 species: Archae - 711; Bacteria - 48651; Metazoa - 4595; Fungi - 3717; Plants - 2402; Viruses - 0; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|36422 : 153.0) no description available & (gnl|cdd|31231 : 105.0) no description available & (reliability: 576.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05118_309198-321055' '(at3g61220 : 285.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 158.0) no description available & (gnl|cdd|31231 : 104.0) no description available & (reliability: 570.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05688_918210-935620' '(at3g12800 : 438.0) short-chain dehydrogenase-reductase B (SDRB); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G07640.1); Has 108804 Blast hits to 108592 proteins in 3545 species: Archae - 967; Bacteria - 72835; Metazoa - 4412; Fungi - 5364; Plants - 2598; Viruses - 2; Other Eukaryotes - 22626 (source: NCBI BLink). & (gnl|cdd|82284 : 225.0) no description available & (gnl|cdd|35944 : 176.0) no description available & (q5kts5|grdh_dauca : 97.4) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 876.0) & (original description: Putative decR, Description = Peroxisomal 2,4-dienoyl-CoA reductase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05767_728190-730987' '(at3g03980 : 307.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 250.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 224.0) no description available & (gnl|cdd|35944 : 203.0) no description available & (reliability: 614.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05813_770884-774918' '(at3g50560 : 302.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink). & (gnl|cdd|36232 : 182.0) no description available & (gnl|cdd|30648 : 100.0) no description available & (reliability: 604.0) & (original description: Putative Os08g0476300, Description = Os08g0476300 protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf06186_639508-647410' '(at4g23420 : 361.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 319.0) no description available & (gnl|cdd|81881 : 241.0) no description available & (reliability: 722.0) & (original description: Putative RDH14, Description = Retinol dehydrogenase 14, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf06898_316587-324888' '(at4g20760 : 434.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (gnl|cdd|36824 : 215.0) no description available & (gnl|cdd|82770 : 187.0) no description available & (reliability: 868.0) & (original description: Putative csgA, Description = Cell-cell signaling protein, C-factor, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf07402_34732-40691' '(at4g05530 : 296.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82354 : 200.0) no description available & (gnl|cdd|35944 : 194.0) no description available & (reliability: 592.0) & (original description: Putative fabG, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf07579_331537-337530' '(at5g51030 : 433.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 210.0) no description available & (gnl|cdd|31231 : 122.0) no description available & (reliability: 866.0) & (original description: Putative Cbr1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf08308_3927-11165' '(at4g09750 : 530.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 227.0) no description available & (gnl|cdd|81881 : 123.0) no description available & (reliability: 1060.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf08390_351606-355409' '(at1g52340 : 201.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 186.0) no description available & (gnl|cdd|82618 : 180.0) no description available & (p50160|ts2_maize : 178.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 400.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf09360_323708-326807' '(at2g47140 : 271.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (gnl|cdd|35944 : 193.0) no description available & (p50160|ts2_maize : 188.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|82618 : 164.0) no description available & (reliability: 542.0) & (original description: Putative SDR3b, Description = Short-chain dehydrogenase reductase 3b, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10834_93618-105413' '(at3g03330 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03350.1); Has 112445 Blast hits to 112247 proteins in 3561 species: Archae - 906; Bacteria - 75731; Metazoa - 6658; Fungi - 6086; Plants - 2548; Viruses - 2; Other Eukaryotes - 20514 (source: NCBI BLink). & (gnl|cdd|36419 : 217.0) no description available & (gnl|cdd|30648 : 160.0) no description available & (reliability: 856.0) & (original description: Putative BnaC05g47840D, Description = BnaC05g47840D protein, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10938_27684-31547' '(at3g61220 : 270.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 133.0) no description available & (gnl|cdd|31231 : 103.0) no description available & (reliability: 540.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10938_30670-74518' '(at3g61220 : 325.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 176.0) no description available & (gnl|cdd|81625 : 164.0) no description available & (q9tl22|rk14_nepol : 115.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 650.0) & (original description: Putative rplN, Description = 50S ribosomal protein L14, PFAM = PF00238;PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14394_5038-10412' '(at4g24050 : 478.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1); Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448; Bacteria - 39701; Metazoa - 3820; Fungi - 3579; Plants - 1905; Viruses - 0; Other Eukaryotes - 9855 (source: NCBI BLink). & (gnl|cdd|36422 : 301.0) no description available & (gnl|cdd|81882 : 179.0) no description available & (q01289|por_pea : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 956.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14679_64392-67219' '(at1g52340 : 208.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 195.0) no description available & (p50160|ts2_maize : 185.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 179.0) no description available & (reliability: 402.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14958_151960-158673' '(at5g50700 : 417.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 274.0) no description available & (gnl|cdd|81873 : 219.0) no description available & (q5kts5|grdh_dauca : 82.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 834.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15286_61692-64474' '(at3g29250 : 258.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 202.0) no description available & (p50160|ts2_maize : 191.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 182.0) no description available & (reliability: 516.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15286_82181-109503' '(at2g47140 : 218.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (gnl|cdd|35944 : 208.0) no description available & (gnl|cdd|81679 : 182.0) no description available & (p50160|ts2_maize : 154.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 436.0) & (original description: Putative sadA, Description = Short-chain alcohol dehydrogenase A, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15760_5495-8656' '(at3g51680 : 235.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 206.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|82237 : 188.0) no description available & (reliability: 470.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15963_155484-161342' '(at4g10020 : 501.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 229.0) no description available & (gnl|cdd|81873 : 162.0) no description available & (reliability: 1002.0) & (original description: Putative HSD5, Description = 11-beta-hydroxysteroid dehydrogenase-like 5, PFAM = PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf17849_39489-45610' '(at3g59710 : 318.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 60289 Blast hits to 60264 proteins in 3086 species: Archae - 599; Bacteria - 42094; Metazoa - 4067; Fungi - 2569; Plants - 1993; Viruses - 0; Other Eukaryotes - 8967 (source: NCBI BLink). & (gnl|cdd|36422 : 177.0) no description available & (gnl|cdd|31231 : 118.0) no description available & (reliability: 636.0) & (original description: Putative Os02g0607700, Description = Os02g0607700 protein, PFAM = PF00106;PF00106)' T
'26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf25893_13035-16757' '(q5kts5|grdh_dauca : 470.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (at1g54870 : 469.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G05260.1); Has 123768 Blast hits to 123548 proteins in 3620 species: Archae - 996; Bacteria - 80755; Metazoa - 5748; Fungi - 6562; Plants - 2744; Viruses - 5; Other Eukaryotes - 26958 (source: NCBI BLink). & (gnl|cdd|76204 : 304.0) no description available & (gnl|cdd|35944 : 207.0) no description available & (reliability: 938.0) & (original description: Putative CAISE5, Description = Glucose and ribitol dehydrogenase, PFAM = PF13561)' T
'26.23' 'misc.rhodanese' 'nbv0.3scaffold52635_6186-14230' '(at5g19370 : 271.0) rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29091 : 130.0) no description available & (reliability: 542.0) & (original description: Putative pin3, Description = Rhodanese-related sulfurtransferase, PFAM = PF13616;PF00581)' T
'26.23' 'misc.rhodanese' 'nbv0.3scaffold61179_4529-8416' '(at3g08920 : 237.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative Sb01g038530, Description = Putative uncharacterized protein Sb01g038530, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'nbv0.5scaffold3939_44014-85855' '(at5g03455 : 117.0) Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.; CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ACR2, Description = Arath, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'nbv0.5scaffold5709_20481-30979' '(at2g40760 : 542.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|31254 : 335.0) no description available & (reliability: 1084.0) & (original description: Putative glpE, Description = UPF0176 protein glpE, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben044scf00007177ctg025_1-4810' '(at2g42220 : 318.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 955 Blast hits to 955 proteins in 207 species: Archae - 14; Bacteria - 343; Metazoa - 1; Fungi - 0; Plants - 204; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative STR9, Description = Rhodanese-like domain-containing protein 9, chloroplastic, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben044scf00013051ctg001_27564-36052' '(at3g25480 : 220.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: thylakoid rhodanese-like (TAIR:AT4G01050.1); Has 72 Blast hits to 72 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative STR4A, Description = Rhodanese-like domain-containing protein 4A, chloroplastic, PFAM = )' T
'26.23' 'misc.rhodanese' 'niben044scf00042440ctg004_19328-23766' '(at3g08920 : 194.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative STR10, Description = Rhodanese-like family protein-like protein, PFAM = )' T
'26.23' 'misc.rhodanese' 'niben101scf01550_178366-182403' '(at4g27700 : 282.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47756 : 81.4) no description available & (reliability: 564.0) & (original description: Putative F383_29003, Description = Thiosulfate sulfurtransferase, chloroplastic-like protein, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben101scf01696_75667-81157' '(at5g03455 : 205.0) Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.; CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29094 : 131.0) no description available & (reliability: 410.0) & (original description: Putative CDC25, Description = Dual specificity phosphatase Cdc25, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben101scf02093_463142-473430' '(at3g25480 : 218.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: thylakoid rhodanese-like (TAIR:AT4G01050.1); Has 72 Blast hits to 72 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative STR4A, Description = Rhodanese-like domain-containing protein 4A, chloroplastic, PFAM = )' T
'26.23' 'misc.rhodanese' 'niben101scf03494_1114702-1120003' '(at2g42220 : 323.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 955 Blast hits to 955 proteins in 207 species: Archae - 14; Bacteria - 343; Metazoa - 1; Fungi - 0; Plants - 204; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative STR9, Description = Rhodanese-like domain-containing protein 9, chloroplastic, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben101scf03739_644030-651079' '(at2g40760 : 539.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|31254 : 329.0) no description available & (reliability: 1078.0) & (original description: Putative glpE, Description = UPF0176 protein glpE, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben101scf04732_61208-74261' '(at5g19370 : 275.0) rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29091 : 130.0) no description available & (reliability: 550.0) & (original description: Putative pin3, Description = Rhodanese-related sulfurtransferase, PFAM = PF00581;PF13616)' T
'26.23' 'misc.rhodanese' 'niben101scf05307_552466-556883' '(at3g08920 : 237.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative Sb01g038530, Description = Putative uncharacterized protein Sb01g038530, PFAM = PF00581)' T
'26.23' 'misc.rhodanese' 'niben101scf13141_271925-278657' '(at4g27700 : 280.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47756 : 83.7) no description available & (reliability: 560.0) & (original description: Putative At4g27700, Description = Rhodanese-like domain-containing protein 14, chloroplastic, PFAM = PF00581)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold1353_1-3783' '(at2g39020 : 163.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 155.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 125.0) no description available & (reliability: 326.0) & (original description: Putative PGSC0003DMG400037933, Description = Acyl-CoA N-acyltransferase (NAT) family protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold7879_312-11311' '(at2g22910 : 789.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 396.0) no description available & (gnl|cdd|58603 : 302.0) no description available & (reliability: 1578.0) & (original description: Putative NAGS1, Description = Probable amino-acid acetyltransferase NAGS1, chloroplastic, PFAM = PF00583;PF00696)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold8231_25097-29207' '(at2g23060 : 552.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1104.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold8406_7106-11169' '(at2g06025 : 308.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold12385_30808-35798' '(at1g18335 : 223.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 83.1) no description available & (reliability: 446.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold25450_17895-20952' '(at5g16800 : 158.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (reliability: 316.0) & (original description: Putative MCC1, Description = GCN5-like N-acetyltransferase, PFAM = )' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold29246_18842-23803' '(at1g72030 : 204.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BnaA07g23290D, Description = BnaA07g23290D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold42129_6899-18430' '(at2g04845 : 266.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39338 : 174.0) no description available & (reliability: 532.0) & (original description: Putative nat9, Description = N-acetyltransferase 9-like protein, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold110676_326-2885' '(at2g32030 : 213.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 98.1) no description available & (reliability: 426.0) & (original description: Putative speG, Description = Spermidine N(1)-acetyltransferase, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold688_632856-636352' '(at2g06025 : 199.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative pco109208b, Description = Acyl-CoA N-acyltransferases (NAT) superfamily protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold1448_163921-265488' '(at2g06025 : 227.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold3060_365437-368280' '(at2g41450 : 204.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative GNAT13, Description = N-acetyltransferase, PFAM = )' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold3787_181219-226841' '(at4g19985 : 160.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400011658, Description = Putative acetyltransferase NSI, PFAM = )' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00001152ctg013_1013-7104' '(at4g28030 : 280.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC06g05060D, Description = BnaC06g05060D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00001385ctg009_11349-15147' '(at2g39020 : 157.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (p80969|tht10_tobac : 145.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 130.0) no description available & (reliability: 314.0) & (original description: Putative PGSC0003DMG400037933, Description = Tyramine N-feruloyltransferase 4/11, putative, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00002903ctg001_816-5192' '(at5g11340 : 181.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 115.0) no description available & (reliability: 362.0) & (original description: Putative NAA50, Description = N-alpha-acetyltransferase 50, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00011447ctg011_2905-5582' '(p80969|tht10_tobac : 420.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 157.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 93.0) no description available & (reliability: 314.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00020779ctg000_5240-10374' '(at1g72030 : 195.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative BnaA07g23290D, Description = BnaA07g23290D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00035409ctg007_1-8465' '(at2g22910 : 455.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|58603 : 301.0) no description available & (gnl|cdd|37647 : 295.0) no description available & (reliability: 910.0) & (original description: Putative argA, Description = Amino-acid acetyltransferase, PFAM = PF00696)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00494_739991-744188' '(at1g72030 : 194.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative 21, Description = Acetyltransferase+GNAT+family, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00797_1749515-1764580' '(at2g06025 : 229.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00991_1014537-1018156' '(at2g23060 : 581.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1162.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01063_255438-260257' '(at5g16800 : 325.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (gnl|cdd|38348 : 133.0) no description available & (reliability: 650.0) & (original description: Putative MCC1, Description = Histone acetyltransferase MCC1, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01177_194159-198714' '(at2g38130 : 281.0) Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.; ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38349 : 197.0) no description available & (reliability: 562.0) & (original description: Putative MAK3, Description = N-alpha-acetyltransferase MAK3, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01545_74706-83569' '(at5g11340 : 264.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 156.0) no description available & (reliability: 528.0) & (original description: Putative Naa50, Description = N-alpha-acetyltransferase 50, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01943_931910-945676' '(at2g04845 : 219.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39338 : 151.0) no description available & (reliability: 438.0) & (original description: Putative RimL, Description = RimL/acetyltransferase-domain protein, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02282_114748-118858' '(at4g37580 : 555.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02354_551922-555724' '(at2g39020 : 185.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 163.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 126.0) no description available & (reliability: 370.0) & (original description: Putative At2g39020, Description = Probable acetyltransferase NATA1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02354_745107-747835' '(at2g39030 : 193.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p80969|tht10_tobac : 153.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 118.0) no description available & (reliability: 386.0) & (original description: Putative NATA1, Description = L-ornithine N5-acetyltransferase NATA1, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02510_568763-572758' '(at2g30330 : 136.0) Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport.; GCN5L1 family protein; CONTAINS InterPro DOMAIN/s: GCN5-like 1 (InterPro:IPR009395); Has 190 Blast hits to 190 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 8; Plants - 43; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38600 : 110.0) no description available & (reliability: 272.0) & (original description: Putative Sb05g001020, Description = Putative uncharacterized protein Sb05g001020, PFAM = PF06320)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02613_250156-257405' '(at5g11340 : 253.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 145.0) no description available & (reliability: 506.0) & (original description: Putative san, Description = Probable N-acetyltransferase san, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02669_200110-205783' '(at2g39000 : 350.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative At2g39000, Description = Acyl-CoA N-acyltransferases superfamily protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03121_494742-499703' '(at1g72030 : 204.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative 21, Description = Acetyltransferase+GNAT+family, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03446_464581-467258' '(p80969|tht10_tobac : 417.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 154.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 93.4) no description available & (reliability: 308.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03446_847916-861375' '(at2g39020 : 173.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 149.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 119.0) no description available & (reliability: 346.0) & (original description: Putative glysoja_047558, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03712_77051-79755' '(at2g39020 : 308.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|38426 : 195.0) no description available & (q9smb8|tht11_tobac : 162.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (reliability: 616.0) & (original description: Putative At2g39020, Description = Probable acetyltransferase NATA1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03747_530038-545570' '(at2g22910 : 776.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 396.0) no description available & (gnl|cdd|58603 : 300.0) no description available & (reliability: 1552.0) & (original description: Putative NAGS2, Description = Probable amino-acid acetyltransferase NAGS2, chloroplastic, PFAM = PF00583;PF00696)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03952_341040-344899' '(at2g39020 : 171.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (p80969|tht10_tobac : 162.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 121.0) no description available & (reliability: 342.0) & (original description: Putative RCOM_0263630, Description = Tyramine N-feruloyltransferase 4/11, putative, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03986_159218-165370' '(at5g16800 : 290.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (gnl|cdd|38348 : 130.0) no description available & (reliability: 580.0) & (original description: Putative MCC1, Description = Histone acetyltransferase MCC1, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04177_70799-73527' '(p80969|tht10_tobac : 325.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 155.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 91.9) no description available & (reliability: 310.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04329_11968-14435' '(at5g15770 : 202.0) Encodes a putative glucose-6-phosphate acetyltransferase involved in UDP-N-acetylglucosamine biosynthesis.; glucose-6-phosphate acetyltransferase 1 (GNA1); FUNCTIONS IN: glucosamine 6-phosphate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 806 Blast hits to 799 proteins in 307 species: Archae - 17; Bacteria - 208; Metazoa - 186; Fungi - 170; Plants - 47; Viruses - 3; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|38606 : 187.0) no description available & (reliability: 404.0) & (original description: Putative GNA1, Description = Glucosamine 6-phosphate N-acetyltransferase, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04396_465124-467718' '(at3g22560 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|31856 : 92.3) no description available & (reliability: 382.0) & (original description: Putative BnaC03g34040D, Description = BnaA03g28880D protein, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04607_431230-443313' '(at2g22910 : 781.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 402.0) no description available & (gnl|cdd|58603 : 303.0) no description available & (reliability: 1562.0) & (original description: Putative NAGS1, Description = Probable amino-acid acetyltransferase NAGS1, chloroplastic, PFAM = PF00583;PF00696)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf05084_18423-24061' '(at1g18335 : 238.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 86.2) no description available & (reliability: 476.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06650_307047-312257' '(at2g32030 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 95.0) no description available & (reliability: 382.0) & (original description: Putative GNAT27, Description = GNAT transcription factor, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06650_370530-373135' '(at2g32030 : 211.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 97.7) no description available & (reliability: 422.0) & (original description: Putative GNAT27, Description = GNAT transcription factor, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf07165_258562-263929' '(at1g18335 : 205.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 82.4) no description available & (reliability: 410.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08179_77857-83705' '(at4g19985 : 179.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PGSC0003DMG400011658, Description = Putative acetyltransferase NSI, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08581_84557-94375' '(at4g28030 : 280.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC06g05060D, Description = BnaC06g05060D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08758_218895-222233' '(at2g30090 : 363.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, male gametophyte; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 320 Blast hits to 320 proteins in 91 species: Archae - 28; Bacteria - 42; Metazoa - 134; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative BnaC04g14700D, Description = BnaC04g14700D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08926_795337-807024' '(at1g32070 : 289.0) Encodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.; nuclear shuttle interacting (NSI); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: pathogenesis, metabolic process, spread of virus in host; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G26220.1); Has 2159 Blast hits to 2159 proteins in 620 species: Archae - 23; Bacteria - 1709; Metazoa - 2; Fungi - 19; Plants - 107; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative ycf52, Description = Ycf52 protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09234_2875-5423' '(at3g22560 : 131.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative PGSC0003DMG400038970, Description = Acetyltransferase (GNAT) domain protein, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09234_7726-10244' '(at3g22560 : 148.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|31856 : 91.2) no description available & (reliability: 296.0) & (original description: Putative BnaC03g34040D, Description = BnaA03g28880D protein, PFAM = PF13302)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09906_215321-222642' '(at1g32070 : 293.0) Encodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.; nuclear shuttle interacting (NSI); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: pathogenesis, metabolic process, spread of virus in host; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G26220.1); Has 2159 Blast hits to 2159 proteins in 620 species: Archae - 23; Bacteria - 1709; Metazoa - 2; Fungi - 19; Plants - 107; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative NSI, Description = Acetyltransferase NSI, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf10002_66236-70817' '(at1g24040 : 276.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 119 Blast hits to 119 proteins in 41 species: Archae - 9; Bacteria - 28; Metazoa - 4; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaA09g29830D, Description = BnaA09g29830D protein, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf10613_1-2375' '(at1g26220 : 258.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 1297 Blast hits to 1297 proteins in 410 species: Archae - 14; Bacteria - 927; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative ycf52, Description = Putative N-acetyltransferase ycf52, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf11305_122592-144478' '(at2g41450 : 513.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37254 : 156.0) no description available & (reliability: 1026.0) & (original description: Putative GNAT13, Description = GNAT transcription factor, PFAM = PF16770)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf20727_1-3401' '(at2g23060 : 575.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1150.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T
'26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf38970_1-6673' '(at4g19985 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At4g19985, Description = GCN5-related N-acetyltransferase (GNAT) family protein, PFAM = PF00583)' T
'26.25' 'misc.sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T
'26.25' 'misc.sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 438.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T
'26.25' 'misc.sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T
'26.25' 'misc.sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T
'26.25' 'misc.sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 560.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T
'26.26' 'misc.aminotransferases' '' ''
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.3scaffold7144_12115-29862' '(at5g27410 : 840.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (gnl|cdd|29569 : 309.0) no description available & (gnl|cdd|36193 : 187.0) no description available & (reliability: 1680.0) & (original description: Putative aat, Description = Aminotransferase class IV, PFAM = PF01063)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.3scaffold33864_911-15692' '(at5g27400 : 293.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative At5g27400, Description = At5g27400, PFAM = PF10294)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.5scaffold674_545011-551323' '(at5g57850 : 450.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 217.0) no description available & (gnl|cdd|29570 : 187.0) no description available & (reliability: 900.0) & (original description: Putative DAAT, Description = D-amino-acid transaminase, chloroplastic, PFAM = PF01063)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.5scaffold1122_701346-708818' '(at5g27410 : 216.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (reliability: 432.0) & (original description: Putative TCM_026602, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative isoform 2, PFAM = PF10294)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf00963_55385-94891' '(at5g27410 : 847.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (gnl|cdd|29569 : 312.0) no description available & (gnl|cdd|36193 : 187.0) no description available & (reliability: 1694.0) & (original description: Putative aat, Description = Aminotransferase class IV, PFAM = PF01063)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf04745_426824-432243' '(at5g57850 : 374.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29570 : 210.0) no description available & (gnl|cdd|36193 : 170.0) no description available & (reliability: 748.0) & (original description: Putative DAAT, Description = D-amino-acid transaminase, chloroplastic, PFAM = PF01063)' T
'26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf08776_330243-336555' '(at5g57850 : 356.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 165.0) no description available & (gnl|cdd|29570 : 145.0) no description available & (reliability: 712.0) & (original description: Putative Sb04g010240, Description = Putative uncharacterized protein Sb04g010240, PFAM = PF01063)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'nbv0.3scaffold14219_18780-28106' '(at1g53710 : 580.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|38866 : 205.0) no description available & (reliability: 1160.0) & (original description: Putative At1g53710, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'nbv0.3scaffold52652_1915-7147' '(at1g07010 : 552.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35595 : 91.9) no description available & (reliability: 1104.0) & (original description: Putative SLP1, Description = Shewanella-like protein phosphatase 1, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf00219_227689-243841' '(at4g11800 : 1529.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3000.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01411_19881-29924' '(at3g47810 : 350.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38535 : 308.0) no description available & (gnl|cdd|30967 : 104.0) no description available & (reliability: 700.0) & (original description: Putative VPS29, Description = Vacuolar protein sorting-associated protein 29, PFAM = PF12850)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01681_163935-167122' '(at1g18480 : 491.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative SLP2, Description = Shewanella-like protein phosphatase 2, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01887_865363-879825' '(at4g23000 : 1548.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species: Archae - 0; Bacteria - 98; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 3096.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf03194_20265-23467' '(at3g47810 : 265.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38535 : 227.0) no description available & (gnl|cdd|30967 : 88.5) no description available & (reliability: 530.0) & (original description: Putative vps29, Description = Vacuolar protein sorting-associated protein 29, PFAM = PF12850)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf06942_287071-291521' '(at1g07010 : 554.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35595 : 94.6) no description available & (reliability: 1108.0) & (original description: Putative SLP1, Description = Shewanella-like protein phosphatase 1, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf08947_261680-269798' '(at3g03305 : 727.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 171 Blast hits to 169 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 10; Plants - 59; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|35920 : 139.0) no description available & (reliability: 1454.0) & (original description: Putative At3g03305, Description = Putative metallophosphoesterase At3g03305, PFAM = PF00149)' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf09101_19272-26189' '(at1g07010 : 303.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative CPL3, Description = Calcineurin-like phosphoesterase family protein, PFAM = )' T
'26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf12690_124721-136740' '(at1g53710 : 542.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|38866 : 205.0) no description available & (reliability: 1084.0) & (original description: Putative At1g53710, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, PFAM = PF00149)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6398_24173-28487' '(at5g14450 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 296.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 286.0) no description available & (reliability: 698.0) & (original description: Putative ache, Description = Acetylcholinesterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6618_8190-21065' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 314.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 700.0) & (original description: Putative At1g28570, Description = GDSL esterase/lipase At1g28570, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6618_10469-21098' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 313.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 700.0) & (original description: Putative BnaA07g08280D, Description = BnaA07g08280D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold14764_747-5515' '(at5g33370 : 530.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1060.0) & (original description: Putative Sb04g037130, Description = Putative uncharacterized protein Sb04g037130, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold14771_9122-13080' '(at5g03980 : 275.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 265.0) no description available & (q7y1x1|est_hevbr : 147.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 550.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold15446_21449-34291' '(gnl|cdd|58514 : 250.0) no description available & (at1g71691 : 208.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold27290_1027-16166' '(gnl|cdd|58514 : 334.0) no description available & (at5g55050 : 273.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 150.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 546.0) & (original description: Putative CPRD47, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold32663_11374-18193' '(at1g75900 : 404.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 387.0) no description available & (p40603|apg_brana : 258.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold37089_2659-20891' '(at1g29670 : 337.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 299.0) no description available & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 674.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657;PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold39123_2892-13835' '(gnl|cdd|58514 : 289.0) no description available & (at1g71250 : 225.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 450.0) & (original description: Putative Os06g0560700, Description = Os06g0560700 protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold40426_12705-17424' '(at1g09390 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (q7y1x1|est_hevbr : 229.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 698.0) & (original description: Putative At1g09390, Description = GDSL esterase/lipase At1g09390, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold40426_13291-17421' '(at1g09390 : 341.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 249.0) no description available & (q7y1x1|est_hevbr : 224.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 682.0) & (original description: Putative Sb03g013400, Description = Putative uncharacterized protein Sb03g013400, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold43873_1-7523' '(at5g62930 : 373.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 309.0) no description available & (gnl|cdd|58515 : 265.0) no description available & (reliability: 746.0) & (original description: Putative At5g62930, Description = GDSL esterase/lipase At5g62930, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold44772_196-17066' '(at2g24560 : 182.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (p40603|apg_brana : 117.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 364.0) & (original description: Putative EXL1, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold50584_5708-14962' '(gnl|cdd|58514 : 172.0) no description available & (at1g75880 : 147.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 117.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 268.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold62714_2320-6838' '(at1g29670 : 318.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 281.0) no description available & (p40603|apg_brana : 102.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 636.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold81152_1178-6933' '(at3g11210 : 406.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 313.0) no description available & (gnl|cdd|58515 : 242.0) no description available & (reliability: 812.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold81300_1560-6909' '(at5g03820 : 476.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 338.0) no description available & (p40603|apg_brana : 206.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 952.0) & (original description: Putative At5g03810, Description = GDSL esterase/lipase At5g03810, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold136_980962-991761' '(gnl|cdd|58514 : 293.0) no description available & (at1g29670 : 238.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p40603|apg_brana : 150.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 476.0) & (original description: Putative Os06g0560700, Description = Os06g0560700 protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold201_859098-1084865' '(gnl|cdd|58514 : 294.0) no description available & (at1g29660 : 281.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (p40603|apg_brana : 85.9) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold356_554264-563243' '(at5g03610 : 351.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 243.0) no description available & (p40603|apg_brana : 107.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 702.0) & (original description: Putative At5g03610, Description = GDSL esterase/lipase At5g03610, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold843_579868-586273' '(at5g45910 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3231 Blast hits to 3179 proteins in 126 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 3108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|58514 : 312.0) no description available & (q7y1x1|est_hevbr : 143.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 698.0) & (original description: Putative At5g45910, Description = GDSL esterase/lipase At5g45910, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold899_1026-24597' '(at5g03610 : 237.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 128.0) no description available & (reliability: 474.0) & (original description: Putative GDSL, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1004_503063-512113' '(at1g75900 : 406.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 383.0) no description available & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 748.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1463_152915-448225' '(q7y1x1|est_hevbr : 88.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (at5g14450 : 87.8) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative At3g27950, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1498_53673-78876' '(at1g53920 : 412.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 340.0) no description available & (p40603|apg_brana : 134.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 824.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1631_419490-422590' '(gnl|cdd|58514 : 271.0) no description available & (at1g28590 : 267.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 534.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold3790_134364-137416' '(gnl|cdd|58514 : 162.0) no description available & (at1g28650 : 159.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold4452_96745-112055' '(at5g08460 : 409.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G71250.1); Has 3252 Blast hits to 3210 proteins in 140 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 11; Plants - 3054; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|58514 : 329.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 818.0) & (original description: Putative At5g08460, Description = GDSL esterase/lipase At5g08460, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold4642_8554-12488' '(at2g38180 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT3G11210.1); Has 749 Blast hits to 745 proteins in 289 species: Archae - 0; Bacteria - 287; Metazoa - 79; Fungi - 158; Plants - 167; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|38245 : 259.0) no description available & (gnl|cdd|58515 : 228.0) no description available & (reliability: 542.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold5590_1-18235' '(at1g29670 : 337.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 299.0) no description available & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 674.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657;PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold6004_78313-94287' '(gnl|cdd|58514 : 279.0) no description available & (at5g03980 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold6617_29570-32691' '(gnl|cdd|58514 : 169.0) no description available & (at1g28670 : 162.0) Arabidopsis thaliana lipase; ARAB-1; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28660.1); Has 3359 Blast hits to 3311 proteins in 183 species: Archae - 0; Bacteria - 261; Metazoa - 0; Fungi - 0; Plants - 3095; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 80.1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 320.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00000867ctg038_488-15032' '(gnl|cdd|58514 : 386.0) no description available & (at1g75880 : 384.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 744.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00001659ctg003_1433-6617' '(gnl|cdd|58514 : 334.0) no description available & (at5g45950 : 321.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 642.0) & (original description: Putative At5g45950, Description = GDSL esterase/lipase At5g45950, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00002513ctg002_1-3137' '(gnl|cdd|58514 : 205.0) no description available & (at4g10950 : 203.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 80.5) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 406.0) & (original description: Putative PGSC0003DMG400027399, Description = SGNH hydrolase-type esterase superfamily protein, putative isoform 1, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00003331ctg007_1-6241' '(gnl|cdd|58514 : 123.0) no description available & (at1g29660 : 111.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00005612ctg021_313-2926' '(at3g27950 : 106.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G14450.1); Has 3142 Blast hits to 3112 proteins in 96 species: Archae - 0; Bacteria - 88; Metazoa - 0; Fungi - 8; Plants - 3037; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q7y1x1|est_hevbr : 102.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 210.0) & (original description: Putative At3g27950, Description = Alpha-L-fucosidase 2, putative, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00007218ctg001_3333-6309' '(at1g28650 : 161.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 161.0) no description available & (reliability: 314.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00008524ctg020_5414-20725' '(at5g08460 : 414.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G71250.1); Has 3252 Blast hits to 3210 proteins in 140 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 11; Plants - 3054; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|58514 : 329.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 828.0) & (original description: Putative At5g08460, Description = GDSL esterase/lipase At5g08460, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00009781ctg008_10773-15969' '(at5g33370 : 537.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 336.0) no description available & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1074.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00010289ctg027_13479-17951' '(at2g04570 : 427.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 361.0) no description available & (p40603|apg_brana : 194.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 854.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00014688ctg000_1-4570' '(at5g03610 : 192.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 139.0) no description available & (reliability: 384.0) & (original description: Putative GDSL, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00016724ctg010_333-3031' '(at2g24560 : 197.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 188.0) no description available & (p40603|apg_brana : 104.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 394.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00018969ctg004_651-4938' '(at4g10950 : 510.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58514 : 327.0) no description available & (p40603|apg_brana : 123.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1020.0) & (original description: Putative BnaA09g22200D, Description = BnaA09g22200D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00018969ctg004_723-4106' '(at4g10950 : 356.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58514 : 238.0) no description available & (reliability: 712.0) & (original description: Putative At4g10950, Description = SGNH hydrolase-type esterase superfamily protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00019621ctg004_1903-8817' '(at1g71691 : 280.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 265.0) no description available & (p40603|apg_brana : 85.5) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 560.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00024241ctg002_756-5176' '(at1g29670 : 309.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 301.0) no description available & (p40603|apg_brana : 124.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 618.0) & (original description: Putative At1g29660, Description = GDSL esterase/lipase At1g29660, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00027354ctg000_24298-29107' '(at3g48460 : 246.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 236.0) no description available & (q7y1x1|est_hevbr : 107.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 492.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00029384ctg005_24801-28716' '(at2g24560 : 371.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 362.0) no description available & (p40603|apg_brana : 210.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 742.0) & (original description: Putative At2g31550, Description = GDSL esterase/lipase At2g31550, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00031491ctg003_18863-22883' '(at2g23540 : 545.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 352.0) no description available & (q7y1x1|est_hevbr : 131.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1090.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00035312ctg002_3366-8001' '(at5g45670 : 531.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 346.0) no description available & (p40603|apg_brana : 156.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1062.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00041852ctg000_4415-9052' '(at1g29670 : 305.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 282.0) no description available & (p40603|apg_brana : 103.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 610.0) & (original description: Putative At2g19050, Description = GDSL esterase/lipase At2g19050, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00045522ctg004_24155-26720' '(at3g50400 : 147.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G23540.1); Has 3614 Blast hits to 3577 proteins in 268 species: Archae - 0; Bacteria - 447; Metazoa - 0; Fungi - 31; Plants - 3117; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|58514 : 114.0) no description available & (reliability: 294.0) & (original description: Putative csu861, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben044scf00049158ctg001_1033-5103' '(at3g04290 : 286.0) Li-tolerant lipase 1 (LTL1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G33370.1); Has 3364 Blast hits to 3325 proteins in 174 species: Archae - 0; Bacteria - 234; Metazoa - 0; Fungi - 3; Plants - 3111; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 196.0) no description available & (p40603|apg_brana : 98.2) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 572.0) & (original description: Putative csu861, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00023_286403-320709' '(gnl|cdd|58514 : 328.0) no description available & (at5g55050 : 265.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 157.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 530.0) & (original description: Putative CPRD47, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00065_36902-41395' '(at1g75900 : 392.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 388.0) no description available & (p40603|apg_brana : 273.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00067_107630-112413' '(at3g16370 : 506.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G22810.1); Has 3678 Blast hits to 3640 proteins in 303 species: Archae - 0; Bacteria - 507; Metazoa - 0; Fungi - 26; Plants - 3124; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 358.0) no description available & (p40603|apg_brana : 192.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1012.0) & (original description: Putative APG, Description = GDSL esterase/lipase APG, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00288_676305-679038' '(at2g30220 : 384.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30310.1); Has 3378 Blast hits to 3337 proteins in 196 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 20; Plants - 3071; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 364.0) no description available & (p40603|apg_brana : 228.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 768.0) & (original description: Putative At2g30220, Description = GDSL esterase/lipase At2g30220, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00408_1145612-1158460' '(at1g71691 : 381.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 112.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 762.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00416_571369-574493' '(at5g03980 : 296.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 288.0) no description available & (q7y1x1|est_hevbr : 162.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 592.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00539_163447-196188' '(gnl|cdd|58514 : 388.0) no description available & (at1g75880 : 380.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 746.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00539_182346-185972' '(at1g75880 : 387.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 386.0) no description available & (p40603|apg_brana : 266.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 744.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL1, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00571_51171-59478' '(gnl|cdd|58514 : 327.0) no description available & (at5g55050 : 283.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 146.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 566.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00571_54610-59397' '(gnl|cdd|58514 : 336.0) no description available & (at5g55050 : 294.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 588.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase At5g55050, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00766_109259-113018' '(at3g26430 : 558.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 422.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 306.0) no description available & (reliability: 1116.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf00766_133534-149440' '(at3g26430 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 430.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 317.0) no description available & (reliability: 1006.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01005_50807-54853' '(gnl|cdd|58514 : 370.0) no description available & (at2g23540 : 332.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p40603|apg_brana : 132.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 664.0) & (original description: Putative At4g16230, Description = GDSL esterase/lipase At4g16230, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01064_630610-634909' '(at5g45910 : 192.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3231 Blast hits to 3179 proteins in 126 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 3108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|58514 : 180.0) no description available & (reliability: 384.0) & (original description: Putative pco061737, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01191_478279-482229' '(at5g03980 : 261.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (q7y1x1|est_hevbr : 142.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 522.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01212_276769-281876' '(gnl|cdd|58514 : 256.0) no description available & (at5g45950 : 242.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 86.3) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 484.0) & (original description: Putative APG, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01220_343078-353991' '(at5g33370 : 512.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 334.0) no description available & (p40603|apg_brana : 165.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1024.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01228_173307-183445' '(at1g28570 : 199.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (q7y1x1|est_hevbr : 89.4) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 398.0) & (original description: Putative pco061737, Description = GDSL esterase/lipase At5g45910 family, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01438_65896-69017' '(gnl|cdd|58514 : 293.0) no description available & (at1g28570 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 542.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01497_536036-550482' '(gnl|cdd|58514 : 282.0) no description available & (at5g33370 : 209.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p40603|apg_brana : 149.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 418.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01603_13647-19807' '(at5g62930 : 223.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 204.0) no description available & (gnl|cdd|58515 : 180.0) no description available & (reliability: 446.0) & (original description: Putative iah1, Description = Isoamyl acetate-hydrolyzing esterase 1 homolog, PFAM = PF13472)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01670_195543-352277' '(at5g03980 : 90.1) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400013195, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01670_224245-245923' '(gnl|cdd|58514 : 267.0) no description available & (at5g03980 : 258.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 141.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 516.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01681_351124-354254' '(gnl|cdd|58514 : 270.0) no description available & (at1g28640 : 269.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 135.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 538.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01702_144412-152434' '(gnl|cdd|58514 : 386.0) no description available & (at1g75900 : 377.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 271.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 726.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01702_145770-151618' '(at1g75900 : 254.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (p40603|apg_brana : 162.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 466.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01740_1611353-1620652' '(at5g03980 : 288.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 259.0) no description available & (q7y1x1|est_hevbr : 149.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 576.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf01826_539006-543433' '(at3g48460 : 430.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 286.0) no description available & (q7y1x1|est_hevbr : 154.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 860.0) & (original description: Putative At3g48460, Description = GDSL esterase/lipase At3g48460, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02073_791531-798166' '(at1g71691 : 458.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 345.0) no description available & (p40603|apg_brana : 134.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 916.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02073_791680-795289' '(at1g71691 : 305.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 222.0) no description available & (reliability: 610.0) & (original description: Putative BnaCnng66890D, Description = BnaCnng66890D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02117_18361-25732' '(at1g33811 : 501.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45670.1); Has 3440 Blast hits to 3395 proteins in 215 species: Archae - 0; Bacteria - 336; Metazoa - 0; Fungi - 3; Plants - 3084; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1002.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase At1g33811, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02207_938351-949849' '(at5g62930 : 365.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 300.0) no description available & (gnl|cdd|58515 : 260.0) no description available & (reliability: 730.0) & (original description: Putative At5g62930, Description = GDSL esterase/lipase At5g62930, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02387_50552-55345' '(gnl|cdd|58514 : 185.0) no description available & (at5g55050 : 140.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 84.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 280.0) & (original description: Putative si687072a12, Description = GDSL-like lipase/acylhydrolase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02387_59431-65078' '(gnl|cdd|58514 : 336.0) no description available & (at5g55050 : 274.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 151.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 548.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase At5g55050, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02406_84429-87626' '(gnl|cdd|58514 : 162.0) no description available & (at5g03980 : 150.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02408_203674-206798' '(gnl|cdd|58514 : 169.0) no description available & (at1g28650 : 164.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 86.7) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 320.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf02869_1239223-1250296' '(at1g28580 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 300.0) no description available & (q7y1x1|est_hevbr : 125.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 600.0) & (original description: Putative Os05g0209600, Description = Os05g0209600 protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03023_415758-423810' '(at1g28590 : 386.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 772.0) & (original description: Putative At1g28600, Description = GDSL esterase/lipase At1g28600, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03062_586205-590743' '(gnl|cdd|58514 : 361.0) no description available & (at2g40250 : 359.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, sepal, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G31540.1); Has 3497 Blast hits to 3457 proteins in 215 species: Archae - 0; Bacteria - 337; Metazoa - 0; Fungi - 15; Plants - 3125; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p40603|apg_brana : 232.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 718.0) & (original description: Putative At2g40250, Description = GDSL esterase/lipase At2g40250, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03121_1-3749' '(gnl|cdd|58514 : 316.0) no description available & (at5g40990 : 301.0) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.; GDSL lipase 1 (GLIP1); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 2 (TAIR:AT1G53940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 136.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 602.0) & (original description: Putative BnaCnng62410D, Description = BnaCnng62410D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03143_1147990-1154143' '(at3g26430 : 507.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 432.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 319.0) no description available & (reliability: 1014.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03257_199453-204210' '(at1g71250 : 472.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (p40603|apg_brana : 147.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 944.0) & (original description: Putative BnaA07g23600D, Description = BnaA07g23590D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03273_307895-313496' '(at1g71691 : 464.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 349.0) no description available & (p40603|apg_brana : 130.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 928.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03273_375908-386660' '(gnl|cdd|58514 : 212.0) no description available & (at1g71691 : 209.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative Ccrd_022299, Description = Lipase, GDSL, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03295_660116-664928' '(gnl|cdd|58514 : 314.0) no description available & (at1g53920 : 292.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p40603|apg_brana : 110.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 584.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03300_575441-578687' '(at5g03980 : 162.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 162.0) no description available & (q7y1x1|est_hevbr : 83.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 324.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03340_567593-583852' '(gnl|cdd|58514 : 288.0) no description available & (at1g71250 : 224.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 448.0) & (original description: Putative RCOM_0664320, Description = Zinc finger protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03497_970503-973630' '(gnl|cdd|58514 : 279.0) no description available & (at1g28640 : 260.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 520.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03497_1024418-1027548' '(gnl|cdd|58514 : 289.0) no description available & (at1g28570 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03674_121652-154011' '(at5g03610 : 421.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 260.0) no description available & (p40603|apg_brana : 113.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 842.0) & (original description: Putative At5g03610, Description = GDSL esterase/lipase At5g03610, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03786_64999-71373' '(at2g04570 : 412.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 355.0) no description available & (p40603|apg_brana : 172.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 824.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03913_105991-109195' '(gnl|cdd|58514 : 300.0) no description available & (at5g55050 : 214.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 428.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03949_495713-499934' '(at1g71250 : 477.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|58514 : 332.0) no description available & (p40603|apg_brana : 145.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 954.0) & (original description: Putative At1g71250, Description = GDSL esterase/lipase At1g71250, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03964_215198-219347' '(at2g30220 : 360.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30310.1); Has 3378 Blast hits to 3337 proteins in 196 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 20; Plants - 3071; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 199.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 720.0) & (original description: Putative At2g42990, Description = GDSL esterase/lipase At2g42990, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf03973_40457-45372' '(at5g22810 : 480.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 361.0) no description available & (p40603|apg_brana : 226.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 960.0) & (original description: Putative At5g22810, Description = GDSL esterase/lipase At5g22810, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04015_195685-199283' '(at1g54790 : 581.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G05180.1). & (gnl|cdd|58514 : 301.0) no description available & (q7y1x1|est_hevbr : 290.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1162.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04044_1353821-1363892' '(at3g11210 : 410.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 315.0) no description available & (gnl|cdd|58515 : 245.0) no description available & (reliability: 820.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04109_326630-332925' '(at1g71120 : 471.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 306.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 942.0) & (original description: Putative GLIP6, Description = GDSL esterase/lipase 6, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04230_9846-14877' '(at5g33370 : 537.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 336.0) no description available & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1074.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04738_261561-266329' '(at5g33370 : 531.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1062.0) & (original description: Putative At5g18430, Description = GDSL esterase/lipase At5g18430, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf04875_725980-730406' '(at5g03820 : 469.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 330.0) no description available & (p40603|apg_brana : 202.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 938.0) & (original description: Putative At5g03810, Description = GDSL esterase/lipase At5g03810, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05078_887387-891893' '(gnl|cdd|58514 : 222.0) no description available & (at4g10950 : 208.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 86.7) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 416.0) & (original description: Putative PGSC0003DMG400027399, Description = SGNH hydrolase-type esterase superfamily protein, putative isoform 1, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05109_157482-160180' '(at2g30310 : 197.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30220.1); Has 3442 Blast hits to 3404 proteins in 209 species: Archae - 0; Bacteria - 309; Metazoa - 0; Fungi - 18; Plants - 3094; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 188.0) no description available & (p40603|apg_brana : 104.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 394.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05123_341538-354059' '(at1g53920 : 385.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 335.0) no description available & (p40603|apg_brana : 110.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 770.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05124_67910-72702' '(at3g16370 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G22810.1); Has 3678 Blast hits to 3640 proteins in 303 species: Archae - 0; Bacteria - 507; Metazoa - 0; Fungi - 26; Plants - 3124; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 358.0) no description available & (p40603|apg_brana : 188.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1006.0) & (original description: Putative APG, Description = GDSL esterase/lipase APG, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05230_204350-209677' '(at5g14450 : 505.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 339.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 286.0) no description available & (reliability: 1010.0) & (original description: Putative ache, Description = Acetylcholinesterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05324_394381-399921' '(at3g48460 : 246.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 235.0) no description available & (q7y1x1|est_hevbr : 107.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 492.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05674_307004-310826' '(at2g23540 : 550.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 356.0) no description available & (q7y1x1|est_hevbr : 134.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1100.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05674_308251-310850' '(at3g50400 : 147.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G23540.1); Has 3614 Blast hits to 3577 proteins in 268 species: Archae - 0; Bacteria - 447; Metazoa - 0; Fungi - 31; Plants - 3117; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|58514 : 114.0) no description available & (reliability: 294.0) & (original description: Putative SGNH, Description = GDSL esterase/lipase, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf05731_32930-36030' '(at1g28590 : 285.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 278.0) no description available & (q7y1x1|est_hevbr : 160.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 570.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06054_49736-78891' '(at1g53920 : 330.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 280.0) no description available & (q7y1x1|est_hevbr : 113.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 660.0) & (original description: Putative GLIP, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06076_151502-158872' '(gnl|cdd|58514 : 314.0) no description available & (at5g15720 : 275.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 7 (GLIP7); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 154.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 550.0) & (original description: Putative GLIP7, Description = GDSL esterase/lipase 7, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06249_295010-299061' '(at1g74460 : 549.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, hypocotyl, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G37690.1); Has 3571 Blast hits to 3529 proteins in 266 species: Archae - 0; Bacteria - 429; Metazoa - 0; Fungi - 48; Plants - 3074; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 327.0) no description available & (p40603|apg_brana : 165.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1098.0) & (original description: Putative At1g74460, Description = GDSL esterase/lipase At1g74460, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06287_17904-26356' '(at5g45920 : 352.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G62930.1); Has 723 Blast hits to 722 proteins in 270 species: Archae - 0; Bacteria - 249; Metazoa - 79; Fungi - 169; Plants - 173; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38245 : 286.0) no description available & (gnl|cdd|58515 : 248.0) no description available & (reliability: 704.0) & (original description: Putative iah1, Description = Isoamyl acetate-hydrolyzing esterase 1 homolog, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06311_217814-221035' '(at1g06990 : 169.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G24560.1); Has 3486 Blast hits to 3444 proteins in 207 species: Archae - 0; Bacteria - 314; Metazoa - 0; Fungi - 25; Plants - 3124; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|58514 : 168.0) no description available & (p40603|apg_brana : 103.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 338.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase EXL3, PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06412_294056-304289' '(at1g09390 : 367.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 273.0) no description available & (q7y1x1|est_hevbr : 212.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 734.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06584_2554-8628' '(at5g33370 : 575.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1150.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06664_52039-58291' '(at5g33370 : 552.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 349.0) no description available & (p40603|apg_brana : 167.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1104.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf06909_408549-411688' '(at1g28590 : 289.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 284.0) no description available & (q7y1x1|est_hevbr : 167.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 578.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf07441_363437-369215' '(at5g33370 : 572.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 352.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1144.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf07466_735191-740120' '(at5g03980 : 204.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 168.0) no description available & (q7y1x1|est_hevbr : 103.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 408.0) & (original description: Putative At2g27360, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf07533_384664-398385' '(at2g42990 : 427.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G04570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 364.0) no description available & (p40603|apg_brana : 192.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 854.0) & (original description: Putative At2g42990, Description = GDSL esterase/lipase At2g42990, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf07812_45365-50223' '(at1g29670 : 330.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 294.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 660.0) & (original description: Putative BnaC03g68070D, Description = BnaC03g68070D protein, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf07812_96767-100836' '(at1g29670 : 312.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 302.0) no description available & (p40603|apg_brana : 128.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 624.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08047_330985-334973' '(gnl|cdd|58514 : 303.0) no description available & (at5g55050 : 210.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 145.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 420.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08195_790050-795361' '(at5g45670 : 541.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 347.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1082.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase At1g33811, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08195_853394-858455' '(at1g29670 : 303.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 268.0) no description available & (p40603|apg_brana : 102.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 606.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08294_702315-706930' '(at2g42990 : 398.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G04570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 182.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 796.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08413_16288-24852' '(at1g28580 : 308.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 302.0) no description available & (q7y1x1|est_hevbr : 122.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 616.0) & (original description: Putative At1g28580, Description = GDSL esterase/lipase At1g28580, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08465_334896-340886' '(at5g37690 : 482.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G74460.1); Has 3491 Blast hits to 3453 proteins in 233 species: Archae - 0; Bacteria - 356; Metazoa - 0; Fungi - 50; Plants - 3074; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 350.0) no description available & (p40603|apg_brana : 162.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 964.0) & (original description: Putative At5g37690, Description = GDSL esterase/lipase At5g37690, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08670_13695-19443' '(at5g45960 : 373.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 343.0) no description available & (p40603|apg_brana : 203.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 746.0) & (original description: Putative At5g45960, Description = GDSL esterase/lipase At5g45960, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08777_285735-288844' '(at1g28590 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 290.0) no description available & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 600.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08785_71392-87824' '(gnl|cdd|58514 : 173.0) no description available & (at5g45670 : 125.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf08975_358720-364920' '(at3g11210 : 333.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 287.0) no description available & (gnl|cdd|58515 : 238.0) no description available & (reliability: 666.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf09079_206092-210749' '(gnl|cdd|58514 : 349.0) no description available & (at2g24560 : 344.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (p40603|apg_brana : 186.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 688.0) & (original description: Putative T3G21, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf09079_213625-223002' '(at2g24560 : 367.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 359.0) no description available & (p40603|apg_brana : 209.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative At2g24560, Description = GDSL esterase/lipase At2g24560, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf09127_33199-49974' '(at5g03980 : 273.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 239.0) no description available & (q7y1x1|est_hevbr : 117.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 546.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf09424_363998-368680' '(at1g75900 : 363.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 235.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 662.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf09871_59090-72043' '(at1g09390 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 307.0) no description available & (q7y1x1|est_hevbr : 263.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1006.0) & (original description: Putative At1g09390, Description = GDSL esterase/lipase At1g09390, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf11009_189302-192414' '(gnl|cdd|58514 : 282.0) no description available & (at5g03980 : 254.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 508.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_107622-110603' '(at1g29670 : 216.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 163.0) no description available & (reliability: 432.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_134385-138492' '(at1g29670 : 530.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 159.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1060.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_169792-174467' '(at5g45670 : 539.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 347.0) no description available & (p40603|apg_brana : 169.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1078.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12367_111625-116636' '(at5g33370 : 505.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1010.0) & (original description: Putative At4g28780, Description = GDSL esterase/lipase At4g28780, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12639_124480-132379' '(gnl|cdd|58514 : 294.0) no description available & (at1g29660 : 281.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (p40603|apg_brana : 85.9) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf12983_223795-226943' '(gnl|cdd|58514 : 156.0) no description available & (at1g28640 : 146.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf16114_271789-278637' '(gnl|cdd|58514 : 324.0) no description available & (at5g40990 : 318.0) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.; GDSL lipase 1 (GLIP1); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 2 (TAIR:AT1G53940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 128.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 636.0) & (original description: Putative GLIP2, Description = GDSL esterase/lipase 2, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf17701_91783-99269' '(at5g41890 : 471.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 340.0) no description available & (p40603|apg_brana : 132.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 942.0) & (original description: Putative At5g41890, Description = GDSL esterase/lipase At5g41890, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf28415_27164-32085' '(at3g48460 : 248.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 236.0) no description available & (q7y1x1|est_hevbr : 108.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 496.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf31398_21470-28196' '(at5g45960 : 310.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 282.0) no description available & (p40603|apg_brana : 180.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 620.0) & (original description: Putative Ccrd_008578, Description = Lipase, GDSL, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf31398_25939-29251' '(at5g45960 : 173.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 153.0) no description available & (p40603|apg_brana : 91.3) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 346.0) & (original description: Putative APG, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T
'26.28' 'misc.GDSL-motif lipase' 'niben101scf34748_61668-68892' '(at5g45960 : 407.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 197.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 814.0) & (original description: Putative At5g45960, Description = GDSL esterase/lipase At5g45960, PFAM = PF00657)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.3scaffold3294_65441-74912' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 448.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.3scaffold22653_26358-28810' '(at1g71500 : 119.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g71500, Description = Rieske (2Fe-2S) domain-containing protein, PFAM = PF13806)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold932_55235-179396' '(at1g32550 : 85.1) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative FdC1, Description = Putative ferredoxin, PFAM = )' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold1066_285652-293460' '(at4g21090 : 225.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 189.0) no description available & (reliability: 448.0) & (original description: Putative adxhom, Description = Ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold1548_15330-23266' '(at1g32550 : 207.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold2318_234619-252823' '(at4g05450 : 229.0) mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 458.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold2683_193068-215585' '(at4g21090 : 226.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 190.0) no description available & (reliability: 442.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold3237_105933-108385' '(at1g71500 : 118.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g71500, Description = Rieske (2Fe-2S) domain-containing protein, PFAM = PF13806)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044ctg26167358_1-4718' '(at4g21090 : 222.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 186.0) no description available & (reliability: 438.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044scf00000060ctg003_1-1491' '(at4g25650 : 171.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PTC52, Description = Protochlorophyllide-dependent translocon component 52, chloroplastic, PFAM = )' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044scf00014000ctg002_484-2113' '(at4g25650 : 194.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (gnl|cdd|58550 : 168.0) no description available & (reliability: 388.0) & (original description: Putative lls1, Description = Pheophorbide a oxygenase, PFAM = PF00355)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00327_181564-191679' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 426.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00457_330670-338598' '(at1g32550 : 165.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00480_1-4764' '(at1g71500 : 321.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 642.0) & (original description: Putative Sb03g044430, Description = Putative uncharacterized protein Sb03g044430, PFAM = PF13806)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf03046_753805-762609' '(at1g32550 : 246.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|79346 : 82.7) no description available & (reliability: 492.0) & (original description: Putative fdx1, Description = Ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf03046_756155-761614' '(at1g32550 : 163.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf05820_100333-102776' '(at4g14890 : 181.0) 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 3 (TAIR:AT2G27510.1); Has 5496 Blast hits to 5494 proteins in 1067 species: Archae - 103; Bacteria - 3665; Metazoa - 7; Fungi - 2; Plants - 612; Viruses - 5; Other Eukaryotes - 1102 (source: NCBI BLink). & (p14937|fer2_rapsa : 90.5) Ferredoxin, root R-B2 - Raphanus sativus (Radish) & (gnl|cdd|79346 : 81.6) no description available & (reliability: 362.0) & (original description: Putative PETF, Description = Ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf10092_33169-50450' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 436.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf10498_246222-255845' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 193.0) no description available & (reliability: 448.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T
'26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf11305_19473-27228' '(at4g25650 : 627.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (gnl|cdd|58550 : 212.0) no description available & (q9zwm5|cao_chlre : 84.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1254.0) & (original description: Putative PTC52, Description = Protochlorophyllide-dependent translocon component 52, chloroplastic, PFAM = PF00355;PF08417)' T
'26.31' 'misc.zinc finger' 'niben044scf00044848ctg003_2000-11270' '(at3g51390 : 346.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 108.0) no description available & (gnl|cdd|34870 : 81.2) no description available & (reliability: 692.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T
'26.31' 'misc.zinc finger' 'niben101scf01497_417137-427658' '(at3g51390 : 342.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 108.0) no description available & (gnl|cdd|34870 : 82.8) no description available & (reliability: 684.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T
'26.31' 'misc.zinc finger' 'niben101scf06916_105734-123829' '(at3g51390 : 314.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 110.0) no description available & (gnl|cdd|34870 : 90.1) no description available & (reliability: 628.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T
'27' 'RNA' '' ''
'27.1' 'RNA.processing' 'nbv0.3scaffold1288_1902-17360' '(at5g13570 : 427.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5Ã-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 267.0) no description available & (gnl|cdd|72892 : 204.0) no description available & (reliability: 854.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme 2, PFAM = PF05026;PF00293)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold2909_7478-9816' '(at5g14580 : 140.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (gnl|cdd|36285 : 84.3) no description available & (reliability: 280.0) & (original description: Putative PNP2, Description = Polyribonucleotide nucleotidyltransferase, PFAM = PF01138)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold10326_12457-24988' '(gnl|cdd|36140 : 637.0) no description available & (at1g26370 : 503.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 447.0) no description available & (reliability: 916.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF04408;PF00271;PF07717)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold12593_27047-31953' '(at1g09760 : 280.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|36857 : 249.0) no description available & (reliability: 560.0) & (original description: Putative SNRPA1, Description = U2 small nuclear ribonucleoprotein A', PFAM = PF14580)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1362.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold15497_25905-32687' '(at3g17040 : 739.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 260.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 99.3) no description available & (reliability: 1478.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T
'27.1' 'RNA.processing' 'nbv0.3scaffold15784_33944-38878' '(at3g52210 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 353.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 133.0) no description available & (gnl|cdd|66934 : 121.0) no description available & (reliability: 710.0) & (original description: Putative At3g52210, Description = S-adenosyl-L-methionine-dependent methyltransferase superfamily protein, PFAM = PF03291)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold16102_19990-32123' '(at3g13300 : 1199.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 833.0) no description available & (reliability: 2398.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold16654_5350-9666' '(at2g33320 : 228.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold22054_5104-31171' '(at3g03710 : 656.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 503.0) no description available & (gnl|cdd|36285 : 448.0) no description available & (reliability: 1312.0) & (original description: Putative pnp, Description = Polynucleotide phosphorylase, PFAM = PF03726;PF01138;PF00013)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold25116_7001-14059' '(at3g52120 : 290.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 234.0) no description available & (reliability: 580.0) & (original description: Putative SF4, Description = Splicing factor 4, PFAM = PF01585;PF01805)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold26326_590-8341' '(at1g43190 : 646.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 410.0) no description available & (reliability: 1292.0) & (original description: Putative ptb, Description = Polypyrimidine track-binding protein homologue, PFAM = PF00076;PF00076;PF13893)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold29224_6090-14835' '(at2g23350 : 660.0) polyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed.; poly(A) binding protein 4 (PAB4); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 520413 Blast hits to 486687 proteins in 21592 species: Archae - 10501; Bacteria - 294432; Metazoa - 110769; Fungi - 17969; Plants - 36260; Viruses - 34479; Other Eukaryotes - 16003 (source: NCBI BLink). & (gnl|cdd|35345 : 424.0) no description available & (gnl|cdd|64519 : 99.6) no description available & (p19683|roc4_nicsy : 82.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1320.0) & (original description: Putative PAB8, Description = Polyadenylate-binding protein 8, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold29763_3879-10119' '(at4g02840 : 162.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (gnl|cdd|38638 : 136.0) no description available & (gnl|cdd|29711 : 130.0) no description available & (reliability: 324.0) & (original description: Putative SNRPD1, Description = Small nuclear ribonucleoprotein Sm D1, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold30981_5220-8088' '(at5g01290 : 184.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 160.0) no description available & (reliability: 368.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold31967_14372-23883' '(at1g51310 : 681.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 465.0) no description available & (gnl|cdd|66710 : 436.0) no description available & (reliability: 1362.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold34338_13585-17594' '(at2g33320 : 221.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold36760_8261-12525' '(at2g33320 : 224.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold36949_2878-23975' '(at3g05040 : 1387.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 132.0) no description available & (gnl|cdd|87516 : 81.8) no description available & (reliability: 2774.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold57443_19713-22917' '(at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold65091_1-2842' '(at1g10580 : 850.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (gnl|cdd|35503 : 577.0) no description available & (gnl|cdd|29257 : 207.0) no description available & (reliability: 1700.0) & (original description: Putative CDC40, Description = Pre-mRNA-processing factor 17, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold74316_1-8255' '(at3g13300 : 660.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 472.0) no description available & (reliability: 1320.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold81907_483-4221' '(at4g15420 : 669.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 203.0) no description available & (gnl|cdd|66804 : 174.0) no description available & (reliability: 1338.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T
'27.1' 'RNA.processing' 'nbv0.3scaffold95616_924-4608' '(at3g46790 : 880.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1760.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF14432;PF13041;PF13041;PF01535;PF01535)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold86_180027-186809' '(at3g17040 : 721.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 259.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 99.3) no description available & (reliability: 1442.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T
'27.1' 'RNA.processing' 'nbv0.5scaffold112_68317-119599' '(at3g03710 : 1137.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 862.0) no description available & (gnl|cdd|36285 : 837.0) no description available & (reliability: 2274.0) & (original description: Putative pnp, Description = Polyribonucleotide nucleotidyltransferase, PFAM = PF00575;PF01138;PF01138;PF03725;PF00013)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold128_122223-127329' '(at5g55100 : 200.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 149.0) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400014387, Description = BnaC02g13350D protein, PFAM = PF01805;PF01805)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold283_877439-880212' '(at1g11650 : 146.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 84.3) no description available & (reliability: 264.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold372_302009-315666' '(at2g17580 : 251.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 115.0) no description available & (reliability: 502.0) & (original description: Putative At2g17580, Description = Putative poly(A) polymerase, PFAM = PF12627)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold505_71884-88111' '(at1g59760 : 1207.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1017.0) no description available & (gnl|cdd|34219 : 683.0) no description available & (reliability: 2414.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF00270;PF00271;PF13234)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold855_19486-26151' '(at3g13300 : 132.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 115.0) no description available & (reliability: 264.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF03478)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold873_243631-256171' '(gnl|cdd|36140 : 656.0) no description available & (at1g26370 : 500.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 463.0) no description available & (reliability: 952.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF07717;PF04408;PF00271)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold997_441740-444177' '(gnl|cdd|37785 : 122.0) no description available & (at1g60170 : 117.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 99.5) no description available & (reliability: 234.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold1108_284775-290125' '(at2g41500 : 540.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 525.0) no description available & (gnl|cdd|29257 : 250.0) no description available & (p93107|pf20_chlre : 130.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1080.0) & (original description: Putative prpf4, Description = U4/U6 small nuclear ribonucleoprotein Prp4, PFAM = PF08799;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold1328_188239-195929' '(at1g01860 : 405.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 222.0) no description available & (gnl|cdd|36038 : 219.0) no description available & (reliability: 810.0) & (original description: Putative PFC1, Description = Ribosomal RNA small subunit methyltransferase, chloroplastic, PFAM = PF00398)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold1381_159875-163062' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold1829_1-3406' '(at3g46790 : 891.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1782.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold2020_259152-313571' '(at5g44500 : 171.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Small ribonucleoprotein associated, SmB/SmN (InterPro:IPR017131), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: small nuclear ribonucleoprotein associated protein B (TAIR:AT4G20440.4); Has 60118 Blast hits to 30363 proteins in 1233 species: Archae - 62; Bacteria - 7735; Metazoa - 31237; Fungi - 6515; Plants - 7441; Viruses - 1395; Other Eukaryotes - 5733 (source: NCBI BLink). & (gnl|cdd|29704 : 135.0) no description available & (gnl|cdd|38378 : 131.0) no description available & (reliability: 342.0) & (original description: Putative SmB, Description = Small nuclear ribonucleoprotein-associated protein B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold2088_14868-17901' '(at4g14790 : 207.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 173.0) no description available & (reliability: 414.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = )' T
'27.1' 'RNA.processing' 'nbv0.5scaffold2241_185102-197344' '(at5g23690 : 605.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 373.0) no description available & (gnl|cdd|30962 : 195.0) no description available & (reliability: 1210.0) & (original description: Putative pcnB, Description = Putative poly(A) polymerase, PFAM = PF12627;PF01743)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold2264_332007-341898' '(at1g08370 : 254.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|69574 : 172.0) no description available & (gnl|cdd|38079 : 161.0) no description available & (reliability: 508.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold2291_127507-131833' '(at2g33320 : 219.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 532.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold4004_31826-41918' '(at1g51310 : 716.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 467.0) no description available & (gnl|cdd|66710 : 436.0) no description available & (reliability: 1432.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold10097_5483-9464' '(at3g46790 : 880.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1760.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF13041;PF13041;PF14432)' T
'27.1' 'RNA.processing' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'27.1' 'RNA.processing' 'niben044scf00000077ctg008_598-3624' '(at4g14790 : 207.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 174.0) no description available & (reliability: 414.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = )' T
'27.1' 'RNA.processing' 'niben044scf00000825ctg000_1662-9207' '(at4g03120 : 93.2) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 81.9) no description available & (gnl|cdd|38664 : 80.5) no description available & (reliability: 186.4) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T
'27.1' 'RNA.processing' 'niben044scf00001406ctg011_2379-6514' '(at4g15420 : 650.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 194.0) no description available & (gnl|cdd|66804 : 164.0) no description available & (reliability: 1300.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T
'27.1' 'RNA.processing' 'niben044scf00002719ctg013_1-2013' '(at1g43190 : 348.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 226.0) no description available & (reliability: 696.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding-like protein, PFAM = PF13893;PF00076)' T
'27.1' 'RNA.processing' 'niben044scf00006582ctg024_828-6997' '(at1g80670 : 422.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (gnl|cdd|35866 : 355.0) no description available & (gnl|cdd|29257 : 97.4) no description available & (reliability: 844.0) & (original description: Putative rae1, Description = mRNA export factor, PFAM = PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben044scf00006644ctg005_5549-10538' '(at5g22100 : 477.0) RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30125 : 405.0) no description available & (gnl|cdd|39183 : 344.0) no description available & (reliability: 954.0) & (original description: Putative rcl1, Description = Putative RNA 3'-terminal phosphate cyclase-like protein, PFAM = PF01137;PF05189)' T
'27.1' 'RNA.processing' 'niben044scf00007575ctg001_16479-19434' '(at1g59760 : 322.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 300.0) no description available & (gnl|cdd|87448 : 202.0) no description available & (reliability: 644.0) & (original description: Putative mtr4, Description = Superkiller viralicidic activity 2-like 2, PFAM = PF08148;PF13234)' T
'27.1' 'RNA.processing' 'niben044scf00007990ctg010_1-2012' '(at1g03530 : 179.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|69038 : 143.0) no description available & (gnl|cdd|37447 : 135.0) no description available & (reliability: 358.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T
'27.1' 'RNA.processing' 'niben044scf00008684ctg013_546-4136' '(at4g28450 : 250.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 214.0) no description available & (reliability: 500.0) & (original description: Putative sof1, Description = DDB1-and CUL4-associated factor 13, PFAM = PF00400;PF00400;PF04158)' T
'27.1' 'RNA.processing' 'niben044scf00008827ctg002_6070-10661' '(at1g14650 : 570.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35231 : 140.0) no description available & (gnl|cdd|29202 : 100.0) no description available & (reliability: 1140.0) & (original description: Putative spl1, Description = Splicing factor 3A subunit 1, PFAM = PF01805;PF01805;PF12230;PF00240)' T
'27.1' 'RNA.processing' 'niben044scf00009119ctg003_10168-14725' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben044scf00009668ctg002_3030-8914' '(at1g51310 : 582.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 378.0) no description available & (gnl|cdd|66710 : 363.0) no description available & (reliability: 1164.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T
'27.1' 'RNA.processing' 'niben044scf00011203ctg000_23374-30393' '(gnl|cdd|38670 : 130.0) no description available & (gnl|cdd|29717 : 125.0) no description available & (at1g76860 : 121.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative LSM3B, Description = Sm-like protein LSM3B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben044scf00011300ctg000_2367-9813' '(at1g28060 : 581.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 374.0) no description available & (gnl|cdd|37980 : 354.0) no description available & (reliability: 1162.0) & (original description: Putative BnaA08g18640D, Description = BnaA08g18640D protein, PFAM = PF06544;PF08572)' T
'27.1' 'RNA.processing' 'niben044scf00011860ctg005_1-2923' '(at1g65700 : 160.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649). & (gnl|cdd|36995 : 134.0) no description available & (gnl|cdd|29714 : 106.0) no description available & (reliability: 320.0) & (original description: Putative LSM8, Description = Sm-like protein LSM8, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben044scf00016950ctg000_5988-7847' '(at4g18372 : 135.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29704 : 80.6) no description available & (reliability: 270.0) & (original description: Putative snrnp, Description = Small nuclear ribonucleoprotein family protein, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben044scf00017021ctg005_7095-13745' '(at5g53180 : 385.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 233.0) no description available & (reliability: 770.0) & (original description: Putative PTB2, Description = Polypyrimidine tract-binding RNA transport protein-like, PFAM = PF00076)' T
'27.1' 'RNA.processing' 'niben044scf00017224ctg015_780-3741' '(at1g01860 : 184.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 112.0) no description available & (gnl|cdd|36038 : 89.7) no description available & (reliability: 368.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T
'27.1' 'RNA.processing' 'niben044scf00017852ctg009_1-3920' '(at1g01860 : 189.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 118.0) no description available & (gnl|cdd|36038 : 97.4) no description available & (reliability: 378.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T
'27.1' 'RNA.processing' 'niben044scf00019366ctg003_4569-10851' '(at4g03120 : 100.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38664 : 81.6) no description available & (reliability: 200.0) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T
'27.1' 'RNA.processing' 'niben044scf00019521ctg006_9865-16753' '(at3g17040 : 744.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 262.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 101.0) no description available & (reliability: 1488.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T
'27.1' 'RNA.processing' 'niben044scf00020326ctg006_3873-8217' '(at2g25290 : 573.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 484.0) no description available & (reliability: 1146.0) & (original description: Putative BnaC07g43660D, Description = BnaC07g43660D protein, PFAM = PF13181;PF00564)' T
'27.1' 'RNA.processing' 'niben044scf00022976ctg009_64-6421' '(at3g13300 : 419.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 325.0) no description available & (reliability: 838.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'niben044scf00023200ctg002_892-5980' '(at1g43190 : 338.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 219.0) no description available & (reliability: 676.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding protein, PFAM = PF13893)' T
'27.1' 'RNA.processing' 'niben044scf00023607ctg002_1-5344' '(at4g17610 : 375.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (gnl|cdd|36057 : 98.2) no description available & (reliability: 750.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T
'27.1' 'RNA.processing' 'niben044scf00024628ctg005_8340-10741' '(at4g02400 : 107.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 103.0) no description available & (gnl|cdd|37383 : 87.8) no description available & (reliability: 208.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T
'27.1' 'RNA.processing' 'niben044scf00025207ctg003_4619-10417' '(at3g52120 : 192.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 132.0) no description available & (reliability: 384.0) & (original description: Putative TCM_005922, Description = SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein isoform 4, PFAM = PF01805;PF01585)' T
'27.1' 'RNA.processing' 'niben044scf00025705ctg003_67-6190' '(at4g14790 : 457.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 388.0) no description available & (reliability: 914.0) & (original description: Putative SUV3, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF00271)' T
'27.1' 'RNA.processing' 'niben044scf00026085ctg005_11717-15938' '(at2g25290 : 675.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 453.0) no description available & (reliability: 1350.0) & (original description: Putative KK1_031626, Description = Protein unc-45 isogeny A, PFAM = PF00564)' T
'27.1' 'RNA.processing' 'niben044scf00027137ctg011_1-6513' '(at2g17580 : 181.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 140.0) no description available & (gnl|cdd|30962 : 105.0) no description available & (reliability: 362.0) & (original description: Putative At1g28090, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF01743;PF12627)' T
'27.1' 'RNA.processing' 'niben044scf00028479ctg007_2238-9601' '(at5g55100 : 277.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 245.0) no description available & (reliability: 554.0) & (original description: Putative PGSC0003DMG400014387, Description = SWAP (Suppressor-of-white-APricot)/surp domain protein, putative, PFAM = PF09750;PF01805;PF01805)' T
'27.1' 'RNA.processing' 'niben044scf00032208ctg002_1-8828' '(at1g59760 : 1073.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1023.0) no description available & (gnl|cdd|34219 : 621.0) no description available & (reliability: 2146.0) & (original description: Putative mtr4, Description = Antiviral helicase, PFAM = PF00271;PF00270;PF13234)' T
'27.1' 'RNA.processing' 'niben044scf00034552ctg000_1-4539' '(at3g14080 : 183.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 162.0) no description available & (gnl|cdd|29715 : 110.0) no description available & (reliability: 366.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben044scf00035734ctg005_2253-7600' '(at2g41500 : 576.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 564.0) no description available & (gnl|cdd|29257 : 267.0) no description available & (p93107|pf20_chlre : 128.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1152.0) & (original description: Putative LIS, Description = U4/U6 small nuclear ribonucleoprotein PRP4-like protein, PFAM = PF08799;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben044scf00039549ctg009_1-5845' '(at3g26560 : 1650.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (gnl|cdd|36140 : 1015.0) no description available & (gnl|cdd|31829 : 683.0) no description available & (reliability: 3300.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF00575;PF07717;PF04408;PF00271)' T
'27.1' 'RNA.processing' 'niben044scf00040382ctg002_1-3778' '(at2g17580 : 89.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative pcnB, Description = Putative poly(A) polymerase, PFAM = PF01743)' T
'27.1' 'RNA.processing' 'niben044scf00041800ctg000_11602-18174' '(at1g08370 : 312.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 180.0) no description available & (gnl|cdd|69574 : 173.0) no description available & (reliability: 624.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'niben044scf00045685ctg006_1791-10026' '(at4g05410 : 472.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 459.0) no description available & (gnl|cdd|29257 : 141.0) no description available & (o24076|gblp_medsa : 87.4) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 914.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben044scf00050092ctg003_7709-11874' '(at5g16860 : 494.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 968.0) & (original description: Putative crr2, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF14432)' T
'27.1' 'RNA.processing' 'niben044scf00057600ctg002_3868-9882' '(at2g23930 : 131.0) probable small nuclear ribonucleoprotein G (SNRNP-G); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G11500.1); Has 1073 Blast hits to 1073 proteins in 252 species: Archae - 104; Bacteria - 0; Metazoa - 399; Fungi - 257; Plants - 180; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (p24715|ruxg_medsa : 120.0) Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG) - Medicago sativa (Alfalfa) & (gnl|cdd|29706 : 106.0) no description available & (gnl|cdd|36991 : 99.2) no description available & (reliability: 262.0) & (original description: Putative smg1, Description = Small nuclear ribonucleoprotein G, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben044scf00058500ctg001_2996-12112' '(at5g05970 : 673.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39579 : 419.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 1346.0) & (original description: Putative NEDD1, Description = Protein NEDD1, PFAM = PF00400)' T
'27.1' 'RNA.processing' 'niben044scf00061373ctg000_1-5504' '(gnl|cdd|36809 : 382.0) no description available & (at4g25630 : 380.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85352 : 337.0) no description available & (reliability: 754.0) & (original description: Putative FIB3, Description = Putative rRNA 2'-O-methyltransferase fibrillarin 3, PFAM = PF01269)' T
'27.1' 'RNA.processing' 'niben101scf00051_31911-45531' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (p28644|roc1_spiol : 86.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 770.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf00144_259979-278977' '(at1g08370 : 253.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 158.0) no description available & (gnl|cdd|69574 : 157.0) no description available & (reliability: 506.0) & (original description: Putative Os12g0156400, Description = Dcp1-like decapping family protein, expressed, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'niben101scf00163_1945800-1949674' '(at3g46790 : 487.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 974.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041;PF13041)' T
'27.1' 'RNA.processing' 'niben101scf00246_451661-458285' '(at4g03120 : 102.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 82.7) no description available & (gnl|cdd|38664 : 82.4) no description available & (reliability: 204.0) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T
'27.1' 'RNA.processing' 'niben101scf00271_111212-116931' '(at5g22100 : 437.0) RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30125 : 408.0) no description available & (gnl|cdd|39183 : 347.0) no description available & (reliability: 874.0) & (original description: Putative rcl1, Description = Putative RNA 3'-terminal phosphate cyclase-like protein, PFAM = PF05189;PF01137)' T
'27.1' 'RNA.processing' 'niben101scf00298_270284-275560' '(at3g14080 : 139.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 119.0) no description available & (gnl|cdd|29715 : 98.3) no description available & (reliability: 278.0) & (original description: Putative LSM, Description = Small nuclear ribonucleoprotein, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00369_935597-942969' '(q43582|lsm4_tobac : 216.0) Probable U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10) - Nicotiana tabacum (Common tobacco) & (at5g27720 : 186.0) embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29710 : 163.0) no description available & (gnl|cdd|38503 : 157.0) no description available & (reliability: 372.0) & (original description: Putative lsm4, Description = U6 snRNA-associated Sm-like protein LSm4, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00381_131374-144388' '(at2g34750 : 517.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 394.0) no description available & (gnl|cdd|37645 : 292.0) no description available & (reliability: 1034.0) & (original description: Putative At2g34750, Description = Putative uncharacterized protein At2g34750, PFAM = PF05327)' T
'27.1' 'RNA.processing' 'niben101scf00393_215289-220827' '(at4g30220 : 157.0) small nuclear ribonucleoprotein F (RUXF); FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G14285.1). & (gnl|cdd|38692 : 140.0) no description available & (gnl|cdd|29709 : 127.0) no description available & (reliability: 314.0) & (original description: Putative smf1, Description = Small nuclear ribonucleoprotein F, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00481_663-9451' '(at1g43190 : 719.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 464.0) no description available & (reliability: 1438.0) & (original description: Putative ptb, Description = Polypyrimidine track-binding protein homologue, PFAM = PF00076;PF00076;PF13893;PF13893)' T
'27.1' 'RNA.processing' 'niben101scf00494_666330-692653' '(at1g22660 : 598.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT2G17580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 259.0) no description available & (gnl|cdd|30962 : 155.0) no description available & (reliability: 1196.0) & (original description: Putative CCA1, Description = TRNA nucleotidyltransferase, PFAM = PF01743)' T
'27.1' 'RNA.processing' 'niben101scf00654_216390-233807' '(at3g13300 : 1200.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 807.0) no description available & (reliability: 2400.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'niben101scf00747_726473-750088' '(at3g14080 : 142.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 131.0) no description available & (gnl|cdd|29715 : 107.0) no description available & (reliability: 284.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00774_244145-248428' '(at4g30220 : 154.0) small nuclear ribonucleoprotein F (RUXF); FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G14285.1). & (gnl|cdd|38692 : 135.0) no description available & (gnl|cdd|29709 : 123.0) no description available & (reliability: 308.0) & (original description: Putative smf1, Description = Small nuclear ribonucleoprotein F, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00801_188405-194511' '(at2g43810 : 149.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1); Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305; Bacteria - 0; Metazoa - 337; Fungi - 255; Plants - 126; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36994 : 128.0) no description available & (gnl|cdd|29713 : 120.0) no description available & (reliability: 298.0) & (original description: Putative LSM6B, Description = Sm-like protein LSM36B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf00851_59798-86128' '(at1g08370 : 303.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|69574 : 178.0) no description available & (gnl|cdd|38079 : 171.0) no description available & (reliability: 606.0) & (original description: Putative Sb02g007770, Description = Putative uncharacterized protein Sb02g007770, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'niben101scf00907_14496-20469' '(at1g14650 : 573.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35231 : 116.0) no description available & (gnl|cdd|29202 : 100.0) no description available & (reliability: 1146.0) & (original description: Putative spl1, Description = Splicing factor 3A subunit 1, PFAM = PF01805;PF01805;PF00240;PF12230)' T
'27.1' 'RNA.processing' 'niben101scf00934_172388-178692' '(at1g03330 : 172.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|38658 : 153.0) no description available & (gnl|cdd|29712 : 134.0) no description available & (reliability: 344.0) & (original description: Putative LSM2, Description = Sm-like protein LSM2, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf01037_811276-824439' '(at4g15420 : 654.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 183.0) no description available & (gnl|cdd|66804 : 155.0) no description available & (reliability: 1308.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T
'27.1' 'RNA.processing' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 564.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T
'27.1' 'RNA.processing' 'niben101scf01182_226570-239696' '(at5g23690 : 565.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 335.0) no description available & (gnl|cdd|30962 : 194.0) no description available & (reliability: 1130.0) & (original description: Putative pcnB, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF12627;PF01743)' T
'27.1' 'RNA.processing' 'niben101scf01269_426979-433787' '(at4g27000 : 389.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 748.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf01292_165152-191284' '(at1g22660 : 584.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT2G17580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 251.0) no description available & (gnl|cdd|30962 : 149.0) no description available & (reliability: 1168.0) & (original description: Putative CCA1, Description = TRNA nucleotidyltransferase, PFAM = PF01743)' T
'27.1' 'RNA.processing' 'niben101scf01368_75494-86221' '(at4g02400 : 565.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 408.0) no description available & (gnl|cdd|37383 : 193.0) no description available & (reliability: 1058.0) & (original description: Putative At4g02400, Description = U3 ribonucleoprotein family protein, PFAM = PF04615)' T
'27.1' 'RNA.processing' 'niben101scf01413_76006-81711' '(at1g10580 : 861.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (gnl|cdd|35503 : 576.0) no description available & (gnl|cdd|29257 : 206.0) no description available & (reliability: 1722.0) & (original description: Putative CDC40, Description = Pre-mRNA-processing factor 17, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben101scf01440_584097-589353' '(at4g31200 : 498.0) SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative At4g31200, Description = At4g31200, PFAM = PF01805;PF04818)' T
'27.1' 'RNA.processing' 'niben101scf01497_54001-81171' '(at2g17580 : 440.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 238.0) no description available & (gnl|cdd|30962 : 158.0) no description available & (reliability: 880.0) & (original description: Putative Os03g0131400, Description = Os03g0131400 protein, PFAM = PF12627;PF01743)' T
'27.1' 'RNA.processing' 'niben101scf01500_70831-83755' '(at4g28450 : 759.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 554.0) no description available & (gnl|cdd|29257 : 144.0) no description available & (reliability: 1518.0) & (original description: Putative DCAF13, Description = DDB1- and CUL4-associated factor 13, PFAM = PF08662;PF04158;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben101scf01500_70934-193742' '(at4g28450 : 288.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 210.0) no description available & (gnl|cdd|29257 : 88.1) no description available & (reliability: 576.0) & (original description: Putative SOF1, Description = DDB1-and CUL4-associated factor 13, PFAM = PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben101scf01543_636848-643799' '(at5g53180 : 585.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 380.0) no description available & (reliability: 1170.0) & (original description: Putative PTB, Description = Polypyrimidine tract-binding-like protein, PFAM = PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf01629_12955-21420' '(at2g36660 : 498.0) polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.; poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink). & (gnl|cdd|35345 : 370.0) no description available & (gnl|cdd|47820 : 98.8) no description available & (p19682|roc3_nicsy : 85.5) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 996.0) & (original description: Putative PAB7, Description = Polyadenylate-binding protein 7, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T
'27.1' 'RNA.processing' 'niben101scf01655_370077-380116' '(at1g01760 : 391.0) adenosine deaminases;RNA binding;RNA binding;adenosine deaminases; FUNCTIONS IN: RNA binding, adenosine deaminase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Adenosine deaminase/editase (InterPro:IPR002466); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47853 : 270.0) no description available & (gnl|cdd|37988 : 242.0) no description available & (reliability: 782.0) & (original description: Putative BnaA10g00240D, Description = BnaA10g00240D protein, PFAM = PF02137)' T
'27.1' 'RNA.processing' 'niben101scf01740_1785420-1795851' '(q43582|lsm4_tobac : 196.0) Probable U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10) - Nicotiana tabacum (Common tobacco) & (at5g27720 : 184.0) embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29710 : 163.0) no description available & (gnl|cdd|38503 : 162.0) no description available & (reliability: 368.0) & (original description: Putative lsm4, Description = U6 snRNA-associated Sm-like protein LSm4, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf01750_1382509-1393858' '(at1g08370 : 316.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 186.0) no description available & (gnl|cdd|69574 : 176.0) no description available & (reliability: 632.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'niben101scf01782_392457-415925' '(at3g09100 : 563.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 264.0) no description available & (gnl|cdd|85390 : 179.0) no description available & (reliability: 1070.0) & (original description: Putative At3g09100, Description = mRNA capping enzyme family protein, PFAM = PF01331;PF03919;PF00782)' T
'27.1' 'RNA.processing' 'niben101scf01782_407200-410068' '(at5g01290 : 181.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 158.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T
'27.1' 'RNA.processing' 'niben101scf01782_583436-589298' '(at4g02840 : 160.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (gnl|cdd|38638 : 136.0) no description available & (gnl|cdd|29711 : 129.0) no description available & (reliability: 320.0) & (original description: Putative SNRPD1, Description = Small nuclear ribonucleoprotein Sm D1, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf01938_55692-58738' '(at4g31200 : 186.0) SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At4g31200, Description = AtIV20-like protein, PFAM = PF01805)' T
'27.1' 'RNA.processing' 'niben101scf01966_265281-272164' '(at5g53180 : 591.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 390.0) no description available & (reliability: 1182.0) & (original description: Putative At5g53180, Description = Polypyrimidine tract-binding protein homolog 2, PFAM = PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf02031_879320-881631' '(at3g26560 : 111.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative pea, Description = ATP-dependent RNA helicase DHX8, PFAM = )' T
'27.1' 'RNA.processing' 'niben101scf02039_289520-292650' '(at1g04540 : 135.0) Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At1g04540, Description = T6K12.2 protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf02054_219381-241732' '(at2g33320 : 177.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf02122_105417-109460' '(at3g49142 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 910.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535;PF01535)' T
'27.1' 'RNA.processing' 'niben101scf02216_163117-168720' '(at5g26880 : 163.0) AGAMOUS-like 26; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537). & (gnl|cdd|30568 : 114.0) no description available & (reliability: 326.0) & (original description: Putative spoU, Description = Putative tRNA (cytidine(34)-2'-O)-methyltransferase, PFAM = PF00588)' T
'27.1' 'RNA.processing' 'niben101scf02216_171102-178699' '(at3g52120 : 262.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 236.0) no description available & (reliability: 524.0) & (original description: Putative SF4, Description = Splicing factor 4, PFAM = PF01805;PF01585)' T
'27.1' 'RNA.processing' 'niben101scf02293_12793-38557' '(at3g13300 : 926.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 668.0) no description available & (reliability: 1852.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'niben101scf02344_434351-437639' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf02509_1244401-1250552' '(at5g26880 : 320.0) AGAMOUS-like 26; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537). & (gnl|cdd|30568 : 191.0) no description available & (reliability: 640.0) & (original description: Putative cspR, Description = Putative tRNA (cytidine(34)-2'-O)-methyltransferase, PFAM = PF00588)' T
'27.1' 'RNA.processing' 'niben101scf02511_637776-644681' '(at5g53180 : 566.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 394.0) no description available & (reliability: 1132.0) & (original description: Putative RG9, Description = Polypyrimidine tract-binding protein, PFAM = PF13893;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf02581_530899-537577' '(at1g09760 : 306.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|36857 : 253.0) no description available & (reliability: 612.0) & (original description: Putative lea1, Description = U2 small nuclear ribonucleoprotein A, PFAM = PF14580)' T
'27.1' 'RNA.processing' 'niben101scf02601_323262-327271' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf02606_678330-683212' '(at2g33320 : 160.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf02622_938268-953275' '(at3g52210 : 479.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 426.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 139.0) no description available & (gnl|cdd|66934 : 129.0) no description available & (reliability: 958.0) & (original description: Putative At3g52210, Description = mRNA cap guanine-N7 methyltransferase 2, PFAM = PF03291)' T
'27.1' 'RNA.processing' 'niben101scf02634_469412-481658' '(at3g11500 : 130.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: probable small nuclear ribonucleoprotein G (TAIR:AT2G23930.1); Has 1287 Blast hits to 1287 proteins in 269 species: Archae - 120; Bacteria - 0; Metazoa - 486; Fungi - 285; Plants - 213; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (p24715|ruxg_medsa : 122.0) Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG) - Medicago sativa (Alfalfa) & (gnl|cdd|29706 : 107.0) no description available & (gnl|cdd|36991 : 98.8) no description available & (reliability: 260.0) & (original description: Putative smg1, Description = Small nuclear ribonucleoprotein G, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf02639_452099-459510' '(at1g28060 : 588.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 376.0) no description available & (gnl|cdd|37980 : 358.0) no description available & (reliability: 1176.0) & (original description: Putative PRP3, Description = U4/U6 small nuclear ribonucleoprotein PRP3, PFAM = PF06544;PF08572)' T
'27.1' 'RNA.processing' 'niben101scf02653_429310-449894' '(at5g05970 : 672.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39579 : 414.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 1344.0) & (original description: Putative NEDD1, Description = Protein NEDD1, PFAM = PF00400)' T
'27.1' 'RNA.processing' 'niben101scf02706_288111-292412' '(at2g25290 : 572.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 477.0) no description available & (reliability: 1144.0) & (original description: Putative BnaC07g43660D, Description = BnaC07g43660D protein, PFAM = PF00564;PF13181)' T
'27.1' 'RNA.processing' 'niben101scf02864_938742-951176' '(at1g20580 : 191.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1253 Blast hits to 1253 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 480; Fungi - 336; Plants - 223; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|38382 : 168.0) no description available & (gnl|cdd|29708 : 131.0) no description available & (reliability: 382.0) & (original description: Putative SMD3B, Description = Small nuclear ribonucleoprotein SmD3b, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf02914_96378-98902' '(gnl|cdd|37785 : 127.0) no description available & (at1g60170 : 126.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 93.0) no description available & (reliability: 252.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T
'27.1' 'RNA.processing' 'niben101scf02922_320974-324695' '(at2g02980 : 447.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 39959 Blast hits to 14548 proteins in 281 species: Archae - 3; Bacteria - 7; Metazoa - 132; Fungi - 233; Plants - 38891; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 828.0) & (original description: Putative crr2, Description = Organelle transcript processing 82, PFAM = PF13041;PF13041;PF14432;PF01535;PF01535)' T
'27.1' 'RNA.processing' 'niben101scf03098_38816-42693' '(at2g45350 : 705.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-E subfamily) with 11 pentatricopeptide (PPR) repeats. The protein is involved in RNA editing of the initiation codon of ndhD in the chloroplast.; CHLORORESPIRATORY REDUCTION 4 (CRR4); INVOLVED IN: mRNA modification; LOCATED IN: chloroplast, vacuole; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 36388 Blast hits to 13274 proteins in 208 species: Archae - 0; Bacteria - 3; Metazoa - 67; Fungi - 16; Plants - 35908; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1410.0) & (original description: Putative CRR4, Description = Pentatricopeptide repeat-containing protein At2g45350, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535;PF01535)' T
'27.1' 'RNA.processing' 'niben101scf03114_1006887-1012954' '(at4g25630 : 446.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36809 : 440.0) no description available & (gnl|cdd|85352 : 392.0) no description available & (reliability: 886.0) & (original description: Putative MED36B, Description = Probable mediator of RNA polymerase II transcription subunit 36b, PFAM = PF01269)' T
'27.1' 'RNA.processing' 'niben101scf03221_322817-330082' '(at2g18740 : 144.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT4G30330.1); Has 429 Blast hits to 429 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 172; Fungi - 98; Plants - 81; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36985 : 135.0) no description available & (gnl|cdd|29705 : 129.0) no description available & (reliability: 288.0) & (original description: Putative SNRPE, Description = Small nuclear ribonucleoprotein E, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf03223_161613-201867' '(at4g34110 : 654.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 443.0) no description available & (gnl|cdd|31068 : 103.0) no description available & (p19683|roc4_nicsy : 92.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1308.0) & (original description: Putative Pabpc4, Description = Polyadenylate-binding protein, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf03227_139266-261171' '(at3g03710 : 1151.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 864.0) no description available & (gnl|cdd|36285 : 842.0) no description available & (reliability: 2302.0) & (original description: Putative pnp, Description = Polynucleotide phosphorylase, PFAM = PF00013;PF03725;PF01138;PF01138;PF00575)' T
'27.1' 'RNA.processing' 'niben101scf03405_507267-511282' '(at3g46790 : 897.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1794.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF13041;PF13041;PF14432)' T
'27.1' 'RNA.processing' 'niben101scf03410_118469-133705' '(gnl|cdd|38670 : 131.0) no description available & (gnl|cdd|29717 : 126.0) no description available & (at1g76860 : 123.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative LSM3B, Description = Sm-like protein LSM3B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf03469_518113-533826' '(at4g14790 : 720.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 595.0) no description available & (reliability: 1440.0) & (original description: Putative SUV3, Description = ATP-dependent RNA helicase SUV3, mitochondrial, PFAM = PF00271;PF12513)' T
'27.1' 'RNA.processing' 'niben101scf03481_94883-105799' '(at2g36660 : 530.0) polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.; poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink). & (gnl|cdd|35345 : 353.0) no description available & (gnl|cdd|64519 : 93.1) no description available & (p28644|roc1_spiol : 87.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1060.0) & (original description: Putative PAB7, Description = Polyadenylate-binding protein 7, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T
'27.1' 'RNA.processing' 'niben101scf03526_198627-202891' '(at2g33320 : 199.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T
'27.1' 'RNA.processing' 'niben101scf03597_1121-7995' '(at5g55100 : 277.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 247.0) no description available & (reliability: 554.0) & (original description: Putative PGSC0003DMG400014387, Description = Splicing factor, suppressor of white-apricot-like protein, PFAM = PF01805;PF01805;PF09750)' T
'27.1' 'RNA.processing' 'niben101scf03673_473301-493332' '(at2g17580 : 408.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 227.0) no description available & (gnl|cdd|30962 : 159.0) no description available & (reliability: 816.0) & (original description: Putative Os03g0131400, Description = Os03g0131400 protein, PFAM = PF12627;PF01743)' T
'27.1' 'RNA.processing' 'niben101scf03735_429929-438597' '(at1g20580 : 191.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1253 Blast hits to 1253 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 480; Fungi - 336; Plants - 223; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|38382 : 168.0) no description available & (gnl|cdd|29708 : 131.0) no description available & (reliability: 382.0) & (original description: Putative v1g86522, Description = Predicted protein, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf03751_115873-122163' '(at4g34110 : 620.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 433.0) no description available & (gnl|cdd|47687 : 90.3) no description available & (p28644|roc1_spiol : 82.4) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1240.0) & (original description: Putative APP1, Description = PABP, PFAM = PF00076;PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf03965_1535-25320' '(at3g09100 : 828.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 343.0) no description available & (gnl|cdd|85390 : 229.0) no description available & (reliability: 1556.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF03919;PF01331;PF00782)' T
'27.1' 'RNA.processing' 'niben101scf04007_261746-267860' '(at1g49760 : 806.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (gnl|cdd|35345 : 439.0) no description available & (gnl|cdd|64519 : 104.0) no description available & (p28644|roc1_spiol : 89.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1612.0) & (original description: Putative PAB4, Description = Polyadenylate-binding protein 4, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T
'27.1' 'RNA.processing' 'niben101scf04119_127530-138733' '(at1g59760 : 1432.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1351.0) no description available & (gnl|cdd|34219 : 771.0) no description available & (reliability: 2864.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF00271;PF13234;PF00270)' T
'27.1' 'RNA.processing' 'niben101scf04217_1155676-1158410' '(at5g08510 : 169.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400024200, Description = JMS10C05.1 protein, PFAM = PF13041)' T
'27.1' 'RNA.processing' 'niben101scf04233_6866-17045' '(at5g46420 : 569.0) 16S rRNA processing protein RimM family; FUNCTIONS IN: ribosome binding, nucleotidyltransferase activity; INVOLVED IN: metabolic process, rRNA processing, ribosome biogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PRC-barrel (InterPro:IPR007903), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618), RimM protein (InterPro:IPR002676), 16S rRNA processing protein RimM (InterPro:IPR011961); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80530 : 167.0) no description available & (gnl|cdd|37599 : 136.0) no description available & (reliability: 1138.0) & (original description: Putative rimM, Description = Ribosome maturation factor RimM, PFAM = PF01782;PF05239)' T
'27.1' 'RNA.processing' 'niben101scf04292_1374709-1389671' '(at2g03870 : 158.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: U6 snRNA-associated Sm-like protein LSm7 (InterPro:IPR017132), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: probable small nuclear ribonucleoprotein G (TAIR:AT2G23930.1); Has 1450 Blast hits to 1450 proteins in 289 species: Archae - 222; Bacteria - 0; Metazoa - 489; Fungi - 323; Plants - 216; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|36992 : 147.0) no description available & (gnl|cdd|29716 : 127.0) no description available & (reliability: 316.0) & (original description: Putative LSM7, Description = Sm-like protein LSM7, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf04396_108630-125986' '(at3g05040 : 1399.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 137.0) no description available & (gnl|cdd|87516 : 100.0) no description available & (reliability: 2798.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T
'27.1' 'RNA.processing' 'niben101scf04403_33382-47713' '(gnl|cdd|36142 : 565.0) no description available & (at1g26370 : 504.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 440.0) no description available & (reliability: 914.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF00271;PF07717;PF04408)' T
'27.1' 'RNA.processing' 'niben101scf04558_131357-135215' '(at1g65700 : 161.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649). & (gnl|cdd|36995 : 135.0) no description available & (gnl|cdd|29714 : 107.0) no description available & (reliability: 322.0) & (original description: Putative LSM8, Description = Sm-like protein LSM8, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf04989_104617-122361' '(at5g53770 : 535.0) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleic acid binding, nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT4G00060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37117 : 295.0) no description available & (gnl|cdd|34857 : 197.0) no description available & (reliability: 1070.0) & (original description: Putative BnaC09g30200D, Description = BnaC09g30200D protein, PFAM = PF01909;PF03828)' T
'27.1' 'RNA.processing' 'niben101scf05057_132685-138486' '(at1g22760 : 600.0) Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.; poly(A) binding protein 3 (PAB3); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A)-binding protein 5 (TAIR:AT1G71770.2); Has 52215 Blast hits to 23458 proteins in 902 species: Archae - 22; Bacteria - 3112; Metazoa - 26727; Fungi - 6853; Plants - 9433; Viruses - 0; Other Eukaryotes - 6068 (source: NCBI BLink). & (gnl|cdd|35345 : 406.0) no description available & (gnl|cdd|31068 : 107.0) no description available & (p19683|roc4_nicsy : 88.2) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1200.0) & (original description: Putative PAB5, Description = Polyadenylate-binding protein 5, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T
'27.1' 'RNA.processing' 'niben101scf05060_762985-770546' '(at3g01150 : 575.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; POLYPYRIMIDINE TRACT-BINDING (PTB); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 2 (TAIR:AT5G53180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36404 : 358.0) no description available & (reliability: 1150.0) & (original description: Putative PTB, Description = Polypyrimidine tract-binding protein homolog 1, PFAM = PF13893;PF13893;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf05071_88972-95218' '(at3g62840 : 181.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G47640.3); Has 794 Blast hits to 794 proteins in 230 species: Archae - 2; Bacteria - 0; Metazoa - 329; Fungi - 181; Plants - 143; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29707 : 155.0) no description available & (gnl|cdd|38669 : 142.0) no description available & (reliability: 362.0) & (original description: Putative smd2, Description = Small nuclear ribonucleoprotein Sm D2, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf05233_76265-94933' '(at4g03120 : 97.8) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 81.5) no description available & (gnl|cdd|38664 : 80.5) no description available & (reliability: 195.6) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T
'27.1' 'RNA.processing' 'niben101scf05283_26003-34441' '(at4g05410 : 481.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 457.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (o24076|gblp_medsa : 87.0) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 940.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben101scf05402_184671-195661' '(at1g03530 : 224.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|37447 : 178.0) no description available & (gnl|cdd|69038 : 166.0) no description available & (reliability: 448.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T
'27.1' 'RNA.processing' 'niben101scf05458_97915-101372' '(at1g50270 : 301.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 37475 Blast hits to 13706 proteins in 234 species: Archae - 0; Bacteria - 8; Metazoa - 62; Fungi - 67; Plants - 36828; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 564.0) & (original description: Putative PGSC0003DMG400008944, Description = Putative uncharacterized protein Sb06g020256, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T
'27.1' 'RNA.processing' 'niben101scf05467_504507-507599' '(at4g34110 : 361.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 195.0) no description available & (gnl|cdd|47687 : 87.6) no description available & (reliability: 722.0) & (original description: Putative pabp1, Description = PABP, PFAM = PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf05697_256333-298876' '(q6k833|mces2_orysa : 130.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (at3g52210 : 119.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At3g52210, Description = S-adenosyl-L-methionine-dependent methyltransferase superfamily protein, PFAM = PF03291)' T
'27.1' 'RNA.processing' 'niben101scf05697_256583-265454' '(at3g52210 : 434.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 384.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 127.0) no description available & (gnl|cdd|66934 : 118.0) no description available & (reliability: 868.0) & (original description: Putative At3g52210, Description = mRNA cap guanine-N7 methyltransferase 2, PFAM = PF03291)' T
'27.1' 'RNA.processing' 'niben101scf05764_448597-457358' '(at5g66360 : 355.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36038 : 254.0) no description available & (gnl|cdd|30380 : 218.0) no description available & (reliability: 710.0) & (original description: Putative DIM1B, Description = Ribosomal RNA small subunit methyltransferase, mitochondrial, PFAM = PF00398)' T
'27.1' 'RNA.processing' 'niben101scf05767_19296-27688' '(at5g23690 : 586.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 365.0) no description available & (gnl|cdd|30962 : 193.0) no description available & (reliability: 1172.0) & (original description: Putative At5g23690, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF01743;PF12627)' T
'27.1' 'RNA.processing' 'niben101scf06087_459921-465736' '(at1g76860 : 149.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|38670 : 130.0) no description available & (gnl|cdd|29717 : 126.0) no description available & (reliability: 298.0) & (original description: Putative lsm3, Description = Probable U6 snRNA-associated Sm-like protein LSm3, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf06157_210825-217217' '(gnl|cdd|37785 : 613.0) no description available & (at1g60170 : 532.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|31687 : 207.0) no description available & (reliability: 1064.0) & (original description: Putative spl5, Description = U4/U6 small nuclear ribonucleoprotein, PFAM = PF01798;PF09785)' T
'27.1' 'RNA.processing' 'niben101scf06183_496000-498976' '(at1g14650 : 154.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29202 : 100.0) no description available & (reliability: 308.0) & (original description: Putative dl3830c, Description = Putative splicing factor 3A subunit 1, PFAM = PF00240)' T
'27.1' 'RNA.processing' 'niben101scf06344_145269-155387' '(at4g34110 : 629.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 427.0) no description available & (gnl|cdd|64519 : 103.0) no description available & (p19683|roc4_nicsy : 82.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1258.0) & (original description: Putative PAB8, Description = Polyadenylate-binding protein 8, PFAM = PF00076;PF00076;PF00076;PF00076;PF00076;PF00658)' T
'27.1' 'RNA.processing' 'niben101scf06404_48937-61109' '(at2g45620 : 617.0) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1962 Blast hits to 1846 proteins in 232 species: Archae - 0; Bacteria - 9; Metazoa - 921; Fungi - 372; Plants - 185; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|34857 : 182.0) no description available & (gnl|cdd|37488 : 175.0) no description available & (reliability: 1234.0) & (original description: Putative URT1, Description = UTP:RNA uridylyltransferase 1, PFAM = PF03828;PF01909)' T
'27.1' 'RNA.processing' 'niben101scf07155_410371-413265' '(at1g43190 : 134.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 98.2) no description available & (reliability: 268.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding-like protein, PFAM = )' T
'27.1' 'RNA.processing' 'niben101scf07227_257238-264464' '(at1g28060 : 582.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 373.0) no description available & (gnl|cdd|37980 : 353.0) no description available & (reliability: 1164.0) & (original description: Putative PRP3, Description = U4/U6 small nuclear ribonucleoprotein PRP3, PFAM = PF08572;PF06544)' T
'27.1' 'RNA.processing' 'niben101scf07400_19761-36915' '(at1g59760 : 1389.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1294.0) no description available & (gnl|cdd|34219 : 749.0) no description available & (reliability: 2778.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF13234;PF00271;PF00270)' T
'27.1' 'RNA.processing' 'niben101scf07493_370700-377462' '(at1g49760 : 756.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (gnl|cdd|35345 : 434.0) no description available & (gnl|cdd|64519 : 105.0) no description available & (p28644|roc1_spiol : 84.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1512.0) & (original description: Putative PAB3, Description = Polyadenylate-binding protein 3, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf07728_183266-185961' '(at5g13830 : 306.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding, RNA methyltransferase activity; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: 23S ribosomal RNA methyltransferase (InterPro:IPR016448), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36314 : 209.0) no description available & (gnl|cdd|30641 : 139.0) no description available & (reliability: 612.0) & (original description: Putative ftsJ, Description = FtsJ, PFAM = PF01728)' T
'27.1' 'RNA.processing' 'niben101scf07740_11240-17281' '(at3g26560 : 1659.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (gnl|cdd|36140 : 1016.0) no description available & (gnl|cdd|31829 : 682.0) no description available & (reliability: 3318.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF04408;PF00271;PF07717;PF00575)' T
'27.1' 'RNA.processing' 'niben101scf08142_17739-26831' '(at5g20040 : 569.0) Encodes tRNA isopentenyltransferase AtIPT9.; isopentenyltransferase 9 (IPT9); FUNCTIONS IN: tRNA dimethylallyltransferase activity, ATP binding; INVOLVED IN: tRNA processing, cytokinin biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA delta(2)-isopentenylpyrophosphate transferase (InterPro:IPR018022), tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 1 (TAIR:AT1G68460.1). & (gnl|cdd|80505 : 280.0) no description available & (gnl|cdd|36598 : 242.0) no description available & (reliability: 1138.0) & (original description: Putative IPT9, Description = tRNA dimethylallyltransferase 9, PFAM = PF01715)' T
'27.1' 'RNA.processing' 'niben101scf08355_339737-345796' '(at4g38020 : 379.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 12174 Blast hits to 12170 proteins in 2688 species: Archae - 7; Bacteria - 9680; Metazoa - 153; Fungi - 96; Plants - 106; Viruses - 0; Other Eukaryotes - 2132 (source: NCBI BLink). & (gnl|cdd|37717 : 249.0) no description available & (gnl|cdd|30912 : 151.0) no description available & (reliability: 758.0) & (original description: Putative At4g38020, Description = At4g38020, PFAM = PF00588)' T
'27.1' 'RNA.processing' 'niben101scf08390_409131-413241' '(at3g19330 : 225.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G19250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At3g19330, Description = UPF0496 protein At3g19330, PFAM = PF05055)' T
'27.1' 'RNA.processing' 'niben101scf08515_100534-120630' '(at1g08370 : 311.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 181.0) no description available & (gnl|cdd|69574 : 173.0) no description available & (reliability: 622.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T
'27.1' 'RNA.processing' 'niben101scf08649_38319-41126' '(at2g34750 : 116.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 89.7) no description available & (gnl|cdd|37645 : 87.7) no description available & (reliability: 232.0) & (original description: Putative glysoja_014844, Description = RNA polymerase I-specific transcription initiation factor RRN3, PFAM = PF05327)' T
'27.1' 'RNA.processing' 'niben101scf08863_221206-225466' '(at5g15390 : 406.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 11780 Blast hits to 11778 proteins in 2508 species: Archae - 10; Bacteria - 9274; Metazoa - 151; Fungi - 61; Plants - 151; Viruses - 0; Other Eukaryotes - 2133 (source: NCBI BLink). & (gnl|cdd|36056 : 184.0) no description available & (gnl|cdd|84887 : 136.0) no description available & (reliability: 812.0) & (original description: Putative rlmB, Description = 23S rRNA (Guanosine-2'-O-)-methyltransferase, PFAM = PF00588)' T
'27.1' 'RNA.processing' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1370.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'27.1' 'RNA.processing' 'niben101scf08975_349623-358045' '(at3g20650 : 622.0) mRNA capping enzyme family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: mRNA capping; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: mRNA (guanine-N(7))-methyltransferase (InterPro:IPR016899), mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G52210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6z9u7|mces1_orysa : 555.0) mRNA cap guanine-N7 methyltransferase 1 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 1) (mRNA cap methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|37186 : 427.0) no description available & (gnl|cdd|66934 : 346.0) no description available & (reliability: 1244.0) & (original description: Putative pcm1, Description = mRNA cap guanine-N7 methyltransferase, PFAM = PF03291)' T
'27.1' 'RNA.processing' 'niben101scf09123_291572-315362' '(at3g09100 : 861.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 349.0) no description available & (gnl|cdd|85390 : 238.0) no description available & (reliability: 1650.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF01331;PF03919;PF00782)' T
'27.1' 'RNA.processing' 'niben101scf09234_397559-434042' '(at3g05040 : 1439.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 135.0) no description available & (gnl|cdd|87516 : 99.5) no description available & (reliability: 2878.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T
'27.1' 'RNA.processing' 'niben101scf10065_111013-121725' '(at2g34750 : 509.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 389.0) no description available & (gnl|cdd|37645 : 290.0) no description available & (reliability: 1018.0) & (original description: Putative At1g30590, Description = RNA polymerase I specific transcription initiation factor RRN3 protein, PFAM = PF05327)' T
'27.1' 'RNA.processing' 'niben101scf10189_292719-298565' '(at5g48870 : 154.0) SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes.; SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36986 : 136.0) no description available & (gnl|cdd|29719 : 128.0) no description available & (reliability: 308.0) & (original description: Putative LSM5, Description = Sm-like protein LSM5, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf10333_64731-71839' '(at1g03530 : 231.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|37447 : 171.0) no description available & (gnl|cdd|69038 : 165.0) no description available & (reliability: 462.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T
'27.1' 'RNA.processing' 'niben101scf11009_27210-31637' '(at3g09650 : 869.0) RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.; HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1); Has 43769 Blast hits to 13527 proteins in 285 species: Archae - 3; Bacteria - 26; Metazoa - 343; Fungi - 654; Plants - 41314; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1738.0) & (original description: Putative HCF152, Description = Pentatricopeptide repeat-containing protein At3g09650, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF12854;PF13812;PF01535)' T
'27.1' 'RNA.processing' 'niben101scf11084_378003-382541' '(at2g41500 : 577.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 561.0) no description available & (gnl|cdd|29257 : 268.0) no description available & (p93107|pf20_chlre : 128.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1154.0) & (original description: Putative LIS, Description = U4/U6 small nuclear ribonucleoprotein PRP4-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08799)' T
'27.1' 'RNA.processing' 'niben101scf11303_128675-148002' '(at5g23080 : 764.0) Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1.; TOUGH (TGH); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: multicellular organismal development, phloem or xylem histogenesis, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1604 (InterPro:IPR011666), SWAP/Surp (InterPro:IPR000061); Has 34900 Blast hits to 18983 proteins in 949 species: Archae - 12; Bacteria - 1329; Metazoa - 18979; Fungi - 3127; Plants - 2236; Viruses - 165; Other Eukaryotes - 9052 (source: NCBI BLink). & (gnl|cdd|37349 : 437.0) no description available & (gnl|cdd|71154 : 115.0) no description available & (reliability: 1528.0) & (original description: Putative TGH, Description = G patch domain-containing protein TGH, PFAM = PF01805;PF07713)' T
'27.1' 'RNA.processing' 'niben101scf11312_168534-173892' '(at3g14080 : 186.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 158.0) no description available & (gnl|cdd|29715 : 107.0) no description available & (reliability: 372.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf11312_170626-173206' '(at3g14080 : 127.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 125.0) no description available & (gnl|cdd|29715 : 91.0) no description available & (reliability: 254.0) & (original description: Putative lsm1, Description = U6 snRNA-associated Sm-like protein LSm1, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf11779_203592-213906' '(at1g80670 : 598.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (gnl|cdd|35866 : 483.0) no description available & (gnl|cdd|29257 : 124.0) no description available & (reliability: 1196.0) & (original description: Putative RAE1, Description = Protein RAE1, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.1' 'RNA.processing' 'niben101scf11884_67457-75014' '(at5g11010 : 470.0) Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37961 : 192.0) no description available & (gnl|cdd|87453 : 145.0) no description available & (reliability: 940.0) & (original description: Putative At5g11010, Description = Polynucleotide 5'-hydroxyl-kinase NOL9, PFAM = PF16575)' T
'27.1' 'RNA.processing' 'niben101scf13260_22463-24813' '(at4g18372 : 141.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29704 : 87.2) no description available & (reliability: 282.0) & (original description: Putative snrnp, Description = Small nuclear ribonucleoprotein family protein, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf13644_54612-57049' '(gnl|cdd|37785 : 122.0) no description available & (at1g60170 : 118.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 100.0) no description available & (reliability: 236.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T
'27.1' 'RNA.processing' 'niben101scf13762_169389-175939' '(at4g27000 : 390.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 92.0) no description available & (p19683|roc4_nicsy : 82.8) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 742.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf14297_166049-171132' '(at4g34730 : 228.0) ribosome-binding factor A family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome-binding factor A, conserved site (InterPro:IPR020053), K homology-like, alpha/beta (InterPro:IPR015946), Ribosome-binding factor A (InterPro:IPR000238); Has 4827 Blast hits to 4826 proteins in 1979 species: Archae - 0; Bacteria - 4129; Metazoa - 5; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 652 (source: NCBI BLink). & (gnl|cdd|80696 : 111.0) no description available & (reliability: 456.0) & (original description: Putative rbfA, Description = Ribosome-binding factor A, PFAM = PF02033)' T
'27.1' 'RNA.processing' 'niben101scf15538_46652-62763' '(at4g17610 : 205.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (gnl|cdd|36057 : 80.1) no description available & (reliability: 410.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T
'27.1' 'RNA.processing' 'niben101scf15538_67240-71037' '(at4g17610 : 117.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T
'27.1' 'RNA.processing' 'niben101scf15962_111937-119915' '(at1g01860 : 284.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 152.0) no description available & (gnl|cdd|36038 : 148.0) no description available & (reliability: 568.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T
'27.1' 'RNA.processing' 'niben101scf17164_114964-133927' '(at5g14580 : 1184.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (gnl|cdd|36285 : 910.0) no description available & (gnl|cdd|83994 : 813.0) no description available & (reliability: 2368.0) & (original description: Putative PNP2, Description = Polyribonucleotide nucleotidyltransferase 2, mitochondrial, PFAM = PF03726;PF01138;PF01138;PF00575;PF03725)' T
'27.1' 'RNA.processing' 'niben101scf18129_116729-121613' '(at2g40650 : 322.0) PRP38 family protein; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT5G16780.1); Has 71927 Blast hits to 24591 proteins in 1125 species: Archae - 74; Bacteria - 21911; Metazoa - 26638; Fungi - 6334; Plants - 3978; Viruses - 317; Other Eukaryotes - 12675 (source: NCBI BLink). & (gnl|cdd|38100 : 264.0) no description available & (gnl|cdd|86306 : 176.0) no description available & (reliability: 644.0) & (original description: Putative v1g41962, Description = Predicted protein, PFAM = PF12871;PF03371)' T
'27.1' 'RNA.processing' 'niben101scf19059_1672-8023' '(at4g02400 : 110.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = U3 small nucleolar RNA-associated protein, putative, PFAM = PF04615)' T
'27.1' 'RNA.processing' 'niben101scf19059_3453-6385' '(gnl|cdd|68196 : 104.0) no description available & (at4g02400 : 103.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|37383 : 87.8) no description available & (reliability: 202.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T
'27.1' 'RNA.processing' 'niben101scf20914_111932-119875' '(at1g03330 : 173.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|38658 : 151.0) no description available & (gnl|cdd|29712 : 132.0) no description available & (reliability: 346.0) & (original description: Putative LSM2, Description = Sm-like protein LSM2, PFAM = PF01423)' T
'27.1' 'RNA.processing' 'niben101scf21107_14453-33315' '(at3g13300 : 1266.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 818.0) no description available & (reliability: 2532.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T
'27.1' 'RNA.processing' 'niben101scf26315_9196-29343' '(at5g13570 : 439.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5Ã-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 268.0) no description available & (gnl|cdd|72892 : 206.0) no description available & (reliability: 878.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme subunit 2, PFAM = PF00293;PF05026)' T
'27.1' 'RNA.processing' 'niben101scf38001_2407-5249' '(at1g11650 : 219.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative dbdA, Description = Nuclear acid binding protein, putative, PFAM = PF00076;PF00076)' T
'27.1' 'RNA.processing' 'niben101scf39490_13956-21191' '(at1g51310 : 718.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 465.0) no description available & (gnl|cdd|66710 : 438.0) no description available & (reliability: 1436.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold1505_83211-93375' '(gnl|cdd|37464 : 231.0) no description available & (at1g60200 : 204.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF01480;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold6269_102878-110504' '(at1g02840 : 246.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 492.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold6918_33528-46529' '(at4g21660 : 642.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 415.0) no description available & (gnl|cdd|34781 : 242.0) no description available & (reliability: 1284.0) & (original description: Putative SF3B2, Description = Splicing factor 3B subunit 2, PFAM = PF04037;PF04046)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold7591_25719-30382' '(at5g51300 : 682.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 271.0) no description available & (gnl|cdd|29005 : 165.0) no description available & (reliability: 1364.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF00076;PF00013;PF16275)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold11392_1043-10403' '(at1g60900 : 619.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 426.0) no description available & (reliability: 1238.0) & (original description: Putative U2AF2, Description = Splicing factor U2AF 65 kDa subunit, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold18882_26455-33910' '(at2g30260 : 285.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 257.0) no description available & (reliability: 570.0) & (original description: Putative U2B'', Description = U2 small nuclear ribonucleoprotein B'', PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold18882_27539-31332' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 130.0) no description available & (reliability: 298.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold27151_15032-20163' '(at2g37340 : 181.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00076;PF00098;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold31408_6531-15719' '(at3g55200 : 2266.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|37109 : 1596.0) no description available & (gnl|cdd|66828 : 230.0) no description available & (reliability: 4532.0) & (original description: Putative Sf3b3, Description = Splicing factor 3B subunit 3, PFAM = PF03178;PF10433)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold37635_7222-18858' '(at3g19840 : 191.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 108.0) no description available & (reliability: 382.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF00397)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold40897_7545-18890' '(at1g04510 : 790.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 588.0) no description available & (gnl|cdd|29257 : 172.0) no description available & (p93107|pf20_chlre : 89.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1556.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF00400;PF00400;PF00400;PF08606;PF04564)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold41697_10819-16766' '(at5g37370 : 399.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 292.0) no description available & (gnl|cdd|86306 : 127.0) no description available & (reliability: 798.0) & (original description: Putative ATSRL1, Description = At5g37370, PFAM = PF03371)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold48359_9272-14450' '(at5g42820 : 274.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 253.0) no description available & (reliability: 548.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold56282_3590-13037' '(at1g10320 : 343.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 164.0) no description available & (reliability: 686.0) & (original description: Putative U2AFM, Description = U2AFM, PFAM = PF00642;PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold58139_163-12462' '(at5g64200 : 171.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 91.8) no description available & (reliability: 342.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold59177_1-4036' '(at1g80070 : 703.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 672.0) no description available & (gnl|cdd|34777 : 454.0) no description available & (reliability: 1406.0) & (original description: Putative prp8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF08083;PF08082)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold65617_216-10383' '(at3g19840 : 309.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 184.0) no description available & (reliability: 618.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF01846;PF01846;PF01846)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold66173_3819-9864' '(at2g18510 : 418.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 341.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.8) no description available & (reliability: 836.0) & (original description: Putative sf3b4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold68068_2122-7290' '(at5g37370 : 277.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 219.0) no description available & (gnl|cdd|86306 : 107.0) no description available & (reliability: 554.0) & (original description: Putative Os05g0178900, Description = Os05g0178900 protein, PFAM = PF03371)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold75864_264-4234' '(at2g24590 : 146.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold85332_2410-6200' '(at3g27550 : 369.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 154.0) no description available & (gnl|cdd|85815 : 91.7) no description available & (reliability: 738.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold16_500816-505884' '(at4g03430 : 1345.0) Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.; EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN: binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold, response to abiotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Ubiquitin supergroup (InterPro:IPR019955), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has 3874 Blast hits to 2098 proteins in 386 species: Archae - 98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants - 656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). & (gnl|cdd|35716 : 1240.0) no description available & (gnl|cdd|69918 : 205.0) no description available & (reliability: 2690.0) & (original description: Putative STA1, Description = Protein STABILIZED1, PFAM = PF13181;PF06424;PF14559)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold284_816407-827516' '(at1g17370 : 571.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 1142.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold304_141456-152875' '(at1g80070 : 1901.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 1854.0) no description available & (gnl|cdd|34777 : 1449.0) no description available & (reliability: 3802.0) & (original description: Putative Prpf8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF08084;PF08082;PF08083;PF10598;PF12134;PF10596;PF01398)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold505_61051-70738' '(at1g10320 : 345.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 164.0) no description available & (reliability: 690.0) & (original description: Putative u2AF, Description = U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2, PFAM = PF00642;PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold542_393034-408342' '(at3g13570 : 143.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 81.4) no description available & (reliability: 286.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold634_498073-508371' '(at1g60900 : 627.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 437.0) no description available & (reliability: 1254.0) & (original description: Putative U2af50, Description = Splicing factor U2AF 50 kDa subunit, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold842_386649-397783' '(at1g09140 : 221.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 81.0) no description available & (reliability: 442.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1122_240094-245818' '(at3g49430 : 236.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 187.0) no description available & (reliability: 472.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1445_136438-151844' '(at2g33340 : 776.0) Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3B (MAC3B); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: defense response to bacterium; LOCATED IN: cell wall, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3A (TAIR:AT1G04510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 563.0) no description available & (gnl|cdd|29257 : 167.0) no description available & (p93107|pf20_chlre : 91.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1552.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF08606)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1674_184999-216053' '(at3g19840 : 568.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 403.0) no description available & (gnl|cdd|34707 : 94.1) no description available & (reliability: 1136.0) & (original description: Putative MED35C, Description = Pre-mRNA-processing protein 40C, PFAM = PF01846;PF01846;PF01846;PF01846;PF01846;PF00397)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1885_296738-306698' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 208.0) no description available & (gnl|cdd|84495 : 82.6) no description available & (reliability: 418.0) & (original description: Putative SR34A, Description = Serine/arginine-rich splicing factor SR34A, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1931_26455-45415' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 122.0) no description available & (reliability: 298.0) & (original description: Putative Snrpb2, Description = U2-snRNP-specific b'' protein, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1978_179766-192523' '(at4g36690 : 626.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 440.0) no description available & (reliability: 1252.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold4040_221094-225646' '(at1g23860 : 96.7) Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing.; RS-containing zinc finger protein 21 (RSZP21); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2). & (reliability: 193.4) & (original description: Putative 9G8, Description = Serine/arginine-rich splicing factor 7, PFAM = PF00076;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold4270_139606-152607' '(at4g21660 : 641.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 423.0) no description available & (gnl|cdd|34781 : 245.0) no description available & (reliability: 1282.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold5499_30141-41161' '(at1g17370 : 538.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1076.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold6735_71341-77660' '(at1g03140 : 443.0) splicing factor Prp18 family protein; INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), Splicing factor motif (InterPro:IPR003648), Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54590.1); Has 624 Blast hits to 613 proteins in 206 species: Archae - 0; Bacteria - 5; Metazoa - 235; Fungi - 175; Plants - 58; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38019 : 310.0) no description available & (gnl|cdd|66520 : 214.0) no description available & (reliability: 886.0) & (original description: Putative PRP18, Description = PRP18, PFAM = PF02840;PF08799)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00000071ctg007_24277-29256' '(at5g06160 : 329.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37847 : 217.0) no description available & (gnl|cdd|34787 : 87.5) no description available & (reliability: 658.0) & (original description: Putative ATO, Description = Splicing factor 3A subunit 3, PFAM = PF12108;PF16837)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00003978ctg030_8122-16476' '(at5g38600 : 330.0) Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT1G67210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37884 : 151.0) no description available & (reliability: 660.0) & (original description: Putative At5g38600, Description = Proline-rich spliceosome-associated family protein / zinc knuckle (CCHC-type) family protein, PFAM = PF04046;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00011208ctg001_5460-13457' '(at3g50670 : 253.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 196.0) no description available & (reliability: 506.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF12220;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00012053ctg018_6063-16860' '(at1g60900 : 630.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 437.0) no description available & (reliability: 1260.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00012938ctg003_6748-11477' '(at5g51300 : 675.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 265.0) no description available & (gnl|cdd|29005 : 166.0) no description available & (reliability: 1350.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF00013;PF00076;PF16275)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00021122ctg000_8330-14492' '(at5g64270 : 1957.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35434 : 1699.0) no description available & (gnl|cdd|34780 : 1131.0) no description available & (reliability: 3914.0) & (original description: Putative SF3B1, Description = Splicing factor 3B subunit 1, PFAM = PF08920)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00022423ctg000_35287-45610' '(at3g11960 : 1001.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 450.0) no description available & (reliability: 2002.0) & (original description: Putative Sb02g006020, Description = Putative uncharacterized protein Sb02g006020, PFAM = PF10433)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00022423ctg001_1-5396' '(at3g11960 : 583.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 323.0) no description available & (reliability: 1166.0) & (original description: Putative At3g11960, Description = Cleavage and polyadenylation specificity factor (CPSF) A subunit protein, PFAM = PF03178)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00024628ctg005_8340-10741' '(at4g02400 : 107.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 103.0) no description available & (gnl|cdd|37383 : 87.8) no description available & (reliability: 214.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00028915ctg005_306-5056' '(at3g25440 : 292.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 164.0) no description available & (gnl|cdd|85815 : 88.7) no description available & (reliability: 584.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00032836ctg000_3199-11311' '(at1g02840 : 249.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 199.0) no description available & (gnl|cdd|47687 : 81.0) no description available & (reliability: 498.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00034351ctg004_1-3673' '(at1g55310 : 125.0) Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein.; SC35-like splicing factor 33 (SR33); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1). & (reliability: 250.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00034539ctg000_16601-24794' '(at4g36690 : 632.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 440.0) no description available & (reliability: 1264.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00040867ctg009_10757-20862' '(at1g80070 : 3015.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 2905.0) no description available & (gnl|cdd|34777 : 2338.0) no description available & (reliability: 6030.0) & (original description: Putative Prpf8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF10598;PF10596;PF10597;PF08083;PF08082)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00041481ctg003_1-9799' '(gnl|cdd|37464 : 267.0) no description available & (at1g60200 : 253.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 91.5) no description available & (reliability: 506.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF00076;PF01480)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00043266ctg001_64966-71324' '(at1g03140 : 441.0) splicing factor Prp18 family protein; INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), Splicing factor motif (InterPro:IPR003648), Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54590.1); Has 624 Blast hits to 613 proteins in 206 species: Archae - 0; Bacteria - 5; Metazoa - 235; Fungi - 175; Plants - 58; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38019 : 308.0) no description available & (gnl|cdd|66520 : 214.0) no description available & (reliability: 882.0) & (original description: Putative PRP18, Description = PRP18, PFAM = PF02840;PF08799)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00047179ctg002_2171-6585' '(at3g27550 : 371.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 148.0) no description available & (gnl|cdd|85815 : 91.4) no description available & (reliability: 742.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00048777ctg000_2747-12028' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00050641ctg001_526-6518' '(at2g18510 : 427.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 339.0) no description available & (p28644|roc1_spiol : 97.4) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (gnl|cdd|31068 : 87.8) no description available & (reliability: 854.0) & (original description: Putative SF3B4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00052867ctg001_8525-16643' '(at5g18810 : 131.0) encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.; SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative SCL28, Description = Arginine/serine-rich splicing factor SCL28 transcript III, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00054521ctg005_1-6674' '(at5g52040 : 197.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.3); Has 11943 Blast hits to 9562 proteins in 408 species: Archae - 0; Bacteria - 134; Metazoa - 7691; Fungi - 1361; Plants - 1617; Viruses - 110; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|35329 : 103.0) no description available & (reliability: 394.0) & (original description: Putative RS27, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00056276ctg003_581-5971' '(at5g42820 : 296.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 256.0) no description available & (reliability: 592.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642)' T
'27.1.1' 'RNA.processing.splicing' 'niben044scf00061332ctg000_1-3131' '(at3g19840 : 83.6) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = Transcription elongation regulator 1, PFAM = PF00397)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00087_333933-339275' '(at2g24590 : 140.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00154_531125-541229' '(at1g23860 : 142.0) Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing.; RS-containing zinc finger protein 21 (RSZP21); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2). & (reliability: 284.0) & (original description: Putative RSZP21, Description = Serine/arginine-rich splicing factor RSZ21, PFAM = PF00076;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00180_1173937-1187007' '(at4g21660 : 648.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 432.0) no description available & (gnl|cdd|34781 : 245.0) no description available & (reliability: 1296.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00298_55188-73379' '(at3g14100 : 433.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (gnl|cdd|35370 : 133.0) no description available & (reliability: 846.0) & (original description: Putative ouBP, Description = Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00369_1037798-1148016' '(gnl|cdd|35328 : 221.0) no description available & (at1g02840 : 218.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|47687 : 82.2) no description available & (reliability: 436.0) & (original description: Putative SR30, Description = Arginine/serine-rich splicing factor SR30 transcript VI, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00369_1138432-1147971' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 203.0) no description available & (gnl|cdd|47687 : 83.0) no description available & (reliability: 418.0) & (original description: Putative sfrs1, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00449_85389-92798' '(at3g55200 : 2260.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|37109 : 1594.0) no description available & (gnl|cdd|66828 : 228.0) no description available & (reliability: 4520.0) & (original description: Putative Sf3b3, Description = Splicing factor 3B subunit 3, PFAM = PF03178;PF10433)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00487_142488-147819' '(at3g13570 : 131.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 84.9) no description available & (reliability: 262.0) & (original description: Putative SCL30A, Description = Serine/arginine-rich SC35-like splicing factor SCL30A, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00494_872049-877993' '(at5g37370 : 399.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 302.0) no description available & (gnl|cdd|86306 : 127.0) no description available & (reliability: 798.0) & (original description: Putative ATSRL1, Description = At5g37370, PFAM = PF03371)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00794_133184-140948' '(at5g18810 : 125.0) encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.; SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SR33, Description = Serine/arginine rich splicing factor, putative, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf00949_137153-141469' '(at5g42820 : 283.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 226.0) no description available & (reliability: 566.0) & (original description: Putative u2snRNP, Description = Putative U2 snRNP auxiliary factor, PFAM = PF00642;PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01009_298394-303667' '(at2g37340 : 195.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01107_6734-13129' '(at5g54520 : 452.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G10580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35503 : 320.0) no description available & (gnl|cdd|29257 : 124.0) no description available & (reliability: 904.0) & (original description: Putative pco114009a, Description = Pre-mRNA-splicing factor PRP17, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01109_287792-293572' '(at3g49430 : 262.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 223.0) no description available & (reliability: 524.0) & (original description: Putative srp31, Description = ASF/SF2-like pre-mRNA splicing factor SRP31, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01115_31190-40206' '(at2g47580 : 266.0) encodes spliceosomal protein U1A; spliceosomal protein U1A (U1A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to salt stress, nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleolus, nucleus, U1 snRNP; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1); Has 2473 Blast hits to 2417 proteins in 290 species: Archae - 0; Bacteria - 37; Metazoa - 1259; Fungi - 517; Plants - 407; Viruses - 1; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|39407 : 248.0) no description available & (reliability: 532.0) & (original description: Putative U1A, Description = U1 small nuclear ribonucleoprotein A, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01133_1855729-1861948' '(at3g61860 : 236.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RSP31; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G46610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35329 : 120.0) no description available & (reliability: 472.0) & (original description: Putative RS31, Description = Serine/arginine-rich splicing factor RS31, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01289_585128-600404' '(at5g44200 : 284.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 225.0) no description available & (reliability: 568.0) & (original description: Putative CBP20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01368_75494-86221' '(at4g02400 : 565.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 408.0) no description available & (gnl|cdd|37383 : 193.0) no description available & (reliability: 1130.0) & (original description: Putative At4g02400, Description = U3 ribonucleoprotein family protein, PFAM = PF04615)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01498_180893-233571' '(at5g44200 : 210.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 210.0) no description available & (reliability: 420.0) & (original description: Putative Cbp20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01498_222908-235281' '(at5g44200 : 242.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 213.0) no description available & (reliability: 484.0) & (original description: Putative ncbp2, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01498_222955-235304' '(at5g44200 : 258.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 227.0) no description available & (reliability: 516.0) & (original description: Putative Cbp20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01734_248495-258438' '(at3g25440 : 282.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 158.0) no description available & (gnl|cdd|85815 : 88.7) no description available & (reliability: 564.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01841_159887-164119' '(at3g27550 : 366.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 153.0) no description available & (gnl|cdd|85815 : 92.1) no description available & (reliability: 732.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01918_556295-565278' '(at1g04510 : 691.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 487.0) no description available & (gnl|cdd|29257 : 165.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1382.0) & (original description: Putative PRP19, Description = Pre-mRNA-processing factor 19, PFAM = PF00400;PF00400;PF00400;PF00400;PF08606)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01941_56186-88645' '(at1g60900 : 520.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 358.0) no description available & (reliability: 1040.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01991_30305-47798' '(at5g16180 : 655.0) ortholog of maize chloroplast splicing factor CRS1 (CRS1); FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT3G18390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37201 : 332.0) no description available & (gnl|cdd|85815 : 84.4) no description available & (reliability: 1310.0) & (original description: Putative At5g16180, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985;PF01985;PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 208.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02373_356855-364558' '(at5g64200 : 167.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 80.2) no description available & (reliability: 334.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02373_435812-443554' '(at5g64200 : 163.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 84.4) no description available & (reliability: 326.0) & (original description: Putative sclp, Description = Putative arginine/serine-rich splicing factor, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02381_774008-790565' '(at5g16180 : 647.0) ortholog of maize chloroplast splicing factor CRS1 (CRS1); FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT3G18390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37201 : 338.0) no description available & (gnl|cdd|85815 : 87.1) no description available & (reliability: 1294.0) & (original description: Putative At5g16180, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985;PF01985;PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02426_330018-375439' '(at3g19840 : 573.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 400.0) no description available & (gnl|cdd|34707 : 86.0) no description available & (reliability: 1146.0) & (original description: Putative BnaC05g32820D, Description = BnaC05g32820D protein, PFAM = PF01846;PF01846;PF01846;PF01846;PF01846;PF00397)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02426_366708-370051' '(at3g19840 : 101.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF01846)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02513_267612-275890' '(at5g64200 : 196.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 119.0) no description available & (reliability: 392.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02513_487949-491852' '(at4g13070 : 287.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 317 Blast hits to 276 proteins in 27 species: Archae - 2; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|37201 : 169.0) no description available & (gnl|cdd|85815 : 86.0) no description available & (reliability: 574.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02839_117666-135037' '(at5g06160 : 640.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37847 : 517.0) no description available & (gnl|cdd|34787 : 219.0) no description available & (reliability: 1280.0) & (original description: Putative ATO, Description = Splicing factor SF3a60 homolog, PFAM = PF13297;PF11931;PF12108;PF16837)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf02939_156100-162294' '(at1g04510 : 202.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 181.0) no description available & (reliability: 402.0) & (original description: Putative prp19, Description = Pre-mRNA-processing factor 19, PFAM = PF08606;PF04564)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03066_209637-220199' '(gnl|cdd|37464 : 257.0) no description available & (at1g60200 : 243.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 91.1) no description available & (reliability: 486.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF00076;PF01480)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03250_27816-32732' '(at4g25500 : 224.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 103.0) no description available & (reliability: 448.0) & (original description: Putative RS40, Description = Serine/arginine-rich splicing factor RS40, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03405_263619-273246' '(at1g02840 : 246.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (reliability: 492.0) & (original description: Putative SR34, Description = Serine/arginine-rich-splicing factor SR34, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03693_373170-380780' '(at3g50670 : 254.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 215.0) no description available & (reliability: 508.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03693_692813-701268' '(at4g36690 : 633.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 449.0) no description available & (reliability: 1266.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf03945_84146-87951' '(at4g25500 : 135.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 96.6) no description available & (reliability: 270.0) & (original description: Putative RS27, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04119_146665-165150' '(at1g10320 : 362.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 169.0) no description available & (reliability: 724.0) & (original description: Putative U2AFM, Description = U2AFM, PFAM = PF00642;PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04193_628630-637869' '(at1g65660 : 689.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37771 : 578.0) no description available & (reliability: 1378.0) & (original description: Putative slu7, Description = Pre-mRNA-splicing factor SLU7, PFAM = PF11708)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04240_273173-289213' '(at4g36690 : 619.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 438.0) no description available & (reliability: 1238.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04384_563907-578093' '(at4g21660 : 642.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 417.0) no description available & (gnl|cdd|34781 : 239.0) no description available & (reliability: 1284.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04422_328919-335277' '(at3g13570 : 132.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 81.0) no description available & (reliability: 264.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04749_125722-134029' '(at2g47580 : 252.0) encodes spliceosomal protein U1A; spliceosomal protein U1A (U1A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to salt stress, nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleolus, nucleus, U1 snRNP; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1); Has 2473 Blast hits to 2417 proteins in 290 species: Archae - 0; Bacteria - 37; Metazoa - 1259; Fungi - 517; Plants - 407; Viruses - 1; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|39407 : 248.0) no description available & (reliability: 504.0) & (original description: Putative U1A, Description = U1 small nuclear ribonucleoprotein A, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf04925_617-14294' '(at2g24590 : 122.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05188_9280-14803' '(at3g23325 : 172.0) Splicing factor 3B subunit 5/RDS3 complex subunit 10; CONTAINS InterPro DOMAIN/s: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (InterPro:IPR009846), Splicing factor 3B, subunit 5 (InterPro:IPR017089); BEST Arabidopsis thaliana protein match is: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (TAIR:AT4G14342.1); Has 334 Blast hits to 334 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 97; Plants - 62; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|70645 : 151.0) no description available & (gnl|cdd|38695 : 135.0) no description available & (reliability: 344.0) & (original description: Putative sf3b5, Description = Splicing factor 3B subunit 5, PFAM = PF07189)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05298_434102-446284' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 204.0) no description available & (gnl|cdd|84495 : 83.0) no description available & (reliability: 418.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05306_288341-293600' '(at2g37340 : 200.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05343_68555-74483' '(at3g49430 : 274.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 231.0) no description available & (reliability: 548.0) & (original description: Putative Srsf9, Description = Serine/arginine-rich splicing factor 9, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05610_156748-164516' '(at3g50670 : 283.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 212.0) no description available & (reliability: 566.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05822_661230-675045' '(at2g29210 : 181.0) splicing factor PWI domain-containing protein; INVOLVED IN: RNA splicing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12440.1); Has 159601 Blast hits to 84623 proteins in 2432 species: Archae - 148; Bacteria - 15367; Metazoa - 68765; Fungi - 25678; Plants - 14277; Viruses - 2838; Other Eukaryotes - 32528 (source: NCBI BLink). & (gnl|cdd|79822 : 106.0) no description available & (gnl|cdd|37357 : 96.3) no description available & (reliability: 362.0) & (original description: Putative Srrm1, Description = Serine/arginine repetitive matrix protein 1, PFAM = PF01480)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf05961_221686-226788' '(at3g25440 : 292.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 165.0) no description available & (gnl|cdd|85815 : 90.6) no description available & (reliability: 584.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06207_142275-148503' '(at5g52040 : 215.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.3); Has 11943 Blast hits to 9562 proteins in 408 species: Archae - 0; Bacteria - 134; Metazoa - 7691; Fungi - 1361; Plants - 1617; Viruses - 110; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|35329 : 113.0) no description available & (reliability: 430.0) & (original description: Putative RS40, Description = Serine/arginine-rich splicing factor RS40, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06350_125393-133166' '(at5g42820 : 300.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 255.0) no description available & (reliability: 600.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642;PF00642)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06716_212261-218034' '(at5g64270 : 1954.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35434 : 1699.0) no description available & (gnl|cdd|34780 : 1131.0) no description available & (reliability: 3908.0) & (original description: Putative SF3B1, Description = Splicing factor 3B subunit 1, PFAM = PF08920)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06919_16265-33596' '(at3g25440 : 291.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 166.0) no description available & (gnl|cdd|34727 : 103.0) no description available & (p04352|calm_chlre : 91.7) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 582.0) & (original description: Putative cbp1, Description = Putative CRM domain-containing protein, PFAM = PF13499;PF13499;PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06942_64200-71188' '(at2g30260 : 284.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 259.0) no description available & (reliability: 568.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf06942_65365-69694' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 130.0) no description available & (reliability: 298.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf07227_83409-88465' '(at2g37340 : 184.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf07400_8088-17972' '(at1g10320 : 367.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 166.0) no description available & (reliability: 734.0) & (original description: Putative u2AF, Description = mRNA splicing factor U2 associated factor, PFAM = PF00076;PF00642;PF00642)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf07402_206332-210342' '(at5g37370 : 233.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 191.0) no description available & (gnl|cdd|86306 : 100.0) no description available & (reliability: 466.0) & (original description: Putative Os05g0178900, Description = Os05g0178900 protein, PFAM = PF03371)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf08419_285-33267' '(at1g60900 : 520.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 362.0) no description available & (reliability: 1040.0) & (original description: Putative SPL8, Description = U2 snRNP auxiliary factor, large subunit, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf08531_102570-157230' '(at5g44200 : 135.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 129.0) no description available & (reliability: 270.0) & (original description: Putative cbc2, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf08562_24661-29836' '(at5g42820 : 296.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 252.0) no description available & (reliability: 592.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf08566_482161-491037' '(at5g64200 : 172.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 84.8) no description available & (reliability: 344.0) & (original description: Putative SC35, Description = Serine/arginine-rich splicing factor SC35, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf08653_561048-568491' '(at2g18510 : 416.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 341.0) no description available & (p19682|roc3_nicsy : 94.7) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.8) no description available & (reliability: 832.0) & (original description: Putative sf3b4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf10712_97893-104047' '(at2g37340 : 180.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf11037_1-10420' '(at1g02840 : 223.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 81.8) no description available & (reliability: 446.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf11167_53044-58755' '(at3g49430 : 239.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 215.0) no description available & (reliability: 478.0) & (original description: Putative SR34A, Description = Serine/arginine-rich splicing factor SR34A, PFAM = PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf12383_201798-214425' '(gnl|cdd|37464 : 269.0) no description available & (at1g60200 : 268.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 85.7) no description available & (reliability: 536.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF01480;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf12404_6118-19449' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 170.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf13002_81007-97162' '(at3g11960 : 693.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 326.0) no description available & (reliability: 1386.0) & (original description: Putative Sb02g006020, Description = Putative uncharacterized protein Sb02g006020, PFAM = PF10433;PF03178)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf13676_155-4620' '(at5g51300 : 725.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 273.0) no description available & (gnl|cdd|29005 : 163.0) no description available & (reliability: 1450.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF16275;PF00076;PF00013)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf15657_136600-147075' '(at3g25440 : 271.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 156.0) no description available & (gnl|cdd|85815 : 89.0) no description available & (reliability: 542.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf16498_95900-98268' '(at1g60900 : 181.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 162.0) no description available & (reliability: 362.0) & (original description: Putative BnaCnng28730D, Description = BnaCnng28730D protein, PFAM = PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf16657_111795-121054' '(at1g17370 : 562.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 89.7) no description available & (reliability: 1124.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf18000_52701-59422' '(at1g17370 : 608.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1216.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf19059_1672-8023' '(at4g02400 : 110.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = U3 small nucleolar RNA-associated protein, putative, PFAM = PF04615)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf19059_3453-6385' '(gnl|cdd|68196 : 104.0) no description available & (at4g02400 : 103.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|37383 : 87.8) no description available & (reliability: 206.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf22781_21449-36726' '(at5g38600 : 327.0) Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT1G67210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37884 : 149.0) no description available & (reliability: 654.0) & (original description: Putative At5g38600, Description = Proline-rich spliceosome-associated family protein / zinc knuckle (CCHC-type) family protein, PFAM = PF00098;PF04046)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf24096_133468-136783' '(at5g42820 : 334.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 254.0) no description available & (reliability: 668.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00642;PF00642;PF00076)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf27139_6515-18602' '(at1g04510 : 791.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 591.0) no description available & (gnl|cdd|29257 : 172.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1560.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF08606;PF00400;PF00400;PF00400;PF04564)' T
'27.1.1' 'RNA.processing.splicing' 'niben101scf28259_91325-96055' '(at4g25500 : 195.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 100.0) no description available & (reliability: 390.0) & (original description: Putative RS31, Description = Serine/arginine-rich splicing factor RS31, PFAM = PF00076;PF00076)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold4469_59156-68307' '(at3g06480 : 734.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 425.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00271;PF00397;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold5152_34457-52233' '(at5g47010 : 1913.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1364.0) no description available & (gnl|cdd|31309 : 365.0) no description available & (reliability: 3826.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF13086;PF04851;PF09416;PF13087)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold10326_12457-24988' '(gnl|cdd|36140 : 637.0) no description available & (at1g26370 : 503.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 447.0) no description available & (reliability: 1006.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF04408;PF00271;PF07717)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold11226_26437-35002' '(p46942|db10_nicsy : 1060.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 740.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 546.0) no description available & (gnl|cdd|30859 : 403.0) no description available & (reliability: 1480.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1256.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold24983_25017-28976' '(at2g33730 : 933.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 292.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1866.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold27087_2176-11434' '(at2g42520 : 763.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 603.0) no description available & (gnl|cdd|30859 : 390.0) no description available & (p46942|db10_nicsy : 322.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1526.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold35440_14231-21839' '(at1g24090 : 306.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 554.0) & (original description: Putative At1g24090, Description = RNase H domain-containing protein, PFAM = PF13456)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold38179_12903-18092' '(at5g08020 : 835.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 171.0) no description available & (reliability: 1600.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF16900;PF04057;PF01336;PF08646)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold65967_1-7641' '(at1g63250 : 830.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (gnl|cdd|35563 : 533.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (p46942|db10_nicsy : 154.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1660.0) & (original description: Putative BnaA09g12550D, Description = BnaA09g12550D protein, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold33_1073777-1078632' '(gnl|cdd|36141 : 1188.0) no description available & (at1g32490 : 1107.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|31829 : 661.0) no description available & (reliability: 2214.0) & (original description: Putative prp8, Description = Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, PFAM = PF07717;PF00271;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold380_50563-59630' '(at1g24090 : 292.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 570.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold655_129893-137533' '(p46942|db10_nicsy : 719.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 671.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 546.0) no description available & (gnl|cdd|30859 : 404.0) no description available & (reliability: 1342.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold782_553423-573256' '(at5g47010 : 1688.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1101.0) no description available & (gnl|cdd|87961 : 279.0) no description available & (reliability: 3376.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF13087;PF13087;PF04851;PF09416;PF13086)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold873_243631-256171' '(gnl|cdd|36140 : 656.0) no description available & (at1g26370 : 500.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 463.0) no description available & (reliability: 1000.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF07717;PF04408;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold1900_51930-69377' '(at5g47010 : 1878.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1356.0) no description available & (gnl|cdd|31309 : 361.0) no description available & (reliability: 3756.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF04851;PF13086;PF13087;PF09416)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold1986_282004-295478' '(at3g22330 : 457.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 334.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (q41382|rh7_spiol : 254.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 914.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold2103_337275-347509' '(at1g24090 : 266.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 510.0) & (original description: Putative Sb07g023590, Description = Putative uncharacterized protein Sb07g023590, PFAM = PF13456)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold2319_456901-466143' '(at5g26742 : 884.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 398.0) no description available & (gnl|cdd|30859 : 367.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1768.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF08152;PF00098;PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 546.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold4291_71586-75718' '(at2g33730 : 940.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 724.0) no description available & (gnl|cdd|30859 : 347.0) no description available & (p46942|db10_nicsy : 295.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1880.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold4712_110626-121295' '(at3g01410 : 158.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 108.0) no description available & (reliability: 292.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold7880_42056-55974' '(at5g63630 : 805.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (gnl|cdd|35563 : 585.0) no description available & (gnl|cdd|30859 : 314.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1610.0) & (original description: Putative RH26, Description = DEAD-box ATP-dependent RNA helicase 26, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00010695ctg006_4219-11724' '(at5g62190 : 728.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (q41382|rh7_spiol : 720.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (gnl|cdd|35552 : 395.0) no description available & (gnl|cdd|30859 : 302.0) no description available & (reliability: 1456.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00270;PF00271;PF08152)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00011757ctg022_16303-24843' '(p46942|db10_nicsy : 1052.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 740.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 400.0) no description available & (reliability: 1480.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00015643ctg002_8409-15571' '(p46942|db10_nicsy : 777.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at5g14610 : 705.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 405.0) no description available & (reliability: 1410.0) & (original description: Putative RH46, Description = DEAD-box ATP-dependent RNA helicase 46, PFAM = PF00397;PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00018410ctg005_2805-5834' '(at5g47010 : 84.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative LBA1, Description = Regulator of nonsense transcripts 1-like protein, PFAM = )' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00018439ctg006_3663-10866' '(at3g62310 : 1274.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 1175.0) no description available & (gnl|cdd|31829 : 668.0) no description available & (reliability: 2548.0) & (original description: Putative dhx15, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, PFAM = PF13401;PF07717;PF04408;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00021398ctg011_81-9180' '(at5g26742 : 898.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 397.0) no description available & (gnl|cdd|30859 : 369.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1796.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF00271;PF00270;PF08152;PF00098)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00027428ctg000_2446-6249' '(at2g33730 : 937.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 292.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1874.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00029160ctg000_4958-10430' '(at3g06480 : 647.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 519.0) no description available & (gnl|cdd|30859 : 403.0) no description available & (reliability: 1294.0) & (original description: Putative ddx5, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00138_289079-293693' '(gnl|cdd|36141 : 674.0) no description available & (at1g32490 : 627.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|31829 : 356.0) no description available & (reliability: 1254.0) & (original description: Putative cdc28, Description = Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, PFAM = PF00271;PF07717;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00200_95824-111297' '(at5g13010 : 1622.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36142 : 1295.0) no description available & (gnl|cdd|31829 : 650.0) no description available & (reliability: 3244.0) & (original description: Putative CUV, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7, PFAM = PF00271;PF07717;PF00270;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00218_64384-71005' '(at5g47010 : 169.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 90.1) no description available & (gnl|cdd|87961 : 81.9) no description available & (reliability: 338.0) & (original description: Putative 650, Description = Regulator of nonsense transcripts 1, PFAM = PF09416)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00793_101031-107655' '(at3g62310 : 1298.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 1177.0) no description available & (gnl|cdd|31829 : 668.0) no description available & (reliability: 2596.0) & (original description: Putative dhx15, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, PFAM = PF00271;PF04408;PF07717;PF13401)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 576.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf01740_1812242-1817974' '(at3g58570 : 572.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (gnl|cdd|35556 : 534.0) no description available & (gnl|cdd|30859 : 381.0) no description available & (p46942|db10_nicsy : 316.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1144.0) & (original description: Putative an3, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02033_343568-349805' '(q41382|rh7_spiol : 732.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 727.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (gnl|cdd|35552 : 397.0) no description available & (gnl|cdd|30859 : 296.0) no description available & (reliability: 1454.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00270;PF00271;PF08152)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02072_186765-194520' '(at2g42520 : 749.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 607.0) no description available & (gnl|cdd|30859 : 391.0) no description available & (p46942|db10_nicsy : 319.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1498.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02420_668888-676566' '(at5g62190 : 723.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (q41382|rh7_spiol : 720.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (gnl|cdd|35552 : 396.0) no description available & (gnl|cdd|30859 : 298.0) no description available & (reliability: 1446.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF08152;PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02589_67767-74198' '(at3g06480 : 158.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 82.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 316.0) & (original description: Putative DBP2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02762_275203-287327' '(at5g26742 : 884.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 399.0) no description available & (gnl|cdd|30859 : 367.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1768.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF00270;PF08152;PF00098;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03031_510658-522013' '(at1g05460 : 1055.0) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.; SILENCING DEFECTIVE (SDE3); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: virus induced gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, UvrD/REP type (InterPro:IPR000212); BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219; Bacteria - 2402; Metazoa - 1784; Fungi - 1431; Plants - 666; Viruses - 219; Other Eukaryotes - 2106 (source: NCBI BLink). & (gnl|cdd|37015 : 445.0) no description available & (gnl|cdd|31309 : 191.0) no description available & (reliability: 2110.0) & (original description: Putative SDE3, Description = Probable RNA helicase SDE3, PFAM = PF13086;PF13086;PF13087)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03049_783383-792617' '(at3g06480 : 723.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 543.0) no description available & (gnl|cdd|30859 : 424.0) no description available & (reliability: 1446.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397;PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03052_19884-52340' '(at4g18465 : 1048.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36140 : 851.0) no description available & (gnl|cdd|31829 : 590.0) no description available & (reliability: 2096.0) & (original description: Putative dhx8, Description = Putative ATP-dependent RNA helicase DHX35, PFAM = PF00271;PF04408;PF07717)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03436_20348-44280' '(at1g63250 : 840.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (gnl|cdd|35563 : 539.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p41380|if4a3_nicpl : 157.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1680.0) & (original description: Putative Os06g0526600, Description = DEAD-box ATP-dependent RNA helicase 31, PFAM = PF00270;PF00271;PF03080)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03703_329972-337794' '(at3g22330 : 605.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 420.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (q41382|rh7_spiol : 317.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1210.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03952_114459-130073' '(at5g63630 : 806.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (gnl|cdd|35563 : 588.0) no description available & (gnl|cdd|30859 : 315.0) no description available & (p46942|db10_nicsy : 172.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1612.0) & (original description: Putative RH26, Description = DEAD-box ATP-dependent RNA helicase 26, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04403_33373-46726' '(at1g26370 : 956.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|36140 : 825.0) no description available & (gnl|cdd|31829 : 615.0) no description available & (reliability: 1912.0) & (original description: Putative RID1, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10, PFAM = PF07717;PF04408;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04403_33382-47713' '(gnl|cdd|36142 : 565.0) no description available & (at1g26370 : 504.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 440.0) no description available & (reliability: 1008.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF00271;PF07717;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04410_946884-1029148' '(at5g61140 : 3322.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (gnl|cdd|36170 : 1379.0) no description available & (gnl|cdd|31397 : 538.0) no description available & (reliability: 6644.0) & (original description: Putative BRR2C, Description = DExH-box ATP-dependent RNA helicase DExH14, PFAM = PF00271;PF00271;PF00270;PF00270;PF02889;PF02889)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04410_1008095-1011357' '(at5g61140 : 291.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (gnl|cdd|47902 : 156.0) no description available & (reliability: 582.0) & (original description: Putative ascc3, Description = Activating signal cointegrator 1 complex subunit 3, PFAM = PF02889)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04506_225885-240538' '(at1g27900 : 1031.0) RNA helicase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 10760 Blast hits to 9882 proteins in 1732 species: Archae - 26; Bacteria - 3503; Metazoa - 2392; Fungi - 1270; Plants - 841; Viruses - 1056; Other Eukaryotes - 1672 (source: NCBI BLink). & (gnl|cdd|36140 : 749.0) no description available & (gnl|cdd|31829 : 583.0) no description available & (reliability: 2062.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF07717;PF00271;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04633_6476-15287' '(p46942|db10_nicsy : 1094.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 744.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 543.0) no description available & (gnl|cdd|30859 : 402.0) no description available & (reliability: 1488.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05056_56263-59915' '(at1g12770 : 649.0) Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (gnl|cdd|35548 : 286.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p46942|db10_nicsy : 147.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1298.0) & (original description: Putative RH47, Description = DEAD-box ATP-dependent RNA helicase 47, mitochondrial, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05447_188097-211203' '(at2g42520 : 778.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 593.0) no description available & (gnl|cdd|30859 : 394.0) no description available & (p46942|db10_nicsy : 316.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1556.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05523_129901-136800' '(p46942|db10_nicsy : 368.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 312.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 247.0) no description available & (gnl|cdd|30859 : 173.0) no description available & (reliability: 624.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05711_72775-79746' '(at2g42520 : 768.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 591.0) no description available & (gnl|cdd|30859 : 395.0) no description available & (p46942|db10_nicsy : 317.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1536.0) & (original description: Putative PL10B, Description = DEAD-box ATP-dependent RNA helicase 52B, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06008_1-4775' '(at5g08020 : 847.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 172.0) no description available & (reliability: 1608.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF04057;PF16900;PF08646;PF01336)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06190_198485-202767' '(at5g51280 : 990.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (gnl|cdd|35562 : 942.0) no description available & (gnl|cdd|30859 : 346.0) no description available & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1980.0) & (original description: Putative RH35, Description = DEAD-box ATP-dependent RNA helicase 35, PFAM = PF00098;PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06412_536377-541856' '(at3g62310 : 898.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 814.0) no description available & (gnl|cdd|31829 : 591.0) no description available & (reliability: 1796.0) & (original description: Putative PRP43, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43, PFAM = PF13401;PF00271;PF04408)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06442_49733-57319' '(p46942|db10_nicsy : 452.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at5g14610 : 449.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (gnl|cdd|35552 : 412.0) no description available & (gnl|cdd|30859 : 296.0) no description available & (reliability: 898.0) & (original description: Putative DBP2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397;PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06884_9417-15923' '(q41382|rh7_spiol : 717.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 714.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (gnl|cdd|35552 : 394.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (reliability: 1428.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00271;PF00270;PF08152)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07253_1-2885' '(at2g33730 : 947.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 352.0) no description available & (p46942|db10_nicsy : 295.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1894.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07833_71432-80829' '(at3g22330 : 566.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 422.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (q41382|rh7_spiol : 306.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1132.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07833_72066-114704' '(at3g22330 : 469.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 345.0) no description available & (gnl|cdd|30859 : 302.0) no description available & (q41382|rh7_spiol : 257.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 938.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf08679_361516-371378' '(at2g42520 : 773.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 604.0) no description available & (gnl|cdd|30859 : 387.0) no description available & (p46942|db10_nicsy : 323.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1546.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1264.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf09284_190948-210674' '(at5g47010 : 1942.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1363.0) no description available & (gnl|cdd|31309 : 359.0) no description available & (reliability: 3884.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF04851;PF09416;PF13087;PF13086)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf10336_356621-365688' '(at1g24090 : 300.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 115.0) no description available & (reliability: 550.0) & (original description: Putative rnhA, Description = RNase H domain-containing protein, PFAM = PF13456)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf11806_42157-79839' '(at1g32490 : 1480.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|36141 : 1326.0) no description available & (gnl|cdd|31829 : 679.0) no description available & (reliability: 2960.0) & (original description: Putative ESP3, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, PFAM = PF04408;PF07717;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf12372_99803-105228' '(at1g20920 : 1058.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (gnl|cdd|35555 : 867.0) no description available & (gnl|cdd|30859 : 337.0) no description available & (p46942|db10_nicsy : 310.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2116.0) & (original description: Putative prp5, Description = Putative ATP-dependent RNA helicase DDX46, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf13411_434133-441934' '(at3g22330 : 605.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 427.0) no description available & (gnl|cdd|30859 : 379.0) no description available & (q41382|rh7_spiol : 317.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1210.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf15419_157029-164865' '(at1g55150 : 734.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 593.0) no description available & (p46942|db10_nicsy : 433.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00270;PF00271)' T
'27.1.2' 'RNA.processing.RNA helicase' 'niben101scf33352_12075-38896' '(at1g55150 : 763.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 597.0) no description available & (p46942|db10_nicsy : 439.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1526.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00271;PF00270)' T
'27.1.3' 'RNA.processing.3' end processing' '' ''
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.3scaffold25254_6042-15212' '(at4g32850 : 793.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 660.0) no description available & (gnl|cdd|80088 : 545.0) no description available & (reliability: 1586.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF01909;PF04926;PF04928)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.5scaffold773_584267-594005' '(at2g25850 : 852.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 2 (PAPS2); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.9). & (gnl|cdd|37456 : 712.0) no description available & (gnl|cdd|80088 : 565.0) no description available & (reliability: 1704.0) & (original description: Putative PAPS2, Description = Nuclear poly(A) polymerase 2, PFAM = PF01909;PF04928;PF04926)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.5scaffold1254_170833-185641' '(at4g32850 : 805.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 671.0) no description available & (gnl|cdd|80088 : 548.0) no description available & (reliability: 1610.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF04928;PF01909;PF04926;PF04926)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00000087ctg004_5045-10494' '(at3g06560 : 537.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 432.0) no description available & (gnl|cdd|80088 : 348.0) no description available & (reliability: 1074.0) & (original description: Putative PAPS3, Description = Nuclear poly(A) polymerase 3, PFAM = PF04928;PF01909)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00002688ctg014_1869-6154' '(at4g32850 : 682.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 568.0) no description available & (gnl|cdd|80088 : 441.0) no description available & (reliability: 1364.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF04928;PF04926)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00041648ctg002_1-2936' '(at4g32850 : 136.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 127.0) no description available & (gnl|cdd|80088 : 120.0) no description available & (reliability: 272.0) & (original description: Putative nPAP, Description = Poly(A) polymerase, PFAM = PF04928)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf00745_171923-188864' '(at4g32850 : 862.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 723.0) no description available & (gnl|cdd|80088 : 569.0) no description available & (reliability: 1724.0) & (original description: Putative PAPS2, Description = Nuclear poly(A) polymerase 2, PFAM = PF04928;PF01909;PF04926;PF04926)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf01022_50180-58253' '(at3g06560 : 561.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 460.0) no description available & (gnl|cdd|80088 : 379.0) no description available & (reliability: 1122.0) & (original description: Putative PAPS3, Description = Nuclear poly(A) polymerase 3, PFAM = PF04928)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf01539_340810-348750' '(at4g32850 : 813.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 691.0) no description available & (gnl|cdd|80088 : 555.0) no description available & (reliability: 1626.0) & (original description: Putative nPAP, Description = Poly(A) polymerase, PFAM = PF04928;PF04926;PF01909)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf02111_1838410-1845412' '(at3g06560 : 531.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 406.0) no description available & (gnl|cdd|80088 : 321.0) no description available & (reliability: 1062.0) & (original description: Putative PAPS3, Description = Nucleotidyltransferase, class I, C-terminal-like protein, PFAM = PF04928;PF04928)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf02217_497925-507095' '(at4g32850 : 856.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 713.0) no description available & (gnl|cdd|80088 : 566.0) no description available & (reliability: 1712.0) & (original description: Putative PAP, Description = Poly(A) polymerase, PFAM = PF04928;PF04926;PF01909)' T
'27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf04024_24758-35332' '(at1g17980 : 780.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 1 (PAPS1); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: poly(A) polymerase 2 (TAIR:AT2G25850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37456 : 697.0) no description available & (gnl|cdd|80088 : 579.0) no description available & (reliability: 1560.0) & (original description: Putative PAPOLG, Description = Poly(A) polymerase gamma, PFAM = PF04928;PF04926;PF01909)' T
'27.1.3.2' 'RNA.processing.3' end processing.CPSF160' 'niben101scf00485_55914-106381' '(at5g51660 : 2045.0) cleavage and polyadenylation specificity factor 160 (CPSF160); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 1568 Blast hits to 1022 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 654; Fungi - 429; Plants - 267; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (q7xwp1|cpsf1_orysa : 1862.0) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|37107 : 1219.0) no description available & (gnl|cdd|34762 : 180.0) no description available & (reliability: 4090.0) & (original description: Putative CPSF160, Description = Cleavage and polyadenylation specificity factor subunit 1, PFAM = PF10433;PF03178)' T
'27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben044scf00018207ctg000_1-17830' '(at5g23880 : 1170.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 1081.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|36350 : 800.0) no description available & (gnl|cdd|31429 : 201.0) no description available & (reliability: 2340.0) & (original description: Putative CPSF100, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF07521;PF16661;PF10996;PF13299)' T
'27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben101scf00595_562084-565980' '(at5g23880 : 228.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36350 : 181.0) no description available & (q652p4|cpsf2_orysa : 140.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative cpsf2, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF16661;PF16661)' T
'27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben101scf12718_128786-159364' '(at5g23880 : 1162.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 1078.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|36350 : 787.0) no description available & (gnl|cdd|31429 : 194.0) no description available & (reliability: 2324.0) & (original description: Putative CPSF100, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF16661;PF07521;PF10996;PF13299)' T
'27.1.3.4' 'RNA.processing.3' end processing.CPSF73a' 'niben101scf08334_13263-25674' '(at1g61010 : 1183.0) cleavage and polyadenylation specificity factor 73-I (CPSF73-I); CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term (InterPro:IPR021718); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36352 : 888.0) no description available & (gnl|cdd|31429 : 373.0) no description available & (q652p4|cpsf2_orysa : 130.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 2366.0) & (original description: Putative ysh1, Description = Endoribonuclease YSH1, PFAM = PF00753;PF11718;PF07521;PF10996)' T
'27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'nbv0.3scaffold54658_1-13557' '(at2g01730 : 574.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 547.0) no description available & (gnl|cdd|31429 : 227.0) no description available & (q652p4|cpsf2_orysa : 100.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1148.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF00753)' T
'27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf04568_233383-250349' '(at2g01730 : 577.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 481.0) no description available & (gnl|cdd|31429 : 204.0) no description available & (q652p4|cpsf2_orysa : 80.1) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1154.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521)' T
'27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf08368_156952-194886' '(at2g01730 : 832.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 757.0) no description available & (gnl|cdd|31429 : 320.0) no description available & (q652p4|cpsf2_orysa : 125.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1664.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521;PF13639;PF16661)' T
'27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf08368_157252-182994' '(at2g01730 : 733.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 632.0) no description available & (gnl|cdd|31429 : 274.0) no description available & (q652p4|cpsf2_orysa : 120.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1466.0) & (original description: Putative cpsf3l, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521;PF16661)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.3scaffold20992_20267-32663' '(at1g30460 : 530.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 292.0) no description available & (gnl|cdd|67749 : 113.0) no description available & (reliability: 1060.0) & (original description: Putative Os06g0677700, Description = Zinc finger CCCH domain-containing protein 45, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.3scaffold24383_12386-27032' '(at1g30460 : 541.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 308.0) no description available & (gnl|cdd|67749 : 116.0) no description available & (reliability: 1082.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.5scaffold1071_408700-425486' '(at1g30460 : 510.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 314.0) no description available & (gnl|cdd|67749 : 118.0) no description available & (reliability: 1020.0) & (original description: Putative OXT6, Description = Putative ATP-dependent RNA helicase YTHDC2, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben044scf00002997ctg026_666-8914' '(at1g30460 : 331.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 234.0) no description available & (reliability: 662.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben044scf00024560ctg024_6098-8650' '(at1g30460 : 132.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 124.0) no description available & (reliability: 264.0) & (original description: Putative OXT6, Description = Cleavage and polyadenylation specificity factor CPSF30, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben101scf01281_695170-720102' '(at1g30460 : 493.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 293.0) no description available & (gnl|cdd|67749 : 99.6) no description available & (reliability: 986.0) & (original description: Putative Os06g0677700, Description = Zinc finger CCCH domain-containing protein 45, PFAM = PF04146)' T
'27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben101scf01395_423826-440378' '(at1g30460 : 508.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 292.0) no description available & (gnl|cdd|67749 : 115.0) no description available & (reliability: 1016.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T
'27.1.3.7' 'RNA.processing.3' end processing.Fip1' 'niben101scf08006_115852-127865' '(at5g58040 : 80.1) Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.; homolog of yeast FIP1 [V] (FIP1[V]); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854); BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = , PFAM = PF05182)' T
'27.1.3.7' 'RNA.processing.3' end processing.Fip1' 'niben101scf11874_154415-170194' '(at5g58040 : 220.0) Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.; homolog of yeast FIP1 [V] (FIP1[V]); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854); BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36267 : 97.9) no description available & (gnl|cdd|68743 : 87.3) no description available & (reliability: 440.0) & (original description: Putative FIPS5, Description = AtFIP1(V), PFAM = PF05182)' T
'27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'nbv0.3scaffold23481_2900-30306' '(at1g17760 : 886.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 415.0) no description available & (gnl|cdd|34710 : 280.0) no description available & (reliability: 1772.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843)' T
'27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben044scf00000739ctg000_1-20874' '(at1g17760 : 523.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 246.0) no description available & (gnl|cdd|34710 : 179.0) no description available & (reliability: 1046.0) & (original description: Putative RNA14, Description = Cleavage stimulation factor subunit 3, PFAM = PF13428)' T
'27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben101scf00321_52660-72509' '(at1g17760 : 945.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 428.0) no description available & (gnl|cdd|34710 : 282.0) no description available & (reliability: 1890.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843;PF13428)' T
'27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben101scf06213_47790-75377' '(at1g17760 : 892.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 414.0) no description available & (gnl|cdd|69373 : 278.0) no description available & (reliability: 1784.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843)' T
'27.1.3.9' 'RNA.processing.3' end processing.CstF64' 'niben044scf00017115ctg001_7613-16201' '(at1g71800 : 262.0) RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; cleavage stimulating factor 64 (CSTF64); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.3); Has 21430 Blast hits to 18533 proteins in 865 species: Archae - 10; Bacteria - 1688; Metazoa - 9678; Fungi - 3064; Plants - 4656; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|35331 : 106.0) no description available & (gnl|cdd|84495 : 94.1) no description available & (reliability: 524.0) & (original description: Putative CSTF64, Description = Cleavage stimulating factor 64, PFAM = PF00076;PF14327;PF14304)' T
'27.1.3.9' 'RNA.processing.3' end processing.CstF64' 'niben101scf03445_276087-284584' '(at1g71800 : 265.0) RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; cleavage stimulating factor 64 (CSTF64); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.3); Has 21430 Blast hits to 18533 proteins in 865 species: Archae - 10; Bacteria - 1688; Metazoa - 9678; Fungi - 3064; Plants - 4656; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|35331 : 110.0) no description available & (gnl|cdd|84495 : 94.1) no description available & (reliability: 530.0) & (original description: Putative CSTF64, Description = Cleavage stimulating factor 64, PFAM = PF14327;PF00076;PF14304)' T
'27.1.3.10' 'RNA.processing.3' end processing.CstF50' 'niben101scf00337_672835-683279' '(at5g60940 : 625.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35859 : 503.0) no description available & (gnl|cdd|29257 : 157.0) no description available & (reliability: 1250.0) & (original description: Putative CSTF1, Description = Cleavage stimulation factor subunit 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'nbv0.5scaffold578_534430-560019' '(at5g13480 : 652.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 532.0) no description available & (gnl|cdd|29257 : 234.0) no description available & (p93107|pf20_chlre : 90.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1304.0) & (original description: Putative FY, Description = Flowering time control protein FY, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'niben044scf00004544ctg004_1-8588' '(at5g13480 : 182.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 121.0) no description available & (reliability: 364.0) & (original description: Putative wdr33, Description = Pre-mRNA 3' end processing protein WDR33, PFAM = )' T
'27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'niben101scf02944_485-24291' '(at5g13480 : 686.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 536.0) no description available & (gnl|cdd|29257 : 232.0) no description available & (p93107|pf20_chlre : 90.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1372.0) & (original description: Putative FY, Description = Flowering time control protein FY, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.1.3.12' 'RNA.processing.3' end processing.CFIm68/59' '' ''
'27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'nbv0.5scaffold3528_237136-242434' '(at4g29820 : 287.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 256.0) no description available & (reliability: 574.0) & (original description: Putative CFIS1, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 1, PFAM = PF13869)' T
'27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf00611_746028-751357' '(at4g29820 : 284.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 254.0) no description available & (reliability: 568.0) & (original description: Putative CFIS1, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 1, PFAM = PF13869)' T
'27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf02266_185771-193606' '(at4g25550 : 365.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36902 : 313.0) no description available & (reliability: 730.0) & (original description: Putative CFIS2, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 2, PFAM = PF13869)' T
'27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf04406_287748-294148' '(at4g25550 : 283.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36902 : 242.0) no description available & (reliability: 566.0) & (original description: Putative cpsf5, Description = Cleavage and polyadenylation specificity factor subunit 5, PFAM = PF13869)' T
'27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf10103_284404-289702' '(at4g29820 : 210.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 183.0) no description available & (reliability: 420.0) & (original description: Putative BnaA01g07160D, Description = BnaA01g07160D protein, PFAM = PF13869)' T
'27.1.3.14' 'RNA.processing.3' end processing.Clp1' 'niben101scf00851_271688-285327' '(at3g04680 : 637.0) Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.; CLP-similar protein 3 (CLPS3); CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP1-similar protein 5 (TAIR:AT5G39930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37960 : 537.0) no description available & (gnl|cdd|87158 : 367.0) no description available & (reliability: 1274.0) & (original description: Putative CLPS3, Description = Protein CLP1 homolog, PFAM = PF06807;PF16573;PF16575)' T
'27.1.3.15' 'RNA.processing.3' end processing.Pcf11p' 'niben101scf05463_245201-257626' '(at4g04885 : 305.0) Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.; PCF11P-similar protein 4 (PCFS4); FUNCTIONS IN: zinc ion binding; INVOLVED IN: positive regulation of flower development, mRNA polyadenylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: shoot apical meristem, sepal, gynoecium, stamen, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT1G66500.1); Has 656 Blast hits to 406 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 279; Plants - 120; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|48659 : 127.0) no description available & (gnl|cdd|37282 : 126.0) no description available & (reliability: 610.0) & (original description: Putative PCFS4, Description = Polyadenylation and cleavage factor homolog 4, PFAM = PF04818)' T
'27.1.3.15' 'RNA.processing.3' end processing.Pcf11p' 'niben101scf06769_105835-114823' '(at2g36480 : 240.0) ENTH/VHS family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: PCF11P-similar protein 4 (TAIR:AT4G04885.1); Has 1695 Blast hits to 821 proteins in 229 species: Archae - 0; Bacteria - 223; Metazoa - 395; Fungi - 309; Plants - 134; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|48659 : 123.0) no description available & (gnl|cdd|37282 : 115.0) no description available & (reliability: 480.0) & (original description: Putative DML1, Description = ARAD1A12518p, PFAM = PF04818)' T
'27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben044scf00016342ctg016_18171-25474' '(at5g01400 : 300.0) Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.; ENHANCED SILENCING PHENOTYPE 4 (ESP4); FUNCTIONS IN: binding; INVOLVED IN: posttranscriptional gene silencing by RNA, RNA processing; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27595.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37106 : 139.0) no description available & (reliability: 600.0) & (original description: Putative ESP4, Description = HEAT repeat-containing protein isoform 1, PFAM = PF11935)' T
'27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben101scf03338_151801-195865' '(at1g27595 : 708.0) CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|37106 : 466.0) no description available & (reliability: 1416.0) & (original description: Putative At1g27595, Description = Putative uncharacterized protein At1g27595, PFAM = PF11935;PF12295)' T
'27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben101scf04722_307967-333672' '(at5g01400 : 1080.0) Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.; ENHANCED SILENCING PHENOTYPE 4 (ESP4); FUNCTIONS IN: binding; INVOLVED IN: posttranscriptional gene silencing by RNA, RNA processing; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27595.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37106 : 403.0) no description available & (reliability: 2160.0) & (original description: Putative ESP4, Description = Symplekin, PFAM = PF12295;PF11935)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.3scaffold4939_47226-64561' '(at5g65260 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 150.0) no description available & (reliability: 448.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.3scaffold16710_29519-37628' '(at5g10350 : 284.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (gnl|cdd|39410 : 158.0) no description available & (reliability: 568.0) & (original description: Putative PABN2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.5scaffold7150_8734-15470' '(at5g65260 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 109.0) no description available & (reliability: 304.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf00783_257048-266258' '(at5g65260 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 159.0) no description available & (reliability: 540.0) & (original description: Putative PABN2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf03496_175143-180911' '(at5g10350 : 232.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (gnl|cdd|39410 : 142.0) no description available & (reliability: 464.0) & (original description: Putative PABN3, Description = Polyadenylate-binding protein 3, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf04761_36434-39021' '(at5g65260 : 158.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 106.0) no description available & (reliability: 316.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T
'27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf04926_83526-110129' '(at5g65260 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 152.0) no description available & (reliability: 450.0) & (original description: Putative pab2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T
'27.1.4' 'RNA.processing.5' end processing' '' ''
'27.1.5' 'RNA.processing.base modifications' 'nbv0.3scaffold39561_10941-19228' '(q6eu10|mta70_orysa : 647.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 635.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37309 : 602.0) no description available & (gnl|cdd|68631 : 215.0) no description available & (reliability: 1270.0) & (original description: Putative MTA, Description = N6-adenosine-methyltransferase MT-A70-like, PFAM = PF05063)' T
'27.1.5' 'RNA.processing.base modifications' 'niben101scf01706_60016-68382' '(q6eu10|mta70_orysa : 647.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 635.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37309 : 602.0) no description available & (gnl|cdd|68631 : 215.0) no description available & (reliability: 1270.0) & (original description: Putative MTA, Description = N6-adenosine-methyltransferase MT-A70-like, PFAM = PF05063)' T
'27.1.10' 'RNA.processing.plastidial RNA' '' ''
'27.1.10.1' 'RNA.processing.plastidial RNA.RNE Complex' '' ''
'27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben044scf00044848ctg001_1431-8533' '(at2g04270 : 538.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 211.0) no description available & (reliability: 1076.0) & (original description: Putative cafA, Description = Ribonuclease G, PFAM = PF10150)' T
'27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf01497_400921-417853' '(at2g04270 : 767.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 273.0) no description available & (reliability: 1534.0) & (original description: Putative RNE, Description = Ribonuclease E/G-like protein, chloroplastic, PFAM = PF10150)' T
'27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf01497_414734-417495' '(at2g04270 : 249.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (reliability: 498.0) & (original description: Putative RNE, Description = Ribonuclease E/G-like protein, chloroplastic, PFAM = PF10150)' T
'27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf06975_42864-51797' '(at2g04270 : 776.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 272.0) no description available & (reliability: 1552.0) & (original description: Putative rne, Description = Ribonuclease, Rne/Rng family, PFAM = PF10150)' T
'27.1.10.1.2' 'RNA.processing.plastidial RNA.RNE Complex.RHON1' 'niben101scf01090_662787-666475' '(at1g06190 : 160.0) Rho termination factor; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 41; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink). & (q8l4e7|bp73_orysa : 145.0) SAP-like protein BP-73 (OsBP-73) (Riaa1) - Oryza sativa (Rice) & (reliability: 320.0) & (original description: Putative RHON1, Description = Rho termination factor, putative, PFAM = PF07498)' T
'27.1.10.1.2' 'RNA.processing.plastidial RNA.RNE Complex.RHON1' 'niben101scf02243_602197-606950' '(at1g06190 : 168.0) Rho termination factor; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 41; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink). & (q8l4e7|bp73_orysa : 144.0) SAP-like protein BP-73 (OsBP-73) (Riaa1) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative RHON1, Description = Rho-N domain-containing protein 1, chloroplastic, PFAM = PF07498)' T
'27.1.10.2' 'RNA.processing.plastidial RNA.splicing' '' ''
'27.1.10.2.1' 'RNA.processing.plastidial RNA.splicing.CAF1' '' ''
'27.1.10.2.2' 'RNA.processing.plastidial RNA.splicing.CAF2' 'niben044scf00033197ctg014_6683-13447' '(at1g23400 : 536.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85815 : 84.0) no description available & (reliability: 1072.0) & (original description: Putative At1g23400, Description = CRS2-associated factor 2, chloroplastic, PFAM = PF01985;PF01985)' T
'27.1.10.2.2' 'RNA.processing.plastidial RNA.splicing.CAF2' 'niben101scf01693_79867-86740' '(at1g23400 : 546.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85815 : 83.7) no description available & (reliability: 1092.0) & (original description: Putative At1g23400, Description = CRS2-associated factor 2, chloroplastic, PFAM = PF01985;PF01985)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold2265_24503-27543' '(at1g75660 : 132.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (p23252|cr2_horvu : 94.7) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 264.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold15073_15387-31918' '(at5g25800 : 702.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37459 : 255.0) no description available & (gnl|cdd|47785 : 110.0) no description available & (reliability: 1404.0) & (original description: Putative SDN5, Description = Small RNA degrading nuclease 5, PFAM = PF00929)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold15124_34359-39360' '(at3g46210 : 206.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 143.0) no description available & (reliability: 412.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold21458_21032-28794' '(at3g01410 : 263.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 526.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold35440_14231-21839' '(at1g24090 : 306.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 612.0) & (original description: Putative At1g24090, Description = RNase H domain-containing protein, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold36373_1536-6116' '(at3g46210 : 186.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 110.0) no description available & (reliability: 372.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold44203_1-4548' '(at2g39780 : 169.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 100.0) no description available & (gnl|cdd|84778 : 81.1) no description available & (reliability: 338.0) & (original description: Putative ngr2, Description = Ribonuclease 2, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold46444_7360-19750' '(at3g60500 : 413.0) Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.; ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3). & (gnl|cdd|36827 : 334.0) no description available & (gnl|cdd|32306 : 234.0) no description available & (reliability: 826.0) & (original description: Putative RRP45B, Description = Exosome complex component RRP45B, PFAM = PF03725;PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold55078_3427-11396' '(at2g25100 : 422.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|37510 : 345.0) no description available & (gnl|cdd|85400 : 163.0) no description available & (reliability: 844.0) & (original description: Putative rnh2, Description = Ribonuclease, PFAM = PF01351)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold58196_1-12172' '(at1g55140 : 229.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.2) no description available & (reliability: 458.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold63263_2604-5473' '(at3g44260 : 365.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 327.0) no description available & (gnl|cdd|86737 : 253.0) no description available & (reliability: 730.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold380_50563-59630' '(at1g24090 : 292.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 584.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold877_539847-542872' '(at3g44260 : 352.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 312.0) no description available & (gnl|cdd|86737 : 238.0) no description available & (reliability: 704.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold1699_277110-284042' '(at2g43190 : 230.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 89.3) no description available & (reliability: 460.0) & (original description: Putative IDP843, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold2103_337275-347509' '(at1g24090 : 266.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 532.0) & (original description: Putative Sb07g023590, Description = Putative uncharacterized protein Sb07g023590, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold2184_66099-77725' '(at2g43190 : 224.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 88.2) no description available & (reliability: 448.0) & (original description: Putative Sb09g023150, Description = Putative uncharacterized protein Sb09g023150, PFAM = PF01868)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4182_170248-201823' '(at1g16800 : 657.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 9771 Blast hits to 8579 proteins in 1344 species: Archae - 197; Bacteria - 2032; Metazoa - 2727; Fungi - 1277; Plants - 815; Viruses - 364; Other Eukaryotes - 2359 (source: NCBI BLink). & (gnl|cdd|37012 : 248.0) no description available & (gnl|cdd|31309 : 205.0) no description available & (reliability: 1314.0) & (original description: Putative F383_11301, Description = Putative helicase senataxin, PFAM = PF13086;PF13087;PF12726)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4267_340564-350499' '(at4g15417 : 94.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative RTL1, Description = Ribonuclease III domain-containing protein, PFAM = PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4591_34577-46416' '(at3g46210 : 372.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 233.0) no description available & (gnl|cdd|31033 : 108.0) no description available & (reliability: 744.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4712_110626-121295' '(at3g01410 : 158.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 108.0) no description available & (reliability: 316.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00000117ctg010_8289-10603' '(at4g37510 : 193.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative CYC1, Description = Chloroplast ribonuclease III domain protein, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00000117ctg013_546-6465' '(at4g37510 : 617.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29697 : 93.4) no description available & (reliability: 1234.0) & (original description: Putative CYC1, Description = Chloroplast ribonuclease III domain protein, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00007030ctg016_666-7808' '(at1g55870 : 705.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 198.0) no description available & (gnl|cdd|86737 : 103.0) no description available & (reliability: 1410.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00008124ctg001_22169-25866' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 247.0) no description available & (p83618|rn28_pangi : 111.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00010077ctg000_12730-24314' '(at5g02250 : 556.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 260.0) no description available & (gnl|cdd|85019 : 252.0) no description available & (reliability: 1112.0) & (original description: Putative rnb, Description = Exoribonuclease II, PFAM = PF00773)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00010357ctg005_1-3136' '(at3g20420 : 166.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|29697 : 121.0) no description available & (gnl|cdd|35920 : 92.0) no description available & (reliability: 332.0) & (original description: Putative ASU1, Description = Ribonuclease 3-like protein 2, PFAM = PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012369ctg011_2713-8620' '(gnl|cdd|37255 : 477.0) no description available & (gnl|cdd|66810 : 388.0) no description available & (at1g75660 : 378.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = PF03159)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012369ctg013_886-9138' '(at1g75660 : 411.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 299.0) no description available & (gnl|cdd|34654 : 171.0) no description available & (reliability: 822.0) & (original description: Putative rat1, Description = 5'-3' exoribonuclease 2, PFAM = PF00098)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012621ctg013_20196-30694' '(at1g24090 : 271.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 542.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00020203ctg002_9458-11179' '(at4g15417 : 105.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|30916 : 94.9) no description available & (reliability: 210.0) & (original description: Putative DCL3, Description = Ribonuclease III domain protein, PFAM = PF14622)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00020710ctg004_14475-17699' '(at3g44260 : 401.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 341.0) no description available & (gnl|cdd|86737 : 271.0) no description available & (reliability: 802.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00026063ctg002_3859-15257' '(at2g43190 : 119.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (reliability: 238.0) & (original description: Putative At2g43190, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00034361ctg000_10223-14384' '(at3g07750 : 397.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|36825 : 279.0) no description available & (gnl|cdd|32306 : 194.0) no description available & (reliability: 794.0) & (original description: Putative EXOSC7, Description = Exosome complex component RRP42, PFAM = PF01138;PF03725)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00052242ctg000_1447-11133' '(at1g31500 : 459.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31530.1); Has 1261 Blast hits to 1240 proteins in 208 species: Archae - 0; Bacteria - 12; Metazoa - 523; Fungi - 244; Plants - 247; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|35839 : 214.0) no description available & (gnl|cdd|34836 : 162.0) no description available & (reliability: 918.0) & (original description: Putative CCR4-4, Description = Carbon catabolite repressor protein 4 homolog 4, PFAM = PF03372)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf00229_541345-557961' '(at5g02250 : 560.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 253.0) no description available & (gnl|cdd|85019 : 249.0) no description available & (reliability: 1120.0) & (original description: Putative RNR1, Description = Ribonuclease II, chloroplastic/mitochondrial, PFAM = PF00773)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf00661_118233-135861' '(at1g24090 : 308.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 616.0) & (original description: Putative Sb09g000480, Description = Putative uncharacterized protein Sb09g000480, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01037_465270-474796' '(at4g15417 : 211.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|80512 : 137.0) no description available & (gnl|cdd|35920 : 92.8) no description available & (reliability: 422.0) & (original description: Putative RTL1, Description = Ribonuclease 3-like protein 3, PFAM = PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01037_544646-551560' '(at4g15417 : 210.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|30916 : 162.0) no description available & (gnl|cdd|35920 : 91.2) no description available & (reliability: 420.0) & (original description: Putative Os06g0358800, Description = Ribonuclease 3-like protein 3, PFAM = PF00035;PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01148_179672-187068' '(at2g39780 : 288.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 176.0) no description available & (gnl|cdd|84778 : 153.0) no description available & (reliability: 576.0) & (original description: Putative ngr2, Description = Ribonuclease 2, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01300_127083-141435' '(at3g01410 : 266.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 120.0) no description available & (reliability: 532.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01372_553298-556170' '(at3g44260 : 363.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 325.0) no description available & (gnl|cdd|86737 : 252.0) no description available & (reliability: 726.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01702_397034-425620' '(at1g75660 : 1205.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 1063.0) no description available & (gnl|cdd|34654 : 700.0) no description available & (p23252|cr2_horvu : 94.4) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 2410.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = PF03159;PF00098)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01702_399308-401753' '(at1g75660 : 114.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 98.5) no description available & (reliability: 228.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01706_39249-54510' '(at3g46210 : 387.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 247.0) no description available & (gnl|cdd|31033 : 119.0) no description available & (reliability: 774.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01750_1621314-1626255' '(at5g22250 : 402.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G44260.1); Has 907 Blast hits to 897 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 150; Plants - 381; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 341.0) no description available & (gnl|cdd|86737 : 270.0) no description available & (reliability: 804.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01752_314684-321699' '(at3g20420 : 310.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|29697 : 128.0) no description available & (gnl|cdd|35920 : 126.0) no description available & (reliability: 620.0) & (original description: Putative RTL2, Description = Ribonuclease 3-like protein 2, PFAM = PF00636;PF00035)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01808_30347-40055' '(at1g24090 : 271.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 542.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02132_207374-223967' '(at1g74700 : 409.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing.; tRNAse Z1 (TRZ1); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT2G04530.1); Has 2024 Blast hits to 2024 proteins in 946 species: Archae - 244; Bacteria - 1574; Metazoa - 35; Fungi - 17; Plants - 82; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p60193|rnzn_wheat : 280.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 90.5) no description available & (reliability: 818.0) & (original description: Putative NUZ, Description = Nuclear ribonuclease Z, PFAM = PF12706)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02429_712128-758260' '(at1g77680 : 972.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (gnl|cdd|37313 : 490.0) no description available & (gnl|cdd|30903 : 360.0) no description available & (reliability: 1944.0) & (original description: Putative SOV, Description = Inactive exonuclease DIS3L2, PFAM = PF00773)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02563_661135-665995' '(at1g74700 : 367.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing.; tRNAse Z1 (TRZ1); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT2G04530.1); Has 2024 Blast hits to 2024 proteins in 946 species: Archae - 244; Bacteria - 1574; Metazoa - 35; Fungi - 17; Plants - 82; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p60193|rnzn_wheat : 257.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 96.7) no description available & (reliability: 734.0) & (original description: Putative NUZ, Description = Nuclear ribonuclease Z, PFAM = PF12706)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02634_339869-349056' '(at2g25100 : 424.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|37510 : 344.0) no description available & (gnl|cdd|85400 : 163.0) no description available & (reliability: 848.0) & (original description: Putative rnhB, Description = Ribonuclease, PFAM = PF01351)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02699_61837-69060' '(at1g03360 : 402.0) ribosomal RNA processing 4 (RRP4); FUNCTIONS IN: exonuclease activity; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 615 Blast hits to 615 proteins in 291 species: Archae - 147; Bacteria - 0; Metazoa - 136; Fungi - 134; Plants - 55; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38223 : 309.0) no description available & (gnl|cdd|31294 : 140.0) no description available & (reliability: 804.0) & (original description: Putative RRP4, Description = Exosome complex component RRP4 homolog, PFAM = PF15985)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03128_328657-338477' '(at1g75660 : 129.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (p23252|cr2_horvu : 92.0) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 258.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03374_680229-685974' '(at3g07750 : 392.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|36825 : 280.0) no description available & (gnl|cdd|32306 : 193.0) no description available & (reliability: 784.0) & (original description: Putative EXOSC7, Description = Exosome complex component RRP42, PFAM = PF01138;PF03725)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03747_237810-253556' '(at4g37510 : 808.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29697 : 90.0) no description available & (reliability: 1616.0) & (original description: Putative RNC1, Description = Ribonuclease III domain-containing protein RNC1, chloroplastic, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03918_105583-114976' '(at3g04480 : 889.0) endoribonucleases; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF71, ATP-binding domain (InterPro:IPR002761), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Endoribonuclease L-PSP (InterPro:IPR006175), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813); Has 2752 Blast hits to 2664 proteins in 980 species: Archae - 283; Bacteria - 1591; Metazoa - 282; Fungi - 177; Plants - 40; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|37527 : 377.0) no description available & (gnl|cdd|30181 : 254.0) no description available & (reliability: 1778.0) & (original description: Putative dph6, Description = Diphthine--ammonia ligase, PFAM = PF01042;PF01042;PF01902)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04082_145519-148934' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 248.0) no description available & (p83618|rn28_pangi : 109.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04138_231582-233958' '(at2g40815 : 152.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); Has 2829 Blast hits to 2399 proteins in 295 species: Archae - 0; Bacteria - 112; Metazoa - 998; Fungi - 464; Plants - 875; Viruses - 39; Other Eukaryotes - 341 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF00168)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04219_90987-123879' '(at1g16800 : 981.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 9771 Blast hits to 8579 proteins in 1344 species: Archae - 197; Bacteria - 2032; Metazoa - 2727; Fungi - 1277; Plants - 815; Viruses - 364; Other Eukaryotes - 2359 (source: NCBI BLink). & (gnl|cdd|37012 : 247.0) no description available & (gnl|cdd|31309 : 204.0) no description available & (reliability: 1962.0) & (original description: Putative TCM_027751, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative, PFAM = PF13087;PF13086;PF12726)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04296_147710-150313' '(at1g24450 : 149.0) NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative NFD2, Description = Ribonuclease 3 family protein, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04339_685933-691086' '(at3g20390 : 219.0) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|37528 : 141.0) no description available & (gnl|cdd|85205 : 141.0) no description available & (reliability: 438.0) & (original description: Putative RIDA, Description = Reactive Intermediate Deaminase A, chloroplastic, PFAM = PF01042)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04418_1102505-1114303' '(at2g39780 : 292.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 208.0) no description available & (gnl|cdd|84778 : 186.0) no description available & (reliability: 584.0) & (original description: Putative sl28, Description = S-like RNase, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04473_1432257-1442283' '(at2g40820 : 545.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1090.0) & (original description: Putative SCAB3, Description = Stomatal closure-related actin-binding protein 3, PFAM = PF16709;PF16712;PF16711)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04626_203283-210784' '(at3g01410 : 247.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 106.0) no description available & (reliability: 494.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05157_514328-516861' '(at2g02990 : 82.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ngr3, Description = Ribonuclease T2 family protein, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05407_105809-112880' '(at3g25430 : 572.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G55870.1); Has 339 Blast hits to 335 proteins in 120 species: Archae - 0; Bacteria - 10; Metazoa - 154; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37201 : 147.0) no description available & (gnl|cdd|86737 : 86.1) no description available & (reliability: 1144.0) & (original description: Putative At3g25430, Description = Poly(A)-specific ribonuclease PARN-like, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05712_347574-350921' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 248.0) no description available & (p83618|rn28_pangi : 110.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06045_52306-97695' '(at1g55140 : 239.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.6) no description available & (reliability: 478.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06045_69351-83700' '(at1g55140 : 122.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative pco123324, Description = RNA binding protein, putative, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06482_114608-128084' '(at5g02250 : 922.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 288.0) no description available & (gnl|cdd|30903 : 264.0) no description available & (reliability: 1844.0) & (original description: Putative RNR1, Description = Ribonuclease II, chloroplastic/mitochondrial, PFAM = PF00773)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06590_129947-139277' '(at5g59980 : 406.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), RNase P subunit p30 (InterPro:IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species: Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source: NCBI BLink). & (gnl|cdd|37574 : 140.0) no description available & (gnl|cdd|85737 : 133.0) no description available & (reliability: 812.0) & (original description: Putative RPP30, Description = Ribonuclease P protein subunit p30, PFAM = PF01876)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06725_278115-287253' '(at1g55870 : 696.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 198.0) no description available & (gnl|cdd|86737 : 104.0) no description available & (reliability: 1392.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06738_287772-294296' '(at1g60080 : 388.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1508 Blast hits to 1508 proteins in 331 species: Archae - 402; Bacteria - 40; Metazoa - 363; Fungi - 232; Plants - 181; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|36826 : 327.0) no description available & (gnl|cdd|32306 : 172.0) no description available & (reliability: 776.0) & (original description: Putative BnaCnng31490D, Description = BnaCnng31490D protein, PFAM = PF03725;PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06976_293711-296535' '(at1g80780 : 455.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G32070.1). & (gnl|cdd|35525 : 381.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 910.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07152_543763-550805' '(at2g04530 : 431.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.; CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p60193|rnzn_wheat : 239.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 97.0) no description available & (reliability: 862.0) & (original description: Putative CPZ, Description = Ribonuclease Z, chloroplastic, PFAM = PF12706)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07474_99503-118871' '(at5g25800 : 623.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37459 : 224.0) no description available & (gnl|cdd|47785 : 109.0) no description available & (reliability: 1246.0) & (original description: Putative SDN5, Description = Small RNA degrading nuclease 5, PFAM = PF00929)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07590_445081-450988' '(at1g54490 : 199.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 162.0) no description available & (gnl|cdd|34654 : 117.0) no description available & (reliability: 366.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07741_272420-283414' '(at2g43190 : 119.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (reliability: 238.0) & (original description: Putative At2g43190, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08034_213719-216555' '(at5g22250 : 390.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G44260.1); Has 907 Blast hits to 897 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 150; Plants - 381; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 333.0) no description available & (gnl|cdd|86737 : 260.0) no description available & (reliability: 780.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08483_93300-160438' '(at1g55870 : 709.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 199.0) no description available & (gnl|cdd|86737 : 103.0) no description available & (reliability: 1418.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08504_507990-523266' '(at3g60500 : 417.0) Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.; ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3). & (gnl|cdd|36827 : 337.0) no description available & (gnl|cdd|32306 : 236.0) no description available & (reliability: 834.0) & (original description: Putative RRP45B, Description = Exosome complex component RRP45B, PFAM = PF03725;PF01138)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf09315_170965-173789' '(at2g32070 : 452.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 383.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 904.0) & (original description: Putative cnot8, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf09597_118798-124826' '(at2g02990 : 248.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 236.0) no description available & (gnl|cdd|36855 : 231.0) no description available & (p83618|rn28_pangi : 107.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 496.0) & (original description: Putative RNALX, Description = Intracellular ribonuclease LX, PFAM = PF00445)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10055_519850-535255' '(at1g31500 : 455.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31530.1); Has 1261 Blast hits to 1240 proteins in 208 species: Archae - 0; Bacteria - 12; Metazoa - 523; Fungi - 244; Plants - 247; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|35839 : 212.0) no description available & (gnl|cdd|34836 : 159.0) no description available & (reliability: 910.0) & (original description: Putative CCR4-4, Description = Carbon catabolite repressor protein 4 homolog 4, PFAM = PF03372)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10336_356621-365688' '(at1g24090 : 300.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 115.0) no description available & (reliability: 600.0) & (original description: Putative rnhA, Description = RNase H domain-containing protein, PFAM = PF13456)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10475_90591-95241' '(at3g20420 : 325.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|35920 : 141.0) no description available & (gnl|cdd|80512 : 129.0) no description available & (reliability: 650.0) & (original description: Putative RTL2, Description = Ribonuclease 3-like protein 2, PFAM = PF14709;PF00035;PF00636)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10557_44610-52133' '(at2g04530 : 431.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.; CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p60193|rnzn_wheat : 240.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 100.0) no description available & (reliability: 862.0) & (original description: Putative CPZ, Description = Ribonuclease Z, chloroplastic, PFAM = PF12706)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11009_167070-179612' '(at2g43190 : 229.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 88.2) no description available & (reliability: 458.0) & (original description: Putative Sb09g023150, Description = Putative uncharacterized protein Sb09g023150, PFAM = PF01868)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11825_59882-78374' '(at1g75660 : 1215.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 1082.0) no description available & (gnl|cdd|34654 : 711.0) no description available & (p23252|cr2_horvu : 113.0) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 2430.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = PF00098;PF03159)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11909_12234-15055' '(at2g32070 : 446.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 377.0) no description available & (gnl|cdd|86737 : 289.0) no description available & (reliability: 892.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf12714_83505-86220' '(at1g24450 : 165.0) NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative NFD2, Description = Protein NUCLEAR FUSION DEFECTIVE 2, PFAM = PF14622)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf17478_25447-28319' '(at3g44260 : 364.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 324.0) no description available & (gnl|cdd|86737 : 254.0) no description available & (reliability: 728.0) & (original description: Putative caf1, Description = Ribonuclease CAF1, PFAM = PF04857)' T
'27.1.19' 'RNA.processing.ribonucleases' 'niben101scf22099_93553-124525' '(at4g15417 : 137.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|29697 : 87.6) no description available & (reliability: 274.0) & (original description: Putative ASU1, Description = Ribonuclease 3-like protein 3, PFAM = PF00636)' T
'27.1.20' 'RNA.processing.degradation dicer' 'nbv0.5scaffold31_1383814-1434824' '(at3g43920 : 1320.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (gnl|cdd|35920 : 424.0) no description available & (gnl|cdd|31308 : 157.0) no description available & (reliability: 2640.0) & (original description: Putative DCL3A, Description = Endoribonuclease Dicer homolog 3a, PFAM = PF03368;PF00636;PF00636;PF00271;PF02170;PF00270)' T
'27.1.20' 'RNA.processing.degradation dicer' 'niben101scf03304_140433-163766' '(at1g01040 : 2631.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (gnl|cdd|35920 : 560.0) no description available & (gnl|cdd|31308 : 181.0) no description available & (reliability: 5262.0) & (original description: Putative DCL1, Description = Endoribonuclease Dicer homolog 1, PFAM = PF14709;PF02170;PF03368;PF04851;PF00271;PF00636;PF00636;PF00035)' T
'27.1.20' 'RNA.processing.degradation dicer' 'niben101scf06666_84660-145532' '(at3g43920 : 1264.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (gnl|cdd|35920 : 405.0) no description available & (gnl|cdd|31308 : 142.0) no description available & (reliability: 2528.0) & (original description: Putative DCL3A, Description = Endoribonuclease Dicer homolog 3a, PFAM = PF00271;PF02170;PF03368;PF00636;PF00636;PF00270)' T
'27.1.20' 'RNA.processing.degradation dicer' 'niben101scf08272_132616-145669' '(at3g03300 : 1504.0) Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.; dicer-like 2 (DCL2); FUNCTIONS IN: in 7 functions; INVOLVED IN: defense response to virus, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 4 (TAIR:AT5G20320.1). & (gnl|cdd|35920 : 526.0) no description available & (gnl|cdd|31308 : 163.0) no description available & (reliability: 3008.0) & (original description: Putative dcl2, Description = Dicer-like protein 2, PFAM = PF00271;PF03368;PF00270;PF00636;PF00636;PF02170)' T
'27.1.20' 'RNA.processing.degradation dicer' 'niben101scf11936_114183-166860' '(at5g20320 : 1573.0) Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.; dicer-like 4 (DCL4); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 2 (TAIR:AT3G03300.3). & (gnl|cdd|35920 : 474.0) no description available & (gnl|cdd|31308 : 161.0) no description available & (reliability: 3146.0) & (original description: Putative DCL4, Description = Dicer-like protein 4, PFAM = PF00636;PF00636;PF14709;PF00271;PF00270;PF03368)' T
'27.1.21' 'RNA.processing.siRNA methyltransferase' 'nbv0.3scaffold67687_1-7387' '(at3g21300 : 526.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|37398 : 310.0) no description available & (gnl|cdd|32446 : 268.0) no description available & (reliability: 1052.0) & (original description: Putative rumA, Description = RNA methyltransferase, TrmA family, PFAM = PF05958)' T
'27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben044scf00021368ctg000_1-8714' '(at4g20910 : 630.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 161.0) no description available & (reliability: 1260.0) & (original description: Putative HEN1, Description = Small RNA 2'-O-methyltransferase, PFAM = )' T
'27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf01061_813837-832184' '(at4g20910 : 742.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 158.0) no description available & (reliability: 1484.0) & (original description: Putative CRM2, Description = Small RNA 2'-O-methyltransferase, PFAM = )' T
'27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf01395_94082-105728' '(at4g20910 : 798.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 156.0) no description available & (reliability: 1596.0) & (original description: Putative HEN1, Description = Small RNA 2'-O-methyltransferase, PFAM = PF13489)' T
'27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf20904_1-2688' '(at3g21300 : 240.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|37398 : 119.0) no description available & (gnl|cdd|32446 : 92.7) no description available & (reliability: 480.0) & (original description: Putative At3g21300, Description = Putative RNA methyltransferase, PFAM = )' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold1418_77187-83241' '(at4g24440 : 178.0) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q94hl5|t2ag_orysa : 168.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (gnl|cdd|38673 : 151.0) no description available & (gnl|cdd|34724 : 107.0) no description available & (reliability: 356.0) & (original description: Putative Tf2aS, Description = Transcription initiation factor IIA subunit 2, PFAM = PF02751;PF02268)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold5854_54907-61171' '(at3g46780 : 439.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 144.0) no description available & (reliability: 878.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold12610_10135-24475' '(at3g52270 : 258.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 202.0) no description available & (gnl|cdd|66000 : 95.1) no description available & (reliability: 478.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold18418_4397-11293' '(at1g75510 : 309.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 230.0) no description available & (gnl|cdd|34693 : 118.0) no description available & (reliability: 618.0) & (original description: Putative BnaC02g24370D, Description = BnaC02g24370D protein, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold19212_28052-33125' '(at5g39840 : 528.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 379.0) no description available & (reliability: 1056.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold20902_1-15090' '(at3g52090 : 191.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 157.0) no description available & (reliability: 382.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold21119_570-19506' '(at1g63020 : 1288.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 679.0) no description available & (gnl|cdd|82682 : 239.0) no description available & (reliability: 2576.0) & (original description: Putative NRPD1, Description = DNA-directed RNA polymerase IV subunit 1, PFAM = PF04997;PF11523;PF04983;PF05000;PF00623)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold21200_23468-30733' '(at4g13670 : 252.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold24794_144-2731' '(at4g14660 : 121.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 108.0) no description available & (reliability: 242.0) & (original description: Putative)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold33218_16293-40825' '(at1g29940 : 1583.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1304.0) no description available & (gnl|cdd|30434 : 523.0) no description available & (q85x54|rpob_pinko : 80.5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3166.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF04561;PF04563;PF00562;PF06883)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold36113_1124-7934' '(at5g45140 : 1770.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (gnl|cdd|35436 : 1734.0) no description available & (gnl|cdd|82681 : 956.0) no description available & (q85fm7|rpob_adica : 171.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 3540.0) & (original description: Putative NRPC2, Description = DNA-directed RNA polymerase III subunit 2, PFAM = PF00562;PF04560;PF04565;PF04563;PF04566;PF04561;PF04567)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold36184_16605-23498' '(at5g43130 : 254.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 161.0) no description available & (gnl|cdd|37552 : 90.9) no description available & (reliability: 508.0) & (original description: Putative TAF4, Description = Transcription initiation factor TFIID subunit 4, PFAM = PF05236)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold36956_8788-17989' '(at5g43130 : 432.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 179.0) no description available & (reliability: 864.0) & (original description: Putative TAF4B, Description = Transcription initiation factor TFIID subunit 4b, PFAM = PF12174;PF05236)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold49478_3158-9204' '(at1g75510 : 165.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 330.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold51040_6608-14810' '(at5g60040 : 151.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 149.0) no description available & (gnl|cdd|82682 : 81.4) no description available & (reliability: 302.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04983)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold51724_1-12288' '(at3g21350 : 239.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 123.0) no description available & (gnl|cdd|68505 : 108.0) no description available & (reliability: 478.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold55382_506-9126' '(at3g15390 : 246.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 492.0) & (original description: Putative , Description = , PFAM = PF08590)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold56439_2539-9045' '(at1g60620 : 497.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 432.0) no description available & (gnl|cdd|47937 : 216.0) no description available & (reliability: 994.0) & (original description: Putative polr1c, Description = DNA-directed RNA polymerases I and III subunit rpac1, PFAM = PF01193;PF01000)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold58936_7281-12224' '(at4g20330 : 308.0) Transcription initiation factor TFIIE, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIIE, beta subunit (InterPro:IPR016656), Transcription factor TFIIE beta subunit, DNA-binding domain (InterPro:IPR003166); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIIE, beta subunit (TAIR:AT4G21010.1); Has 316 Blast hits to 316 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 101; Plants - 70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|38305 : 207.0) no description available & (reliability: 616.0) & (original description: Putative Sb06g028040, Description = Transcription initiation factor IIE subunit beta, PFAM = PF02186)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold61410_4454-10831' '(at2g40030 : 249.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative RPE1, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold63307_1913-4422' '(at3g57660 : 129.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|35483 : 120.0) no description available & (reliability: 258.0) & (original description: Putative BnaC08g28670D, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold71180_2867-9032' '(at2g15430 : 504.0) Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.; NRPB3; FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1); Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243; Bacteria - 1; Metazoa - 278; Fungi - 347; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36735 : 356.0) no description available & (gnl|cdd|47937 : 201.0) no description available & (reliability: 1008.0) & (original description: Putative NRPB3, Description = DNA-directed RNA polymerases II, IV and V subunit 3, PFAM = PF01193;PF01000)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold71401_780-8987' '(at3g15390 : 162.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 324.0) & (original description: Putative , Description = , PFAM = PF08590)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold85937_1760-6097' '(at5g60040 : 476.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 476.0) no description available & (gnl|cdd|82682 : 364.0) no description available & (q8wi25|rpoc1_psinu : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Psilotum nudum (Whisk fern) & (reliability: 952.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997;PF00623;PF04983)' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold99022_891-4068' '(at3g23590 : 137.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative REF4, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T
'27.2' 'RNA.transcription' 'nbv0.3scaffold119237_1-2226' '(gnl|cdd|35483 : 90.8) no description available & (at3g57660 : 81.3) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative glysoja_033066, Description = DNA-directed RNA polymerase subunit, PFAM = )' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold70_1505758-1525078' '(at3g23780 : 1425.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1074.0) no description available & (gnl|cdd|82681 : 641.0) no description available & (q85fm7|rpob_adica : 103.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 2850.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF00562;PF04561;PF04566;PF04567;PF04565;PF04563;PF04560)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold190_610728-623027' '(at3g21350 : 268.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 129.0) no description available & (gnl|cdd|68505 : 111.0) no description available & (reliability: 536.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold540_254041-290441' '(at1g60620 : 447.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 388.0) no description available & (gnl|cdd|47937 : 179.0) no description available & (reliability: 894.0) & (original description: Putative polr1c, Description = DNA-directed RNA polymerases I and III subunit rpac1, PFAM = PF01193;PF01000)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold622_548378-564719' '(at3g23780 : 1590.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1174.0) no description available & (gnl|cdd|82681 : 692.0) no description available & (p56299|rpob_chlvu : 135.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 3180.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF04566;PF04565;PF04561;PF04567;PF04560;PF00562;PF04563)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold783_479166-484058' '(at2g29540 : 130.0) RNA polymerase I(A) and III(C) 14 kDa subunit; RNApolymerase 14 kDa subunit (RPC14); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: tRNA transcription; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); Has 159 Blast hits to 159 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 5; Plants - 54; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|38648 : 129.0) no description available & (reliability: 260.0) & (original description: Putative RPC19, Description = RNA polymerase subunit, PFAM = PF13656)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold939_2812-23698' '(at3g09360 : 373.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 261.0) no description available & (gnl|cdd|31595 : 110.0) no description available & (reliability: 746.0) & (original description: Putative MEE65, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF07741;PF00382)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold999_514702-516746' '(p06269|rpoa_tobac : 648.0) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79232 : 631.0) no description available & (atcg00740 : 510.0) RNA polymerase alpha subunit; RNA polymerase subunit alpha (RPOA); FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, alpha subunit (InterPro:IPR011773), RNA polymerase, alpha subunit, C-terminal (InterPro:IPR011260), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (reliability: 1020.0) & (original description: Putative rpoA, Description = DNA-directed RNA polymerase subunit alpha, PFAM = PF03118;PF01000;PF01193)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1007_188709-197173' '(at4g14660 : 267.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 190.0) no description available & (gnl|cdd|31292 : 91.4) no description available & (p46279|rpb7_soybn : 88.2) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (reliability: 534.0) & (original description: Putative NRPE7, Description = DNA-directed RNA polymerase V subunit 7, PFAM = PF03876)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1072_13053-25620' '(at5g60040 : 276.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 260.0) no description available & (gnl|cdd|82682 : 123.0) no description available & (reliability: 552.0) & (original description: Putative RPC1, Description = RNA polymerase III large subunit, PFAM = PF04983)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1102_19677-416461' '(at5g43130 : 310.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 169.0) no description available & (gnl|cdd|37552 : 84.8) no description available & (reliability: 620.0) & (original description: Putative BnaC04g17340D, Description = BnaC04g17340D protein, PFAM = PF05236)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1106_321543-325220' '(at5g41010 : 82.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.; NRPB12; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, nucleus, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rbp10 (InterPro:IPR006591); BEST Arabidopsis thaliana protein match is: DNA directed RNA polymerase, 7 kDa subunit (TAIR:AT1G53690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative NRPB12, Description = DNA-directed RNA polymerases II, IV and V subunit 12, PFAM = PF03604)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1485_331622-344881' '(at1g54250 : 141.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 132.0) no description available & (gnl|cdd|86462 : 126.0) no description available & (reliability: 282.0) & (original description: Putative rpb8, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC3, PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold1845_94815-129038' '(at2g40030 : 1098.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 360.0) no description available & (gnl|cdd|82682 : 123.0) no description available & (reliability: 2196.0) & (original description: Putative KTF1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04983;PF11523;PF04998;PF04997)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold2587_19742-32508' '(at3g57080 : 189.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38428 : 164.0) no description available & (gnl|cdd|67484 : 91.9) no description available & (reliability: 378.0) & (original description: Putative RPB5B, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold2650_185381-211693' '(at3g49000 : 370.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 216.0) no description available & (gnl|cdd|69183 : 122.0) no description available & (reliability: 740.0) & (original description: Putative BnaC03g52680D, Description = BnaC03g52680D protein, PFAM = PF05645;PF08221)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold3060_210580-222198' '(gnl|cdd|38428 : 228.0) no description available & (at3g57080 : 215.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|67484 : 92.2) no description available & (reliability: 430.0) & (original description: Putative NRPE5A, Description = DNA-directed RNA polymerase V subunit 5A, PFAM = PF03871;PF01191)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold3132_138178-161838' '(at2g40030 : 1642.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 709.0) no description available & (gnl|cdd|82682 : 252.0) no description available & (reliability: 3284.0) & (original description: Putative NRPE1, Description = DNA-directed RNA polymerase V subunit 1, PFAM = PF04997;PF04983;PF00623;PF11523;PF04998)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold3855_144368-158402' '(at3g23590 : 1371.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2742.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold3881_36049-40445' '(at3g57660 : 216.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|35483 : 199.0) no description available & (gnl|cdd|47938 : 145.0) no description available & (reliability: 432.0) & (original description: Putative nuc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF00623)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4197_54021-59721' '(at1g06790 : 241.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 211.0) no description available & (gnl|cdd|31292 : 118.0) no description available & (reliability: 482.0) & (original description: Putative RPB7B, Description = DNA-directed RNA polymerase II, 19 kDa polypeptide, PFAM = PF08292;PF03876)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4265_15922-41119' '(at3g09360 : 416.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 316.0) no description available & (gnl|cdd|31595 : 142.0) no description available & (reliability: 832.0) & (original description: Putative BnaC04g00230D, Description = BnaC04g00230D protein, PFAM = PF07741;PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4265_16222-41131' '(at3g09360 : 416.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 315.0) no description available & (gnl|cdd|31595 : 141.0) no description available & (reliability: 832.0) & (original description: Putative Os05g0305100, Description = Os05g0305100 protein, PFAM = PF00382;PF00382;PF07741)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4265_20082-39513' '(at3g09360 : 310.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 244.0) no description available & (gnl|cdd|31595 : 108.0) no description available & (reliability: 620.0) & (original description: Putative brf1, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF00382;PF00382;PF07741)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4285_56621-69230' '(at1g03280 : 452.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 298.0) no description available & (gnl|cdd|47832 : 123.0) no description available & (reliability: 904.0) & (original description: Putative Os08g0343300, Description = Os08g0343300 protein, PFAM = PF02002)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4421_89342-125425' '(q8l6j1|rpo3b_tobac : 267.0) DNA-directed RNA polymerase 3B, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3B) (NictaRpoT3-tom) - Nicotiana tabacum (Common tobacco) & (at2g24120 : 236.0) SCABRA 3 (SCA3); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1); Has 1200 Blast hits to 1186 proteins in 332 species: Archae - 0; Bacteria - 40; Metazoa - 130; Fungi - 220; Plants - 200; Viruses - 136; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|36256 : 217.0) no description available & (gnl|cdd|85138 : 156.0) no description available & (reliability: 472.0) & (original description: Putative rpmA, Description = DNA-directed RNA polymerase, PFAM = PF00940)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4476_127797-165700' '(at1g54250 : 82.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|86462 : 81.2) no description available & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4617_264005-269492' '(at5g39840 : 1003.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 756.0) no description available & (reliability: 2006.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513;PF00271)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold4865_60273-66641' '(at4g13670 : 182.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold5984_16293-41261' '(at1g29940 : 1668.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1419.0) no description available & (gnl|cdd|30434 : 611.0) no description available & (q85x54|rpob_pinko : 111.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3336.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF00562;PF04560;PF04561;PF06883;PF04563)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold6085_33744-45807' '(at3g15390 : 216.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 432.0) & (original description: Putative , Description = , PFAM = PF08590)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold7524_59511-65775' '(at3g46780 : 399.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 120.0) no description available & (reliability: 798.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold10083_3476-10716' '(gnl|cdd|35482 : 326.0) no description available & (at5g60040 : 287.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|81352 : 180.0) no description available & (reliability: 574.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold10564_1-3997' '(gnl|cdd|79237 : 1374.0) no description available & (q3c1g8|rpoc1_nicsy : 1344.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nicotiana sylvestris (Wood tobacco) & (atcg00180 : 1250.0) RNA polymerase beta' subunit-1; RPOC1; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1). & (gnl|cdd|35481 : 173.0) no description available & (reliability: 2500.0) & (original description: Putative rpoC1, Description = DNA-directed RNA polymerase subunit beta', PFAM = PF04997;PF00623;PF00623;PF04983)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold10564_1287-4821' '(gnl|cdd|79225 : 533.0) no description available & (q8s8y1|rpoc2_atrbe : 468.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00170 : 457.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (gnl|cdd|35483 : 105.0) no description available & (reliability: 914.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04983;PF04983;PF04998;PF00623;PF05000)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold10564_2345-5690' '(gnl|cdd|79225 : 1019.0) no description available & (q3c1g9|rpoc2_nicsy : 912.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana sylvestris (Wood tobacco) & (atcg00170 : 813.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 1626.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit, PFAM = PF05000;PF04998)' T
'27.2' 'RNA.transcription' 'nbv0.5scaffold10587_3348-6241' '(at3g23780 : 374.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 311.0) no description available & (gnl|cdd|73223 : 286.0) no description available & (q9tl06|rpob_nepol : 82.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Nephroselmis olivacea & (reliability: 748.0) & (original description: Putative rpb2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04560;PF00562;PF00562)' T
'27.2' 'RNA.transcription' 'niben044scf00000673ctg001_595-6761' '(at2g40030 : 244.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative RPE1, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T
'27.2' 'RNA.transcription' 'niben044scf00000940ctg005_1368-8426' '(at3g52090 : 194.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 159.0) no description available & (reliability: 388.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T
'27.2' 'RNA.transcription' 'niben044scf00001920ctg000_1219-10677' '(at1g17440 : 186.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|86457 : 112.0) no description available & (gnl|cdd|36357 : 88.2) no description available & (reliability: 372.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T
'27.2' 'RNA.transcription' 'niben044scf00003670ctg000_948-10911' '(at5g49530 : 378.0) SIN-like family protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68376 : 287.0) no description available & (gnl|cdd|37565 : 160.0) no description available & (reliability: 756.0) & (original description: Putative PGSC0003DMG400004762, Description = DNA-directed RNA polymerase III subunit RPC5, PFAM = PF04801)' T
'27.2' 'RNA.transcription' 'niben044scf00004369ctg025_1162-11506' '(at1g29940 : 588.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 508.0) no description available & (gnl|cdd|30434 : 232.0) no description available & (reliability: 1176.0) & (original description: Putative rpa2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF00562;PF04560;PF06883;PF04565)' T
'27.2' 'RNA.transcription' 'niben044scf00007491ctg003_10862-16233' '(at1g03280 : 160.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 113.0) no description available & (reliability: 320.0) & (original description: Putative RCOM_0387250, Description = Transcription initiation factor iie, alpha subunit, putative, PFAM = )' T
'27.2' 'RNA.transcription' 'niben044scf00007491ctg004_515-4970' '(at1g03280 : 296.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 187.0) no description available & (gnl|cdd|47832 : 116.0) no description available & (reliability: 592.0) & (original description: Putative glysoja_049822, Description = General transcription factor IIE subunit 1, PFAM = PF02002)' T
'27.2' 'RNA.transcription' 'niben044scf00007554ctg001_9725-17104' '(at3g23590 : 1048.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2096.0) & (original description: Putative Med5b, Description = Mediator of RNA polymerase II transcription subunit 5-like protein, PFAM = )' T
'27.2' 'RNA.transcription' 'niben044scf00008103ctg013_1287-34753' '(gnl|cdd|35482 : 1515.0) no description available & (at5g60040 : 1464.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|82682 : 648.0) no description available & (q8wi25|rpoc1_psinu : 94.4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Psilotum nudum (Whisk fern) & (reliability: 2928.0) & (original description: Putative NRPC1, Description = DNA-directed RNA polymerase III subunit 1, PFAM = PF04983;PF05000;PF04997;PF00623;PF04998)' T
'27.2' 'RNA.transcription' 'niben044scf00008103ctg013_7006-15162' '(gnl|cdd|35482 : 592.0) no description available & (at5g60040 : 547.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|82682 : 268.0) no description available & (reliability: 1094.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998;PF05000)' T
'27.2' 'RNA.transcription' 'niben044scf00008103ctg014_1-3948' '(at5g60040 : 228.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 198.0) no description available & (gnl|cdd|86768 : 130.0) no description available & (reliability: 456.0) & (original description: Putative RPC1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T
'27.2' 'RNA.transcription' 'niben044scf00009304ctg008_2592-10634' '(at4g10070 : 274.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 138.0) no description available & (reliability: 548.0) & (original description: Putative F14M2.18, Description = F14M2.18 protein, PFAM = PF00013;PF00013)' T
'27.2' 'RNA.transcription' 'niben044scf00010125ctg001_19963-29448' '(at4g35800 : 2739.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (gnl|cdd|35481 : 2318.0) no description available & (gnl|cdd|82682 : 947.0) no description available & (q9tl05|rpoc1_nepol : 143.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 5478.0) & (original description: Putative NRPB1, Description = DNA-directed RNA polymerase II subunit 1, PFAM = PF04998;PF05000;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF04983;PF04992;PF04990;PF04997;PF00623)' T
'27.2' 'RNA.transcription' 'niben044scf00010383ctg018_21971-33213' '(at1g54250 : 80.9) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|86462 : 80.4) no description available & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'niben044scf00010903ctg011_2456-12886' '(gnl|cdd|69325 : 221.0) no description available & (gnl|cdd|37604 : 192.0) no description available & (at4g12610 : 122.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RAP74, Description = Transcription initiation factor IIF subunit alpha, PFAM = PF05793;PF05793)' T
'27.2' 'RNA.transcription' 'niben044scf00011134ctg025_1-4976' '(at2g40030 : 123.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative DMS5, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T
'27.2' 'RNA.transcription' 'niben044scf00011699ctg008_1-11571' '(at5g60040 : 267.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 239.0) no description available & (gnl|cdd|86768 : 139.0) no description available & (reliability: 534.0) & (original description: Putative RPC1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T
'27.2' 'RNA.transcription' 'niben044scf00011797ctg006_437-5775' '(at1g60620 : 488.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 428.0) no description available & (gnl|cdd|47937 : 213.0) no description available & (reliability: 976.0) & (original description: Putative rpa5, Description = RNA polymerase III subunit, PFAM = PF01193;PF01000)' T
'27.2' 'RNA.transcription' 'niben044scf00013449ctg003_4369-12056' '(at4g10070 : 296.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 134.0) no description available & (reliability: 592.0) & (original description: Putative At1g33680, Description = KH domain-containing protein, PFAM = PF00013;PF00013)' T
'27.2' 'RNA.transcription' 'niben044scf00013961ctg001_1-5192' '(at1g26665 : 176.0) Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38256 : 164.0) no description available & (reliability: 320.0) & (original description: Putative MED10B, Description = Mediator of RNA polymerase II transcription subunit 10b, PFAM = PF09748)' T
'27.2' 'RNA.transcription' 'niben044scf00029082ctg002_3913-11931' '(at1g63020 : 866.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 546.0) no description available & (gnl|cdd|82682 : 242.0) no description available & (reliability: 1732.0) & (original description: Putative BnaC09g51200D, Description = DNA-directed RNA polymerase subunit, PFAM = PF00623;PF04997;PF04983;PF05000)' T
'27.2' 'RNA.transcription' 'niben044scf00032196ctg002_3895-9374' '(at4g36650 : 541.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 307.0) no description available & (gnl|cdd|31595 : 140.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'niben044scf00035246ctg002_4797-7738' '(at3g22320 : 226.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 204.0) no description available & (gnl|cdd|65020 : 92.6) no description available & (reliability: 452.0) & (original description: Putative POLR2E, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T
'27.2' 'RNA.transcription' 'niben044scf00043672ctg001_1-8939' '(q8l6j5|rpo1b_tobac : 1050.0) DNA-directed RNA polymerase 1B, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 1B) (NictaRpoT1-tom) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36256 : 882.0) no description available & (at5g15700 : 868.0) Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.; DNA/RNA polymerases superfamily protein; FUNCTIONS IN: RNA polymerase activity, DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion, chloroplast, thylakoid membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1). & (gnl|cdd|34711 : 539.0) no description available & (reliability: 1736.0) & (original description: Putative NEP, Description = DNA-directed RNA polymerase, PFAM = PF00940)' T
'27.2' 'RNA.transcription' 'niben044scf00046031ctg004_1-3754' '(at4g21710 : 705.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (gnl|cdd|35435 : 506.0) no description available & (gnl|cdd|86686 : 306.0) no description available & (reliability: 1410.0) & (original description: Putative polr2b, Description = Polr2b protein, PFAM = PF04561;PF04563)' T
'27.2' 'RNA.transcription' 'niben044scf00048158ctg009_375-2926' '(at4g14660 : 266.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 185.0) no description available & (gnl|cdd|31292 : 89.5) no description available & (p46279|rpb7_soybn : 86.7) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (reliability: 532.0) & (original description: Putative NRPE7, Description = DNA-directed RNA polymerase V subunit 7, PFAM = PF03876)' T
'27.2' 'RNA.transcription' 'niben044scf00052083ctg000_6254-13019' '(at4g31720 : 188.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 137.0) no description available & (gnl|cdd|34763 : 87.1) no description available & (reliability: 376.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T
'27.2' 'RNA.transcription' 'niben044scf00054892ctg001_9653-15284' '(at4g20280 : 181.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 133.0) no description available & (gnl|cdd|68297 : 121.0) no description available & (reliability: 362.0) & (original description: Putative TAF11B, Description = Transcription initiation factor TFIID subunit 11b, PFAM = PF04719)' T
'27.2' 'RNA.transcription' 'niben101scf00043_129393-139709' '(at4g20280 : 182.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 127.0) no description available & (gnl|cdd|68297 : 122.0) no description available & (reliability: 364.0) & (original description: Putative TAF11, Description = Transcription initiation factor TFIID subunit 11, PFAM = PF04719)' T
'27.2' 'RNA.transcription' 'niben101scf00201_194704-218697' '(at3g09360 : 434.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 316.0) no description available & (gnl|cdd|31595 : 149.0) no description available & (reliability: 868.0) & (original description: Putative brf1, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF00382;PF00382;PF07741)' T
'27.2' 'RNA.transcription' 'niben101scf00258_192139-197319' '(at5g39840 : 1016.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 756.0) no description available & (reliability: 2032.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513;PF00271)' T
'27.2' 'RNA.transcription' 'niben101scf00375_150544-161389' '(at3g10070 : 198.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.; TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink). & (gnl|cdd|86457 : 124.0) no description available & (gnl|cdd|36357 : 112.0) no description available & (reliability: 396.0) & (original description: Putative TAF12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T
'27.2' 'RNA.transcription' 'niben101scf00414_880236-884939' '(at1g60620 : 439.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 385.0) no description available & (gnl|cdd|47937 : 178.0) no description available & (reliability: 878.0) & (original description: Putative Polr1c, Description = DNA-directed RNA polymerases I and III subunit RPAC1, PFAM = PF01000;PF01193)' T
'27.2' 'RNA.transcription' 'niben101scf00426_224476-234527' '(gnl|cdd|69325 : 214.0) no description available & (gnl|cdd|37604 : 186.0) no description available & (at4g12610 : 120.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative RAP74, Description = Transcription initiation factor IIF subunit alpha, PFAM = PF05793;PF05793)' T
'27.2' 'RNA.transcription' 'niben101scf00492_15863-21985' '(at3g10330 : 463.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 458.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 371.0) no description available & (gnl|cdd|31595 : 207.0) no description available & (reliability: 926.0) & (original description: Putative TFIIB1, Description = Transcription initiation factor IIB, PFAM = PF00382;PF00382;PF08271)' T
'27.2' 'RNA.transcription' 'niben101scf00542_502978-508391' '(at5g39840 : 1013.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 751.0) no description available & (reliability: 2026.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF00271;PF12513)' T
'27.2' 'RNA.transcription' 'niben101scf00626_138676-159925' '(at3g49000 : 313.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 185.0) no description available & (gnl|cdd|69183 : 124.0) no description available & (reliability: 626.0) & (original description: Putative BnaC03g52680D, Description = BnaC03g52680D protein, PFAM = PF08221;PF05645)' T
'27.2' 'RNA.transcription' 'niben101scf00630_494316-502173' '(at1g54250 : 180.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 159.0) no description available & (gnl|cdd|86462 : 154.0) no description available & (reliability: 360.0) & (original description: Putative NRPB8B, Description = DNA-directed RNA polymerases II, IV and V subunit 8B, PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'niben101scf00662_134719-139858' '(q3c1g9|rpoc2_nicsy : 1280.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|79225 : 1218.0) no description available & (atcg00170 : 1010.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 2020.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04998)' T
'27.2' 'RNA.transcription' 'niben101scf00713_302215-307324' '(at5g51940 : 164.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|38615 : 145.0) no description available & (reliability: 328.0) & (original description: Putative pol, Description = DNA-directed RNA polymerase IIa, PFAM = PF01192)' T
'27.2' 'RNA.transcription' 'niben101scf00747_414231-419158' '(at1g17440 : 162.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|36357 : 119.0) no description available & (gnl|cdd|86457 : 106.0) no description available & (reliability: 324.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T
'27.2' 'RNA.transcription' 'niben101scf00765_197865-207205' '(gnl|cdd|86462 : 91.9) no description available & (at3g59600 : 91.3) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.; NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 86.9) no description available & (reliability: 182.6) & (original description: Putative , Description = , PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'niben101scf00765_225169-230539' '(gnl|cdd|38610 : 126.0) no description available & (gnl|cdd|86462 : 126.0) no description available & (at3g59600 : 115.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.; NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RPB, Description = Nucleic acid-binding, OB-fold, PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'niben101scf01102_322876-359877' '(at2g40030 : 1612.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 705.0) no description available & (gnl|cdd|82682 : 253.0) no description available & (reliability: 3224.0) & (original description: Putative NRPE1, Description = DNA-directed RNA polymerase V subunit 1, PFAM = PF04983;PF04997;PF11523;PF00623;PF04998)' T
'27.2' 'RNA.transcription' 'niben101scf01267_1018980-1027327' '(at5g43130 : 267.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 152.0) no description available & (gnl|cdd|37552 : 84.8) no description available & (reliability: 534.0) & (original description: Putative BnaC04g17340D, Description = BnaC04g17340D protein, PFAM = PF05236)' T
'27.2' 'RNA.transcription' 'niben101scf01304_1379778-1394275' '(at3g21350 : 282.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 124.0) no description available & (gnl|cdd|68505 : 109.0) no description available & (reliability: 564.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T
'27.2' 'RNA.transcription' 'niben101scf01437_1417-18226' '(at3g23780 : 1587.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1170.0) no description available & (gnl|cdd|82681 : 693.0) no description available & (p56299|rpob_chlvu : 130.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 3174.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF04566;PF04567;PF00562;PF04561;PF04565;PF04560;PF04563)' T
'27.2' 'RNA.transcription' 'niben101scf01509_182663-206105' '(at3g23590 : 1097.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2194.0) & (original description: Putative BnaC04g51780D, Description = BnaC04g51780D protein, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf01687_1216073-1218376' '(gnl|cdd|79225 : 127.0) no description available & (q9mtm3|rpoc2_oenho : 111.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Oenothera hookeri (Hooker's evening primrose) & (atcg00170 : 110.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 220.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf01721_1095253-1101823' '(at4g31720 : 147.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 133.0) no description available & (gnl|cdd|67175 : 83.1) no description available & (reliability: 294.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T
'27.2' 'RNA.transcription' 'niben101scf01797_177461-185634' '(at1g14790 : 1414.0) Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36206 : 878.0) no description available & (gnl|cdd|68744 : 516.0) no description available & (reliability: 2828.0) & (original description: Putative RDR1, Description = RNA-dependent RNA polymerase 1, PFAM = PF05183)' T
'27.2' 'RNA.transcription' 'niben101scf02015_574995-579276' '(p93348|tbp_tobac : 394.0) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Nicotiana tabacum (Common tobacco) & (at1g55520 : 365.0) TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex.; TATA binding protein 2 (TBP2); CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1); Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736; Bacteria - 0; Metazoa - 578; Fungi - 191; Plants - 155; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|63837 : 330.0) no description available & (gnl|cdd|38512 : 306.0) no description available & (reliability: 730.0) & (original description: Putative TBP1, Description = TATA-box-binding protein, PFAM = PF00352;PF00352)' T
'27.2' 'RNA.transcription' 'niben101scf02182_1379826-1388464' '(at4g10070 : 280.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 110.0) no description available & (reliability: 560.0) & (original description: Putative F14M2.18, Description = F14M2.18 protein, PFAM = PF00013;PF00013)' T
'27.2' 'RNA.transcription' 'niben101scf02310_485959-492045' '(at5g09920 : 209.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|37562 : 148.0) no description available & (gnl|cdd|47933 : 115.0) no description available & (reliability: 418.0) & (original description: Putative NRPB4, Description = DNA-directed RNA polymerase II subunit 4, PFAM = PF03874)' T
'27.2' 'RNA.transcription' 'niben101scf02455_176441-183176' '(at1g80480 : 562.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 457.0) no description available & (gnl|cdd|30869 : 308.0) no description available & (reliability: 1124.0) & (original description: Putative PTAC17, Description = Cobalamin synthesis protein P47K, PFAM = PF02492;PF07683)' T
'27.2' 'RNA.transcription' 'niben101scf02508_730708-743656' '(at3g21350 : 283.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 127.0) no description available & (gnl|cdd|68505 : 111.0) no description available & (reliability: 566.0) & (original description: Putative MED6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T
'27.2' 'RNA.transcription' 'niben101scf02548_657236-665593' '(at4g19210 : 1166.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35286 : 1092.0) no description available & (gnl|cdd|31438 : 886.0) no description available & (p56344|cysa_chlvu : 80.1) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 2332.0) & (original description: Putative ABCE2, Description = ABC transporter E family member 2, PFAM = PF00005;PF00005;PF04068;PF00037)' T
'27.2' 'RNA.transcription' 'niben101scf02623_112190-124916' '(q8l6j1|rpo3b_tobac : 1791.0) DNA-directed RNA polymerase 3B, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3B) (NictaRpoT3-tom) - Nicotiana tabacum (Common tobacco) & (at2g24120 : 1249.0) SCABRA 3 (SCA3); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1); Has 1200 Blast hits to 1186 proteins in 332 species: Archae - 0; Bacteria - 40; Metazoa - 130; Fungi - 220; Plants - 200; Viruses - 136; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|36256 : 1143.0) no description available & (gnl|cdd|34711 : 592.0) no description available & (reliability: 2498.0) & (original description: Putative rpmA, Description = DNA-directed RNA polymerase, PFAM = PF00940;PF14700)' T
'27.2' 'RNA.transcription' 'niben101scf02738_660146-679171' '(q8vwf8|rpot2_nicsy : 1923.0) DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 2) (NsRpoT-B) - Nicotiana sylvestris (Wood tobacco) & (at5g15700 : 1317.0) Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.; DNA/RNA polymerases superfamily protein; FUNCTIONS IN: RNA polymerase activity, DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion, chloroplast, thylakoid membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1). & (gnl|cdd|36256 : 1203.0) no description available & (gnl|cdd|34711 : 608.0) no description available & (reliability: 2634.0) & (original description: Putative RPOT2, Description = DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, PFAM = PF00940;PF14700)' T
'27.2' 'RNA.transcription' 'niben101scf02786_320359-333391' '(at1g03280 : 439.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 289.0) no description available & (gnl|cdd|47832 : 122.0) no description available & (reliability: 878.0) & (original description: Putative Os08g0343300, Description = Os08g0343300 protein, PFAM = PF02002)' T
'27.2' 'RNA.transcription' 'niben101scf02842_18671-24093' '(at3g22320 : 299.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 270.0) no description available & (gnl|cdd|67484 : 101.0) no description available & (reliability: 598.0) & (original description: Putative NRPB5A, Description = DNA-directed RNA polymerases II and IV subunit 5A, PFAM = PF01191;PF03871)' T
'27.2' 'RNA.transcription' 'niben101scf02868_485829-495328' '(at4g31720 : 186.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 138.0) no description available & (gnl|cdd|34763 : 87.5) no description available & (reliability: 372.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T
'27.2' 'RNA.transcription' 'niben101scf03031_494811-498428' '(at3g22590 : 501.0) Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).; PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38990 : 271.0) no description available & (gnl|cdd|86810 : 252.0) no description available & (reliability: 1002.0) & (original description: Putative CDC73, Description = Protein CDC73 homolog, PFAM = PF16050;PF05179)' T
'27.2' 'RNA.transcription' 'niben101scf03208_211547-226857' '(at4g13670 : 249.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T
'27.2' 'RNA.transcription' 'niben101scf03393_14849-38264' '(at3g23590 : 1500.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 3000.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf03565_53525-68738' '(at3g49000 : 373.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 218.0) no description available & (gnl|cdd|69183 : 121.0) no description available & (reliability: 746.0) & (original description: Putative glysoja_041468, Description = DNA-directed RNA polymerase III subunit RPC3, PFAM = PF08221;PF05645)' T
'27.2' 'RNA.transcription' 'niben101scf03638_60928-67862' '(at1g80480 : 421.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 379.0) no description available & (gnl|cdd|30869 : 319.0) no description available & (reliability: 842.0) & (original description: Putative F7H2.7, Description = At1g15730/F7H2_7, PFAM = PF07683;PF02492)' T
'27.2' 'RNA.transcription' 'niben101scf03693_478390-484586' '(at4g36650 : 538.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 314.0) no description available & (gnl|cdd|31595 : 146.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'niben101scf03693_669433-679852' '(at5g49530 : 377.0) SIN-like family protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68376 : 286.0) no description available & (gnl|cdd|37565 : 154.0) no description available & (reliability: 754.0) & (original description: Putative PGSC0003DMG400004762, Description = DNA-directed RNA polymerase III subunit RPC5, PFAM = PF04801)' T
'27.2' 'RNA.transcription' 'niben101scf03817_1220639-1226008' '(gnl|cdd|35482 : 232.0) no description available & (at5g60040 : 228.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|86769 : 140.0) no description available & (reliability: 456.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998)' T
'27.2' 'RNA.transcription' 'niben101scf03918_118036-121986' '(at1g54140 : 209.0) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38544 : 158.0) no description available & (gnl|cdd|66019 : 122.0) no description available & (reliability: 418.0) & (original description: Putative TAF9, Description = Transcription initiation factor TFIID subunit 9, PFAM = PF02291)' T
'27.2' 'RNA.transcription' 'niben101scf03944_207887-215936' '(at3g16980 : 197.0) One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265; NRPB9A; FUNCTIONS IN: DNA-directed RNA polymerase activity, transcription regulator activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: transcription, regulation of transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: RNA polymerases M/15 Kd subunit (TAIR:AT4G16265.1); Has 955 Blast hits to 950 proteins in 294 species: Archae - 163; Bacteria - 0; Metazoa - 246; Fungi - 231; Plants - 130; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|37902 : 152.0) no description available & (reliability: 394.0) & (original description: Putative NRPB9A, Description = DNA-directed RNA polymerases II, IV and V subunit 9A, PFAM = PF02150;PF01096)' T
'27.2' 'RNA.transcription' 'niben101scf03964_218661-222292' '(at1g06790 : 172.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 130.0) no description available & (gnl|cdd|71725 : 90.4) no description available & (reliability: 344.0) & (original description: Putative MTR_8g072680, Description = DNA-directed RNA polymerase III protein, PFAM = PF08292)' T
'27.2' 'RNA.transcription' 'niben101scf03964_219348-223530' '(at1g06790 : 243.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 211.0) no description available & (gnl|cdd|31292 : 117.0) no description available & (reliability: 486.0) & (original description: Putative RPB7B, Description = DNA-directed RNA polymerase II, 19 kDa polypeptide, PFAM = PF03876;PF08292)' T
'27.2' 'RNA.transcription' 'niben101scf04067_702870-712072' '(at5g43130 : 439.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 178.0) no description available & (reliability: 878.0) & (original description: Putative TAF4B, Description = Transcription initiation factor TFIID subunit 4b, PFAM = PF05236;PF12174)' T
'27.2' 'RNA.transcription' 'niben101scf04187_44558-62027' '(q93y94|rpot1_nicsy : 1914.0) DNA-directed RNA polymerase 1, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 1) (NsRpoT-A) - Nicotiana sylvestris (Wood tobacco) & (at1g68990 : 1253.0) MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development.; male gametophyte defective 3 (MGP3); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: pollen tube growth, transcription, ovule development, embryo development ending in seed dormancy; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT5G15700.1). & (gnl|cdd|36256 : 1229.0) no description available & (gnl|cdd|34711 : 605.0) no description available & (reliability: 2506.0) & (original description: Putative RPOT1, Description = DNA-directed RNA polymerase 1, mitochondrial, PFAM = PF00940;PF14700)' T
'27.2' 'RNA.transcription' 'niben101scf04189_39179-55627' '(at2g19930 : 714.0) RNA-dependent RNA polymerase family protein; FUNCTIONS IN: RNA-directed RNA polymerase activity; INVOLVED IN: posttranscriptional gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase family protein (TAIR:AT2G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36206 : 303.0) no description available & (gnl|cdd|68744 : 226.0) no description available & (reliability: 1428.0) & (original description: Putative RDR5, Description = Probable RNA-dependent RNA polymerase 5, PFAM = PF05183)' T
'27.2' 'RNA.transcription' 'niben101scf04404_514319-523842' '(at3g10330 : 557.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 546.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 418.0) no description available & (gnl|cdd|31595 : 223.0) no description available & (reliability: 1114.0) & (original description: Putative TFIIB1, Description = Transcription initiation factor IIB, PFAM = PF08271;PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'niben101scf04523_63857-66316' '(at4g14660 : 151.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 96.1) no description available & (reliability: 302.0) & (original description: Putative NRPE7, Description = Nucleic acid-binding, OB-fold, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf04740_243802-245524' '(at5g45140 : 383.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (gnl|cdd|35436 : 345.0) no description available & (gnl|cdd|73223 : 289.0) no description available & (p56299|rpob_chlvu : 86.7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 766.0) & (original description: Putative rpc2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04560;PF00562)' T
'27.2' 'RNA.transcription' 'niben101scf04764_588221-606688' '(at1g54250 : 182.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 164.0) no description available & (gnl|cdd|86462 : 160.0) no description available & (reliability: 364.0) & (original description: Putative NRPB8B, Description = DNA-directed RNA polymerases II, IV and V subunit 8B, PFAM = PF03870)' T
'27.2' 'RNA.transcription' 'niben101scf04795_195185-218719' '(at3g52270 : 255.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 203.0) no description available & (gnl|cdd|66000 : 93.2) no description available & (reliability: 486.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'niben101scf04899_168817-172854' '(at1g02680 : 154.0) TBP-associated factor 13 (TAF13); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding; INVOLVED IN: transcription initiation, transcription from RNA polymerase II promoter; LOCATED IN: transcription factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IID, 18kDa subunit (InterPro:IPR003195), Histone-fold (InterPro:IPR009072); Has 554 Blast hits to 554 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 284; Plants - 44; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39104 : 127.0) no description available & (gnl|cdd|65999 : 101.0) no description available & (reliability: 308.0) & (original description: Putative TAF13, Description = Transcription initiation factor TFIID subunit 13, PFAM = PF02269)' T
'27.2' 'RNA.transcription' 'niben101scf04973_105330-107563' '(at1g61700 : 113.0) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.; RNA polymerases N / 8 kDa subunit; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA polymerases, N/8kDa subunit (InterPro:IPR000268), RNA polymerases, subunit N, zinc binding site (InterPro:IPR020789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: RNA polymerases N / 8 kDa subunit (TAIR:AT1G11475.1); Has 943 Blast hits to 943 proteins in 326 species: Archae - 263; Bacteria - 0; Metazoa - 146; Fungi - 184; Plants - 71; Viruses - 3; Other Eukaryotes - 276 (source: NCBI BLink). & (q39290|rpb10_brana : 110.0) DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) - Brassica napus (Rape) & (gnl|cdd|38707 : 108.0) no description available & (gnl|cdd|31830 : 92.2) no description available & (reliability: 226.0) & (original description: Putative NRPB10, Description = DNA-directed RNA polymerases II, IV and V subunit 10, PFAM = PF01194)' T
'27.2' 'RNA.transcription' 'niben101scf04987_112742-115332' '(at4g14660 : 120.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 110.0) no description available & (reliability: 240.0) & (original description: Putative TCM_020785, Description = DNA-directed RNA polymerase II subunit RPB7, putative isoform 1, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf05278_93856-100081' '(at3g46780 : 449.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 144.0) no description available & (reliability: 898.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T
'27.2' 'RNA.transcription' 'niben101scf05351_39658-51659' '(p46279|rpb7_soybn : 335.0) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (at5g59180 : 327.0) Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7; NRPB7; FUNCTIONS IN: DNA-directed RNA polymerase activity, RNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT4G14660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38508 : 235.0) no description available & (gnl|cdd|31292 : 133.0) no description available & (reliability: 654.0) & (original description: Putative rft1, Description = DNA-directed RNA polymerase II subunit RPB7, PFAM = PF03876;PF00575)' T
'27.2' 'RNA.transcription' 'niben101scf05535_231963-250371' '(gnl|cdd|38428 : 176.0) no description available & (at3g57080 : 171.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|67484 : 92.2) no description available & (reliability: 342.0) & (original description: Putative NRPE5A, Description = DNA-directed RNA polymerase V subunit 5A, PFAM = PF01191;PF03871)' T
'27.2' 'RNA.transcription' 'niben101scf05576_32509-35306' '(at5g10070 : 311.0) RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38364 : 286.0) no description available & (gnl|cdd|32225 : 219.0) no description available & (reliability: 622.0) & (original description: Putative TSR3, Description = Ribosome biogenesis protein TSR3, PFAM = PF04068;PF04034)' T
'27.2' 'RNA.transcription' 'niben101scf05610_330202-335593' '(at4g36650 : 541.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 307.0) no description available & (gnl|cdd|31595 : 140.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'niben101scf06080_301055-329136' '(at1g29940 : 1674.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1421.0) no description available & (gnl|cdd|30434 : 608.0) no description available & (q85x54|rpob_pinko : 110.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3348.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF04563;PF00562;PF04561;PF06883;PF04560)' T
'27.2' 'RNA.transcription' 'niben101scf06156_273708-287059' '(at3g22320 : 230.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 209.0) no description available & (gnl|cdd|32195 : 96.5) no description available & (reliability: 460.0) & (original description: Putative POLR2E, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF03871;PF01191)' T
'27.2' 'RNA.transcription' 'niben101scf06162_42912-48242' '(at1g29940 : 282.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 212.0) no description available & (reliability: 564.0) & (original description: Putative RPA2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04561)' T
'27.2' 'RNA.transcription' 'niben101scf06517_81047-89250' '(at4g24440 : 179.0) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q94hl5|t2ag_orysa : 169.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (gnl|cdd|38673 : 151.0) no description available & (gnl|cdd|34724 : 107.0) no description available & (reliability: 358.0) & (original description: Putative toa2, Description = Transcription initiation factor IIA subunit 2, PFAM = PF02751;PF02268)' T
'27.2' 'RNA.transcription' 'niben101scf06686_138571-145236' '(at1g75510 : 309.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 226.0) no description available & (gnl|cdd|34693 : 116.0) no description available & (reliability: 618.0) & (original description: Putative BnaC02g24370D, Description = BnaC02g24370D protein, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'niben101scf06976_293711-296535' '(at1g80780 : 455.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G32070.1). & (gnl|cdd|35525 : 381.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 832.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.2' 'RNA.transcription' 'niben101scf07203_431529-443818' '(at3g10330 : 462.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 457.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 370.0) no description available & (gnl|cdd|31595 : 205.0) no description available & (reliability: 924.0) & (original description: Putative gtf2b, Description = Putative uncharacterized protein gtf2b, PFAM = PF08271;PF00382;PF00382)' T
'27.2' 'RNA.transcription' 'niben101scf07720_21459-32481' '(at1g61700 : 129.0) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.; RNA polymerases N / 8 kDa subunit; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA polymerases, N/8kDa subunit (InterPro:IPR000268), RNA polymerases, subunit N, zinc binding site (InterPro:IPR020789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: RNA polymerases N / 8 kDa subunit (TAIR:AT1G11475.1); Has 943 Blast hits to 943 proteins in 326 species: Archae - 263; Bacteria - 0; Metazoa - 146; Fungi - 184; Plants - 71; Viruses - 3; Other Eukaryotes - 276 (source: NCBI BLink). & (q39290|rpb10_brana : 129.0) DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) - Brassica napus (Rape) & (gnl|cdd|38707 : 123.0) no description available & (gnl|cdd|31830 : 97.6) no description available & (reliability: 258.0) & (original description: Putative NRPB10, Description = DNA-directed RNA polymerases II, IV and V subunit 10, PFAM = PF01194)' T
'27.2' 'RNA.transcription' 'niben101scf07727_115809-130139' '(at3g52090 : 192.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 158.0) no description available & (reliability: 384.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T
'27.2' 'RNA.transcription' 'niben101scf07798_145635-155146' '(at1g17440 : 186.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|86457 : 113.0) no description available & (gnl|cdd|36357 : 93.6) no description available & (reliability: 372.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T
'27.2' 'RNA.transcription' 'niben101scf08193_129920-137399' '(at4g19210 : 1162.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35286 : 1093.0) no description available & (gnl|cdd|31438 : 888.0) no description available & (reliability: 2324.0) & (original description: Putative ABCE1, Description = ABC transporter E family member 1, PFAM = PF04068;PF00005;PF00005;PF00037)' T
'27.2' 'RNA.transcription' 'niben101scf08446_160242-172202' '(at4g21710 : 2259.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (gnl|cdd|35435 : 1848.0) no description available & (gnl|cdd|82681 : 1134.0) no description available & (q9mus5|rpob_mesvi : 176.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (reliability: 4518.0) & (original description: Putative NRPB2, Description = DNA-directed RNA polymerase II subunit 2, PFAM = PF04566;PF04560;PF04567;PF04563;PF00562;PF04565;PF04561)' T
'27.2' 'RNA.transcription' 'niben101scf08533_209137-217430' '(at3g52270 : 164.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 326.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T
'27.2' 'RNA.transcription' 'niben101scf09310_335071-344308' '(p26357|tbp_soltu : 394.0) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Solanum tuberosum (Potato) & (at1g55520 : 373.0) TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex.; TATA binding protein 2 (TBP2); CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1); Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736; Bacteria - 0; Metazoa - 578; Fungi - 191; Plants - 155; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|63837 : 331.0) no description available & (gnl|cdd|38512 : 310.0) no description available & (reliability: 746.0) & (original description: Putative TBP1, Description = TATA-box-binding protein, PFAM = PF00352;PF00352)' T
'27.2' 'RNA.transcription' 'niben101scf09315_170965-173789' '(at2g32070 : 452.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 383.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 826.0) & (original description: Putative cnot8, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.2' 'RNA.transcription' 'niben101scf09459_40464-47749' '(at4g13670 : 120.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T
'27.2' 'RNA.transcription' 'niben101scf09989_204870-212255' '(at4g20280 : 179.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 133.0) no description available & (gnl|cdd|68297 : 121.0) no description available & (reliability: 358.0) & (original description: Putative TAF11B, Description = Transcription initiation factor TFIID subunit 11b, PFAM = PF04719)' T
'27.2' 'RNA.transcription' 'niben101scf10343_130420-155789' '(p46279|rpb7_soybn : 267.0) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (at5g59180 : 261.0) Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7; NRPB7; FUNCTIONS IN: DNA-directed RNA polymerase activity, RNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT4G14660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38508 : 188.0) no description available & (gnl|cdd|73169 : 120.0) no description available & (reliability: 522.0) & (original description: Putative RPB7, Description = DNA-directed RNA polymerase II subunit RPB7, PFAM = PF00575;PF03876)' T
'27.2' 'RNA.transcription' 'niben101scf10713_29069-38507' '(at4g20330 : 309.0) Transcription initiation factor TFIIE, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIIE, beta subunit (InterPro:IPR016656), Transcription factor TFIIE beta subunit, DNA-binding domain (InterPro:IPR003166); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIIE, beta subunit (TAIR:AT4G21010.1); Has 316 Blast hits to 316 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 101; Plants - 70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|38305 : 208.0) no description available & (reliability: 618.0) & (original description: Putative Sb06g028040, Description = Transcription initiation factor IIE subunit beta, PFAM = PF02186)' T
'27.2' 'RNA.transcription' 'niben101scf11037_231541-251084' '(at3g23590 : 1323.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2646.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T
'27.2' 'RNA.transcription' 'niben101scf11909_12234-15055' '(at2g32070 : 446.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 377.0) no description available & (gnl|cdd|86737 : 289.0) no description available & (reliability: 824.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T
'27.2' 'RNA.transcription' 'niben101scf12011_100557-106146' '(at5g63670 : 186.0) SPT4 homolog 2 (SPT42); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation Spt4-like (InterPro:IPR016046); BEST Arabidopsis thaliana protein match is: Transcription initiation Spt4-like protein (TAIR:AT5G08565.1). & (gnl|cdd|69606 : 148.0) no description available & (gnl|cdd|38700 : 128.0) no description available & (reliability: 372.0) & (original description: Putative At5g63670, Description = Transcription elongation factor SPT4 homolog 2, PFAM = PF06093)' T
'27.2' 'RNA.transcription' 'niben101scf12609_251090-257617' '(at3g49500 : 1583.0) Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.; RNA-dependent RNA polymerase 6 (RDR6); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 633 Blast hits to 609 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 284; Plants - 204; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36206 : 859.0) no description available & (gnl|cdd|68744 : 450.0) no description available & (reliability: 3166.0) & (original description: Putative RDR6, Description = RNA-dependent RNA polymerase 6, PFAM = PF05183)' T
'27.2' 'RNA.transcription' 'niben101scf12714_55965-64501' '(at4g11130 : 1302.0) Encodes RNA-dependent RNA polymerase that is required for endogenous siRNA (but not miRNA) formation. Nomenclature according to Xie, et al. (2004).; RNA-dependent RNA polymerase 2 (RDR2); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36206 : 813.0) no description available & (gnl|cdd|68744 : 437.0) no description available & (reliability: 2604.0) & (original description: Putative RDR2, Description = RNA-dependent RNA polymerase 2, PFAM = PF05183)' T
'27.2' 'RNA.transcription' 'niben101scf14012_72495-75745' '(p38550|rpoc2_tobac : 865.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79225 : 827.0) no description available & (atcg00170 : 661.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 1322.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04998)' T
'27.2' 'RNA.transcription' 'niben101scf14273_98502-108394' '(at4g35800 : 2746.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (gnl|cdd|35481 : 2326.0) no description available & (gnl|cdd|82682 : 949.0) no description available & (q9tl05|rpoc1_nepol : 143.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 5492.0) & (original description: Putative NRPB1, Description = DNA-directed RNA polymerase II subunit 1, PFAM = PF04990;PF04983;PF04992;PF04998;PF04997;PF00623;PF05000;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001)' T
'27.2' 'RNA.transcription' 'niben101scf17422_92021-101450' '(at2g15430 : 503.0) Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.; NRPB3; FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1); Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243; Bacteria - 1; Metazoa - 278; Fungi - 347; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36735 : 358.0) no description available & (gnl|cdd|47937 : 200.0) no description available & (reliability: 1006.0) & (original description: Putative NRPB3, Description = DNA-directed RNA polymerases II, IV and V subunit 3, PFAM = PF01000;PF01193)' T
'27.2' 'RNA.transcription' 'niben101scf17688_104447-123805' '(at1g63020 : 1297.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 683.0) no description available & (gnl|cdd|82682 : 240.0) no description available & (reliability: 2594.0) & (original description: Putative NRPD1, Description = DNA-directed RNA polymerase IV subunit 1, PFAM = PF04997;PF00623;PF11523;PF04983;PF05000)' T
'27.2' 'RNA.transcription' 'niben101scf19480_1-3024' '(at2g47990 : 598.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (gnl|cdd|35531 : 514.0) no description available & (gnl|cdd|29257 : 150.0) no description available & (reliability: 1196.0) & (original description: Putative SWA1, Description = Protein SLOW WALKER 1, PFAM = PF09384;PF00400;PF00400;PF00400)' T
'27.2' 'RNA.transcription' 'niben101scf23770_41839-55313' '(at3g57080 : 189.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38428 : 165.0) no description available & (gnl|cdd|67484 : 93.0) no description available & (reliability: 378.0) & (original description: Putative RPB5B, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T
'27.2' 'RNA.transcription' 'niben101scf31053_2273-11087' '(gnl|cdd|35483 : 190.0) no description available & (at3g57660 : 170.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|82682 : 101.0) no description available & (reliability: 340.0) & (original description: Putative RPA1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T
'27.2.1' 'RNA.transcription.RNA Polymerases' '' ''
'27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold11539_35768-44566' '(at1g21600 : 392.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative PTAC6, Description = AT1G21600 protein, PFAM = )' T
'27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold23225_3371-8042' '(at5g17560 : 129.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold46378_6392-10449' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 444.0) no description available & (gnl|cdd|85281 : 342.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold56006_1043-11556' '(at5g62090 : 381.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative SLK3, Description = Probable transcriptional regulator SLK3, PFAM = PF01803)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold56223_3821-11918' '(at1g79730 : 410.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 149.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 820.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold138_841798-849153' '(at1g79730 : 458.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 150.0) no description available & (gnl|cdd|67594 : 117.0) no description available & (reliability: 916.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold4093_74794-79570' '(at5g17560 : 129.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold5891_38603-56538' '(at3g04740 : 1592.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 391.0) no description available & (reliability: 3184.0) & (original description: Putative Sb07g013340, Description = Putative uncharacterized protein Sb07g013340, PFAM = PF08638)' T
'27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold7482_41288-44807' '(at1g55300 : 169.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68237 : 106.0) no description available & (gnl|cdd|39214 : 100.0) no description available & (reliability: 338.0) & (original description: Putative Sb03g029540, Description = Putative uncharacterized protein Sb03g029540, PFAM = PF04658)' T
'27.3' 'RNA.regulation of transcription' 'niben044scf00001163ctg013_1601-12342' '(at5g62090 : 396.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative SLK3, Description = Probable transcriptional regulator SLK3, PFAM = PF01803)' T
'27.3' 'RNA.regulation of transcription' 'niben044scf00005810ctg002_10053-19124' '(at1g74850 : 901.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 191.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1802.0) & (original description: Putative PTAC2, Description = Pentatricopeptide repeat-containing protein At1g74850, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13812)' T
'27.3' 'RNA.regulation of transcription' 'niben044scf00044566ctg008_1-3076' '(at3g04740 : 524.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 289.0) no description available & (gnl|cdd|87582 : 127.0) no description available & (reliability: 1048.0) & (original description: Putative Os08g0332800, Description = Os08g0332800 protein, PFAM = PF08638)' T
'27.3' 'RNA.regulation of transcription' 'niben044scf00044566ctg010_214-10258' '(at3g04740 : 367.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 107.0) no description available & (reliability: 734.0) & (original description: Putative SWP, Description = Mediator of RNA polymerase II transcription subunit 14, PFAM = )' T
'27.3' 'RNA.regulation of transcription' 'niben044scf00060633ctg001_358-7710' '(at1g79730 : 479.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 148.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 958.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf00548_8916-27604' '(at1g74850 : 1254.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 211.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2508.0) & (original description: Putative PTAC2, Description = Pentatricopeptide repeat-containing protein At1g74850, chloroplastic, PFAM = PF13041;PF13041;PF01535;PF13812;PF13812;PF17177;PF12854)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf00646_657889-662664' '(at1g76900 : 583.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 450.0) no description available & (gnl|cdd|85281 : 348.0) no description available & (reliability: 1164.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf00812_171373-184567' '(at5g62090 : 409.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf01281_847265-850232' '(at1g13870 : 416.0) Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots.; DEFORMED ROOTS AND LEAVES 1 (DRL1); CONTAINS InterPro DOMAIN/s: Chromatin associated protein KTI12 (InterPro:IPR013641); Has 345 Blast hits to 340 proteins in 174 species: Archae - 7; Bacteria - 2; Metazoa - 117; Fungi - 134; Plants - 50; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38272 : 318.0) no description available & (gnl|cdd|71862 : 274.0) no description available & (reliability: 832.0) & (original description: Putative Sb02g001010, Description = Putative uncharacterized protein Sb02g001010, PFAM = PF08433)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf01696_517291-534777' '(at3g04740 : 1605.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 394.0) no description available & (reliability: 3210.0) & (original description: Putative Sb07g013340, Description = Putative uncharacterized protein Sb07g013340, PFAM = PF08638)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf02164_542781-548870' '(at1g55300 : 219.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68237 : 144.0) no description available & (gnl|cdd|39214 : 123.0) no description available & (reliability: 438.0) & (original description: Putative BnaAnng35590D, Description = BnaAnng35590D protein, PFAM = PF04658)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf02452_514819-521383' '(at1g21600 : 395.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative PTAC6, Description = AT1G21600 protein, PFAM = )' T
'27.3' 'RNA.regulation of transcription' 'niben101scf05310_35920-39960' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 445.0) no description available & (gnl|cdd|85281 : 343.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf06087_411014-418075' '(at5g09830 : 107.0) BolA-like family protein; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: chloroplast sulfur E (TAIR:AT4G26500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38558 : 98.9) no description available & (gnl|cdd|30620 : 80.0) no description available & (reliability: 214.0) & (original description: Putative BOLA2, Description = Protein BOLA2, PFAM = PF01722)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf07272_187839-193147' '(at1g76900 : 578.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 434.0) no description available & (gnl|cdd|85281 : 335.0) no description available & (reliability: 1106.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf10650_85053-92537' '(at1g79730 : 446.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 146.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 892.0) & (original description: Putative ELF7, Description = RNA polymerase II-associated, Paf1, PFAM = PF03985)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf12983_149135-153720' '(at5g17560 : 130.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf21965_15600-22792' '(at2g33540 : 821.0) C-terminal domain phosphatase-like 3 (CPL3); FUNCTIONS IN: phosphoprotein phosphatase activity, CTD phosphatase activity; INVOLVED IN: response to salt stress; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 4 (TAIR:AT5G58003.1); Has 1686 Blast hits to 1267 proteins in 263 species: Archae - 0; Bacteria - 131; Metazoa - 483; Fungi - 269; Plants - 334; Viruses - 2; Other Eukaryotes - 467 (source: NCBI BLink). & (gnl|cdd|47876 : 152.0) no description available & (gnl|cdd|35544 : 134.0) no description available & (reliability: 1642.0) & (original description: Putative CPL3, Description = RNA polymerase II C-terminal domain phosphatase-like 4, PFAM = PF03031;PF00533)' T
'27.3' 'RNA.regulation of transcription' 'niben101scf32851_15957-26118' '(at2g34640 : 546.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 12 (PTAC12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 330 Blast hits to 283 proteins in 92 species: Archae - 0; Bacteria - 6; Metazoa - 99; Fungi - 32; Plants - 40; Viruses - 9; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative PTAC12, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, PFAM = )' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.3scaffold39620_1-4455' '(at4g32010 : 132.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.3scaffold43859_4590-7777' '(at2g46870 : 219.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 438.0) & (original description: Putative Os03g0120900, Description = B3 domain-containing protein Os03g0120900, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.5scaffold1757_39033-44938' '(at5g06250 : 179.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 358.0) & (original description: Putative ABI2, Description = B3 DNA-binding domain protein, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.5scaffold2490_130193-148841' '(at4g32010 : 490.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (p26307|viv1_maize : 80.1) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 980.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00004133ctg003_875-4440' '(at5g06250 : 184.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 368.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00004410ctg013_1492-9731' '(at4g32010 : 331.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00008902ctg002_849-5461' '(at4g32010 : 130.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00008902ctg004_1-4655' '(at4g32010 : 286.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 84.3) no description available & (reliability: 572.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00035571ctg007_11517-15729' '(at2g30470 : 131.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = )' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf01938_174547-180303' '(at2g36080 : 195.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 390.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf02482_304565-313674' '(at4g32010 : 333.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf02547_243308-249821' '(at2g36080 : 193.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 103.0) no description available & (reliability: 386.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03256_140710-163536' '(at2g30470 : 658.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 87.0) no description available & (p37398|viv_orysa : 83.6) Protein viviparous homolog - Oryza sativa (Rice) & (reliability: 1290.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF02362;PF07496)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03274_67918-71213' '(at1g01030 : 212.0) NGATHA3 (NGA3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G01500.1); Has 1380 Blast hits to 1379 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 95.5) no description available & (reliability: 424.0) & (original description: Putative BnaC04g51560D, Description = BnaC04g51560D protein, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03371_62045-69489' '(at3g26790 : 172.0) Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.; FUSCA 3 (FUS3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G24650.1); Has 875 Blast hits to 861 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 7; Plants - 523; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (p26307|viv1_maize : 110.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 344.0) & (original description: Putative FUS3, Description = B3 domain-containing transcription factor FUS3, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf06222_218736-236790' '(at2g30470 : 436.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (reliability: 822.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07036_402003-405202' '(at2g46870 : 215.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 96.3) no description available & (reliability: 430.0) & (original description: Putative NGA1, Description = B3 domain-containing transcription factor NGA1, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07069_15362-39912' '(at4g32010 : 489.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 85.1) no description available & (p26307|viv1_maize : 80.1) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 978.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07554_84746-88041' '(at2g46870 : 211.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 95.9) no description available & (reliability: 422.0) & (original description: Putative NGA1, Description = B3 domain-containing transcription factor NGA1, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07850_243783-250169' '(at2g36080 : 185.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 370.0) & (original description: Putative ARF32, Description = B3 domain-containing protein At3g11580, PFAM = PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07951_321495-330147' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1304.0) & (original description: Putative VAL1, Description = B3 domain-containing transcription repressor VAL1, PFAM = PF07496;PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07951_322083-335047' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1304.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF07496;PF02362)' T
'27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf08157_49208-55566' '(at4g21550 : 117.0) VP1/ABI3-like 3 (VAL3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 886 Blast hits to 853 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 879; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative HSL2, Description = B3 domain-containing protein, PFAM = )' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold11753_38761-42214' '(at5g05610 : 169.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 115.0) no description available & (reliability: 338.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold17691_626-8725' '(at5g05610 : 328.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 178.0) no description available & (reliability: 656.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold30198_17111-23625' '(at2g02470 : 333.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 194.0) no description available & (reliability: 666.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.5scaffold338_296604-304703' '(at5g05610 : 308.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 179.0) no description available & (reliability: 616.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.5scaffold651_643069-650338' '(at5g20510 : 314.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 196.0) no description available & (reliability: 628.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben044scf00015002ctg008_4929-14858' '(at2g02470 : 339.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 189.0) no description available & (reliability: 678.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben044scf00047002ctg000_4589-11290' '(at5g05610 : 247.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 162.0) no description available & (reliability: 494.0) & (original description: Putative AL2, Description = Alfin-like 2 protein, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00705_26912-34001' '(at2g02470 : 329.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 191.0) no description available & (reliability: 658.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00736_42193-47683' '(at5g20510 : 320.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 199.0) no description available & (reliability: 640.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00870_1518355-1527900' '(at5g20510 : 308.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 195.0) no description available & (reliability: 616.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00870_1518358-1527736' '(at5g20510 : 306.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 193.0) no description available & (reliability: 612.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02034_414603-436936' '(at5g05610 : 296.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 172.0) no description available & (reliability: 592.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02269_41614-49132' '(at5g05610 : 309.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 174.0) no description available & (reliability: 618.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02425_59599-64630' '(at5g20510 : 222.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 147.0) no description available & (reliability: 444.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf03584_412320-433134' '(at5g26210 : 292.0) AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 4 (AL4); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36845 : 197.0) no description available & (reliability: 584.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf04018_688111-707900' '(at5g20510 : 283.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 181.0) no description available & (reliability: 566.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf04722_194140-210255' '(at5g05610 : 319.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 180.0) no description available & (reliability: 638.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf05307_425803-431140' '(at5g05610 : 166.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 116.0) no description available & (reliability: 332.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf08390_58275-67637' '(at1g14510 : 350.0) AL7 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 7 (AL7); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 6 (TAIR:AT2G02470.1); Has 1825 Blast hits to 1776 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 841; Fungi - 323; Plants - 580; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|36845 : 198.0) no description available & (reliability: 700.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF00628;PF12165)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf13950_76160-83833' '(at5g20510 : 286.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 173.0) no description available & (reliability: 572.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T
'27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf15723_1011-38826' '(at5g26210 : 288.0) AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 4 (AL4); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36845 : 195.0) no description available & (reliability: 576.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold1338_83052-87097' '(at1g78080 : 180.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (reliability: 360.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold4589_31715-36824' '(at2g28550 : 255.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.3) no description available & (reliability: 510.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold4646_52756-55805' '(at1g78080 : 156.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 119.0) no description available & (reliability: 312.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold5540_31960-38191' '(at5g57390 : 350.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 317.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 654.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold6248_1-6388' '(at1g16060 : 305.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 234.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.0) no description available & (reliability: 610.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8106_33270-36680' '(gnl|cdd|47695 : 96.1) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8265_35324-39021' '(gnl|cdd|47695 : 116.0) no description available & (at5g64750 : 97.4) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative ap2, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8443_17888-22228' '(at5g61890 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 224.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8645_8729-11523' '(at5g19790 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 226.0) & (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold10297_17723-23895' '(at5g57390 : 361.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 666.0) & (original description: Putative Os04g0653600, Description = Os04g0653600 protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold14682_1-2701' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold15734_43402-46292' '(at5g11590 : 148.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 296.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold16114_29221-33646' '(gnl|cdd|47695 : 107.0) no description available & (at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold16766_3772-6428' '(at4g25480 : 207.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 91.1) no description available & (reliability: 414.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold18406_17230-20979' '(at1g16060 : 164.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 134.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (reliability: 328.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold24293_25584-29320' '(at5g13910 : 118.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 236.0) & (original description: Putative erf, Description = Ethylene responsive transcription factor (ERF) like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold27697_18782-21939' '(at1g68840 : 387.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 774.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF00847;PF02362)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold37442_11218-17448' '(at4g13040 : 140.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); Has 254 Blast hits to 244 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os02g0499000, Description = Os02g0499000 protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold46215_461-3422' '(at5g52020 : 96.7) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (reliability: 193.4) & (original description: Putative ERF027, Description = Ethylene-responsive transcription factor ERF027, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold46873_5558-8355' '(at2g44940 : 157.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G60490.1); Has 6573 Blast hits to 6019 proteins in 323 species: Archae - 0; Bacteria - 81; Metazoa - 170; Fungi - 124; Plants - 5956; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 314.0) & (original description: Putative ERF038, Description = Ethylene-responsive transcription factor ERF038, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold50106_11396-14343' '(at5g19790 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (reliability: 214.0) & (original description: Putative ERN, Description = ERF transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold62478_3740-6462' '(at1g19210 : 141.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 282.0) & (original description: Putative CEJ1, Description = Ethylene-responsive transcription factor ERF018, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold63107_1-2934' '(at1g68840 : 364.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 94.3) no description available & (reliability: 728.0) & (original description: Putative RAV2, Description = AP2/ERF and B3 domain-containing transcription repressor RAV2, PFAM = PF02362;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold86572_1095-4234' '(at4g27950 : 170.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q9lw50|erf2_nicsy : 89.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 340.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold88331_37-3610' '(gnl|cdd|47695 : 111.0) no description available & (at5g50080 : 83.6) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold100345_370-3846' '(gnl|cdd|47695 : 94.5) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold546_199674-205047' '(at3g16770 : 147.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 101.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold876_563594-566484' '(at5g11590 : 152.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 304.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold879_563773-566444' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 100.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 184.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1166_25018-27545' '(at3g50260 : 134.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 97.6) no description available & (reliability: 258.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1630_257324-260800' '(at5g13910 : 99.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 198.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1916_193891-197627' '(at5g13910 : 119.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.2) no description available & (q9lw49|erf4_nicsy : 81.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 238.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1916_215466-218876' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 92.8) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold2300_278827-281543' '(at1g21910 : 112.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|47695 : 99.2) no description available & (reliability: 224.0) & (original description: Putative ERF012, Description = Ethylene-responsive transcription factor ERF012, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3024_239228-242511' '(gnl|cdd|47695 : 101.0) no description available & (at5g19790 : 88.6) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative WIN1L, Description = WIN1-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3639_118299-126159' '(at1g16060 : 270.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 211.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.8) no description available & (reliability: 540.0) & (original description: Putative RcWRI2, Description = AP2-type transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3768_185878-189017' '(at2g20880 : 166.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 84.7) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 332.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3962_30148-70663' '(at1g22190 : 150.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5992 Blast hits to 5760 proteins in 260 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5935; Viruses - 12; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|47695 : 120.0) no description available & (reliability: 300.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold4683_97170-104422' '(at5g10510 : 422.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 315.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 844.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold5855_13914-16875' '(at5g52020 : 104.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 97.2) no description available & (reliability: 208.0) & (original description: Putative ERF027, Description = Ethylene-responsive transcription factor ERF027, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold6973_24184-30742' '(at1g79700 : 281.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 238.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00003259ctg023_692-6019' '(at2g28550 : 330.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 140.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.9) no description available & (reliability: 660.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00004141ctg001_4645-7490' '(at3g50260 : 135.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00004774ctg002_219-10247' '(at1g51190 : 350.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 290.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.2) no description available & (reliability: 672.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00005599ctg021_9898-14490' '(at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 206.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00006275ctg011_3041-9198' '(at2g28550 : 302.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 122.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 604.0) & (original description: Putative TOE2, Description = AP2-like ethylene-responsive transcription factor TOE2, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00006372ctg012_1-5762' '(q8lsn2|bbm2_brana : 377.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 366.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 732.0) & (original description: Putative BBM1, Description = AP2-like ethylene-responsive transcription factor BBM1, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007057ctg004_11355-13945' '(at2g36450 : 114.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 92.2) no description available & (reliability: 228.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007307ctg012_16967-20001' '(at5g61890 : 119.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 83.2) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007363ctg002_23988-26731' '(q6k7e6|erf1_orysa : 143.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (at1g53910 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (reliability: 226.0) & (original description: Putative erebp, Description = Transcription factor EREBP-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00010738ctg003_23716-25555' '(gnl|cdd|47695 : 102.0) no description available & (at5g13330 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; related to AP2 6l (Rap2.6L); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor ERF114 family, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00011165ctg020_3933-6546' '(at1g71450 : 136.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 272.0) & (original description: Putative ERF021, Description = Ethylene-responsive transcription factor ERF021, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00012878ctg023_350-3561' '(at2g20880 : 165.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 84.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative dreb5, Description = Drought responsive element binding protein 5, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00013906ctg011_3443-9030' '(at2g41710 : 358.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G54320.1). & (q8l3u3|bbm1_brana : 137.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 716.0) & (original description: Putative At2g41710, Description = AP2-like ethylene-responsive transcription factor At2g41710, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00016864ctg004_1-1657' '(at5g18560 : 163.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (q9lw49|erf4_nicsy : 85.9) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 326.0) & (original description: Putative ERF086, Description = Ethylene-responsive transcription factor ERF086, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00018136ctg003_5754-9874' '(at1g78080 : 179.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (reliability: 358.0) & (original description: Putative ERF8, Description = ERF transcription factor 8, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00018810ctg010_1191-5379' '(at2g28550 : 286.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 572.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00020875ctg009_26232-29528' '(gnl|cdd|47695 : 93.8) no description available & (at5g13910 : 89.7) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00023762ctg013_257-6304' '(at1g16060 : 290.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 214.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.5) no description available & (reliability: 580.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00023762ctg013_722-6241' '(at1g16060 : 268.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 222.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (reliability: 536.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00026409ctg002_1-3090' '(at1g79700 : 93.6) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative ADAP, Description = Ethylene-responsive transcription factor WRI1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00027758ctg005_2600-5330' '(at4g27950 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q40477|erf4_tobac : 86.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 214.0) & (original description: Putative CRF1, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00028930ctg006_5175-8323' '(at2g20880 : 176.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 352.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00032853ctg020_1-2932' '(at1g64380 : 189.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 378.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00037233ctg013_10088-14086' '(at3g54320 : 274.0) WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.; WRINKLED 1 (WRI1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 248.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 498.0) & (original description: Putative WRI1, Description = WRI1, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00038737ctg003_842-3339' '(gnl|cdd|47695 : 97.6) no description available & (at4g23750 : 86.7) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00044056ctg003_1-2489' '(at5g18560 : 163.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 87.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 326.0) & (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00046725ctg003_992-3965' '(at4g39780 : 150.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G22200.1); Has 5858 Blast hits to 5712 proteins in 253 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5812; Viruses - 11; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 119.0) no description available & (reliability: 300.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00046906ctg008_1816-4451' '(at5g11590 : 172.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00047330ctg008_17023-22823' '(at3g16770 : 154.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 111.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 110.0) no description available & (reliability: 308.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00050167ctg002_29753-36025' '(at5g57390 : 363.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 666.0) & (original description: Putative AIL5, Description = AP2-like ethylene-responsive transcription factor AIL5, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00061597ctg001_1-2600' '(at1g16060 : 191.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 137.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 382.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101ctg16385_1478-4104' '(at4g25480 : 189.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 88.0) no description available & (reliability: 378.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00113_284591-290453' '(at4g13040 : 140.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); Has 254 Blast hits to 244 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os02g0499000, Description = Os02g0499000 protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00177_261076-263651' '(at5g18450 : 138.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, seed; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G75490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 97.2) no description available & (q6k7e6|erf1_orysa : 85.1) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 276.0) & (original description: Putative DRF1, Description = AP2 transcriptional activator variant, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00262_472799-475551' '(at5g53290 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 3 (CRF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (q40477|erf4_tobac : 92.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 220.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00282_242990-245655' '(at4g25490 : 208.0) Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; C-repeat/DRE binding factor 1 (CBF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 92.6) no description available & (reliability: 416.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00298_6492-9160' '(at1g19210 : 173.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (reliability: 346.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00482_797604-802904' '(at2g28550 : 297.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 115.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 594.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00496_254230-259383' '(at2g28550 : 295.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 141.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.7) no description available & (reliability: 590.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00503_748494-751387' '(at4g27950 : 124.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q40477|erf4_tobac : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 248.0) & (original description: Putative CRF1, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00530_151506-154645' '(at4g27950 : 173.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q9lw50|erf2_nicsy : 89.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 346.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00546_8541-17787' '(at1g16060 : 322.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 228.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.9) no description available & (reliability: 644.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00577_1125940-1129243' '(at1g68550 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 204.0) & (original description: Putative LjERF18, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00603_197022-202826' '(at1g01250 : 142.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 5404 Blast hits to 5361 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5399; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 284.0) & (original description: Putative AP2D33, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00735_278663-281260' '(at3g57600 : 209.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5751 Blast hits to 5635 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5730; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 418.0) & (original description: Putative DREB2F, Description = Dehydration-responsive element-binding protein 2F, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00753_126343-129329' '(at1g68550 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 87.6) no description available & (reliability: 206.0) & (original description: Putative LjERF18, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00784_156938-159504' '(at2g36450 : 143.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 286.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00839_7641-12066' '(gnl|cdd|47695 : 106.0) no description available & (at1g28370 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 101.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 208.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00870_510295-514483' '(q6k7e6|erf1_orysa : 184.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (at1g53910 : 182.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 364.0) & (original description: Putative erf1, Description = Ethylene transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01001_641033-647896' '(gnl|cdd|47695 : 100.0) no description available & (at4g11140 : 80.1) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).; cytokinin response factor 1 (CRF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 2 (TAIR:AT4G23750.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01035_418042-423242' '(at2g28550 : 254.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.9) no description available & (reliability: 508.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01085_355513-358265' '(at4g27950 : 120.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 92.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 240.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01295_571803-574927' '(at5g18560 : 162.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 87.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 324.0) & (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01297_120720-124162' '(at2g40350 : 123.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G40340.1); Has 4959 Blast hits to 4957 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4951; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (reliability: 246.0) & (original description: Putative ap2, Description = AP2 domain containing protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01374_578308-581045' '(at5g11590 : 133.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 266.0) & (original description: Putative CBF7, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01430_24824-27671' '(at2g47520 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 (HRE2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding protein (TAIR:AT3G16770.1); Has 6285 Blast hits to 5826 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6266; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 110.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 95.3) no description available & (reliability: 250.0) & (original description: Putative ERF2, Description = Ethylene responsive factor 2, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01438_425216-431447' '(at5g57390 : 348.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 317.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 654.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01453_1176434-1180264' '(gnl|cdd|47695 : 111.0) no description available & (at5g50080 : 82.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01518_838272-841300' '(at1g68550 : 97.1) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28902 : 89.2) no description available & (reliability: 194.2) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01539_1-1998' '(at5g11590 : 168.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (reliability: 336.0) & (original description: Putative TINY, Description = Dehydration-responsive element binding protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01611_1170855-1173496' '(at5g11590 : 172.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01701_314206-316940' '(at1g75490 : 128.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 256.0) & (original description: Putative DREB2D, Description = Dehydration-responsive element-binding protein 2D, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01817_88639-91709' '(at4g23750 : 155.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q9lw49|erf4_nicsy : 91.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 310.0) & (original description: Putative CRF2, Description = Ethylene-responsive transcription factor CRF2, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01818_782696-786107' '(at1g28160 : 109.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 210.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01818_801154-804630' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02219_200002-203099' '(at1g78080 : 177.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 354.0) & (original description: Putative ERF056, Description = Ethylene-responsive transcription factor ERF056, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02242_11863-363060' '(gnl|cdd|47695 : 117.0) no description available & (at5g64750 : 85.5) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02316_278334-281086' '(at4g27950 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q40477|erf4_tobac : 85.1) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 212.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02369_412347-417544' '(at2g28550 : 312.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.8) no description available & (reliability: 624.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02437_821419-824087' '(at1g19210 : 154.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 308.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02475_797901-800848' '(at5g19790 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 214.0) & (original description: Putative ERN, Description = ERF transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02540_45858-52030' '(at5g57390 : 365.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 331.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.5) no description available & (reliability: 672.0) & (original description: Putative AIL5, Description = AIL5, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02726_348064-353460' '(at4g27950 : 177.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (q40477|erf4_tobac : 91.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 354.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02972_61205-120266' '(at1g64380 : 189.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 378.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03092_54741-57469' '(at1g12610 : 119.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 88.4) no description available & (reliability: 238.0) & (original description: Putative avrl, Description = C-repeat binding factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03150_587452-590609' '(at1g68840 : 379.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 98.6) no description available & (reliability: 758.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF00847;PF02362)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03223_25314-27730' '(at1g46768 : 124.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.; related to AP2 1 (RAP2.1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5681 Blast hits to 5559 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5675; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 248.0) & (original description: Putative CEJ1, Description = Dehydration responsive element binding protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_424006-426704' '(at4g25480 : 201.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 94.6) no description available & (reliability: 402.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_483547-491556' '(at4g25480 : 207.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 88.0) no description available & (reliability: 414.0) & (original description: Putative cbf, Description = CRT/DRE binding factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_662475-665035' '(at5g52020 : 119.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 86.1) no description available & (reliability: 238.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03314_67689-70153' '(at5g67190 : 153.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 306.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03321_140778-143476' '(at1g12610 : 107.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 81.8) no description available & (reliability: 214.0) & (original description: Putative avrl, Description = C-repeat binding factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03437_351840-358219' '(at1g79700 : 279.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 209.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.4) no description available & (reliability: 558.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03488_616901-620845' '(at1g51120 : 266.0) AP2/B3 transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G50680.1); Has 3916 Blast hits to 3909 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3901; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|85971 : 90.1) no description available & (reliability: 532.0) & (original description: Putative BnaA05g15710D, Description = BnaA05g15710D protein, PFAM = PF00847;PF02362)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03510_674296-677429' '(at1g78080 : 156.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 118.0) no description available & (reliability: 312.0) & (original description: Putative ERF060, Description = Ethylene-responsive transcription factor ERF060, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03548_212754-216543' '(at5g61890 : 117.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03580_125732-128325' '(at2g36450 : 135.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 270.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03772_25470-28222' '(at5g11590 : 117.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 234.0) & (original description: Putative BnaC09g28540D, Description = BnaC02g03940D protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03773_51948-54838' '(at3g61630 : 128.0) CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.; cytokinin response factor 6 (CRF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 5 (TAIR:AT2G46310.1); Has 5693 Blast hits to 5625 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5682; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q40477|erf4_tobac : 97.1) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 256.0) & (original description: Putative BnaA09g39350D, Description = BnaA09g39350D protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03883_524637-530184' '(at2g28550 : 305.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 148.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 610.0) & (original description: Putative InAP2B, Description = APETALA2B, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03985_100977-104053' '(at4g23750 : 154.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q40477|erf4_tobac : 91.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 308.0) & (original description: Putative CRF2, Description = Ethylene-responsive transcription factor CRF2, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04217_702325-704927' '(at5g52020 : 124.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 93.0) no description available & (reliability: 248.0) & (original description: Putative ERF14, Description = Ethylene response factor 14, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04218_58211-65245' '(at1g79700 : 286.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 236.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.4) no description available & (reliability: 572.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04218_58262-65164' '(at1g79700 : 284.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 235.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 568.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04337_200231-203121' '(at5g11590 : 135.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 270.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04386_1-4790' '(at1g51190 : 558.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 353.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 1088.0) & (original description: Putative PLT2, Description = AP2-like ethylene-responsive transcription factor PLT2, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04574_725663-733050' '(at5g10510 : 419.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 314.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 838.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04826_193905-196435' '(at3g50260 : 139.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 272.0) & (original description: Putative DREB5A, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05109_383416-392804' '(at1g16060 : 281.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 211.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.9) no description available & (reliability: 562.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05123_48817-54628' '(at1g72570 : 369.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 5 (TAIR:AT5G57390.1); Has 7692 Blast hits to 5276 proteins in 259 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7602; Viruses - 4; Other Eukaryotes - 74 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 323.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 738.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor AIL1, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05135_628878-631393' '(at2g23340 : 139.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 3 (DEAR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 278.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05357_4433-7410' '(at2g40220 : 113.0) Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.; ABA INSENSITIVE 4 (ABI4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G57600.1); Has 5833 Blast hits to 5755 proteins in 285 species: Archae - 0; Bacteria - 4; Metazoa - 56; Fungi - 8; Plants - 5653; Viruses - 6; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 226.0) & (original description: Putative ABI4, Description = Ethylene-responsive transcription factor ABI4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05459_114950-117687' '(at1g12610 : 144.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 97.3) no description available & (reliability: 288.0) & (original description: Putative CBFd, Description = CBF-like transcription factor d, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05773_11140-36359' '(at1g74930 : 141.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; ORA47; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 5510 Blast hits to 5399 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5503; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 282.0) & (original description: Putative RAP2L13, Description = RAP2-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05993_133979-136839' '(at3g57600 : 207.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5751 Blast hits to 5635 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5730; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 414.0) & (original description: Putative DREB2F, Description = Dehydration-responsive element-binding protein 2F, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06026_13893-17176' '(gnl|cdd|47695 : 101.0) no description available & (at5g19790 : 89.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative WIN1L, Description = WIN1-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06059_87580-90764' '(at1g25560 : 365.0) Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.; TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|85971 : 95.5) no description available & (reliability: 730.0) & (original description: Putative RAV, Description = RAV-like DNA-binding protein, PFAM = PF00847;PF02362)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06081_271566-274270' '(at4g25470 : 135.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway.; C-repeat/DRE binding factor 2 (CBF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 1 (TAIR:AT4G25490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative DREB1F, Description = Dehydration-responsive element-binding protein 1F, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06117_100506-103717' '(at2g20880 : 172.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 85.1) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06157_170245-173000' '(at5g11590 : 115.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 105.0) no description available & (reliability: 230.0) & (original description: Putative TINYL7, Description = TINY-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06200_124514-127182' '(q40477|erf4_tobac : 108.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (at5g44210 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06407_194024-202313' '(q8lsn2|bbm2_brana : 393.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 377.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 754.0) & (original description: Putative BBM, Description = AP2-like ethylene-responsive transcription factor BBM, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06444_212633-215100' '(at5g67190 : 150.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 300.0) & (original description: Putative CEJ1, Description = RAP2-like protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06621_380526-385028' '(at5g61890 : 122.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q6k7e6|erf1_orysa : 80.9) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06621_380553-385025' '(at5g61890 : 122.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 112.0) no description available & (q6k7e6|erf1_orysa : 82.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06848_839547-842128' '(at1g71450 : 141.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 282.0) & (original description: Putative DREB4B, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06848_952348-954887' '(at1g71450 : 136.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 272.0) & (original description: Putative ERF021, Description = Ethylene-responsive transcription factor ERF021, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06913_13599-18972' '(at3g16770 : 148.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 100.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06969_5510-8232' '(at5g11590 : 160.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 320.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06984_298143-302093' '(gnl|cdd|47695 : 110.0) no description available & (at2g40220 : 103.0) Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.; ABA INSENSITIVE 4 (ABI4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G57600.1); Has 5833 Blast hits to 5755 proteins in 285 species: Archae - 0; Bacteria - 4; Metazoa - 56; Fungi - 8; Plants - 5653; Viruses - 6; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative abi4, Description = Ethylene-responsive transcription factor ABI4, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07226_825225-827872' '(at1g75490 : 149.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 96.9) no description available & (q6k7e6|erf1_orysa : 81.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative DREB2D, Description = Dehydration-responsive element-binding protein 2D, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07579_180895-183929' '(at5g61890 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 250.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07913_128929-133637' '(at5g25390 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 352.0) & (original description: Putative AP2D35, Description = AP2 domain class transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08033_130051-132797' '(at1g75490 : 125.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 94.2) no description available & (reliability: 250.0) & (original description: Putative DREB5, Description = Putative DRE-binding protein 5, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08060_129228-132899' '(at5g05410 : 123.0) Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stressñinducible genes.; DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 5407 Blast hits to 5383 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5390; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 246.0) & (original description: Putative DREB2C, Description = Dehydration-responsive element-binding protein 2C, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08516_140098-158047' '(gnl|cdd|47695 : 102.0) no description available & (at1g80580 : 91.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18560.1); Has 5731 Blast hits to 5495 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5710; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative NtERF#231, Description = Ethylene response factor #231, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08651_443006-445518' '(gnl|cdd|47695 : 102.0) no description available & (at5g21960 : 96.3) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative EREBP2, Description = Ethylene-responsive element binding protein 2, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08876_132392-138751' '(at1g16060 : 294.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 215.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.8) no description available & (reliability: 588.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09004_54967-57464' '(gnl|cdd|47695 : 92.6) no description available & (at4g11140 : 89.4) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).; cytokinin response factor 1 (CRF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 2 (TAIR:AT4G23750.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09087_68104-70820' '(at1g21910 : 109.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|47695 : 99.6) no description available & (reliability: 218.0) & (original description: Putative ERF012, Description = Ethylene-responsive transcription factor ERF012, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09459_315799-319690' '(at4g13620 : 172.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5584 Blast hits to 5564 proteins in 239 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5562; Viruses - 6; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 344.0) & (original description: Putative ERF062, Description = Ethylene-responsive transcription factor ERF062, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09704_261959-293616' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10169_18650-21735' '(at5g05410 : 147.0) Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stressñinducible genes.; DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 5407 Blast hits to 5383 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5390; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 294.0) & (original description: Putative ap2, Description = AP2 domain containing protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10767_286816-290262' '(at1g25560 : 368.0) Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.; TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|85971 : 95.9) no description available & (reliability: 736.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF02362;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10785_203647-207151' '(gnl|cdd|47695 : 94.9) no description available & (at1g28160 : 93.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11138_192652-199041' '(at2g41710 : 362.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G54320.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 724.0) & (original description: Putative At2g41710, Description = AP2-like ethylene-responsive transcription factor At2g41710, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11515_36200-44109' '(at5g10510 : 417.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 302.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 834.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11694_183866-186516' '(at1g19210 : 144.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 288.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11706_108400-113605' '(gnl|cdd|47695 : 114.0) no description available & (at5g64750 : 97.1) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11756_101007-107164' '(at2g28550 : 332.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 145.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.5) no description available & (reliability: 664.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12210_834945-837526' '(gnl|cdd|47695 : 116.0) no description available & (at5g50080 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12609_248256-251370' '(at5g25390 : 179.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 358.0) & (original description: Putative SHN3, Description = Ethylene-responsive transcription factor SHINE 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12639_1-2354' '(at5g18560 : 153.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 99.6) no description available & (q9lw49|erf4_nicsy : 82.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 306.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf13779_18435-21127' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 99.8) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 182.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf14233_43298-48141' '(at5g61890 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 222.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf14233_43695-140788' '(at5g61890 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 96.1) no description available & (reliability: 192.6) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf15963_148031-150474' '(at1g71520 : 140.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22810.1); Has 4894 Blast hits to 4892 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4889; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|47695 : 84.5) no description available & (reliability: 280.0) & (original description: Putative ERF020, Description = Ethylene-responsive transcription factor ERF020, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf16007_34885-88916' '(at4g25490 : 212.0) Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; C-repeat/DRE binding factor 1 (CBF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 94.2) no description available & (reliability: 424.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf16506_59184-62323' '(at5g52020 : 117.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 234.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf18347_44808-47683' '(at1g64380 : 167.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 334.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf19091_9322-60252' '(gnl|cdd|28902 : 95.7) no description available & (at1g24590 : 95.5) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1.; DORNROSCHEN-like (DRNL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: embryo, leaf primordium, seed; EXPRESSED DURING: C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12980.1); Has 5552 Blast hits to 5472 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5544; Viruses - 2; Other Eukaryotes - 6 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 85.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 191.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf19733_4668-8784' '(at1g53910 : 181.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 181.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 110.0) no description available & (reliability: 362.0) & (original description: Putative erf1, Description = Ethylene transcription factor, PFAM = PF00847)' T
'27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf31747_15518-18522' '(at1g68550 : 92.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28902 : 88.4) no description available & (reliability: 184.0) & (original description: Putative AP2D46, Description = AP2 domain transcription factor-like protein, PFAM = PF00847)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold6637_9525-17700' '(at1g19220 : 683.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 147.0) no description available & (gnl|cdd|38804 : 80.1) no description available & (reliability: 1366.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = PF02362;PF02309;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold19145_19086-30246' '(at5g37020 : 884.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 137.0) no description available & (reliability: 1768.0) & (original description: Putative ARF8, Description = Auxin response factor 8, PFAM = PF02309;PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold81468_257-6091' '(at4g23980 : 582.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 94.6) no description available & (reliability: 1164.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF02309;PF02309;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold176225_1-676' '(at5g62000 : 142.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 284.0) & (original description: Putative arf2, Description = Auxin response factor, PFAM = )' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.5scaffold2344_45794-51112' '(at2g28350 : 665.0) Involved in root cap cell differentiation.; auxin response factor 10 (ARF10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, miRNA binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1499 Blast hits to 1393 proteins in 79 species: Archae - 0; Bacteria - 4; Metazoa - 43; Fungi - 0; Plants - 1444; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 125.0) no description available & (reliability: 1330.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.5scaffold8432_3688-10236' '(at5g62000 : 159.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 318.0) & (original description: Putative arf1, Description = Auxin response factor, PFAM = )' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00001007ctg006_1667-4935' '(at5g37020 : 258.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = )' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00005482ctg014_11394-17420' '(at3g61830 : 648.0) auxin response factor 18 (ARF18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 120.0) no description available & (reliability: 1296.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF02309;PF02309;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00010441ctg008_9278-20464' '(at1g77850 : 477.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 94.2) no description available & (reliability: 954.0) & (original description: Putative ARF17, Description = Auxin response factor 17, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00039121ctg012_1598-10268' '(at1g30330 : 747.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 134.0) no description available & (reliability: 1494.0) & (original description: Putative ARF25, Description = Auxin response factor 25, PFAM = PF02309;PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00045280ctg000_1016-9275' '(at1g30330 : 745.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 138.0) no description available & (reliability: 1490.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02362;PF02309)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00056599ctg003_489-3556' '(at1g77850 : 351.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 90.0) no description available & (reliability: 702.0) & (original description: Putative ARF10, Description = Auxin response factor, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00132_283004-288838' '(at4g23980 : 679.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 115.0) no description available & (reliability: 1358.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF06507;PF02309;PF02309)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00866_111260-117397' '(at4g23980 : 648.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 119.0) no description available & (reliability: 1296.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF06507;PF02309;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00885_2040604-2049623' '(at1g30330 : 739.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 131.0) no description available & (reliability: 1478.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02362;PF02309)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00981_546403-555018' '(at1g19220 : 598.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1196.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF02309;PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf01393_168924-171991' '(at1g77850 : 365.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 91.1) no description available & (reliability: 730.0) & (original description: Putative PGSC0003DMG400027798, Description = Auxin response factor, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf01677_219223-232287' '(at5g37020 : 733.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 136.0) no description available & (reliability: 1466.0) & (original description: Putative arf8, Description = Auxin response factor, PFAM = PF06507;PF02309;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02131_49481-54096' '(at4g30080 : 641.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 120.0) no description available & (reliability: 1282.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02428_188995-200801' '(at1g30330 : 752.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 138.0) no description available & (reliability: 1504.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02309;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02530_935417-946080' '(at1g19220 : 588.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1176.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02309;PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02669_66278-70882' '(at4g30080 : 713.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 124.0) no description available & (reliability: 1426.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf03169_661335-668666' '(at2g33860 : 525.0) ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.; ETTIN (ETT); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification, auxin metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 4 (TAIR:AT5G60450.1); Has 1211 Blast hits to 1200 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 1202; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|69996 : 116.0) no description available & (reliability: 1050.0) & (original description: Putative ARF3, Description = Auxin response factor 3, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf03540_66045-74827' '(at1g19220 : 596.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 142.0) no description available & (reliability: 1192.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02362;PF06507;PF02309)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf04119_193750-201334' '(at1g59750 : 809.0) Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.; auxin response factor 1 (ARF1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.3). & (gnl|cdd|69996 : 126.0) no description available & (reliability: 1618.0) & (original description: Putative ARF1, Description = Auxin response factor 1, PFAM = PF06507;PF02309;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf04907_110517-114738' '(at1g59750 : 233.0) Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.; auxin response factor 1 (ARF1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.3). & (reliability: 466.0) & (original description: Putative arf1, Description = Auxin response factor, PFAM = PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf05444_417251-421847' '(at4g30080 : 754.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 123.0) no description available & (reliability: 1508.0) & (original description: Putative ARF16, Description = Auxin response factor 16, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf05633_53435-64632' '(at1g77850 : 468.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 92.7) no description available & (reliability: 936.0) & (original description: Putative ARF17, Description = Auxin response factor 17, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06123_785161-789951' '(at4g30080 : 697.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 118.0) no description available & (reliability: 1394.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06504_233501-240403' '(at4g23980 : 650.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 116.0) no description available & (reliability: 1300.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF06507;PF02309)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06621_215893-222436' '(at5g62000 : 935.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1870.0) & (original description: Putative ARF2, Description = Auxin response factor 2, PFAM = PF02362;PF02309;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07027_73038-86617' '(at5g37020 : 952.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1904.0) & (original description: Putative ARF8, Description = Auxin response factor 8, PFAM = PF06507;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07465_191657-198972' '(at1g19850 : 967.0) Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder.; MONOPTEROS (MP); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, promoter binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 19 (TAIR:AT1G19220.1); Has 2568 Blast hits to 2208 proteins in 92 species: Archae - 0; Bacteria - 11; Metazoa - 4; Fungi - 3; Plants - 2536; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1934.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF06507;PF02309;PF02362)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07851_429587-435861' '(at2g28350 : 669.0) Involved in root cap cell differentiation.; auxin response factor 10 (ARF10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, miRNA binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1499 Blast hits to 1393 proteins in 79 species: Archae - 0; Bacteria - 4; Metazoa - 43; Fungi - 0; Plants - 1444; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 126.0) no description available & (reliability: 1338.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T
'27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf13690_202015-210340' '(at5g60450 : 838.0) Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity.; auxin response factor 4 (ARF4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT2G33860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69996 : 125.0) no description available & (reliability: 1676.0) & (original description: Putative ARF4, Description = Auxin response factor 4, PFAM = PF02309;PF02362;PF06507)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold2835_4418-9108' '(at1g59940 : 187.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 89.1) no description available & (reliability: 374.0) & (original description: Putative RRA4, Description = Type A response regulator RRA4, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold8069_47993-54305' '(at3g16857 : 105.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400004864, Description = Putative ovule protein, PFAM = PF00249;PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold35734_9141-13861' '(at3g56380 : 174.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold56897_9565-12849' '(at3g57040 : 230.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 88.8) no description available & (reliability: 460.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold81840_76-6572' '(at4g16110 : 475.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 105.0) no description available & (q689g8|prr37_orysa : 91.7) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 950.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold89373_1-4311' '(at1g67710 : 348.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink). & (gnl|cdd|32386 : 110.0) no description available & (q689g9|prr1_orysa : 86.7) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 696.0) & (original description: Putative rr21, Description = Putative B-type response regulator 21, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold184_927992-931627' '(at3g57040 : 211.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.1) no description available & (reliability: 422.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold380_367986-426836' '(at1g59940 : 155.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold1234_325799-395814' '(at5g62920 : 189.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ARR6, Description = Two-component response regulator ARR6, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold5774_73258-76150' '(at3g57040 : 223.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 89.1) no description available & (reliability: 446.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold13277_1-2255' '(at3g56380 : 149.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative dkRR4, Description = Type-A response regulator, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00000925ctg004_5854-12837' '(at3g16857 : 450.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g8|prr37_orysa : 93.2) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: Putative RRB2, Description = Type B response regulator RRB2, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00003732ctg000_1-3174' '(at3g57040 : 226.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 82.2) no description available & (reliability: 452.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00007440ctg014_4956-9592' '(at1g59940 : 201.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 84.9) no description available & (reliability: 402.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00011325ctg000_543-5302' '(at3g56380 : 189.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 81.8) no description available & (reliability: 378.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00026779ctg001_1-1346' '(at4g16110 : 112.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400013776, Description = Two-component system sensor histidine kinase/response regulator, putative, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00060737ctg000_23267-26446' '(at5g62920 : 190.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative RRA6, Description = Type A response regulator RRA6, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00060927ctg001_165-5035' '(at2g25180 : 161.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC03g39750D, Description = BnaC03g39750D protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00151_894130-896769' '(at3g04280 : 99.4) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative RR24, Description = Response regulator 24, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00271_676835-679560' '(at5g26594 : 98.6) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family . It appears to be expressed in floral buds, mature flowers, and pollen. But, unlike the related ARR22 protein, it does not appear to be expressed at the seed:funiculus junction.; response regulator 24 (RR24); FUNCTIONS IN: two-component response regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, male gametophyte, flower, floral bud; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 22 (TAIR:AT3G04280.3); Has 46165 Blast hits to 45373 proteins in 2720 species: Archae - 261; Bacteria - 41094; Metazoa - 16; Fungi - 1330; Plants - 631; Viruses - 10; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35739 : 84.3) no description available & (reliability: 194.8) & (original description: Putative BnaA05g33120D, Description = BnaA05g33120D protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00691_149526-155693' '(at2g25180 : 362.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.9) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00249;PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00825_9768-12541' '(at3g57040 : 190.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.1) no description available & (reliability: 380.0) & (original description: Putative RR3, Description = Type-A response regulator, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00980_375792-378708' '(at3g57040 : 226.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.4) no description available & (reliability: 452.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01243_233951-239063' '(at1g10470 : 207.0) Encodes a two-component response regulator. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 4 (ARR4); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT1G59940.1); Has 56806 Blast hits to 56102 proteins in 2778 species: Archae - 292; Bacteria - 49762; Metazoa - 41; Fungi - 583; Plants - 1526; Viruses - 7; Other Eukaryotes - 4595 (source: NCBI BLink). & (gnl|cdd|29071 : 91.1) no description available & (reliability: 414.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01511_61580-68331' '(at2g25180 : 353.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.1) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 706.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01577_196471-201161' '(at1g59940 : 204.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 90.3) no description available & (reliability: 408.0) & (original description: Putative RRA4, Description = Type A response regulator RRA4, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf02066_434869-441966' '(at3g16857 : 444.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g8|prr37_orysa : 92.8) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf02805_147535-151593' '(at2g25180 : 106.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400035052, Description = , PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf03245_684921-707941' '(at4g16110 : 172.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 91.5) no description available & (reliability: 344.0) & (original description: Putative rr12, Description = Two-component system sensor histidine kinase/response regulator, putative, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf04654_291846-294973' '(at5g62920 : 199.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (gnl|cdd|29071 : 81.1) no description available & (reliability: 398.0) & (original description: Putative dkRR8, Description = Putative A-type response regulator 8, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05324_157591-162753' '(at1g67710 : 352.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink). & (gnl|cdd|32386 : 110.0) no description available & (q689g9|prr1_orysa : 85.9) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 704.0) & (original description: Putative rr14, Description = Putative B-type response regulator 14, PFAM = PF00249;PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05535_452981-456668' '(at3g57040 : 251.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 84.9) no description available & (reliability: 502.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05767_888659-891451' '(at3g04280 : 100.0) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400035602, Description = , PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06207_163880-172363' '(at4g16110 : 175.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 103.0) no description available & (reliability: 350.0) & (original description: Putative rr13, Description = Two-component response regulator ARR13 family protein, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06348_62645-67075' '(at3g16857 : 122.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06348_62654-67251' '(at3g16857 : 114.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = )' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf07437_514344-519331' '(at1g59940 : 202.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 89.9) no description available & (reliability: 404.0) & (original description: Putative ARR3, Description = Two-component response regulator ARR3, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08333_780268-783619' '(at3g57040 : 235.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08368_84321-90694' '(at4g16110 : 323.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g6|prr95_orysa : 94.4) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: Putative rr16, Description = Putative B-type response regulator 16, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08653_391347-401613' '(at3g16857 : 105.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400047331, Description = Putative ovule protein, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08782_260038-267374' '(at3g16857 : 463.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 104.0) no description available & (q689g8|prr37_orysa : 93.2) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 926.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf09424_716594-721353' '(at3g56380 : 191.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 81.8) no description available & (reliability: 382.0) & (original description: Putative RR2, Description = Type-A response regulator, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf14436_205573-211243' '(at3g56380 : 193.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 80.3) no description available & (reliability: 386.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T
'27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf24679_63078-69311' '(at4g16110 : 471.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|32386 : 104.0) no description available & (q689g8|prr37_orysa : 92.4) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00249;PF00072)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold688_41859-46675' '(at1g10120 : 188.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2297 Blast hits to 2289 proteins in 121 species: Archae - 0; Bacteria - 2; Metazoa - 55; Fungi - 29; Plants - 2202; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold1291_5729-8325' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold1929_45374-48265' '(at1g74500 : 85.9) Encodes a basic helixñloopñhelix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.; activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (BS1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BANQUO 3 (TAIR:AT3G47710.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PRE3, Description = Transcription factor PRE3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold2376_11702-15776' '(at1g22490 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative bHLH1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold2689_8712-12187' '(at5g46830 : 211.0) Calcium-binding transcription factor involved in salt stress signaling.; NACL-inducible gene 1 (NIG1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT1G32640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p13027|arrs_maize : 82.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold4803_41949-45727' '(at1g72210 : 214.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5300_2728-6876' '(at3g06120 : 218.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5477_20050-63503' '(at2g14760 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 280.0) & (original description: Putative EN94, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5477_20068-63287' '(at2g14760 : 135.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 270.0) & (original description: Putative EN94, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold6273_32180-37389' '(at4g00050 : 117.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold6645_10048-14806' '(at1g49770 : 130.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative glysoja_033569, Description = Transcription factor bHLH95, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold8590_31476-34371' '(at3g19860 : 120.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative EN138, Description = BHLH transcription factor, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold9682_23789-30449' '(at4g37850 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative , Description = , PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold9988_34817-46784' '(at2g42280 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10023_2856-8886' '(at4g37850 : 87.4) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10462_64133-68733' '(at1g61660 : 139.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 278.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10731_6968-10783' '(at1g68810 : 117.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MTR_5g066080, Description = Transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold12382_18334-29080' '(at4g09820 : 276.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 176.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 552.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold12464_8522-11572' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH113, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold14206_32464-38911' '(at4g37850 : 107.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold14317_36611-39411' '(at5g09750 : 137.0) HECATE 3 (HEC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, transmitting tissue, funicle, septum, vascular system; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2886 Blast hits to 2880 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 2841; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative EN94, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold18842_1731-5265' '(at2g14760 : 153.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 306.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold19290_684-4541' '(at1g27740 : 108.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold19957_9493-16495' '(at4g00050 : 128.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold20751_3904-6617' '(at3g17100 : 127.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold21571_17660-21166' '(at4g37850 : 136.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold24176_9946-13663' '(at2g14760 : 145.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 290.0) & (original description: Putative EN95, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold26682_17181-23027' '(at4g00050 : 125.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold28340_13192-16121' '(at1g30670 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = Transcription factor bHLH52, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34344_12604-15463' '(at4g20970 : 110.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RCOM_1674290, Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34388_9136-12815' '(at1g06150 : 624.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1248.0) & (original description: Putative EMB1444, Description = Pentatricopeptide repeat-containing protein At1g06145, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34681_3307-9233' '(at3g19860 : 214.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold37346_8063-11454' '(at4g37850 : 142.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold39120_4714-12225' '(at3g26744 : 328.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold39174_7181-14172' '(at3g57800 : 196.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold46612_343-6390' '(at4g02590 : 224.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative rau1, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold48802_1-4095' '(at3g26744 : 327.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold49301_1793-5826' '(at4g36540 : 149.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold49510_6253-10594' '(at5g51790 : 89.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative Ccrd_011505, Description = Myc-type, basic helix-loop-helix (BHLH) domain-containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold53234_9333-13037' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold53234_9774-13076' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold62620_4711-10152' '(at5g62610 : 168.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold68913_1-6891' '(at4g36930 : 125.0) Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.; SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold72041_3432-8836' '(at1g49770 : 167.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative BHLH95, Description = Transcription factor bHLH95, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold81794_714-3205' '(at5g01310 : 115.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 107.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold83876_1857-6444' '(at3g07340 : 226.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold89409_1-4677' '(at3g07340 : 207.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold89539_1436-5510' '(at1g51140 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold95176_850-4669' '(at5g65640 : 244.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative ICE4, Description = Inducer of CBF expression 4, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold100513_627-3978' '(at2g31210 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold107005_1-3243' '(at3g24140 : 336.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative FAMA, Description = Transcription factor FAMA, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold27_65584-68655' '(at3g56970 : 139.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA06g07480D, Description = BnaA05g34220D protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold76_245464-248162' '(at3g17100 : 126.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold355_148087-277783' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold468_584865-588778' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold562_629966-633260' '(at4g37850 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold562_630093-633399' '(at4g37850 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold812_275437-279410' '(at2g42280 : 205.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold847_396659-486490' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold882_122666-130323' '(at4g00050 : 144.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGSC0003DMG400025976, Description = Basic helix-loop-helix DNA-binding superfamily protein isoform 3, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1035_421269-438240' '(at4g38070 : 216.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 106.0) no description available & (reliability: 432.0) & (original description: Putative PGSC0003DMG400016132, Description = Basic helix loop helix protein, putative, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1147_730733-734845' '(at3g24140 : 334.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 668.0) & (original description: Putative bHLH82, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1284_431935-450766' '(at1g68810 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative EN53, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1643_58446-69192' '(at4g09820 : 234.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 146.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 468.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1693_324709-335746' '(at2g20180 : 172.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 344.0) & (original description: Putative PIF1, Description = Transcription factor PIF1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1790_344530-351459' '(at2g42300 : 134.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1855_239331-242872' '(at5g65640 : 238.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold2661_370732-374111' '(at5g51790 : 84.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400010526, Description = Basic helix-loop-helix transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold3748_6875-17195' '(at4g25410 : 84.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400027959, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4463_121020-125256' '(at3g47640 : 114.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 228.0) & (original description: Putative BHLH15, Description = BHLH domain class transcription factor, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4498_86726-91648' '(at3g06120 : 141.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative SPCH, Description = Transcription factor SPEECHLESS, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4501_167126-173579' '(at5g65640 : 224.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative EN44, Description = Transcription factor bHLH93, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4709_97934-104944' '(at4g00050 : 129.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5123_682-7290' '(at2g16910 : 376.0) Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters.; ABORTED MICROSPORES (AMS); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, sepal, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G26744.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative bHLH, Description = BHLH transcription factor, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5454_154683-160124' '(at5g62610 : 224.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5518_65025-70845' '(at2g24260 : 140.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold6751_29599-35876' '(at2g27230 : 177.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold6757_26083-29869' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold7324_31818-37255' '(at5g62610 : 171.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold8668_28516-32276' '(at3g21330 : 197.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold10013_1436-5955' '(at2g42280 : 133.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00001020ctg001_1-4056' '(at2g14760 : 163.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 326.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00001631ctg006_17119-23007' '(at4g00050 : 134.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative bHLH7, Description = Transcription factor UNE10, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00003002ctg001_1-1527' '(at4g37850 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00004501ctg017_1-3796' '(at1g22490 : 189.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative bHLH82, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00004957ctg024_1046-8400' '(at4g36930 : 127.0) Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.; SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00005031ctg010_20166-25068' '(at1g05805 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G43140.2); Has 2662 Blast hits to 2007 proteins in 137 species: Archae - 2; Bacteria - 54; Metazoa - 424; Fungi - 144; Plants - 1472; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00005398ctg001_327-3157' '(at5g01310 : 115.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 109.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00006325ctg012_18028-21767' '(at1g72210 : 240.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00007460ctg007_1-3077' '(at3g24140 : 245.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00010266ctg019_3909-10856' '(at3g57800 : 210.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00010501ctg004_224-6254' '(at4g37850 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00012728ctg006_6009-12350' '(at4g02590 : 204.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00013946ctg001_11898-14827' '(at2g34820 : 89.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G30670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = Transcription factor bHLH52, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00014367ctg001_4511-8644' '(at1g72210 : 236.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015312ctg001_3320-7955' '(at3g20640 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015337ctg000_2990-7186' '(at4g00870 : 213.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015775ctg008_76-4105' '(at2g14760 : 158.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 316.0) & (original description: Putative EN94, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00016390ctg003_17674-24284' '(at4g02590 : 213.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00016434ctg010_6115-10774' '(at1g61660 : 106.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 212.0) & (original description: Putative , Description = Ethylene-responsive family protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00017226ctg006_6444-9094' '(at3g17100 : 126.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00018799ctg001_235-4577' '(at1g06170 : 160.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00018799ctg004_648-4099' '(at2g31210 : 195.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative EAT1, Description = Transcription factor EAT1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020790ctg024_1431-4205' '(at3g19860 : 184.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative EN138, Description = BHLH transcription factor, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020960ctg005_3359-8543' '(at5g53210 : 229.0) Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6.; SPEECHLESS (SPCH); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06120.1); Has 3630 Blast hits to 3207 proteins in 306 species: Archae - 0; Bacteria - 54; Metazoa - 562; Fungi - 218; Plants - 2401; Viruses - 108; Other Eukaryotes - 287 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative SPCH, Description = Transcription factor SPEECHLESS, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020974ctg004_973-4834' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00021253ctg008_1-3327' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00021384ctg003_4396-7994' '(at5g51790 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BHLH36, Description = Transcription factor bHLH36, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00022664ctg011_4737-9091' '(at2g42280 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00026194ctg004_472-4308' '(at3g28857 : 92.8) basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT5G39860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PRE5, Description = Transcription factor PRE5, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00026245ctg003_2771-5898' '(at3g26744 : 117.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00027024ctg001_1293-6619' '(at5g54680 : 229.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00030869ctg004_1-6905' '(at2g24260 : 183.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00032880ctg004_1-2363' '(at2g31220 : 159.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00043986ctg002_2558-6670' '(at3g07340 : 170.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00044258ctg005_1-7616' '(at2g24260 : 166.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00045919ctg009_600-9538' '(at1g35460 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09180.1); Has 1965 Blast hits to 1959 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1958; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BHLH80, Description = Transcription factor bHLH80, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00047129ctg001_1-4101' '(at3g07340 : 232.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048487ctg001_14672-17844' '(at1g09250 : 100.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G17100.2); Has 250 Blast hits to 250 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative BHLH149, Description = Transcription factor bHLH149, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048537ctg009_30173-34355' '(at1g27740 : 107.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048586ctg000_9939-13381' '(at2g31210 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative DTD, Description = Basic helix-loop-helix protein TIP2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00056939ctg000_1427-4594' '(at4g37850 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101ctg15612_1594-4554' '(at1g30670 : 82.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative EN123, Description = Transcription factor bHLH52, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00024_75134-78945' '(at5g62610 : 207.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00047_374011-390434' '(at1g05805 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G43140.2); Has 2662 Blast hits to 2007 proteins in 137 species: Archae - 2; Bacteria - 54; Metazoa - 424; Fungi - 144; Plants - 1472; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative rau1, Description = Predicted protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00067_319165-322623' '(at3g21330 : 183.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00069_347139-351123' '(at4g37850 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00069_822017-833163' '(at5g65640 : 229.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BHLH61, Description = Transcription factor bHLH61, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00129_55643-58377' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00153_78428-83980' '(at3g26744 : 326.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00153_80706-83869' '(at3g26744 : 133.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00165_1018719-1025162' '(at2g27230 : 328.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00182_64345-67886' '(at3g56970 : 147.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative EN7, Description = Transcription factor ORG2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00228_1108272-1112417' '(at3g07340 : 229.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00276_16919-28639' '(at3g56770 : 80.1) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G41130.1); Has 75 Blast hits to 75 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00376_95991-100094' '(at5g50915 : 162.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative Os08g0536800, Description = BHLH transcription factor-like protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00378_329298-331897' '(at3g50330 : 137.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7xaq6|lax_orysa : 84.7) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 274.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00397_524743-532400' '(at4g00050 : 169.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative EN108, Description = AtbHLH16, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00415_27959-33957' '(at4g02590 : 178.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00415_358964-364442' '(at4g14410 : 186.0) basic Helix-Loop-Helix 104 (bHLH104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G23210.1); Has 891 Blast hits to 888 proteins in 95 species: Archae - 2; Bacteria - 8; Metazoa - 23; Fungi - 3; Plants - 829; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00442_131465-134553' '(at5g50010 : 99.0) sequence-specific DNA binding transcription factors;transcription regulators; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00446_555783-558583' '(at4g00120 : 137.0) INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00522_118699-122289' '(at1g73830 : 176.0) BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1). & (reliability: 352.0) & (original description: Putative BEE3, Description = Transcription factor BEE 3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00565_10542-15439' '(at1g01260 : 546.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (p13027|arrs_maize : 88.2) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1092.0) & (original description: Putative BHLH13, Description = Transcription factor bHLH13, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00603_91146-94966' '(at1g01260 : 469.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (reliability: 938.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00639_317081-334106' '(at2g28160 : 225.0) Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.; FER-like regulator of iron uptake (FRU); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of iron ion transport, response to cytokinin stimulus, response to iron ion, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 2366 Blast hits to 2362 proteins in 114 species: Archae - 2; Bacteria - 0; Metazoa - 3; Fungi - 9; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative FIT, Description = Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00690_293985-301599' '(at3g57800 : 211.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00698_202786-207354' '(at2g43010 : 149.0) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.; phytochrome interacting factor 4 (PIF4); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 6 (TAIR:AT3G59060.1); Has 4535 Blast hits to 4529 proteins in 355 species: Archae - 0; Bacteria - 0; Metazoa - 936; Fungi - 188; Plants - 3370; Viruses - 2; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00723_155503-158520' '(at1g06150 : 612.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1224.0) & (original description: Putative EMB1444, Description = Pentatricopeptide repeat-containing protein At1g06145, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00765_38646-42424' '(at2g31210 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative DTD, Description = AtbHLH89, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00821_854495-859117' '(at1g68920 : 246.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative BHLH49, Description = Transcription factor bHLH49, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00893_15683-20400' '(at4g34530 : 173.0) Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.; cryptochrome-interacting basic-helix-loop-helix 1 (CIB1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2243 Blast hits to 2231 proteins in 129 species: Archae - 0; Bacteria - 9; Metazoa - 30; Fungi - 27; Plants - 2139; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative HBI1, Description = Transcription factor HBI1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00961_104522-110976' '(at4g02590 : 208.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00985_451258-455457' '(at2g42280 : 205.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01005_158230-161321' '(at5g64340 : 94.7) Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation.; SUPPRESSOR OF ACAULIS 51 (SAC51); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G09460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01006_26903-30726' '(at1g01260 : 531.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (p13027|arrs_maize : 86.3) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1062.0) & (original description: Putative BHLH13, Description = Transcription factor bHLH13, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01102_619840-624969' '(at4g00870 : 227.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01139_373745-378209' '(at1g72210 : 216.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01146_183103-187580' '(at3g24140 : 341.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative bHLH1, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01171_820670-824931' '(at3g24140 : 333.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative FAMA, Description = FAMA(E), PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01253_13538-18102' '(at2g42280 : 215.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01255_43792-47940' '(at3g06120 : 207.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01316_507460-511976' '(at5g65640 : 236.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01350_424728-433098' '(at1g49770 : 171.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative BHLH95, Description = Transcription factor bHLH95, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01411_45658-48549' '(at1g74500 : 88.2) Encodes a basic helixñloopñhelix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.; activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (BS1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BANQUO 3 (TAIR:AT3G47710.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative PRE3, Description = Transcription factor PRE3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01523_96358-102635' '(at2g27230 : 177.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01577_91436-96343' '(at1g59640 : 230.0) A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.; BIG PETAL P (BPEp); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: petal morphogenesis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G62610.1); Has 2416 Blast hits to 2408 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 166; Fungi - 35; Plants - 2213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01585_119330-122331' '(at1g30670 : 90.9) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative EN124, Description = Transcription factor bHLH52, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01700_245389-252157' '(at2g14760 : 155.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 310.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01700_288997-293517' '(at2g14760 : 163.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 326.0) & (original description: Putative EN94, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01710_433281-437261' '(at2g40200 : 112.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 2073 Blast hits to 2066 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 255; Fungi - 6; Plants - 1802; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative EN56, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01819_477883-484236' '(at1g31050 : 148.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 358 Blast hits to 358 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative EN66, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01903_338400-341717' '(at2g40200 : 132.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 2073 Blast hits to 2066 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 255; Fungi - 6; Plants - 1802; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative EN57, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01954_306463-309785' '(at4g00870 : 250.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (p13027|arrs_maize : 83.6) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative BHLH14, Description = Transcription factor bHLH14, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02004_61122-65396' '(at4g37850 : 175.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p13027|arrs_maize : 80.5) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 350.0) & (original description: Putative bHLH, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02044_491849-496407' '(at4g38070 : 251.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 86.8) no description available & (reliability: 502.0) & (original description: Putative PGSC0003DMG400037454, Description = Uncharacterized protein At4g38062 family, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02073_305159-311189' '(at4g37850 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02172_406104-412066' '(at4g00050 : 134.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02216_264320-276287' '(at2g42280 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02239_223731-230247' '(at1g35460 : 169.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09180.1); Has 1965 Blast hits to 1959 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1958; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative BHLH80, Description = Transcription factor bHLH80, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02262_223519-227993' '(at5g54680 : 253.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02289_188228-201606' '(at1g69010 : 139.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative TCM_011433, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02398_22102-26874' '(at1g10610 : 235.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1439 Blast hits to 1421 proteins in 116 species: Archae - 0; Bacteria - 21; Metazoa - 63; Fungi - 6; Plants - 1338; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative BnaA06g06490D, Description = BHLH transcription factor, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02417_736716-850550' '(at4g37850 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02420_747118-759243' '(at4g25410 : 81.6) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400027959, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02420_832318-835958' '(at5g51790 : 113.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA10g07750D, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02440_122-4787' '(at3g20640 : 165.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02459_794217-803254' '(at4g37850 : 90.1) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02459_864581-871028' '(at4g37850 : 108.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02631_458404-462761' '(at1g49770 : 94.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400025780, Description = Transcription factor bHLH95, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02756_70375-75263' '(at3g07340 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02757_365229-371658' '(at5g57150 : 219.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.3). & (reliability: 438.0) & (original description: Putative BHLH35, Description = Transcription factor bHLH35, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02761_71053-77444' '(at4g00050 : 103.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ALC, Description = Transcription factor PIF1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02794_730487-732935' '(at5g54680 : 197.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative bHLH2, Description = Transcription factor ILR3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02821_1530685-1534816' '(at1g22490 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BHLH71, Description = Transcription factor bHLH71, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02915_417109-421234' '(at4g36540 : 142.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02955_97271-100724' '(at1g62975 : 115.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12540.1); Has 533 Blast hits to 533 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 0; Plants - 445; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RCOM_1498390, Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02955_259836-263167' '(at5g51790 : 129.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BHLH120, Description = Transcription factor bHLH120, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03047_120946-123719' '(at4g21330 : 122.0) Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes.; DYSFUNCTIONAL TAPETUM 1 (DYT1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: tapetum, floral meristem, anther primordium; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1140 Blast hits to 1140 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative DYT1, Description = Transcription factor DYT1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03068_446112-449898' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ICE4, Description = Inducer of CBF expression 4, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03070_115376-118089' '(at3g17100 : 127.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03105_131600-137250' '(at4g38070 : 214.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 101.0) no description available & (reliability: 428.0) & (original description: Putative At4g38062, Description = Putative ovule protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03202_689205-696239' '(at5g01310 : 782.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37345 : 233.0) no description available & (reliability: 1564.0) & (original description: Putative APTX, Description = Aprataxin, putative, PFAM = PF01661;PF11969;PF13671)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03202_926709-929524' '(at5g01310 : 121.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 111.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 242.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03309_740778-744952' '(at1g68810 : 124.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TCM_029711, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03421_421678-424767' '(at5g50010 : 104.0) sequence-specific DNA binding transcription factors;transcription regulators; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03455_176062-178790' '(at1g29950 : 100.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G50010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative EN130, Description = AtbHLH144, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03577_204842-209821' '(at3g07340 : 249.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03596_64878-69023' '(at1g68810 : 116.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative Os01g0218100, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03670_258174-262026' '(at3g56770 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G41130.1); Has 75 Blast hits to 75 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative , Description = , PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03882_88117-90905' '(at5g09750 : 138.0) HECATE 3 (HEC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, transmitting tissue, funicle, septum, vascular system; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2886 Blast hits to 2880 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 2841; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative EN94, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03894_474285-477568' '(at4g00870 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03934_556500-568042' '(at2g20180 : 119.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 238.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03948_324955-335186' '(at1g06150 : 406.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 812.0) & (original description: Putative F1N19, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04206_220987-231968' '(at2g20180 : 162.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 324.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04217_1155676-1158410' '(at5g08510 : 169.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative PGSC0003DMG400024200, Description = JMS10C05.1 protein, PFAM = PF13041)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04283_680839-691731' '(at4g09820 : 235.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 146.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 470.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04287_209631-214227' '(at1g10610 : 226.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1439 Blast hits to 1421 proteins in 116 species: Archae - 0; Bacteria - 21; Metazoa - 63; Fungi - 6; Plants - 1338; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative BnaA06g06490D, Description = BnaA06g06490D protein, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04316_230964-237472' '(at5g54680 : 241.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04386_915102-920009' '(at1g51140 : 148.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative rau1, Description = Transcription factor RAU1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04445_443947-452056' '(at1g06150 : 198.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 396.0) & (original description: Putative F1N19, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04455_88422-92161' '(at1g72210 : 236.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04654_349282-352577' '(at3g62890 : 293.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G40405.1); Has 35241 Blast hits to 13566 proteins in 229 species: Archae - 0; Bacteria - 18; Metazoa - 37; Fungi - 30; Plants - 34726; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative PGSC0003DMG400022163, Description = DAG kinase, PFAM = PF13041;PF13041;PF01535;PF12854)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04657_598422-602516' '(at2g14760 : 155.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 310.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04686_265263-269902' '(at1g68810 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MTR_5g032375, Description = Helix loop helix DNA-binding domain protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04933_266489-274161' '(at5g56960 : 201.0) basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G57150.4); Has 2180 Blast hits to 2174 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 44; Plants - 1927; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative PGSC0003DMG400022043, Description = Basic helix-loop-helix DNA-binding family protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04995_561066-564077' '(at3g50330 : 125.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH113, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05115_293532-300461' '(at2g42300 : 185.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05175_216111-246233' '(at1g68810 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative EN53, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05371_35699-39895' '(at4g00870 : 208.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05413_497055-502837' '(at3g20640 : 176.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05417_335300-341341' '(at4g37850 : 116.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05458_97915-101372' '(at1g50270 : 301.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 37475 Blast hits to 13706 proteins in 234 species: Archae - 0; Bacteria - 8; Metazoa - 62; Fungi - 67; Plants - 36828; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 542.0) & (original description: Putative PGSC0003DMG400008944, Description = Putative uncharacterized protein Sb06g020256, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05483_16356-19658' '(at1g06170 : 156.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05483_16385-20099' '(at1g06170 : 152.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05612_127711-136211' '(at1g06150 : 239.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 478.0) & (original description: Putative F1N19, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05713_385388-388247' '(at4g20970 : 111.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative MTR_2g013920, Description = Helix loop helix DNA-binding domain protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05713_389056-392847' '(at4g20970 : 130.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At4g20970, Description = Basic helix-loop-helix domain-containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05912_135009-141962' '(at3g26744 : 329.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative SCRM2, Description = Transcription factor SCREAM2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06009_90378-99592' '(at4g00050 : 127.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06094_182337-193698' '(at5g54680 : 218.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative bHLH2, Description = BHLH transcriptional factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06113_79404-85711' '(at5g54680 : 211.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative TIDP3430, Description = BHLH transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06248_271911-275332' '(at4g16430 : 447.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1); Has 2977 Blast hits to 2635 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 31; Plants - 2859; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative BHLH3, Description = Transcription factor bHLH3, PFAM = PF14215;PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06467_187803-191625' '(at1g27740 : 108.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06516_32929-35999' '(at5g09460 : 97.4) sequence-specific DNA binding transcription factors;transcription regulators; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 178 Blast hits to 178 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 1; Plants - 159; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06618_145487-149860' '(at3g21330 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06621_194689-203323' '(at3g26744 : 326.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06623_107740-112896' '(at1g25330 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2000 Blast hits to 1994 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 45; Plants - 1913; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaC02g22470D, Description = BnaC02g22470D protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06860_1970-5511' '(at5g65640 : 237.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06872_164438-167944' '(at4g37850 : 135.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06872_259360-262654' '(at4g37850 : 141.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06939_546097-549902' '(at1g72210 : 225.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07073_512924-517313' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07105_32109-39259' '(at1g06150 : 400.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 800.0) & (original description: Putative F1N19, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07829_446915-451347' '(at3g47640 : 118.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 236.0) & (original description: Putative BHLH47, Description = Transcription factor bHLH47, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07919_1896-6400' '(at1g68920 : 278.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BHLH49, Description = Transcription factor bHLH49, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08001_242524-246058' '(at2g14760 : 153.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 306.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08006_216303-221599' '(at3g07340 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08127_108370-117638' '(at1g69010 : 248.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative BIM2, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08298_303134-314263' '(at2g20180 : 182.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 364.0) & (original description: Putative PIF1, Description = Transcription factor PIF1, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08333_68260-75371' '(at3g56970 : 143.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative BnaA07g17110D, Description = BnaA07g17110D protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08333_68263-71334' '(at3g56970 : 139.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative EN10, Description = Transcription factor ORG2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08394_109459-125056' '(at1g69010 : 252.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative BIM2, Description = Transcription factor BIM2, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08573_50801-54560' '(at4g25410 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010526, Description = Transcription factor bHLH120 family, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08672_274689-279731' '(at1g32640 : 509.0) Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.; MYC2; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 4078 Blast hits to 3762 proteins in 672 species: Archae - 2; Bacteria - 2; Metazoa - 761; Fungi - 108; Plants - 3150; Viruses - 25; Other Eukaryotes - 30 (source: NCBI BLink). & (p13526|arlc_maize : 94.7) Anthocyanin regulatory Lc protein - Zea mays (Maize) & (reliability: 946.0) & (original description: Putative myc2, Description = MYC2, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf09368_266995-270816' '(at1g72210 : 234.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf09861_179462-183709' '(at1g66470 : 171.0) ROOT HAIR DEFECTIVE6 (RHD6); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: RHD SIX-LIKE 1 (TAIR:AT5G37800.1); Has 2452 Blast hits to 2438 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 2; Plants - 2416; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative EN95, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf10031_257993-261537' '(at2g41130 : 188.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast envelope; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 912 Blast hits to 912 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 26; Plants - 873; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative EN53, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf10241_13769-17300' '(at2g28160 : 219.0) Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.; FER-like regulator of iron uptake (FRU); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of iron ion transport, response to cytokinin stimulus, response to iron ion, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 2366 Blast hits to 2362 proteins in 114 species: Archae - 2; Bacteria - 0; Metazoa - 3; Fungi - 9; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative FIT, Description = Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11491_120542-124074' '(at1g73830 : 173.0) BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1). & (reliability: 346.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11531_21322-26538' '(at1g68920 : 286.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11689_12254-21555' '(at5g41315 : 456.0) encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.; GLABROUS 3 (GL3); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13526|arlc_maize : 220.0) Anthocyanin regulatory Lc protein - Zea mays (Maize) & (reliability: 912.0) & (original description: Putative GL3, Description = Transcription factor GLABRA 3, PFAM = PF00010;PF14215)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf12293_104871-113881' '(at3g19860 : 209.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13099_12573-20450' '(at3g24140 : 235.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13886_158903-163798' '(at4g36540 : 141.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13942_108011-112579' '(at1g51140 : 149.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14344_68668-77936' '(at3g57800 : 212.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14843_144486-149296' '(at1g10120 : 200.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2297 Blast hits to 2289 proteins in 121 species: Archae - 0; Bacteria - 2; Metazoa - 55; Fungi - 29; Plants - 2202; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14882_157604-161541' '(at5g43650 : 112.0) BHLH92; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative WIN4, Description = Basic helix-loop-helix protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf16706_123444-131649' '(at2g24260 : 181.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf16888_55925-61890' '(at3g19860 : 221.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf17051_26026-28958' '(at4g21330 : 117.0) Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes.; DYSFUNCTIONAL TAPETUM 1 (DYT1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: tapetum, floral meristem, anther primordium; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1140 Blast hits to 1140 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative RERJ1, Description = OSJNBb0018A10.7 protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf18898_163988-168373' '(at1g06170 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf19439_7504-11845' '(at5g51790 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400007559, Description = Basic helix-loop-helix transcription factor, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf22360_19139-22713' '(at1g72210 : 206.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative bHLH1, Description = Transcription factor bHLH96, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf23305_167152-172399' '(at3g50330 : 128.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf24249_42803-47039' '(at3g47640 : 118.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 236.0) & (original description: Putative BHLH15, Description = BHLH domain class transcription factor, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf27908_177338-181997' '(at1g61660 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 276.0) & (original description: Putative ACT1, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf32603_15437-23701' '(at3g57800 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf34081_44680-48071' '(at4g36540 : 166.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative BnaA09g09600D, Description = BnaA09g09600D protein, PFAM = PF00010)' T
'27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf37335_55654-60077' '(at3g47640 : 117.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 234.0) & (original description: Putative At3g47640, Description = DNA-binding protein, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold43494_10047-15650' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.2) no description available & (reliability: 290.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold43494_10267-15169' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 83.3) no description available & (reliability: 308.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold59393_5761-11702' '(at1g28050 : 281.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT2G33500.2); Has 3090 Blast hits to 2261 proteins in 129 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 2990; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative COL14, Description = Zinc finger protein CONSTANS-LIKE 14, PFAM = PF06203;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold63313_2730-5525' '(at4g27310 : 103.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative COL1, Description = B-box type zinc finger family protein, putative, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold169_756857-759674' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold1064_39054-45567' '(at1g68190 : 127.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BBX8, Description = Zinc finger constans-like protein, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold1967_364923-368601' '(at4g27310 : 99.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative COL1, Description = COL domain class transcription factor, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00003483ctg005_442-5356' '(at1g04500 : 172.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 84.9) no description available & (reliability: 326.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00009241ctg007_1759-4576' '(at5g54470 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G27310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00016388ctg011_42010-45525' '(at1g78600 : 146.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 292.0) & (original description: Putative BBX22, Description = B-box-type zinc finger protein 22, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00019179ctg002_1-2343' '(at3g07650 : 210.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BBX8, Description = C2C2-CO-like transcription factor, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00021336ctg000_3208-6994' '(at4g27310 : 99.8) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative COL3, Description = COL domain class transcription factor, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00025899ctg025_31289-33391' '(at5g54470 : 117.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G27310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative COL1, Description = COL domain class transcription factor, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00035268ctg000_15047-20928' '(at1g68190 : 180.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BBX8, Description = B-box zinc finger family protein, putative isoform 2, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00116_555718-558498' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00152_11864-15720' '(at1g75540 : 218.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative BBX20, Description = B-box zinc finger protein 20, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00577_1262140-1266181' '(at1g25440 : 286.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative COL16, Description = Zinc finger protein CONSTANS-LIKE 16, PFAM = PF00643;PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00679_128285-130638' '(at3g21890 : 81.6) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative BnaC01g42110D, Description = BnaC01g42110D protein, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00725_181159-185384' '(at1g68520 : 234.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G25440.1); Has 3472 Blast hits to 2352 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 1; Plants - 3365; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative COL7, Description = Zinc finger protein CONSTANS-LIKE 7, PFAM = PF00643;PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00753_374288-378780' '(at1g25440 : 280.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative CIA2, Description = CCT domain-containing protein, PFAM = PF00643;PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00823_124804-130193' '(at2g47890 : 241.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative COL13, Description = Zinc finger protein CONSTANS-LIKE 13, PFAM = PF00643;PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01017_656385-661299' '(at1g04500 : 171.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 85.3) no description available & (reliability: 332.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01409_639724-643297' '(at5g57660 : 288.0) CONSTANS-like 5 (COL5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87043 : 85.6) no description available & (reliability: 576.0) & (original description: Putative COL5, Description = Zinc finger protein CONSTANS-LIKE 5, PFAM = PF06203;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01433_940199-943975' '(at4g38960 : 202.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT2G21320.1). & (reliability: 404.0) & (original description: Putative BBX19, Description = B-box zinc finger protein 19, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01983_934624-941083' '(at1g78600 : 276.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 552.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02210_308786-314727' '(at1g28050 : 280.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT2G33500.2); Has 3090 Blast hits to 2261 proteins in 129 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 2990; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative COL15, Description = Zinc finger protein CONSTANS-LIKE 15, PFAM = PF06203;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02594_1045351-1049143' '(at1g75540 : 221.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BBX21, Description = B-box zinc finger protein 21, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02778_458735-462413' '(at4g27310 : 99.8) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative BnaC09g30830D, Description = BnaC09g30830D protein, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02794_171440-173811' '(at3g21890 : 89.7) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative PGSC0003DMG400026169, Description = B-box type zinc finger family protein, putative, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03506_312447-318366' '(at3g07650 : 261.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BBX8, Description = C2C2-CO-like transcription factor, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03555_369120-374807' '(at5g48250 : 313.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative BBX8, Description = B-box-type zinc-finger protein, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03929_628646-631333' '(at4g27310 : 105.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative COL1, Description = B-box type zinc finger family protein, putative, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04109_774667-780447' '(at1g68190 : 125.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BBX8, Description = B-box type zinc finger protein with CCT domain isoform 1, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04122_6193-11284' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative COL16, Description = COL domain class transcription factor, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04528_606528-621541' '(at1g78600 : 254.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 508.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04629_81839-85714' '(at1g75540 : 224.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BBX21, Description = B-box zinc finger protein 21, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04664_103543-113959' '(at4g38960 : 227.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT2G21320.1). & (reliability: 454.0) & (original description: Putative BBX19, Description = B-box zinc finger protein 19, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04664_426377-431632' '(at1g75540 : 201.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BnaC01g00140D, Description = BnaC01g00140D protein, PFAM = PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf05108_238295-244246' '(at5g48250 : 319.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative COL9, Description = Zinc finger protein CONSTANS-LIKE 9, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf05311_217209-224517' '(at1g06040 : 225.0) Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.; SALT TOLERANCE (STO); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homologue (TAIR:AT2G31380.1); Has 1915 Blast hits to 1323 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1814; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative BBX24, Description = B-box zinc finger protein 24, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf06454_291933-295146' '(at5g24930 : 291.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|87043 : 82.6) no description available & (reliability: 582.0) & (original description: Putative COL4, Description = Zinc finger protein CONSTANS-LIKE 4, PFAM = PF06203;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf10423_275269-279386' '(at3g21880 : 276.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT4G15250.1); Has 2815 Blast hits to 2182 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 2726; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative COL12, Description = Zinc finger protein CONSTANS-LIKE 12, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf14973_170935-177632' '(at1g68190 : 177.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative COL1, Description = Zinc finger constans-like protein, PFAM = )' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf16585_327087-349633' '(at1g78600 : 265.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 530.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf18577_111147-117526' '(at3g07650 : 303.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative COL9, Description = Zinc finger protein CONSTANS-LIKE 9, PFAM = PF06203)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf19155_42157-45702' '(at5g24930 : 271.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|87043 : 81.8) no description available & (reliability: 542.0) & (original description: Putative COL4, Description = Zinc finger protein CONSTANS-LIKE 4, PFAM = PF06203;PF00643;PF00643)' T
'27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf31945_47695-52517' '(at1g25440 : 275.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative COL16, Description = Zinc finger protein CONSTANS-LIKE 16, PFAM = PF00643;PF06203)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold1354_17347-20523' '(at1g64620 : 130.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 260.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold2757_44357-47393' '(at4g24060 : 134.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G64620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 96.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative NtBBF2, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold5927_521-3411' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 226.0) & (original description: Putative DOF5, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold7244_44757-48233' '(at3g61850 : 166.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 332.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold10003_29087-32409' '(at1g28310 : 122.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold12869_1-2978' '(at2g37590 : 148.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 114.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 296.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold30913_7089-11202' '(at3g47500 : 243.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 96.3) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 486.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold30971_18372-21411' '(at3g55370 : 136.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 98.6) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 272.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold60842_6132-8938' '(at5g60850 : 115.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 230.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold62463_5241-8843' '(at2g37590 : 140.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 97.8) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 280.0) & (original description: Putative DOF8, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold86940_769-3374' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 114.0) no description available & (o24463|pbf_maize : 95.9) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold88857_2644-5164' '(at1g29160 : 148.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G34140.1); Has 1076 Blast hits to 1071 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1071; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (p38564|mnb1a_maize : 99.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 296.0) & (original description: Putative CDF1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold104_321353-324560' '(at3g55370 : 133.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 266.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold376_584768-587807' '(at3g55370 : 136.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 97.8) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 272.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold2716_134490-137712' '(at5g02460 : 142.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 102.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 284.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold4372_124212-127390' '(at4g24060 : 125.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G64620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold4607_99701-103315' '(at2g28510 : 134.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|66392 : 123.0) no description available & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold6999_65924-69526' '(at2g37590 : 141.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 98.2) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 282.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00000296ctg019_24089-26531' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00005477ctg013_1-2414' '(gnl|cdd|66392 : 109.0) no description available & (at5g62940 : 93.2) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 186.4) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00005477ctg034_4249-7574' '(gnl|cdd|66392 : 121.0) no description available & (at1g28310 : 120.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00008326ctg001_1-1999' '(at1g64620 : 129.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 98.6) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 258.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00012310ctg011_2472-5785' '(at5g02460 : 134.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00012788ctg002_1-3122' '(at2g37590 : 150.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 113.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 300.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00023083ctg002_7446-12252' '(at5g39660 : 243.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 486.0) & (original description: Putative ovg30, Description = Putative DNA-binding protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00024833ctg006_1479-5006' '(at5g39660 : 234.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 126.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 468.0) & (original description: Putative CDF1, Description = Cyclic dof factor 1, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00027552ctg004_38489-41871' '(at2g28510 : 135.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (o24463|pbf_maize : 122.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (gnl|cdd|66392 : 119.0) no description available & (reliability: 270.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101ctg15867_1-2104' '(at5g02460 : 138.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 101.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 276.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00089_404517-407260' '(at5g60200 : 135.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 124.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (gnl|cdd|66392 : 123.0) no description available & (reliability: 270.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00193_294627-299410' '(at5g39660 : 236.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 125.0) no description available & (p38564|mnb1a_maize : 100.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 472.0) & (original description: Putative CDF2, Description = Cyclic dof factor 2, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00245_386354-390566' '(at3g47500 : 226.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (p38564|mnb1a_maize : 95.1) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 452.0) & (original description: Putative SRF1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00808_490373-494067' '(at3g61850 : 143.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 117.0) no description available & (o24463|pbf_maize : 111.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 286.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf01017_73799-76662' '(at3g52440 : 125.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 122.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf01214_61184-68609' '(at1g64620 : 119.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative Dof8, Description = Dof protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02207_1152657-1155906' '(at5g62940 : 149.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 116.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 298.0) & (original description: Putative Dof14, Description = DNA binding with one finger 14, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02237_1064570-1067777' '(at5g62940 : 144.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 122.0) no description available & (o24463|pbf_maize : 115.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 288.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02771_309393-312995' '(at2g37590 : 140.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 280.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02907_694881-698319' '(at5g65590 : 164.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 113.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 328.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03309_886461-888973' '(at1g29160 : 156.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G34140.1); Has 1076 Blast hits to 1071 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1071; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 312.0) & (original description: Putative dof8, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03551_16059-19024' '(gnl|cdd|66392 : 122.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 224.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03761_73640-77413' '(at2g46590 : 121.0) encodes a protein containing Dof zinc finger motifs. expression is limited to vascular system of the mother plant. recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. mutants are defective in seed germination. mutants are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination.; DOF AFFECTING GERMINATION 2 (DAG2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 99.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 242.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04006_236932-239891' '(gnl|cdd|66392 : 118.0) no description available & (at3g52440 : 116.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p38564|mnb1a_maize : 95.5) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative dof2, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04384_516837-519685' '(gnl|cdd|66392 : 110.0) no description available & (at5g60200 : 106.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 212.0) & (original description: Putative Dof6, Description = Dof6 transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04410_315585-318550' '(gnl|cdd|66392 : 124.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 224.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04418_894320-897282' '(gnl|cdd|66392 : 120.0) no description available & (at3g52440 : 118.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p38564|mnb1a_maize : 96.7) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 236.0) & (original description: Putative Dof22, Description = Dof protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05060_573265-578220' '(at5g39660 : 250.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (p38564|mnb1a_maize : 96.3) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative Dof1, Description = DNA binding with one finger 1, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05206_306355-309413' '(at3g55370 : 146.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 115.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 292.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05272_227729-230334' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 95.9) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative Dof9, Description = Dof protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05551_340345-344094' '(at5g62940 : 149.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 298.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05674_46357-49183' '(at3g50410 : 139.0) Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development.; OBF binding protein 1 (OBP1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT5G66940.1); Has 1129 Blast hits to 1124 proteins in 68 species: Archae - 0; Bacteria - 9; Metazoa - 17; Fungi - 6; Plants - 1084; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66392 : 117.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 278.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06127_121024-124638' '(at2g28510 : 132.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 104.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 264.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06249_456519-461093' '(at3g47500 : 267.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 123.0) no description available & (p38564|mnb1a_maize : 97.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 534.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06570_81552-84877' '(at1g28310 : 120.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06793_770279-773169' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 226.0) & (original description: Putative Dof7, Description = Dof protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf07405_188386-191632' '(at2g37590 : 150.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 300.0) & (original description: Putative DOF8, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf07508_724476-728589' '(at3g47500 : 233.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 96.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08002_91008-95392' '(at5g39660 : 246.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (p38564|mnb1a_maize : 97.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 492.0) & (original description: Putative CDF2, Description = Cyclic dof factor 2, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08211_285468-288136' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 113.0) no description available & (p38564|mnb1a_maize : 99.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08791_35996-38844' '(gnl|cdd|66392 : 110.0) no description available & (at5g62940 : 93.6) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 187.2) & (original description: Putative dag, Description = Dof protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08791_202800-206122' '(at1g28310 : 122.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf09321_53097-55765' '(at1g51700 : 118.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 99.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 236.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf13522_184221-187362' '(at5g02460 : 133.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 97.1) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 266.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf13533_174960-178867' '(at5g62940 : 156.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 113.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 312.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf14922_15547-19006' '(at3g61850 : 157.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 314.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T
'27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf15390_46298-48990' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold57_148029-154485' '(at4g24470 : 169.0) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 338.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF06203;PF00320;PF06200)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold8662_41080-44683' '(at5g25830 : 217.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold11049_38979-42363' '(at5g66320 : 206.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold13942_15878-18937' '(at3g60530 : 176.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative GATA4, Description = GATA transcription factor 4, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold20371_1-2373' '(at3g06740 : 82.8) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold22489_7373-14053' '(at3g21175 : 109.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold27170_9955-17603' '(at1g51600 : 122.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative ZIM, Description = GATA transcription factor 25, PFAM = PF06200;PF06203;PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold64664_5531-9972' '(at3g54810 : 137.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold76504_4261-7864' '(at3g60530 : 180.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold81096_1450-5045' '(at4g17570 : 99.4) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400023781, Description = GATA zinc finger containing protein-like protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold85452_1-4189' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold88014_1034-4265' '(at3g50870 : 149.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative GATA18, Description = GATA transcription factor 18, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold88081_69-3447' '(at5g25830 : 213.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold98360_1393-4241' '(at5g66320 : 188.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold50_42257-49281' '(at3g21175 : 144.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZIM2, Description = GATA transcription factor 24, PFAM = PF06203;PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold270_874569-877217' '(at3g06740 : 81.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative GNC, Description = GATA transcription factor 15, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold882_477288-480347' '(at3g60530 : 184.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative AGP3, Description = AG-motif binding protein-3, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1187_260476-264800' '(at1g08010 : 148.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1187_260530-265906' '(at1g08010 : 146.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaC08g43400D, Description = BnaC08g43400D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1341_249949-253204' '(at3g06740 : 94.4) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1848_307300-310531' '(at3g50870 : 130.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative GNC, Description = GATA transcription factor 18, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold2380_102786-106440' '(at3g24050 : 140.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold3022_4720-8412' '(at4g26150 : 86.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative GATA2, Description = GATA type zinc finger transcription factor family protein, putative, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold4403_115684-119663' '(at3g54810 : 136.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00000925ctg004_2830-5853' '(at3g06740 : 91.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00001449ctg013_8600-11796' '(at1g08010 : 151.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00003471ctg009_1-3734' '(at1g51600 : 104.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ZIM2, Description = GATA transcription factor 24, PFAM = PF06200;PF06203)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00015126ctg004_1-3163' '(at1g51600 : 113.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative ZIM, Description = GATA transcription factor 25, PFAM = PF06203;PF06200;PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00015779ctg022_1450-7066' '(at3g21175 : 166.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203;PF06200)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00036215ctg008_597-7527' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00049257ctg000_1-1347' '(at3g06740 : 96.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00053883ctg002_1-3577' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00094_240330-243759' '(at3g06740 : 103.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00397_119000-123538' '(at3g60530 : 175.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00428_1809858-1818806' '(at4g17570 : 379.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 758.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00839_477271-483924' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01105_151583-156241' '(at3g54810 : 133.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01126_342035-344658' '(at5g49300 : 90.5) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 16 (GATA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 15 (TAIR:AT3G06740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GATA16, Description = GATA transcription factor 16, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_64325-69307' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_74049-78164' '(at3g19184 : 136.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_89094-95404' '(at5g42700 : 115.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400025791, Description = B3 domain-containing protein, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01422_203265-208414' '(at1g08010 : 150.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01422_204438-208566' '(at1g08010 : 149.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01433_538674-542062' '(at5g66320 : 208.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01572_139516-143555' '(at3g54810 : 137.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative AGMBP, Description = AG-motif binding protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01611_151338-154902' '(at5g25830 : 216.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01922_251839-255893' '(at3g24050 : 140.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative GATA1, Description = GATA transcription factor 1, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_684546-729885' '(at4g24470 : 85.5) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 171.0) & (original description: Putative ZML1, Description = GATA transcription factor 28, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_722645-730057' '(at3g21175 : 182.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative GATA24, Description = GATA transcription factor 24, PFAM = PF06200;PF00320;PF06203)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_730266-736722' '(at4g24470 : 178.0) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 356.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06200;PF06203)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02294_104230-111938' '(at3g21175 : 121.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02294_118828-134210' '(at3g21175 : 238.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative GATA28, Description = GATA transcription factor 28, PFAM = PF06203;PF00320;PF06200)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02705_317248-325567' '(at4g17570 : 378.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 756.0) & (original description: Putative BnaA01g08480D, Description = BnaA01g08480D protein, PFAM = PF13919;PF16550;PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02842_23386-27254' '(at3g24050 : 144.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative AGP2, Description = AG-motif binding protein-2, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02887_23799-27673' '(at3g24050 : 142.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative AGP2, Description = AG-motif binding protein-2, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03614_70605-75879' '(at1g08010 : 141.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BnaC08g43400D, Description = BnaC08g43400D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03660_305491-308688' '(at3g50870 : 144.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative GATA18, Description = GATA transcription factor 18, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03852_21978-30326' '(at4g17570 : 424.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 848.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf04664_210833-213892' '(at5g66320 : 176.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf05444_26266-30647' '(at3g54810 : 136.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf05956_108163-116145' '(at4g17570 : 399.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 798.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf06045_21305-24997' '(at4g26150 : 84.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative GATA2, Description = GATA domain class transcription factor, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf06441_88439-92525' '(at4g32890 : 135.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 9 (GATA9); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 12 (TAIR:AT5G25830.1); Has 1477 Blast hits to 1442 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 587; Plants - 795; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative AGMBP, Description = AG-motif binding protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf07287_30172-33526' '(at3g50870 : 119.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaAnng31200D, Description = BnaAnng31200D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf08635_199833-203193' '(at3g60530 : 172.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf08782_256819-260245' '(at3g06740 : 91.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf09149_17805-21413' '(at4g17570 : 102.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400023781, Description = GATA zinc finger containing protein-like protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf09363_109838-114622' '(at5g25830 : 201.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BnaC01g05510D, Description = BnaC01g05510D protein, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf12928_146945-151031' '(at5g42700 : 191.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At5g42700, Description = B3 domain-containing protein At5g42700, PFAM = PF02362)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf14310_52990-59269' '(at3g21175 : 126.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf14310_63079-69759' '(at3g21175 : 149.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative GATA28, Description = GATA transcription factor 28, PFAM = PF06203;PF06200;PF00320)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf15496_278151-285043' '(at4g17570 : 402.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 804.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T
'27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf16530_16447-26754' '(at4g17570 : 404.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 808.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF13919;PF00320)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold5743_41250-50117' '(gnl|cdd|68268 : 188.0) no description available & (at2g26580 : 162.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q7xim7|yab1_orysa : 125.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold8110_7502-15089' '(at1g69180 : 159.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 131.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 116.0) no description available & (reliability: 318.0) & (original description: Putative CRC, Description = CRABS CLAW protein, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold8110_11061-15267' '(at1g69180 : 190.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 169.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 147.0) no description available & (reliability: 380.0) & (original description: Putative crc, Description = Crabs claw, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold57513_731-6575' '(at2g26580 : 181.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 151.0) no description available & (q7xim7|yab1_orysa : 119.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 362.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold1854_5184-12365' '(gnl|cdd|68268 : 169.0) no description available & (at1g08465 : 157.0) Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs; YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7xim7|yab1_orysa : 133.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 314.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold2364_92358-101299' '(at2g26580 : 191.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 161.0) no description available & (q7xim7|yab1_orysa : 128.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold7608_17617-25204' '(at1g69180 : 159.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 129.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 115.0) no description available & (reliability: 318.0) & (original description: Putative crc, Description = CRABS CLAW protein, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00005843ctg001_627-5810' '(at2g26580 : 215.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 177.0) no description available & (q7xim7|yab1_orysa : 139.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00024966ctg000_2310-9805' '(at2g26580 : 230.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 184.0) no description available & (q7xim7|yab1_orysa : 141.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 460.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00031863ctg002_3192-7828' '(at1g23420 : 192.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 173.0) no description available & (q7xim7|yab1_orysa : 113.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative YAB4, Description = Axial regulator YABBY 4, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00039845ctg011_362-3517' '(at1g23420 : 190.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 176.0) no description available & (q7xim7|yab1_orysa : 117.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf00970_66704-76981' '(gnl|cdd|68268 : 182.0) no description available & (at2g26580 : 164.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q7xim7|yab1_orysa : 126.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf02112_193685-205829' '(at2g26580 : 211.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 180.0) no description available & (q7xim7|yab1_orysa : 138.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 422.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf03737_124951-134280' '(at2g26580 : 197.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 159.0) no description available & (q7xim7|yab1_orysa : 129.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 394.0) & (original description: Putative YAB5, Description = YABBY5-like protein, PFAM = PF04690;PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf04287_469930-473908' '(at1g23420 : 189.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 175.0) no description available & (q7xim7|yab1_orysa : 115.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative YAB7, Description = Protein YABBY 7, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf18484_211805-230236' '(at1g08465 : 203.0) Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs; YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68268 : 198.0) no description available & (q7xim7|yab1_orysa : 158.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T
'27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf25485_53248-58546' '(at1g69180 : 179.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 159.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 130.0) no description available & (reliability: 358.0) & (original description: Putative CRC1, Description = Crabs claw, PFAM = PF04690;PF04690)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold1639_125-3345' '(at4g35280 : 197.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold1856_9076-11858' '(at2g41940 : 130.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative ZFP8, Description = Zinc finger protein 8, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold3931_65454-68441' '(at1g34790 : 313.0) Encodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development.; transparent testa 1 (TT1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 15538 Blast hits to 10276 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 14379; Fungi - 110; Plants - 685; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative TT1, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold4918_52694-55425' '(at1g66140 : 135.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold6521_42940-54290' '(at1g30970 : 220.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|38104 : 122.0) no description available & (reliability: 440.0) & (original description: Putative SUF4, Description = C2H2-type zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold9684_43222-46160' '(at5g04390 : 147.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative EPF1, Description = DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold12126_2830-38684' '(at2g01540 : 209.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 3447 Blast hits to 2959 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 600; Plants - 764; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|36248 : 195.0) no description available & (gnl|cdd|84577 : 80.8) no description available & (reliability: 386.0) & (original description: Putative CAR7, Description = Protein C2-DOMAIN ABA-RELATED 7, PFAM = PF00168)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold17726_8538-12837' '(at5g54630 : 129.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold19108_31890-34711' '(at1g02040 : 108.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At1g02040, Description = PEThy, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold19709_28017-31054' '(at2g28200 : 141.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative C2H2L6, Description = C2H2L domain class transcription factor, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold21321_17748-28611' '(at4g21160 : 476.0) ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ZAC; FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13 (TAIR:AT4G05330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36248 : 193.0) no description available & (gnl|cdd|85433 : 145.0) no description available & (reliability: 952.0) & (original description: Putative AGD12, Description = ADP-ribosylation factor GTPase-activating protein AGD12, PFAM = PF01412;PF00168)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold22377_3374-7703' '(at5g66350 : 194.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 180.0) no description available & (reliability: 380.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold22797_1-2553' '(at2g28200 : 142.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (q42430|zfp1_wheat : 80.5) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 284.0) & (original description: Putative ZFP6, Description = C2H2-type zinc finger protein 6, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold25246_24167-27555' '(at1g75520 : 166.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 162.0) no description available & (reliability: 332.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold26608_16496-27103' '(at1g43850 : 458.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold28094_3099-7188' '(at5g03150 : 317.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative NUC, Description = Zinc finger protein NUTCRACKER, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold29554_12821-15264' '(at2g37430 : 105.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZFP4, Description = C2H2-type zinc finger protein 4, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold29554_12833-15261' '(at3g53600 : 89.4) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative zct1, Description = Zinc finger protein ZAT11, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold30928_8528-11748' '(at4g35280 : 197.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative DAZ2, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32151_5466-9996' '(at3g57670 : 378.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32470_16556-25249' '(at2g47850 : 369.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 346.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 680.0) & (original description: Putative Os01g0258700, Description = Zinc finger CCCH domain-containing protein 6, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32782_1-2728' '(at1g26610 : 141.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative ZFP4, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold35057_4402-10124' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold37692_16033-19670' '(at1g26610 : 129.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold43325_12167-16457' '(at2g01940 : 363.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative SGR5, Description = Protein SHOOT GRAVITROPISM 5, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44052_12383-17349' '(at3g13810 : 313.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 626.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44626_4292-17050' '(at2g02070 : 282.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44998_434-15459' '(at2g27100 : 596.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 340.0) no description available & (reliability: 1192.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF04959;PF12066)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold47578_8942-12425' '(at1g13290 : 318.0) Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development.; DEFECTIVELY ORGANIZED TRIBUTARIES 5 (DOT5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G57670.1); Has 7460 Blast hits to 6100 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 6553; Fungi - 59; Plants - 690; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold48088_3540-6781' '(at5g04390 : 133.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative EPF1, Description = C2H2-type zinc finger family protein, putative, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold49267_2490-6299' '(at3g45260 : 298.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative IDD4, Description = Protein indeterminate-domain 4, chloroplastic, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold50135_3470-8815' '(at5g66350 : 208.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 398.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold62127_2920-11321' '(at1g43850 : 564.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold63800_7415-10407' '(at3g14740 : 305.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 182.0) no description available & (gnl|cdd|34742 : 148.0) no description available & (reliability: 610.0) & (original description: Putative BnaC05g38850D, Description = BnaC05g38850D protein, PFAM = PF00628;PF13832)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold63979_5484-8551' '(at5g04390 : 157.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative glysoja_008251, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold68345_5784-9510' '(gnl|cdd|68707 : 197.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold77102_213-2597' '(at3g28210 : 156.0) Encodes a putative zinc finger protein (PMZ).; PMZ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT2G41835.1); Has 518 Blast hits to 511 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 120; Plants - 80; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38393 : 125.0) no description available & (reliability: 312.0) & (original description: Putative SAP12, Description = Zinc finger AN1 domain-containing stress-associated protein 12, PFAM = PF01428;PF01428)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold77729_3731-6438' '(at3g23130 : 91.7) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative SUP, Description = Superman, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold78059_4088-7550' '(at5g66730 : 289.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold78275_700-4769' '(at1g55110 : 318.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold82210_600-5398' '(at1g75710 : 285.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold88653_632-5259' '(at3g51060 : 193.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 386.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold91200_2111-5248' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 190.0) no description available & (reliability: 412.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold94084_1486-4421' '(at4g35280 : 164.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold97774_1-4162' '(at1g03840 : 285.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold98572_2298-4216' '(at3g02790 : 112.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G16470.1); Has 86 Blast hits to 86 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At5g16470, Description = At5g16470, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold83_311729-369573' '(at2g37430 : 97.1) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative zct1, Description = Zinc finger protein ZAT11, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold133_304913-309475' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold341_6778-10467' '(gnl|cdd|68707 : 185.0) no description available & (at3g51060 : 181.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142;PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1076_149717-153062' '(gnl|cdd|68707 : 161.0) no description available & (at5g66350 : 157.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1375_225741-229039' '(at5g52010 : 454.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G12240.1); Has 70 Blast hits to 70 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 65; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At5g52010, Description = AT5g52010/MSG15_9, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1412_438929-441738' '(at1g27730 : 118.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1563_7947-12572' '(at1g72050 : 277.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF00096;PF00096;PF00096;PF12874)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1703_208059-212313' '(at5g66730 : 273.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2144_351967-355386' '(at3g51060 : 213.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 193.0) no description available & (reliability: 426.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2147_204903-208033' '(at1g34370 : 241.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative C2H35, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2426_129619-137406' '(at4g31420 : 392.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 275.0) no description available & (reliability: 784.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2603_51361-58671' '(gnl|cdd|68707 : 164.0) no description available & (at1g75520 : 156.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold3214_219388-258324' '(at2g37430 : 106.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP4, Description = C2H2-type zinc finger protein 4, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold3568_165401-168642' '(at5g04390 : 133.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative EPF1, Description = C2H2-type zinc finger family protein, putative, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4171_191216-193677' '(at4g35280 : 160.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative DAZ1, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4231_359169-362785' '(at3g14740 : 307.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 174.0) no description available & (gnl|cdd|34742 : 145.0) no description available & (reliability: 614.0) & (original description: Putative BnaA05g24820D, Description = BnaA05g24820D protein, PFAM = PF13832;PF00628)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4542_7536-10243' '(at3g23130 : 91.7) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative SUP, Description = Transcriptional regulator SUPERMAN, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5058_20454-22939' '(at2g28710 : 117.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5058_20805-22945' '(at2g28710 : 127.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5970_44229-53880' '(at5g20220 : 412.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 3073 Blast hits to 2296 proteins in 256 species: Archae - 0; Bacteria - 10; Metazoa - 639; Fungi - 640; Plants - 331; Viruses - 1155; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative BnaA10g15210D, Description = BnaA10g15210D protein, PFAM = PF00098)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold6181_34923-54861' '(at1g43850 : 488.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold7887_6079-10525' '(at1g68480 : 124.0) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development.; JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative JAG, Description = Zinc finger protein JAGGED, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold8033_37731-49920' '(at2g23740 : 1299.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (gnl|cdd|36298 : 174.0) no description available & (gnl|cdd|85073 : 131.0) no description available & (reliability: 2598.0) & (original description: Putative SUVR5, Description = Histone-lysine N-methyltransferase SUVR5, PFAM = PF05033;PF00856)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold9022_896-4143' '(at2g02080 : 253.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IDD4, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00000550ctg009_1-2386' '(at1g27730 : 171.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 342.0) & (original description: Putative AZF3, Description = Zinc finger protein AZF3, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00000711ctg007_3838-6269' '(at2g28710 : 105.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001096ctg028_25353-29915' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001423ctg008_14101-18400' '(at1g75710 : 276.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001815ctg005_9836-15758' '(at3g07940 : 468.0) Calcium-dependent ARF-type GTPase activating protein family; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 9376 Blast hits to 8361 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 5295; Fungi - 1386; Plants - 1701; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|36248 : 187.0) no description available & (gnl|cdd|85433 : 135.0) no description available & (reliability: 936.0) & (original description: Putative AGD11, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD11, PFAM = PF01412;PF00168)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00003916ctg010_921-4870' '(at1g55110 : 306.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00005938ctg010_4179-6793' '(at5g06070 : 80.9) Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.; RABBIT EARS (RBE); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00006054ctg001_475-4774' '(at5g66730 : 291.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00006248ctg002_2070-6387' '(at5g66730 : 278.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00007956ctg009_328-3383' '(at2g37740 : 97.4) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00008252ctg008_32613-37200' '(at1g08290 : 334.0) WIP domain protein 3 (WIP3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 40394 Blast hits to 17903 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 38493; Fungi - 119; Plants - 685; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (reliability: 668.0) & (original description: Putative WIP3, Description = Zinc finger protein WIP3, PFAM = PF12874)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00008615ctg001_64959-68009' '(at1g34370 : 224.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative C2H35, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00009719ctg005_3033-6022' '(at1g02030 : 94.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400004763, Description = C2H2-like zinc finger protein, putative, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00011335ctg004_13705-24184' '(at1g43850 : 473.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00012545ctg009_117-3564' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 204.0) no description available & (reliability: 420.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00012684ctg002_1218-4106' '(at5g25160 : 81.3) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 3 (ZFP3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: shoot apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400022777, Description = Zinc finger family protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00013428ctg001_7525-10443' '(gnl|cdd|68707 : 198.0) no description available & (at3g51060 : 186.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00013563ctg004_1827-5574' '(at5g54630 : 459.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014030ctg030_3788-10885' '(gnl|cdd|68707 : 102.0) no description available & (at5g66350 : 89.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014088ctg010_3115-5559' '(at2g37430 : 106.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014918ctg012_3276-5731' '(at5g57520 : 82.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 2 (ZFP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1032 Blast hits to 1032 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1032; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ZFP2, Description = Zinc finger protein 2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00015388ctg016_7755-10604' '(gnl|cdd|68707 : 209.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative SRS5, Description = Protein SHI RELATED SEQUENCE 5, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00015595ctg016_4062-8215' '(at3g57670 : 380.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative WIP5, Description = Zinc finger protein WIP5, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00017501ctg006_4273-7258' '(at1g27730 : 157.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 101.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 314.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00017572ctg022_1-4415' '(at2g01940 : 261.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BnaA09g54430D, Description = BnaA09g54430D protein, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00021234ctg001_3574-6405' '(at3g60580 : 153.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative ZAT9, Description = Zinc finger protein ZAT9, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00029762ctg002_4781-7434' '(at1g68360 : 144.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative Gl-3, Description = Multicellular trichome development C2H2 zinc finger transcription factor, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00032930ctg009_224-3156' '(at2g28200 : 135.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00037501ctg003_5291-8652' '(at2g45120 : 94.4) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 2765 Blast hits to 2574 proteins in 176 species: Archae - 0; Bacteria - 8; Metazoa - 1573; Fungi - 69; Plants - 926; Viruses - 18; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400024550, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00039328ctg002_15905-21139' '(at3g57670 : 329.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00047135ctg001_351-2467' '(at5g54630 : 176.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative mrpi1, Description = C2H2 zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00047378ctg000_459-15433' '(at2g27100 : 618.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 343.0) no description available & (reliability: 1236.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF12066;PF04959)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00050140ctg000_1-2245' '(at1g27730 : 157.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 112.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 314.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00054677ctg002_12663-17629' '(at3g13810 : 292.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 584.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00057002ctg001_8115-15762' '(at4g25610 : 305.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative M7J2.20, Description = Putative uncharacterized protein M7J2.20, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00059466ctg000_955-6722' '(at1g03840 : 324.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative IDD2, Description = Protein indeterminate-domain 2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00059850ctg000_4904-9718' '(at5g14140 : 274.0) zinc ion binding;nucleic acid binding;zinc ion binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); Has 287 Blast hits to 281 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 82; Plants - 70; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39375 : 193.0) no description available & (reliability: 548.0) & (original description: Putative BnaC03g06280D, Description = BnaC03g06280D protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101ctg15635_1-2044' '(at2g28710 : 106.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP3, Description = C2H2-type zinc finger protein 3, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101ctg16285_4336-7076' '(at1g66140 : 152.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative ZFP1, Description = Zinc finger protein 4, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00052_408432-411559' '(at1g34370 : 224.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative Os02g0572900, Description = Os02g0572900 protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00080_663501-666259' '(at1g27730 : 160.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 320.0) & (original description: Putative zct3, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00109_1038753-1047315' '(at5g14140 : 275.0) zinc ion binding;nucleic acid binding;zinc ion binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); Has 287 Blast hits to 281 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 82; Plants - 70; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39375 : 194.0) no description available & (reliability: 550.0) & (original description: Putative BnaC03g06280D, Description = BnaC03g06280D protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00158_710564-715909' '(at5g66350 : 204.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 398.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00176_487068-490719' '(at5g54630 : 456.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00307_323162-338731' '(at3g18290 : 1533.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|37151 : 276.0) no description available & (gnl|cdd|69040 : 90.0) no description available & (reliability: 3066.0) & (original description: Putative TARF, Description = TMV-associated RING finger protein, PFAM = PF01814;PF01814;PF01814;PF05495;PF13639;PF14599)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00317_456319-459617' '(at1g02040 : 80.1) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative BnaA10g00100D, Description = PEThy, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00369_81833-87677' '(at3g50700 : 270.0) zinc finger protein, similar to maize Indeterminate1 (ID1); indeterminate(ID)-domain 2 (IDD2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 54862 Blast hits to 20312 proteins in 388 species: Archae - 0; Bacteria - 661; Metazoa - 50262; Fungi - 473; Plants - 881; Viruses - 5; Other Eukaryotes - 2580 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative IDD2, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00383_15280-18793' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 202.0) no description available & (reliability: 420.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00436_629028-632065' '(at2g28200 : 149.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00436_778336-781550' '(at5g22890 : 311.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G34370.1); Has 32454 Blast hits to 15503 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 30756; Fungi - 38; Plants - 696; Viruses - 0; Other Eukaryotes - 964 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative BnaC09g36180D, Description = BnaC09g36180D protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00457_569873-572772' '(at5g03510 : 144.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1636 Blast hits to 1504 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 699; Fungi - 0; Plants - 911; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZFP6, Description = C2H2-type zinc finger protein 6, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00482_1246624-1250433' '(at3g45260 : 274.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00494_840682-843419' '(at1g66140 : 129.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00505_124997-134437' '(at2g47850 : 377.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 355.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 109.0) no description available & (reliability: 706.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00509_32737-85415' '(at3g45260 : 322.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00509_34608-86140' '(at3g45260 : 320.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative IDD9, Description = Protein indeterminate-domain 9, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00595_321249-327937' '(at4g25610 : 318.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative M7J2.20, Description = Putative uncharacterized protein M7J2.20, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00611_518925-524552' '(at2g19385 : 209.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2, LYAR-type (InterPro:IPR014898); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 578 Blast hits to 525 proteins in 182 species: Archae - 0; Bacteria - 8; Metazoa - 240; Fungi - 111; Plants - 79; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|37397 : 90.5) no description available & (reliability: 418.0) & (original description: Putative At2g19385, Description = At2g19385, PFAM = PF12874;PF08790)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00662_415857-418522' '(at1g27730 : 174.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 348.0) & (original description: Putative ZAT10, Description = Zinc finger protein ZAT10, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00730_49059-51895' '(at2g29660 : 84.3) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 407 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00858_36366-40370' '(at5g54630 : 487.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00872_287495-290903' '(at1g13290 : 317.0) Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development.; DEFECTIVELY ORGANIZED TRIBUTARIES 5 (DOT5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G57670.1); Has 7460 Blast hits to 6100 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 6553; Fungi - 59; Plants - 690; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00984_793248-795994' '(at1g66140 : 153.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01025_1381314-1390275' '(gnl|cdd|68707 : 155.0) no description available & (at1g19790 : 145.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 7 (SRS7); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative SHI, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01025_1385992-1389386' '(gnl|cdd|68707 : 155.0) no description available & (at1g75520 : 150.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01070_551924-555114' '(at4g35280 : 194.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative DAZ2, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01189_265492-277965' '(at2g23740 : 1328.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|85073 : 128.0) no description available & (reliability: 2656.0) & (original description: Putative SUVR5, Description = Histone-lysine N-methyltransferase SUVR5, PFAM = PF00856;PF05033)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01190_65222-68338' '(gnl|cdd|68707 : 162.0) no description available & (at5g66350 : 152.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01241_793996-800209' '(at2g02070 : 291.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01295_560782-571093' '(at5g18550 : 335.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 331.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 106.0) no description available & (reliability: 670.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01365_792110-795043' '(at1g34370 : 457.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative STOP1, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01371_763658-769198' '(at5g66730 : 354.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative C2H2L9, Description = C2H2L domain class transcription factor, PFAM = PF00096;PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01379_62132-65328' '(at5g22890 : 294.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G34370.1); Has 32454 Blast hits to 15503 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 30756; Fungi - 38; Plants - 696; Viruses - 0; Other Eukaryotes - 964 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative BnaC09g36180D, Description = BnaC09g36180D protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01447_151471-154223' '(at1g80730 : 102.0) Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation.; zinc-finger protein 1 (ZFP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: photomorphogenesis; LOCATED IN: intracellular; EXPRESSED IN: inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1054 Blast hits to 1054 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1051; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ZFP2, Description = Zinc finger protein, putative, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01455_211784-228310' '(at5g22480 : 694.0) ZPR1 zinc-finger domain protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, ZPR1-type (InterPro:IPR004457); BEST Arabidopsis thaliana protein match is: ZPR1 zinc-finger domain protein (TAIR:AT5G37340.3); Has 1143 Blast hits to 605 proteins in 280 species: Archae - 310; Bacteria - 0; Metazoa - 225; Fungi - 282; Plants - 53; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|37914 : 531.0) no description available & (gnl|cdd|47978 : 201.0) no description available & (reliability: 1388.0) & (original description: Putative zpr1, Description = Zinc finger protein ZPR1, PFAM = PF03367;PF03367)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01481_390446-393513' '(at5g04390 : 159.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG402031064, Description = PEThy, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01495_14285-16745' '(at2g37430 : 97.8) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative zfp2, Description = C2H2-type zinc finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01521_576410-579996' '(at1g26610 : 157.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400007715, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01582_891772-898493' '(at1g57820 : 802.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 203.0) no description available & (reliability: 1462.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182;PF00628;PF13445;PF13920)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01639_774812-781261' '(at1g03840 : 325.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01653_15487-18314' '(at2g37740 : 95.1) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01694_1088655-1091770' '(at2g29660 : 320.0) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 407 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01721_1071646-1081654' '(at4g31420 : 438.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 323.0) no description available & (reliability: 876.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01749_229834-234741' '(at3g57670 : 375.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative WIP5, Description = Zinc finger protein WIP5, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01795_1252952-1260589' '(at1g43850 : 291.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01826_239936-246081' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01998_777379-781941' '(at1g03840 : 328.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02042_365543-371933' '(at1g03840 : 282.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02062_1017115-1021942' '(at3g57670 : 372.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02191_229224-232444' '(at4g35280 : 198.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02268_1025908-1029038' '(at1g34370 : 243.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BnaA02g06050D, Description = BnaA02g06050D protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02499_243323-245640' '(at3g02790 : 110.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G16470.1); Has 86 Blast hits to 86 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative At5g16470, Description = At5g16470, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02537_1069352-1072351' '(at1g34790 : 306.0) Encodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development.; transparent testa 1 (TT1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 15538 Blast hits to 10276 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 14379; Fungi - 110; Plants - 685; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02549_205194-224236' '(at2g02080 : 296.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative BnaA06g34340D, Description = BnaA06g34340D protein, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02583_524202-527023' '(at2g37740 : 97.4) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02785_204686-209678' '(at1g08290 : 328.0) WIP domain protein 3 (WIP3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 40394 Blast hits to 17903 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 38493; Fungi - 119; Plants - 685; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative WIP3, Description = Zinc finger protein WIP3, PFAM = PF12874)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02793_834260-837042' '(at2g41940 : 134.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative ZFP8, Description = Zinc finger protein 8, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02801_1510-6996' '(at1g75710 : 437.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02831_692982-697051' '(at1g55110 : 296.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02868_527174-534186' '(at4g31420 : 441.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 323.0) no description available & (reliability: 882.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02911_305190-310108' '(at2g01940 : 263.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaC06g26120D, Description = BnaC06g26120D protein, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02995_242475-245218' '(at1g66140 : 135.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03203_1079653-1091158' '(at5g06070 : 80.9) Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.; RABBIT EARS (RBE); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03282_854811-900088' '(at4g21160 : 474.0) ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ZAC; FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13 (TAIR:AT4G05330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|85433 : 145.0) no description available & (reliability: 948.0) & (original description: Putative AGD12, Description = ADP-ribosylation factor GTPase-activating protein AGD12, PFAM = PF00168;PF01412)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03332_427307-431837' '(at3g57670 : 367.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03548_180841-186719' '(at1g57820 : 654.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 194.0) no description available & (reliability: 1180.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03565_132668-147232' '(at4g25610 : 321.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 642.0) & (original description: Putative At4g25610, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03565_135654-147206' '(at4g25610 : 80.9) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400015791, Description = , PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03607_312157-321596' '(at1g30970 : 290.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|38104 : 141.0) no description available & (reliability: 580.0) & (original description: Putative SUF4, Description = Protein SUPPRESSOR OF FRI 4, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03693_746923-751542' '(at5g66730 : 360.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04124_275531-278526' '(at3g60580 : 146.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative ZAT9, Description = Zinc finger protein ZAT9, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04173_261893-266352' '(at1g03840 : 414.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative MGP, Description = Zinc finger protein MAGPIE, PFAM = PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04230_49458-52534' '(at4g12240 : 398.0) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G52010.1); Has 77 Blast hits to 77 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative BnaA03g25040D, Description = BnaA03g25040D protein, PFAM = PF01936)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04267_160940-165081' '(at1g72050 : 268.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF00096;PF00096;PF12874)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04300_70659-78729' '(at3g07940 : 489.0) Calcium-dependent ARF-type GTPase activating protein family; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 9376 Blast hits to 8361 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 5295; Fungi - 1386; Plants - 1701; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|36248 : 188.0) no description available & (gnl|cdd|85433 : 136.0) no description available & (reliability: 978.0) & (original description: Putative AGD11, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD11, PFAM = PF01412;PF00168)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04371_196511-201072' '(at5g04390 : 148.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04400_221959-225596' '(at1g26610 : 169.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04558_171741-190440' '(at2g27100 : 618.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 345.0) no description available & (reliability: 1236.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF04959;PF12066)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04664_539797-543139' '(gnl|cdd|68707 : 166.0) no description available & (at1g75520 : 147.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04741_201316-204308' '(at3g14740 : 301.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 182.0) no description available & (gnl|cdd|34742 : 148.0) no description available & (reliability: 602.0) & (original description: Putative BnaA05g24810D, Description = BnaA05g24810D protein, PFAM = PF13832;PF00628)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04953_522367-526807' '(at5g03150 : 293.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative JKD, Description = Zinc finger protein JACKDAW, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05373_1328-3828' '(at2g37430 : 121.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative zct1, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05373_142392-144898' '(at2g28710 : 123.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05378_26472-33227' '(at1g30970 : 110.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative SUF4, Description = Protein SUPPRESSOR OF FRI 4, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05554_941651-946844' '(at1g75710 : 283.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06064_158111-162798' '(at2g01940 : 340.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative IDD14, Description = Protein indeterminate-domain 14, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06091_106861-109685' '(at5g25160 : 120.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 3 (ZFP3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: shoot apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ZFP3, Description = Zinc finger protein 3, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06153_315464-318293' '(at4g17810 : 107.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 1054 Blast hits to 1054 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1054; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PALM1, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06280_583460-586593' '(at3g28210 : 144.0) Encodes a putative zinc finger protein (PMZ).; PMZ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT2G41835.1); Has 518 Blast hits to 511 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 120; Plants - 80; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38393 : 112.0) no description available & (reliability: 288.0) & (original description: Putative SAP12, Description = Zinc finger AN1 domain-containing stress-associated protein 12, PFAM = PF01428)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06397_528273-532340' '(at5g03150 : 317.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06467_94241-96999' '(at1g27730 : 164.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 107.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 328.0) & (original description: Putative zct3, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06662_77939-80928' '(at1g02030 : 100.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400004763, Description = C2H2-type zinc-finger protein, putative, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06687_8757-13058' '(at2g01940 : 375.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative SGR5, Description = Protein SHOOT GRAVITROPISM 5, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06799_143345-146373' '(at2g28200 : 138.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative EPF1, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07000_13695-18475' '(at3g57670 : 327.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07474_36027-56329' '(at1g43850 : 489.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07591_98570-111745' '(at3g18290 : 1575.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|37151 : 276.0) no description available & (gnl|cdd|69040 : 88.5) no description available & (reliability: 3150.0) & (original description: Putative BTS, Description = AT3g18290/MIE15_8, PFAM = PF14599;PF01814;PF01814;PF01814;PF05495)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07693_14148-17548' '(at1g02040 : 105.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZPT4-1, Description = Cys2/His2 zinc-finger transcription factor, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07785_114386-117405' '(at2g45120 : 103.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 2765 Blast hits to 2574 proteins in 176 species: Archae - 0; Bacteria - 8; Metazoa - 1573; Fungi - 69; Plants - 926; Viruses - 18; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PEThy, Description = C2H2 zinc-finger protein ZPT2-10, PFAM = PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08001_50196-53014' '(at1g27730 : 148.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 89.4) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 296.0) & (original description: Putative ZAT10, Description = Zinc finger protein ZAT10, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08011_162490-165788' '(at5g52010 : 454.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G12240.1); Has 70 Blast hits to 70 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 65; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At5g52010, Description = AT5g52010/MSG15_9, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08273_614611-618852' '(at3g51060 : 174.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 164.0) no description available & (reliability: 348.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08719_26933-29260' '(at2g28710 : 100.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ZFP2, Description = Zinc finger, C2H2, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08721_13765-17048' '(at1g26610 : 144.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZFP4, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08892_1821-23178' '(at1g70810 : 213.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|84577 : 80.4) no description available & (reliability: 386.0) & (original description: Putative CAR10, Description = Protein C2-DOMAIN ABA-RELATED 10, PFAM = PF00168)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09063_29224-37201' '(at1g43850 : 282.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09107_280644-284167' '(at1g26610 : 185.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-3, PFAM = PF13912;PF13912;PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09644_46159-52235' '(at5g20220 : 420.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 3073 Blast hits to 2296 proteins in 256 species: Archae - 0; Bacteria - 10; Metazoa - 639; Fungi - 640; Plants - 331; Viruses - 1155; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative BnaA10g15210D, Description = BnaA10g15210D protein, PFAM = PF00098)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_239241-250964' '(at2g37430 : 117.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ZAT7, Description = Zinc finger protein ZAT7, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_246155-248661' '(at2g28710 : 121.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_336895-339398' '(at2g37430 : 122.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative ZFP2, Description = Cys2/His2-type zinc finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf11182_290372-294838' '(at1g68480 : 112.0) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development.; JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative JAG, Description = Zinc finger, C2H2, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf11689_264986-269813' '(at1g72050 : 343.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF12874;PF00096;PF00096;PF00096)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf12639_5028-13231' '(at5g18550 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 341.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 704.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf13137_72253-77831' '(at3g42860 : 181.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, GRF-type (InterPro:IPR010666), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 49068 Blast hits to 18471 proteins in 427 species: Archae - 0; Bacteria - 1; Metazoa - 1577; Fungi - 900; Plants - 1276; Viruses - 44658; Other Eukaryotes - 656 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative PGSC0003DMG400027518, Description = DNA topoisomerase, PFAM = PF06839;PF06839;PF00098;PF00098;PF00098)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf16127_8294-16196' '(at2g47850 : 331.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 300.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 101.0) no description available & (reliability: 596.0) & (original description: Putative Os01g0257400, Description = Zinc finger CCCH domain-containing protein 5, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf17237_102891-105700' '(at1g27730 : 158.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 117.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 316.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf17597_195066-197987' '(at3g23130 : 92.0) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative SUP, Description = Transcriptional regulator SUPERMAN, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf18731_7250-9789' '(at3g53600 : 125.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative ZAT12, Description = Zinc finger protein ZAT12, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf18731_7262-9783' '(at3g53600 : 106.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative zct1, Description = C2H2-type zinc finger protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf21969_490-3773' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 191.0) no description available & (reliability: 412.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf24149_13152-15823' '(at1g68360 : 173.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative Gl-3, Description = Multicellular trichome development C2H2 zinc finger transcription factor, PFAM = )' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf24149_35761-38414' '(at1g68360 : 162.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative ZFP6, Description = Zinc finger protein 6, PFAM = PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf26762_20975-24216' '(at5g04390 : 134.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaCnng71010D, Description = BnaCnng71010D protein, PFAM = PF13912;PF13912)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf38401_9118-14079' '(at3g13810 : 316.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 632.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf38401_9124-14034' '(at3g13810 : 315.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 630.0) & (original description: Putative BnaC01g37430D, Description = BnaC01g37430D protein, PFAM = PF12171)' T
'27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf39284_11612-14067' '(at5g57520 : 80.9) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 2 (ZFP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1032 Blast hits to 1032 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1032; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative ZFP2, Description = Zinc finger protein 2, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold2749_32744-42252' '(at4g25440 : 453.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 186.0) no description available & (gnl|cdd|29257 : 112.0) no description available & (reliability: 906.0) & (original description: Putative ZFWD1, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00400;PF00400;PF00400;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold4442_60430-68689' '(q9swf9|zfnl_pea : 320.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 296.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 106.0) no description available & (reliability: 592.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold18745_13769-19283' '(at3g12130 : 178.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative At3g12130, Description = Zinc finger CCCH domain-containing protein 36, PFAM = PF00642;PF00013)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold37874_10323-20476' '(at5g06770 : 154.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642;PF00642;PF14608;PF00013)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold43652_6653-9936' '(at1g03790 : 231.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|36808 : 228.0) no description available & (reliability: 462.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold43797_3855-10703' '(at4g38890 : 822.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 716.0) no description available & (gnl|cdd|73368 : 252.0) no description available & (reliability: 1644.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF00642;PF01207)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold50784_9653-13746' '(at2g40140 : 481.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 378.0) no description available & (reliability: 962.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold103195_405-3472' '(at2g19810 : 313.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 244.0) no description available & (reliability: 626.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold104069_530-3562' '(gnl|cdd|35348 : 143.0) no description available & (at3g47120 : 132.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative RBMX2, Description = RNA-binding motif protein, X-linked 2, PFAM = PF00076)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold99_813983-820112' '(at3g12130 : 242.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold213_1062921-1079072' '(q9swf9|zfnl_pea : 488.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 403.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 94.6) no description available & (reliability: 806.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein ZFN-like, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold2062_170746-173693' '(at5g07500 : 186.0) Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.; PEI1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT5G58620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 184.0) no description available & (reliability: 372.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold6198_1-2799' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 267.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold8405_1478-5565' '(at2g40140 : 494.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 371.0) no description available & (reliability: 988.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00002425ctg005_808-5188' '(at4g25440 : 340.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 150.0) no description available & (gnl|cdd|29257 : 92.0) no description available & (reliability: 680.0) & (original description: Putative DR14, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00642;PF00400;PF00400;PF00400)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00002898ctg000_7586-16151' '(at4g38890 : 822.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 727.0) no description available & (gnl|cdd|73368 : 258.0) no description available & (reliability: 1644.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF00642;PF01207)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00018227ctg005_947-6610' '(at3g12130 : 165.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative pco086234b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, PFAM = PF00642;PF00642;PF14608;PF00013)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00027217ctg012_1563-4618' '(at2g19810 : 325.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 264.0) no description available & (reliability: 650.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00029190ctg008_1132-7217' '(at5g43630 : 328.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative PGSC0003DMG400001126, Description = Plus-3, PFAM = PF03126)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00031093ctg008_2136-5222' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 275.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00047171ctg002_164-4395' '(at2g41900 : 659.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 380.0) no description available & (reliability: 1318.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642;PF12796)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00096_190787-196514' '(at5g06770 : 177.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF08352;PF08352;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00149_75426-85730' '(at5g01450 : 315.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.2); Has 1494 Blast hits to 1490 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 838; Fungi - 48; Plants - 298; Viruses - 88; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|39476 : 102.0) no description available & (reliability: 588.0) & (original description: Putative BnaA03g17640D, Description = BnaA03g17640D protein, PFAM = PF16041;PF13920;PF16040)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00282_90426-102397' '(at4g25440 : 442.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 145.0) no description available & (gnl|cdd|29257 : 114.0) no description available & (reliability: 884.0) & (original description: Putative ZFWD1, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00400;PF00400;PF00400;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00573_392401-396515' '(at5g58620 : 450.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G40140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 372.0) no description available & (reliability: 900.0) & (original description: Putative At5g58620, Description = Zinc finger CCCH domain-containing protein 66, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00662_69119-73238' '(at2g38185 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 244.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF13920;PF16041)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00735_329609-333814' '(at2g41900 : 648.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 385.0) no description available & (reliability: 1296.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00981_388487-392493' '(at3g19360 : 206.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaC01g33510D, Description = BnaC01g33510D protein, PFAM = PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01426_376550-379833' '(gnl|cdd|36808 : 227.0) no description available & (at1g03790 : 225.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01460_47227-51423' '(at1g68200 : 199.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01719_110914-117907' '(at5g43630 : 240.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative PGSC0003DMG400001126, Description = RNA polymerase-associated RTF1-like protein, PFAM = PF03126)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01927_821433-824613' '(at2g19810 : 298.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 245.0) no description available & (reliability: 596.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02286_137405-141744' '(at2g40140 : 477.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 382.0) no description available & (reliability: 954.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02700_54838-72737' '(at5g06770 : 148.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF14608;PF00013;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02793_2562654-2569563' '(at5g06770 : 182.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02798_512772-525694' '(q9swf9|zfnl_pea : 538.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 472.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 123.0) no description available & (reliability: 944.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02822_262945-285960' '(q9swf9|zfnl_pea : 528.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 444.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 113.0) no description available & (reliability: 888.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03035_251358-254641' '(at1g03790 : 243.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|36808 : 229.0) no description available & (reliability: 486.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03077_267379-273351' '(at2g38185 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 250.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF16041;PF13920)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03438_535444-539775' '(at2g41900 : 658.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 384.0) no description available & (reliability: 1316.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03824_77102-83648' '(at5g43630 : 256.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative PGSC0003DMG400001126, Description = Plus-3, PFAM = PF03126)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf04028_104479-107636' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 273.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF14608;PF14608)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06394_470212-473469' '(at1g66810 : 201.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G68200.1); Has 998 Blast hits to 914 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 425; Fungi - 99; Plants - 223; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At1g66810, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06661_355343-360870' '(at5g06770 : 183.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative Os04g0665700, Description = Zinc finger CCCH domain-containing protein 31, PFAM = PF00013;PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06865_17149-20096' '(at5g07500 : 186.0) Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.; PEI1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT5G58620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 186.0) no description available & (reliability: 372.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf07829_293861-299101' '(at3g19360 : 91.7) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative , Description = , PFAM = PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf08290_62690-65943' '(at2g19810 : 309.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 262.0) no description available & (reliability: 618.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf09133_138299-144063' '(at5g06770 : 176.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642;PF00642;PF00642;PF00013)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf10217_272535-276519' '(at3g19360 : 205.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative BnaC01g33510D, Description = BnaC01g33510D protein, PFAM = PF00642;PF00642;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf10919_198059-206729' '(at4g38890 : 842.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 730.0) no description available & (gnl|cdd|73368 : 259.0) no description available & (reliability: 1684.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF01207;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf11000_143719-147809' '(at2g41900 : 702.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 387.0) no description available & (reliability: 1404.0) & (original description: Putative At5g58620, Description = Zinc finger CCCH domain-containing protein 66, PFAM = PF00642;PF12796)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf11491_14289-30082' '(at3g47120 : 224.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (gnl|cdd|35348 : 203.0) no description available & (reliability: 448.0) & (original description: Putative CZF1, Description = CCCH-type zinc finger protein, PFAM = PF00076;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf13231_245629-249890' '(at2g41900 : 663.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 392.0) no description available & (reliability: 1326.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf13683_128724-138060' '(at3g12130 : 168.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative pco086234b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, PFAM = PF00642;PF00642;PF14608;PF00013)' T
'27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf18157_2764-6719' '(at1g68200 : 187.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'nbv0.3scaffold5813_57460-63220' '(at5g23090 : 201.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 155.0) no description available & (gnl|cdd|34751 : 95.5) no description available & (reliability: 402.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'nbv0.5scaffold6573_77998-92923' '(at1g72440 : 877.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37249 : 684.0) no description available & (gnl|cdd|35152 : 259.0) no description available & (reliability: 1754.0) & (original description: Putative Os09g0116400, Description = CCAAT-box-binding transcription factor-like protein, PFAM = PF03914)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf01764_218968-226864' '(at5g23090 : 217.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 167.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 434.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf02632_33692-38846' '(at5g23090 : 222.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 170.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 444.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf08407_99000-114077' '(at1g72440 : 872.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37249 : 718.0) no description available & (gnl|cdd|35152 : 251.0) no description available & (reliability: 1744.0) & (original description: Putative EDA25, Description = Protein SLOW WALKER2, PFAM = PF03914)' T
'27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf08442_48710-55118' '(at5g23090 : 221.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 168.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 442.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold804_75288-79624' '(at1g54160 : 119.0) Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought.; "nuclear factor Y, subunit A5" (NF-YA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: response to water deprivation, negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A6 (TAIR:AT3G14020.1); Has 683 Blast hits to 683 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 133; Plants - 381; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|36774 : 105.0) no description available & (gnl|cdd|47823 : 103.0) no description available & (reliability: 238.0) & (original description: Putative rapB, Description = RAPB protein, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold21021_20894-29039' '(at3g05690 : 140.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A2" (NF-YA2); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A10 (TAIR:AT5G06510.2); Has 655 Blast hits to 655 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 359; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47823 : 101.0) no description available & (gnl|cdd|36774 : 99.1) no description available & (reliability: 280.0) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold27125_1077-6136' '(at1g72830 : 133.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 108.0) no description available & (gnl|cdd|36774 : 104.0) no description available & (reliability: 266.0) & (original description: Putative umc1568, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold47193_3917-10776' '(at1g72830 : 128.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 108.0) no description available & (gnl|cdd|47823 : 101.0) no description available & (reliability: 256.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-3, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold68075_1-4976' '(at5g06510 : 131.0) "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 97.3) no description available & (gnl|cdd|36774 : 95.3) no description available & (reliability: 262.0) & (original description: Putative rapB, Description = CCAAT-binding factor, conserved site-containing protein, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.5scaffold2683_92529-99546' '(at5g12840 : 152.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 98.0) no description available & (gnl|cdd|47823 : 97.0) no description available & (reliability: 304.0) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.5scaffold7563_46671-55330' '(at1g30500 : 131.0) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|36774 : 89.9) no description available & (gnl|cdd|47823 : 88.9) no description available & (reliability: 262.0) & (original description: Putative NFYA7, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben044scf00022852ctg008_120-4577' '(at1g17590 : 129.0) "nuclear factor Y, subunit A8" (NF-YA8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A3 (TAIR:AT1G72830.1). & (gnl|cdd|36774 : 107.0) no description available & (gnl|cdd|47823 : 102.0) no description available & (reliability: 258.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-3, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00088_141693-150608' '(at1g30500 : 137.0) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|47823 : 98.9) no description available & (gnl|cdd|36774 : 97.2) no description available & (reliability: 274.0) & (original description: Putative NFYA7, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00781_769972-777469' '(gnl|cdd|36774 : 111.0) no description available & (gnl|cdd|47823 : 106.0) no description available & (at1g17590 : 97.1) "nuclear factor Y, subunit A8" (NF-YA8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A3 (TAIR:AT1G72830.1). & (reliability: 194.2) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00911_145875-151468' '(at5g06510 : 133.0) "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 96.6) no description available & (gnl|cdd|36774 : 94.5) no description available & (reliability: 266.0) & (original description: Putative rapB, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf02425_120515-125075' '(at3g14020 : 137.0) "nuclear factor Y, subunit A6" (NF-YA6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A5 (TAIR:AT1G54160.1); Has 683 Blast hits to 683 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 132; Plants - 380; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|36774 : 110.0) no description available & (gnl|cdd|47823 : 107.0) no description available & (reliability: 274.0) & (original description: Putative rapB, Description = RAPB protein, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf04323_393493-400950' '(at1g30500 : 91.3) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf04869_794681-799858' '(at5g12840 : 146.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 106.0) no description available & (gnl|cdd|47823 : 100.0) no description available & (reliability: 292.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf05694_66683-74828' '(at3g05690 : 122.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A2" (NF-YA2); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A10 (TAIR:AT5G06510.2); Has 655 Blast hits to 655 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 359; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47823 : 102.0) no description available & (gnl|cdd|36774 : 98.0) no description available & (reliability: 244.0) & (original description: Putative nf-YA, Description = YA1, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf09296_260802-282296' '(at1g72830 : 99.8) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 98.9) no description available & (gnl|cdd|36774 : 98.0) no description available & (reliability: 199.6) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf10191_196893-205997' '(at1g72830 : 129.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 108.0) no description available & (gnl|cdd|36774 : 104.0) no description available & (reliability: 258.0) & (original description: Putative umc1568, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf10498_132661-139860' '(at5g12840 : 159.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 99.0) no description available & (gnl|cdd|47823 : 97.7) no description available & (reliability: 318.0) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T
'27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf13231_57903-67226' '(gnl|cdd|36774 : 105.0) no description available & (gnl|cdd|47823 : 101.0) no description available & (at5g12840 : 96.7) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.3scaffold28783_515-3120' '(gnl|cdd|36087 : 179.0) no description available & (at4g14540 : 174.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 164.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 97.2) no description available & (reliability: 348.0) & (original description: Putative NFYA, Description = Nuclear transcription factor Y-alpha, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.3scaffold34434_655-4226' '(at2g37060 : 219.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36087 : 204.0) no description available & (p25209|nfyb_maize : 197.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 94.1) no description available & (reliability: 438.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.5scaffold1331_316286-321257' '(at5g47670 : 197.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|36087 : 187.0) no description available & (p25209|nfyb_maize : 147.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 394.0) & (original description: Putative l1l, Description = Leafy cotyledon 1-like protein, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.5scaffold8364_23192-26715' '(gnl|cdd|36087 : 185.0) no description available & (at4g14540 : 172.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 167.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 99.9) no description available & (reliability: 344.0) & (original description: Putative NFYB7, Description = Nuclear transcription factor Y subunit B-7, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben044scf00000396ctg001_1772-4759' '(gnl|cdd|36087 : 184.0) no description available & (at2g13570 : 170.0) "nuclear factor Y, subunit B7" (NF-YB7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1909 Blast hits to 1888 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 587; Fungi - 414; Plants - 527; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). & (p25209|nfyb_maize : 164.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 97.2) no description available & (reliability: 340.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben044scf00061291ctg000_1-1072' '(at4g14540 : 208.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 198.0) no description available & (q60eq4|nfyb3_orysa : 171.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 416.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf00341_280998-283543' '(at4g14540 : 199.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 193.0) no description available & (q60eq4|nfyb3_orysa : 167.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 91.8) no description available & (reliability: 398.0) & (original description: Putative BnaC01g35600D, Description = BnaC01g35600D protein, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf00919_129135-131740' '(gnl|cdd|36087 : 179.0) no description available & (at4g14540 : 174.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 163.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 96.4) no description available & (reliability: 348.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf01548_96029-98961' '(at4g14540 : 120.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 109.0) no description available & (q5qmg3|nfyb2_orysa : 95.9) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf01818_294246-304044' '(at3g53340 : 198.0) "nuclear factor Y, subunit B10" (NF-YB10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36087 : 197.0) no description available & (p25209|nfyb_maize : 183.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 93.7) no description available & (reliability: 396.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02042_219755-222237' '(gnl|cdd|36087 : 176.0) no description available & (at2g47810 : 166.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5qmg3|nfyb2_orysa : 149.0) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (gnl|cdd|64661 : 87.2) no description available & (reliability: 332.0) & (original description: Putative NFYB4, Description = Nuclear transcription factor Y subunit B-4, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02510_612672-618061' '(at2g27470 : 100.0) "nuclear factor Y, subunit B11" (NF-YB11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B1 (TAIR:AT2G38880.7); Has 148542 Blast hits to 60498 proteins in 2540 species: Archae - 708; Bacteria - 15552; Metazoa - 38569; Fungi - 16830; Plants - 7103; Viruses - 1761; Other Eukaryotes - 68019 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative glysoja_008179, Description = DNA polymerase epsilon subunit 3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02752_1496710-1499105' '(gnl|cdd|36087 : 169.0) no description available & (at2g47810 : 160.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p25209|nfyb_maize : 136.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 84.5) no description available & (reliability: 320.0) & (original description: Putative Hd5, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf03255_231831-236822' '(at5g47670 : 197.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|36087 : 187.0) no description available & (p25209|nfyb_maize : 149.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 394.0) & (original description: Putative l1l, Description = Leafy cotyledon 1-like protein, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf04207_129589-138394' '(at2g37060 : 236.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25209|nfyb_maize : 205.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|36087 : 205.0) no description available & (gnl|cdd|64661 : 94.9) no description available & (reliability: 472.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf06132_143860-146189' '(gnl|cdd|36087 : 156.0) no description available & (at1g09030 : 147.0) "nuclear factor Y, subunit B4" (NF-YB4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B5 (TAIR:AT2G47810.1); Has 1487 Blast hits to 1487 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 373; Plants - 505; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (p25209|nfyb_maize : 120.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 294.0) & (original description: Putative NFYA, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf07205_33106-38761' '(at3g53340 : 193.0) "nuclear factor Y, subunit B10" (NF-YB10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36087 : 190.0) no description available & (p25209|nfyb_maize : 185.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 92.2) no description available & (reliability: 386.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf08836_20837-24805' '(gnl|cdd|36087 : 149.0) no description available & (at5g47670 : 134.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (q65xk1|nfyb4_orysa : 117.0) Nuclear transcription factor Y subunit B-4 (OsNF-YB-4) (Transcriptional activator HAP3C) - Oryza sativa (Rice) & (reliability: 268.0) & (original description: Putative LEC1A, Description = Leafy cotyledon 1A, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf10287_124746-127141' '(at4g14540 : 208.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 197.0) no description available & (q60eq4|nfyb3_orysa : 171.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 90.2) no description available & (reliability: 416.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf11037_71805-74251' '(gnl|cdd|36087 : 181.0) no description available & (at2g47810 : 168.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5qmg3|nfyb2_orysa : 148.0) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (gnl|cdd|64661 : 87.2) no description available & (reliability: 336.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf11386_49738-53261' '(gnl|cdd|36087 : 187.0) no description available & (at4g14540 : 173.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (p25209|nfyb_maize : 166.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 99.5) no description available & (reliability: 346.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T
'27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf15116_137267-143211' '(gnl|cdd|36087 : 191.0) no description available & (at2g37060 : 186.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 184.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 88.3) no description available & (reliability: 372.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben044scf00000193ctg004_398-2053' '(at1g54830 : 115.0) "nuclear factor Y, subunit C3" (NF-YC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34805 : 112.0) no description available & (gnl|cdd|36870 : 107.0) no description available & (reliability: 230.0) & (original description: Putative Os04g0683400, Description = HAP5 subunit of HAP complex, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben044scf00006176ctg010_1-1603' '(at5g43250 : 126.0) "nuclear factor Y, subunit C13" (NF-YC13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaC07g16980D, Description = BnaC07g16980D protein, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf00594_493281-498573' '(at1g08970 : 223.0) heme activated protein (HAP5c); "nuclear factor Y, subunit C9" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36870 : 150.0) no description available & (gnl|cdd|34805 : 133.0) no description available & (reliability: 446.0) & (original description: Putative NTF, Description = Nuclear transcription factor Y subunit C-2, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf01111_547896-621386' '(at1g54830 : 115.0) "nuclear factor Y, subunit C3" (NF-YC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34805 : 112.0) no description available & (gnl|cdd|36870 : 106.0) no description available & (reliability: 230.0) & (original description: Putative Os04g0683400, Description = HAP5 subunit of HAP complex, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf01520_575572-578342' '(at1g08970 : 231.0) heme activated protein (HAP5c); "nuclear factor Y, subunit C9" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36870 : 148.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 462.0) & (original description: Putative NFYC9, Description = Nuclear transcription factor Y subunit C-9, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf02155_277016-279733' '(at3g48590 : 270.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 164.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 540.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf05621_238798-241211' '(at5g43250 : 126.0) "nuclear factor Y, subunit C13" (NF-YC13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaC07g16980D, Description = BnaC07g16980D protein, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf06394_542900-549109' '(at5g63470 : 105.0) "nuclear factor Y, subunit C4" (NF-YC4); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C1 (TAIR:AT3G48590.1); Has 1376 Blast hits to 1376 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 467; Fungi - 353; Plants - 441; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|34805 : 96.0) no description available & (gnl|cdd|36870 : 80.2) no description available & (reliability: 210.0) & (original description: Putative NFYC, Description = Nuclear transcription factor Y subunit C-4, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf10556_91633-101519' '(at3g12480 : 178.0) "nuclear factor Y, subunit C11" (NF-YC11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G19490.1); Has 1099 Blast hits to 1099 proteins in 222 species: Archae - 0; Bacteria - 6; Metazoa - 308; Fungi - 314; Plants - 371; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|36872 : 157.0) no description available & (gnl|cdd|34844 : 91.7) no description available & (reliability: 356.0) & (original description: Putative dpb3, Description = Dr1-associated corepressor, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf18002_3503-6246' '(at3g48590 : 268.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 162.0) no description available & (gnl|cdd|34805 : 135.0) no description available & (reliability: 536.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T
'27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf21557_217208-219931' '(at3g48590 : 248.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 164.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 496.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'nbv0.3scaffold1524_46850-66768' '(at4g29000 : 293.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 85.5) no description available & (reliability: 586.0) & (original description: Putative lin54, Description = AtTCX5, PFAM = PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00013209ctg010_6640-16004' '(at4g29000 : 323.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 89.0) no description available & (reliability: 646.0) & (original description: Putative lin54, Description = AtTCX5, PFAM = PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00013209ctg012_1-4556' '(at2g20110 : 138.0) Tesmin/TSO1-like CXC domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT4G29000.1); Has 1016 Blast hits to 700 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 306; Fungi - 3; Plants - 316; Viruses - 1; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|36386 : 106.0) no description available & (reliability: 276.0) & (original description: Putative MTL5, Description = AtTCX5, PFAM = PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00041167ctg005_1457-4905' '(at4g14770 : 259.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 173.0) no description available & (reliability: 518.0) & (original description: Putative BnaA01g24520D, Description = BnaA01g24520D protein, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf00349_369506-381994' '(at3g22780 : 177.0) putative DNA binding protein (tso1) mRNA, tso1-3 allele,; CHINESE FOR 'UGLY' (TSO1); CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: TESMIN/TSO1-like CXC 2 (TAIR:AT4G14770.1); Has 1209 Blast hits to 687 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 404; Fungi - 6; Plants - 347; Viruses - 0; Other Eukaryotes - 452 (source: NCBI BLink). & (gnl|cdd|36386 : 164.0) no description available & (reliability: 354.0) & (original description: Putative lin54, Description = Protein lin-54 homolog, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03164_507099-531690' '(at4g29000 : 448.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 193.0) no description available & (reliability: 896.0) & (original description: Putative TCX5, Description = Protein tesmin/TSO1-like CXC 5, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03164_508384-514529' '(at4g29000 : 333.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 168.0) no description available & (reliability: 666.0) & (original description: Putative lin54, Description = Protein lin-54 homolog, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03469_108424-117722' '(at4g14770 : 361.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 216.0) no description available & (reliability: 722.0) & (original description: Putative TCX2, Description = Protein tesmin/TSO1-like CXC 2, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf08617_67607-78060' '(at4g14770 : 176.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 163.0) no description available & (reliability: 352.0) & (original description: Putative lin54, Description = Abnormal cell lineage protein 54, PFAM = PF03638;PF03638)' T
'27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf13098_81678-96599' '(at4g29000 : 465.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 200.0) no description available & (reliability: 930.0) & (original description: Putative TCX5, Description = Protein tesmin/TSO1-like CXC 5, PFAM = PF03638;PF03638)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'nbv0.3scaffold14062_34438-41266' '(at5g22220 : 378.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 241.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 756.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF16421;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'nbv0.5scaffold2429_183180-189930' '(at5g22220 : 372.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 249.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 744.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF16421;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf00801_403899-414121' '(at5g03415 : 340.0) Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.; DPB; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Transcription factor DP, C-terminal (InterPro:IPR014889), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor DP (InterPro:IPR015648), Transcription factor DP, subgroup (InterPro:IPR016556); BEST Arabidopsis thaliana protein match is: Transcription factor DP (TAIR:AT5G02470.3). & (gnl|cdd|38040 : 275.0) no description available & (gnl|cdd|72205 : 157.0) no description available & (reliability: 680.0) & (original description: Putative dp, Description = DP protein, PFAM = PF08781;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01359_291868-304807' '(at5g22220 : 181.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 132.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 362.0) & (original description: Putative E2F4, Description = E2F4, PFAM = PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01372_129929-135689' '(at2g36010 : 415.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.; E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37788 : 251.0) no description available & (gnl|cdd|66044 : 110.0) no description available & (reliability: 830.0) & (original description: Putative E2FA, Description = Transcription factor E2FA, PFAM = PF16421;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01750_1607245-1614206' '(at5g22220 : 375.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 245.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 750.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF02319;PF16421)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf04654_468097-472863' '(at3g48160 : 323.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37789 : 298.0) no description available & (gnl|cdd|66044 : 87.9) no description available & (reliability: 646.0) & (original description: Putative E2FF, Description = E2F transcription factor-like E2FF, PFAM = PF02319;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf05411_235305-241058' '(at1g47870 : 238.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. AtE2Fc is regulated by a balance between gene expression and ubiquitin-proteasome proteolysis. AtE2Fc might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. E2Fc has been shown to interact with DPB in its nonphosphorylated form; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.; ATE2F2; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.3). & (gnl|cdd|37788 : 197.0) no description available & (gnl|cdd|66044 : 95.2) no description available & (reliability: 476.0) & (original description: Putative E2FC, Description = Transcription factor E2FC, PFAM = PF16421;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf06280_193535-200600' '(gnl|cdd|37789 : 281.0) no description available & (at3g48160 : 263.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|66044 : 86.0) no description available & (reliability: 526.0) & (original description: Putative e2Ff, Description = Transcription factor E2F7, PFAM = PF02319;PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf07162_343040-348037' '(at3g48160 : 268.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37789 : 239.0) no description available & (reliability: 536.0) & (original description: Putative e2Ff, Description = E2F transcription factor-like E2FE, PFAM = PF02319)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf08034_40100-47403' '(at5g22220 : 393.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 246.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 786.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF02319;PF16421)' T
'27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf10018_14587-21465' '(at5g22220 : 374.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 244.0) no description available & (gnl|cdd|66044 : 106.0) no description available & (reliability: 748.0) & (original description: Putative E2F, Description = Transcription factor (E2F), PFAM = PF16421;PF02319)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'nbv0.3scaffold38582_15686-19674' '(gnl|cdd|68447 : 488.0) no description available & (at1g73730 : 449.0) Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.; ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative einl1, Description = Ethylene insensitive (EIN3/EIL)-like transcription regulator, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'nbv0.5scaffold581_99659-103176' '(gnl|cdd|68447 : 395.0) no description available & (at5g65100 : 332.0) Ethylene insensitive 3 family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT5G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative EIL4, Description = Putative ETHYLENE INSENSITIVE 3-like 4 protein, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben044scf00010278ctg016_1-3951' '(at3g20770 : 628.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 534.0) no description available & (reliability: 1256.0) & (original description: Putative EIN3, Description = Transcription factor, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben044scf00010278ctg021_5008-8952' '(at3g20770 : 607.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 547.0) no description available & (reliability: 1214.0) & (original description: Putative in3, Description = EIN3-like protein, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf00304_118862-122706' '(at3g20770 : 615.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 516.0) no description available & (reliability: 1230.0) & (original description: Putative LeEIL4, Description = EIN3-like protein, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf00304_196714-200501' '(at3g20770 : 656.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 542.0) no description available & (reliability: 1312.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf02688_62818-67549' '(gnl|cdd|68447 : 464.0) no description available & (at1g73730 : 423.0) Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.; ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative einl1, Description = Ethylene insensitive (EIN3/EIL)-like transcription regulator, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf03510_140469-143986' '(gnl|cdd|68447 : 395.0) no description available & (at5g65100 : 338.0) Ethylene insensitive 3 family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT5G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative EIL4, Description = Putative ETHYLENE INSENSITIVE 3-like 4 protein, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf05588_1000693-1004522' '(at3g20770 : 623.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 534.0) no description available & (reliability: 1246.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf17776_48815-52635' '(gnl|cdd|68447 : 535.0) no description available & (at3g20770 : 530.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative EIL3, Description = EIL3, PFAM = PF04873)' T
'27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf26023_14586-18040' '(at3g20770 : 668.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 561.0) no description available & (reliability: 1336.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold2084_18126-24839' '(at1g32240 : 237.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold7775_13552-20265' '(at2g20570 : 209.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 418.0) & (original description: Putative GLK2, Description = Transcription activator GLK2, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold9633_43076-50330' '(at3g24120 : 311.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold10244_5189-8133' '(at3g46640 : 226.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 452.0) & (original description: Putative myb, Description = MYB1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold15145_13739-16638' '(at3g10760 : 202.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold17163_17054-21502' '(at2g02060 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative BnaA02g21100D, Description = BnaA02g21100D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold18054_1918-5562' '(at2g38300 : 139.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold18801_1-5735' '(at5g42630 : 182.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative KAN4, Description = Probable transcription factor KAN4, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold19841_1-5043' '(at5g42630 : 173.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold25829_309-6767' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold26427_10142-16987' '(at4g13640 : 201.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold27222_23160-27138' '(at1g68670 : 230.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold27256_6185-12644' '(at2g20570 : 227.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 454.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold37417_8363-16881' '(at5g45580 : 136.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold56156_9255-13077' '(at5g06800 : 202.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 404.0) & (original description: Putative myb1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold60450_1545-11015' '(at5g16560 : 188.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold60460_1411-5048' '(at2g38300 : 158.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative glysoja_042050, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold61643_5223-11331' '(at2g42660 : 94.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold64234_1-7746' '(at1g32240 : 174.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold72021_4847-8841' '(at5g45580 : 177.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PHL11, Description = Myb family transcription factor PHL11, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold81802_1-4124' '(at5g06800 : 202.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 404.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold865_395027-397959' '(at3g46640 : 183.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 366.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1204_412851-415795' '(at3g46640 : 200.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 400.0) & (original description: Putative PCL1, Description = Protein phytoclock 1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1816_92141-97739' '(at2g40260 : 104.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400029440, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1894_261900-267227' '(at2g38300 : 116.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold2758_268308-281306' '(at5g06800 : 117.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 234.0) & (original description: Putative PHL5, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold3873_107149-113842' '(at2g01060 : 297.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold6948_72412-76503' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative MYB36, Description = MYB-related protein, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold7918_3413-6315' '(at3g10760 : 202.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00006363ctg003_13907-20951' '(at1g32240 : 166.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00007844ctg009_1-2598' '(at5g44190 : 135.0) Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GOLDEN2-like 2 (GLK2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 1672 Blast hits to 1670 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative glk1, Description = Two-component response regulator-like APRR2, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00008341ctg005_1358-8673' '(at3g24120 : 286.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00010858ctg000_4000-9055' '(at5g45580 : 178.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PHL11, Description = Myb family transcription factor PHL11, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00013875ctg011_2705-8304' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00013891ctg002_5622-12090' '(at2g20570 : 224.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 448.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00017924ctg001_6118-9158' '(at4g13640 : 117.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00024833ctg020_9073-13419' '(at1g69580 : 215.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00025662ctg005_3634-11481' '(at4g13640 : 276.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00026094ctg008_2382-6799' '(at5g29000 : 161.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC08g13160D, Description = BnaC08g13160D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00026094ctg009_1-2331' '(at4g28610 : 87.4) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00029032ctg001_13791-17961' '(at1g69580 : 225.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative PHL8, Description = Myb family transcription factor PHL8, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00042927ctg000_1767-10247' '(at1g32240 : 172.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00057462ctg000_1898-6234' '(at5g06800 : 201.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 402.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00060696ctg000_4725-8816' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00096_63980-67866' '(at5g06800 : 149.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 298.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00138_609515-614792' '(at1g79430 : 337.0) Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.; ALTERED PHLOEM DEVELOPMENT (APL); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G12730.1); Has 1662 Blast hits to 1649 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1644; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00340_322954-327859' '(at5g06800 : 187.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 374.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00343_759671-764290' '(at2g01060 : 243.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00872_131154-136019' '(at1g68670 : 229.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01240_1176701-1180400' '(at2g03500 : 226.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative EFM, Description = Two-component response regulator ARR18, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01482_176045-178977' '(at3g46640 : 182.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 364.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01999_364066-366965' '(at3g10760 : 198.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02039_440487-447736' '(at5g29000 : 216.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02145_986299-990290' '(at2g02060 : 114.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02145_986425-990747' '(at2g02060 : 96.3) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02358_145056-156087' '(at4g13640 : 204.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02911_176754-186164' '(at5g16560 : 176.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03080_160218-164568' '(at2g03500 : 162.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative GLK44, Description = Two-component response regulator ARR1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03150_349470-354072' '(at1g68670 : 216.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03202_1099724-1103586' '(at2g38300 : 174.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03300_284946-289263' '(at2g03500 : 166.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative EFM, Description = Two-component response regulator ARR1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03370_579526-582437' '(at3g10760 : 227.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03488_851117-858727' '(at4g13640 : 263.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03863_158364-173405' '(at5g06800 : 201.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 402.0) & (original description: Putative myb1, Description = Myb family transcription factor APL, PFAM = PF14379;PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03934_15033-22419' '(at4g28610 : 227.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PHR1, Description = Protein PHOSPHATE STARVATION RESPONSE 1, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04082_364122-368179' '(at1g69580 : 229.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PHL8, Description = Myb family transcription factor PHL8, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04632_51951-56676' '(at3g04030 : 328.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04722_190325-194676' '(at2g01060 : 144.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative myb, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04740_166574-181666' '(at5g06800 : 108.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 216.0) & (original description: Putative myb, Description = Myb family transcription factor APL, PFAM = )' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05278_122034-124978' '(at3g46640 : 224.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 448.0) & (original description: Putative myb, Description = MYB1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05295_175352-180292' '(at1g79430 : 315.0) Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.; ALTERED PHLOEM DEVELOPMENT (APL); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G12730.1); Has 1662 Blast hits to 1649 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1644; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05368_566409-570046' '(at2g38300 : 159.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05516_61187-77696' '(at4g28610 : 220.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05911_166022-171507' '(at2g42660 : 89.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative PGSC0003DMG400028830, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06065_29593-33942' '(at2g38300 : 139.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06155_38910-45775' '(at4g28610 : 228.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative csp1, Description = CDPK substrate protein 1, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06318_202199-206145' '(at2g38300 : 169.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative glysoja_042050, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06688_178049-186787' '(at5g29000 : 219.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06721_47618-54189' '(at2g20570 : 237.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 474.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06867_537027-540939' '(at4g37180 : 167.0) myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen; Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G03500.1); Has 1651 Blast hits to 1647 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 0; Plants - 1596; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative Sb02g001600, Description = Putative uncharacterized protein Sb02g001600, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07645_417444-421669' '(at3g04030 : 333.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative scMYB55, Description = ScMYB55 protein, PFAM = PF00249;PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07841_23675-33049' '(at5g16560 : 187.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07894_178645-201792' '(at2g38300 : 120.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf08041_96391-99419' '(at3g46640 : 220.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 440.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09116_127484-131811' '(at4g28610 : 95.1) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09459_213415-227429' '(at3g24120 : 318.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09628_260011-268468' '(at1g32240 : 191.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09774_336568-343027' '(at2g20570 : 239.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 478.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf11137_10673-24691' '(at2g20570 : 222.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 444.0) & (original description: Putative glk1, Description = Transcription activator GLK1-like protein, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf11767_45173-49378' '(at4g13640 : 85.5) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf12280_108746-123359' '(at5g06800 : 110.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 220.0) & (original description: Putative PHL1, Description = BnaA03g55680D protein, PFAM = PF14379)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf12321_49494-56226' '(at2g02060 : 92.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf14361_147432-162061' '(at1g32240 : 176.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf16258_57816-63801' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf18955_72163-76409' '(at3g04030 : 315.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf27034_1-4751' '(at2g03500 : 271.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative EFM, Description = Myb family transcription factor EFM, PFAM = PF00249)' T
'27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf31568_21699-28157' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold5324_3279-7510' '(at1g07530 : 639.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 241.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1278.0) & (original description: Putative SCL9, Description = Scarecrow-like protein 9, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold12765_16613-20859' '(at1g07530 : 650.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 337.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold26365_2544-6169' '(at4g17230 : 606.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 336.0) no description available & (reliability: 1212.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold31263_15-3952' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold35012_2006-5295' '(at3g49950 : 360.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 255.0) no description available & (q8gve1|cigr2_orysa : 179.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 720.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 318.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold270_797547-801484' '(at5g59450 : 483.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold5986_43483-47108' '(at4g17230 : 608.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1216.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00002677ctg047_1523-5915' '(at1g07530 : 642.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 338.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1284.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00004532ctg011_12509-15653' '(at3g49950 : 358.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 251.0) no description available & (q8gve1|cigr2_orysa : 169.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 716.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf00262_615553-619673' '(at1g07530 : 466.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 310.0) no description available & (q69vg1|cigr1_orysa : 212.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 932.0) & (original description: Putative GRAS4, Description = GRAS4, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf00709_130046-133404' '(at3g49950 : 504.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 242.0) no description available & (q8gve1|cigr2_orysa : 144.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1008.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 183.4) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01234_276768-280393' '(at4g17230 : 610.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 520.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 340.0) no description available & (reliability: 1220.0) & (original description: Putative SCL13, Description = SCL domain class transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 344.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02048_79707-83338' '(at4g17230 : 603.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 525.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 342.0) no description available & (reliability: 1206.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02749_387679-391289' '(q4vyc8|nsp1_medtr : 525.0) Nodulation signaling pathway 1 protein - Medicago truncatula (Barrel medic) & (at3g13840 : 419.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2103 Blast hits to 2091 proteins in 270 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 190.0) no description available & (reliability: 838.0) & (original description: Putative nsp1, Description = Nodulation signaling pathway 1 protein, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02911_705964-709526' '(at4g17230 : 566.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 500.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1132.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 664.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03541_2332-16303' '(at4g17230 : 609.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 522.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 339.0) no description available & (reliability: 1218.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03944_292579-295460' '(at1g07530 : 102.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative GRAS07, Description = GRAS family transcription factor, PFAM = )' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04010_89864-93084' '(at1g55580 : 361.0) Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.; Lateral Suppressor (LAS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: secondary shoot formation, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2438 Blast hits to 2402 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 4; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 307.0) no description available & (q84mm9|moc_orysa : 250.0) Protein MONOCULM 1 - Oryza sativa (Rice) & (reliability: 722.0) & (original description: Putative Ls, Description = Lateral suppressor protein, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04382_131133-135364' '(at1g07530 : 600.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 242.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1200.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04960_37356-40648' '(at3g49950 : 364.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (q8gve1|cigr2_orysa : 179.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 728.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf05241_141967-145187' '(at1g55580 : 368.0) Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.; Lateral Suppressor (LAS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: secondary shoot formation, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2438 Blast hits to 2402 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 4; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 307.0) no description available & (q84mm9|moc_orysa : 257.0) Protein MONOCULM 1 - Oryza sativa (Rice) & (reliability: 736.0) & (original description: Putative ls, Description = Lateral suppressor, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf06996_225465-229402' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 204.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf07391_71756-75783' '(at1g63100 : 612.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 2506 Blast hits to 2453 proteins in 309 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 0; Plants - 2441; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (q8s4w7|gai1_vitvi : 237.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 1224.0) & (original description: Putative SCL28, Description = Scarecrow-like protein 28, PFAM = PF03514)' T
'27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf09994_22194-26230' '(at1g63100 : 568.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 2506 Blast hits to 2453 proteins in 309 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 0; Plants - 2441; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67150 : 319.0) no description available & (q8s4w7|gai1_vitvi : 209.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 1136.0) & (original description: Putative PAL1B, Description = Scarecrow-like protein 28, PFAM = PF03514)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold65_99198-107558' '(at2g34710 : 1315.0) Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.; PHABULOSA (PHB); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G30490.1); Has 3393 Blast hits to 3288 proteins in 275 species: Archae - 0; Bacteria - 20; Metazoa - 905; Fungi - 114; Plants - 2320; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87593 : 219.0) no description available & (reliability: 2630.0) & (original description: Putative HOX32, Description = Homeobox-leucine zipper protein HOX32, PFAM = PF00046;PF01852;PF08670)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold3849_4003-7787' '(at3g01470 : 135.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 111.0) no description available & (reliability: 270.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold4702_1-3732' '(at4g37790 : 174.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 338.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold5997_44712-52718' '(o04135|knap2_maldo : 415.0) Homeobox protein knotted-1-like 2 (KNAP2) - Malus domestica (Apple) (Malus sylvestris) & (at4g08150 : 363.0) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.; KNOTTED-like from Arabidopsis thaliana (KNAT1); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1); Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4; Bacteria - 107; Metazoa - 2529; Fungi - 972; Plants - 3913; Viruses - 2; Other Eukaryotes - 23743 (source: NCBI BLink). & (gnl|cdd|35992 : 141.0) no description available & (gnl|cdd|67408 : 83.7) no description available & (reliability: 726.0) & (original description: Putative KN1, Description = Homeotic protein knotted-1, PFAM = PF03789;PF03790;PF05920;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold6006_50663-54085' '(at5g65310 : 125.0) Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.; homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10595 Blast hits to 10554 proteins in 566 species: Archae - 0; Bacteria - 4; Metazoa - 8208; Fungi - 200; Plants - 1989; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 250.0) & (original description: Putative HD18, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold6286_27427-33353' '(at4g16780 : 228.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 146.0) no description available & (gnl|cdd|68199 : 80.9) no description available & (reliability: 456.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF04618;PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold7564_14412-35868' '(at5g44180 : 1166.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 2332.0) & (original description: Putative hox7, Description = Homeobox protein, PFAM = PF02791;PF05066;PF15613;PF15612;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold9651_15755-20597' '(at3g03660 : 202.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 11 (WOX11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative WOX11, Description = WUSCHEL-related homeobox 11, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11240_22509-25573' '(at2g22800 : 231.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 127.0) no description available & (reliability: 462.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11520_30261-37895' '(at5g02030 : 277.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 158.0) no description available & (gnl|cdd|70974 : 123.0) no description available & (reliability: 554.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11844_848-5453' '(at2g35940 : 416.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 173.0) no description available & (gnl|cdd|70974 : 166.0) no description available & (reliability: 832.0) & (original description: Putative BLH1, Description = BEL1-like homeodomain protein 1, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold12778_1321-4981' '(at1g69780 : 172.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 129.0) no description available & (reliability: 344.0) & (original description: Putative HAT7, Description = Homeobox-leucine zipper protein HAT7, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold21922_25095-29465' '(at2g22430 : 185.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 370.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold23783_2089-18797' '(at5g25220 : 381.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 374.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 160.0) no description available & (reliability: 762.0) & (original description: Putative KNAT5, Description = Homeobox protein knotted-1-like 5, PFAM = PF03790;PF03791;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold29408_1-4007' '(at4g16780 : 280.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 153.0) no description available & (gnl|cdd|68199 : 97.9) no description available & (reliability: 560.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF02183;PF04618;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold30880_10899-19639' '(at1g52150 : 1359.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 236.0) no description available & (reliability: 2718.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF01852;PF08670;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold34226_273-5123' '(at1g69780 : 249.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 498.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold35914_14582-18289' '(at4g36740 : 184.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 116.0) no description available & (reliability: 368.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold39460_5720-10372' '(at3g18010 : 181.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.; WUSCHEL related homeobox 1 (WOX1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 2 (TAIR:AT5G59340.1); Has 587 Blast hits to 587 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 587; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ybv1|wus_antma : 96.7) Protein WUSCHEL (Protein ROSULATA) - Antirrhinum majus (Garden snapdragon) & (reliability: 362.0) & (original description: Putative wox1, Description = Putative wuschel homeobox protein WOX1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold39635_6199-19594' '(at4g36870 : 376.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 181.0) no description available & (gnl|cdd|70974 : 162.0) no description available & (reliability: 752.0) & (original description: Putative BLH2, Description = BEL1-like homeodomain protein 2, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold41601_4102-15736' '(at3g18380 : 317.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 634.0) & (original description: Putative SHH2, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 2, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold52886_1178-8420' '(at1g62990 : 428.0) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.; KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5187 Blast hits to 5186 proteins in 324 species: Archae - 0; Bacteria - 0; Metazoa - 1947; Fungi - 303; Plants - 2774; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (p46606|hd1_brana : 424.0) Homeobox protein HD1 - Brassica napus (Rape) & (gnl|cdd|35992 : 170.0) no description available & (reliability: 856.0) & (original description: Putative KNAT7, Description = Homeobox protein knotted-1-like 7, PFAM = PF03791;PF05920;PF03790)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold75408_2768-8086' '(at4g35550 : 210.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative WOX13, Description = WUSCHEL-related homeobox 13, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold78734_1704-7286' '(at4g35550 : 228.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative wox13, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold83711_1-6475' '(p46608|hsbh1_soybn : 395.0) Homeobox protein SBH1 - Glycine max (Soybean) & (at1g62360 : 376.0) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.; SHOOT MERISTEMLESS (STM); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1); Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0; Bacteria - 0; Metazoa - 1706; Fungi - 298; Plants - 3900; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (gnl|cdd|35992 : 143.0) no description available & (gnl|cdd|67408 : 83.4) no description available & (reliability: 752.0) & (original description: Putative ina, Description = Invaginata, PFAM = PF05920;PF03789;PF03790;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1_1014248-1072166' '(at1g46480 : 213.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. This protein also contains an acidic domain approximately 10 residues upstream of the WUS box. Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth.; WUSCHEL related homeobox 4 (WOX4); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 537 Blast hits to 535 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8ll11|wus_pethy : 95.9) Protein WUSCHEL (PhWUS) (Protein TERMINATOR) - Petunia hybrida (Petunia) & (reliability: 426.0) & (original description: Putative WOX4, Description = WUSCHEL-related homeobox 4, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold21_896158-900529' '(at4g37790 : 171.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 332.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold138_522200-531249' '(at1g52150 : 1447.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2894.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF01852;PF00046;PF08670)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold372_612651-618247' '(at4g35550 : 228.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold988_145275-148026' '(at3g01470 : 102.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 97.5) no description available & (reliability: 204.0) & (original description: Putative HAT7, Description = Helix-turn-helix motif-containing protein, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1470_22808-26095' '(at2g22800 : 212.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 424.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1584_270499-275740' '(at1g73360 : 872.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 186.0) no description available & (reliability: 1744.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2097_160441-164332' '(at5g15150 : 155.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 310.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2244_141161-145034' '(at3g01470 : 133.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 111.0) no description available & (reliability: 266.0) & (original description: Putative ATHB6, Description = Transcription factor HEX, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2650_6819-121270' '(at4g00730 : 637.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold3130_14417-35885' '(at5g44180 : 1165.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 2330.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF02791;PF15612;PF00046;PF15613;PF05066)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold9405_4524-8264' '(at3g01470 : 130.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 113.0) no description available & (reliability: 260.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00002932ctg019_293-5600' '(at4g34610 : 303.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 178.0) no description available & (gnl|cdd|70974 : 159.0) no description available & (reliability: 606.0) & (original description: Putative BnaA02g17200D, Description = BnaA02g17200D protein, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003240ctg005_617-15245' '(at1g73360 : 500.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 154.0) no description available & (reliability: 1000.0) & (original description: Putative BnaA02g03520D, Description = BnaA02g03520D protein, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003749ctg004_1-3370' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 112.0) no description available & (reliability: 268.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003788ctg014_1-1694' '(at5g06710 : 130.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 104.0) no description available & (reliability: 242.0) & (original description: Putative HAT3, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00006406ctg010_2806-7152' '(at4g32980 : 306.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 118.0) no description available & (gnl|cdd|70974 : 105.0) no description available & (reliability: 612.0) & (original description: Putative BL4, Description = Bell-like homeodomain protein 4, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00006998ctg010_2358-9049' '(at4g36870 : 331.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|70974 : 163.0) no description available & (gnl|cdd|35992 : 143.0) no description available & (reliability: 662.0) & (original description: Putative BEL1, Description = BEL1-like homeodomain protein 2, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00007647ctg005_2694-10226' '(at4g04890 : 1153.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2306.0) & (original description: Putative PDF2, Description = Homeobox-leucine zipper protein PROTODERMAL FACTOR 2, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008188ctg018_9044-13822' '(at4g32980 : 261.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 106.0) no description available & (gnl|cdd|70974 : 99.6) no description available & (reliability: 522.0) & (original description: Putative ATH1, Description = Homeobox protein ATH1, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008313ctg002_694-6070' '(at1g27050 : 147.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 54 (HB54); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 5308 Blast hits to 5298 proteins in 368 species: Archae - 2; Bacteria - 4; Metazoa - 3484; Fungi - 119; Plants - 1607; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400017639, Description = Homeobox transcription factor, PFAM = PF00076)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008313ctg008_8265-12345' '(at3g01470 : 131.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 113.0) no description available & (reliability: 262.0) & (original description: Putative ATHB6, Description = Transcription factor HEX, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00009443ctg014_914-8280' '(at4g00730 : 997.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 207.0) no description available & (reliability: 1994.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00013376ctg000_2546-10735' '(p48786|prh_petcr : 260.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 234.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (gnl|cdd|39500 : 124.0) no description available & (reliability: 468.0) & (original description: Putative PRH, Description = Pathogenesis-related homeodomain protein, PFAM = PF00628;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00014904ctg009_1173-8674' '(at5g46880 : 768.0) homeobox-7 (HB-7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 4 (TAIR:AT4G17710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 183.0) no description available & (reliability: 1536.0) & (original description: Putative HDG5, Description = Homeobox-leucine zipper protein HDG5, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00016412ctg005_1-3648' '(at5g03790 : 168.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 336.0) & (original description: Putative Gl, Description = Multicellular trichome development class I homeodomain-leucine zipper transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00017284ctg005_3553-11145' '(at3g18380 : 204.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 408.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00017716ctg003_16023-20616' '(at5g15150 : 177.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 354.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018051ctg003_21458-27927' '(at1g70510 : 166.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (p46608|hsbh1_soybn : 128.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|67408 : 86.8) no description available & (reliability: 332.0) & (original description: Putative ina, Description = Homeobox protein knotted-1-like 1, PFAM = PF03789;PF03791;PF03790)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018084ctg007_1372-8916' '(at5g25220 : 468.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 447.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 936.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF05920;PF03789;PF03790;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018817ctg000_1211-4882' '(at3g01470 : 133.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 266.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00019720ctg005_56223-60376' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 268.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00028751ctg007_5993-9113' '(at3g03660 : 206.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 11 (WOX11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative WOX11, Description = WUSCHEL-related homeobox 11, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00029951ctg005_1-14619' '(at1g23380 : 247.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46609|osh1_orysa : 200.0) Homeobox protein OSH1 - Oryza sativa (Rice) & (gnl|cdd|35992 : 123.0) no description available & (reliability: 494.0) & (original description: Putative NTH9, Description = Homeobox 9, PFAM = PF03790;PF05920;PF03789;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00031055ctg007_6791-10173' '(at1g69780 : 170.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 103.0) no description available & (reliability: 340.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00035059ctg002_3747-18263' '(at1g28420 : 1044.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2088.0) & (original description: Putative hox7, Description = Homeobox transcription factor Hox7, PFAM = PF05066;PF15613;PF02791;PF15612;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00037065ctg005_898-5346' '(at3g60390 : 205.0) Encodes homeobox protein HAT3.; homeobox-leucine zipper protein 3 (HAT3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 4 (TAIR:AT2G44910.1); Has 9598 Blast hits to 9528 proteins in 546 species: Archae - 0; Bacteria - 0; Metazoa - 7082; Fungi - 271; Plants - 2066; Viruses - 4; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35704 : 147.0) no description available & (reliability: 410.0) & (original description: Putative HAT1, Description = Homeobox-leucine zipper protein HAT1, PFAM = PF04618;PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00038539ctg001_1-2983' '(at2g28610 : 91.3) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 90.5) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 182.6) & (original description: Putative ns1, Description = WUSCHEL-related homeobox 3B, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00039239ctg004_1-7667' '(at1g05230 : 934.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.; homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 209.0) no description available & (reliability: 1868.0) & (original description: Putative HDG2, Description = Homeobox-leucine zipper protein HDG2, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00046273ctg002_1-6030' '(at5g41410 : 351.0) Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.; BELL 1 (BEL1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35992 : 187.0) no description available & (gnl|cdd|70974 : 152.0) no description available & (reliability: 702.0) & (original description: Putative BEL1, Description = Homeobox protein BEL1 homolog, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00046567ctg001_359-4656' '(at1g69780 : 298.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 142.0) no description available & (reliability: 596.0) & (original description: Putative HAT7, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00053320ctg000_1819-10072' '(at4g00730 : 711.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 183.0) no description available & (reliability: 1422.0) & (original description: Putative HDG1, Description = Homeobox-leucine zipper protein HDG1, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00054412ctg002_1146-9642' '(at4g03250 : 193.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative PGSC0003DMG400031247, Description = Homeobox protein NANOG, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00058026ctg000_1-8143' '(at5g02030 : 243.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|70974 : 134.0) no description available & (gnl|cdd|35992 : 124.0) no description available & (reliability: 486.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00013_121484-130888' '(at1g52150 : 1384.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2768.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF08670;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00165_568746-575437' '(at2g35940 : 278.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 162.0) no description available & (reliability: 556.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00170_30352-33897' '(at2g28610 : 125.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 104.0) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00170_244197-247360' '(at2g28610 : 100.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 90.9) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 200.0) & (original description: Putative wox3, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00254_546888-553329' '(at5g41410 : 348.0) Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.; BELL 1 (BEL1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35992 : 189.0) no description available & (gnl|cdd|70974 : 153.0) no description available & (reliability: 696.0) & (original description: Putative BnaCnng11290D, Description = BnaCnng11290D protein, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00299_43101-49272' '(at4g03250 : 208.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative TCM_040945, Description = Homeodomain-like superfamily protein, putative isoform 1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00332_919851-927606' '(at1g70510 : 225.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (q41853|rsh1_maize : 192.0) Homeobox protein rough sheath 1 - Zea mays (Maize) & (gnl|cdd|35992 : 121.0) no description available & (gnl|cdd|67408 : 89.1) no description available & (reliability: 450.0) & (original description: Putative kn1, Description = Knotted 1, PFAM = PF03790;PF03791;PF05920;PF03789)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00650_638816-643186' '(at1g23380 : 153.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46608|hsbh1_soybn : 124.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|35992 : 96.6) no description available & (reliability: 306.0) & (original description: Putative kn4, Description = Knotted 4, PFAM = PF03789;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00703_73167-81720' '(at4g21750 : 1160.0) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.; MERISTEM LAYER 1 (ATML1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2320.0) & (original description: Putative ATML1, Description = Homeobox-leucine zipper protein MERISTEM L1, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00830_320598-323679' '(at2g22800 : 139.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 278.0) & (original description: Putative HAT4, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01078_77832-89290' '(at1g70510 : 249.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (p46609|osh1_orysa : 204.0) Homeobox protein OSH1 - Oryza sativa (Rice) & (gnl|cdd|35992 : 129.0) no description available & (reliability: 498.0) & (original description: Putative KNAT6, Description = Homeobox protein knotted-1-like 6, PFAM = PF05920;PF03791;PF03789;PF03790)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01154_881107-884286' '(at2g28610 : 107.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 94.7) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 214.0) & (original description: Putative ns1, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01154_1098511-1102245' '(at2g28610 : 129.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 103.0) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 258.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01189_154970-162721' '(at4g36870 : 375.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|47873 : 197.0) no description available & (gnl|cdd|35992 : 181.0) no description available & (reliability: 750.0) & (original description: Putative Mdh1, Description = Homeodomain protein, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01213_136219-144096' '(at5g25220 : 463.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 449.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 926.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF05920;PF03790;PF03789;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01222_172902-185051' '(at2g01430 : 182.0) homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|35704 : 122.0) no description available & (reliability: 364.0) & (original description: Putative HOX3, Description = Homeobox-leucine zipper protein HOX3, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01337_335142-338099' '(at3g11260 : 144.0) Arabidopsis thaliana WOX5 protein mRNA; WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 7 (TAIR:AT5G05770.1); Has 538 Blast hits to 538 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 538; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 118.0) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative WOX5, Description = WUSCHEL-related homeobox 5, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01362_329892-334322' '(at5g15150 : 178.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 123.0) no description available & (reliability: 356.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01374_753812-762859' '(at1g52150 : 1450.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2900.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF08670;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01490_7112-13123' '(at4g36870 : 321.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 175.0) no description available & (gnl|cdd|70974 : 105.0) no description available & (reliability: 642.0) & (original description: Putative BEL1, Description = BEL1-like homeodomain protein 1, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01521_1684916-1698628' '(at1g69780 : 199.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 108.0) no description available & (reliability: 398.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01611_51870-60741' '(at1g52150 : 1351.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 238.0) no description available & (reliability: 2702.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF01852;PF08670)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01701_1351988-1355818' '(at1g75430 : 263.0) BEL1-like homeodomain 11 (BLH11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: ovule, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5131 Blast hits to 5128 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 2154; Fungi - 324; Plants - 2471; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35992 : 160.0) no description available & (gnl|cdd|70974 : 147.0) no description available & (reliability: 526.0) & (original description: Putative BLH11, Description = BEL1-like homeodomain protein 11, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01727_290757-294685' '(at5g15150 : 162.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 121.0) no description available & (reliability: 324.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01750_832616-838102' '(at2g35940 : 285.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 159.0) no description available & (reliability: 570.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01953_129743-132508' '(at2g46680 : 112.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 94.1) no description available & (reliability: 224.0) & (original description: Putative HB1, Description = Homeobox-leucine zipper protein 1, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02029_225601-235415' '(at4g36870 : 359.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 191.0) no description available & (gnl|cdd|47873 : 177.0) no description available & (reliability: 718.0) & (original description: Putative Bel22, Description = BEL1-related homeotic protein 22, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02108_62531-67787' '(at1g73360 : 856.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 173.0) no description available & (reliability: 1712.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02145_279185-286775' '(p46608|hsbh1_soybn : 408.0) Homeobox protein SBH1 - Glycine max (Soybean) & (at1g62360 : 390.0) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.; SHOOT MERISTEMLESS (STM); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1); Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0; Bacteria - 0; Metazoa - 1706; Fungi - 298; Plants - 3900; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (gnl|cdd|35992 : 142.0) no description available & (gnl|cdd|67408 : 85.7) no description available & (reliability: 780.0) & (original description: Putative ina, Description = Invaginata, PFAM = PF05920;PF03790;PF03791;PF03789)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02217_832422-840371' '(at3g18380 : 204.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 408.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02287_233776-236655' '(at2g46680 : 108.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 90.2) no description available & (reliability: 216.0) & (original description: Putative HB12, Description = Homeobox 12, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02340_621201-624363' '(at1g52150 : 108.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative hb3, Description = Homeobox-leucine zipper protein ATHB-15, PFAM = )' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02366_458489-463765' '(at4g36740 : 172.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 114.0) no description available & (reliability: 344.0) & (original description: Putative gt1, Description = Grassy tillers 1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02369_28305-32850' '(at2g28610 : 104.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 89.4) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02395_431119-444244' '(at1g73360 : 490.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 143.0) no description available & (reliability: 980.0) & (original description: Putative BnaA02g03520D, Description = BnaA02g03520D protein, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02436_367629-381642' '(at5g46880 : 764.0) homeobox-7 (HB-7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 4 (TAIR:AT4G17710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 178.0) no description available & (reliability: 1528.0) & (original description: Putative ROC3, Description = Homeobox-leucine zipper protein ROC3, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02439_52721-56728' '(at3g01470 : 130.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 260.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02439_104871-108124' '(at1g27050 : 149.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 54 (HB54); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 5308 Blast hits to 5298 proteins in 368 species: Archae - 2; Bacteria - 4; Metazoa - 3484; Fungi - 119; Plants - 1607; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g27050, Description = Uncharacterized protein At1g27050, PFAM = PF00076)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02465_83174-99320' '(at1g62990 : 427.0) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.; KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5187 Blast hits to 5186 proteins in 324 species: Archae - 0; Bacteria - 0; Metazoa - 1947; Fungi - 303; Plants - 2774; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (p46606|hd1_brana : 421.0) Homeobox protein HD1 - Brassica napus (Rape) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 854.0) & (original description: Putative KNAT7, Description = Homeobox protein knotted-1-like 7, PFAM = PF03791;PF05920;PF03790)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02537_2167029-2170451' '(at5g65310 : 125.0) Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.; homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10595 Blast hits to 10554 proteins in 566 species: Archae - 0; Bacteria - 4; Metazoa - 8208; Fungi - 200; Plants - 1989; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 250.0) & (original description: Putative HD18, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02541_234619-241725' '(at4g04890 : 1122.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2244.0) & (original description: Putative PDF2, Description = Homeobox-leucine zipper protein PROTODERMAL FACTOR 2, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02563_90382-95095' '(at4g36740 : 178.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 356.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HOX14, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02823_415947-423953' '(o04135|knap2_maldo : 409.0) Homeobox protein knotted-1-like 2 (KNAP2) - Malus domestica (Apple) (Malus sylvestris) & (at4g08150 : 360.0) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.; KNOTTED-like from Arabidopsis thaliana (KNAT1); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1); Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4; Bacteria - 107; Metazoa - 2529; Fungi - 972; Plants - 3913; Viruses - 2; Other Eukaryotes - 23743 (source: NCBI BLink). & (gnl|cdd|35992 : 141.0) no description available & (gnl|cdd|67408 : 83.4) no description available & (reliability: 720.0) & (original description: Putative KN1, Description = Homeotic protein knotted-1, PFAM = PF03789;PF03790;PF03791;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02858_292512-296390' '(at4g16780 : 239.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 150.0) no description available & (gnl|cdd|68199 : 87.9) no description available & (reliability: 478.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF02183;PF00046;PF04618)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02990_896897-901625' '(at4g37790 : 233.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 130.0) no description available & (reliability: 464.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03050_361233-365132' '(at1g75430 : 264.0) BEL1-like homeodomain 11 (BLH11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: ovule, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5131 Blast hits to 5128 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 2154; Fungi - 324; Plants - 2471; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35992 : 157.0) no description available & (gnl|cdd|70974 : 143.0) no description available & (reliability: 528.0) & (original description: Putative BLH11, Description = BEL1-like homeodomain protein 11, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03050_367972-374029' '(at4g34610 : 293.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 175.0) no description available & (gnl|cdd|70974 : 156.0) no description available & (reliability: 586.0) & (original description: Putative BLH6, Description = BEL1-like homeodomain protein 6, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03072_84726-88358' '(at2g18550 : 189.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 21 (HB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 7525 Blast hits to 7522 proteins in 427 species: Archae - 0; Bacteria - 0; Metazoa - 5302; Fungi - 235; Plants - 1881; Viruses - 3; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|35704 : 115.0) no description available & (reliability: 378.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03147_280472-288731' '(at5g02030 : 239.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|70974 : 136.0) no description available & (gnl|cdd|35992 : 123.0) no description available & (reliability: 478.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03169_9079-23359' '(at1g28420 : 1049.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2098.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF05066;PF02791;PF15613;PF00046;PF15612)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03169_593504-596019' '(gnl|cdd|35704 : 96.0) no description available & (at3g01470 : 90.9) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative HAT5, Description = Helix-turn-helix motif-containing protein, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03302_38624-44584' '(at2g27990 : 268.0) Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.; BEL1-like homeodomain 8 (BLH8); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: POX (plant homeobox) family protein (TAIR:AT5G02030.1); Has 5076 Blast hits to 5073 proteins in 336 species: Archae - 0; Bacteria - 0; Metazoa - 2093; Fungi - 319; Plants - 2481; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35992 : 168.0) no description available & (gnl|cdd|70974 : 138.0) no description available & (reliability: 536.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03362_149093-169018' '(at1g23380 : 326.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46608|hsbh1_soybn : 218.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|35992 : 123.0) no description available & (gnl|cdd|67408 : 90.7) no description available & (reliability: 652.0) & (original description: Putative KNAT6, Description = Homeobox protein knotted-1-like 6, PFAM = PF03790;PF03789;PF05920;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03385_661779-669843' '(p48786|prh_petcr : 263.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 236.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (gnl|cdd|39500 : 126.0) no description available & (reliability: 472.0) & (original description: Putative PRH, Description = Pathogenesis-related homeodomain protein, PFAM = PF00628;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03445_88447-91230' '(at1g23380 : 135.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (q9m6d9|stm_braol : 130.0) Homeobox protein Shootmeristemless - Brassica oleracea (Wild cabbage) & (gnl|cdd|35992 : 96.9) no description available & (reliability: 270.0) & (original description: Putative KN2, Description = Homeobox transcription factor KN2, PFAM = PF05920;PF03789)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03673_200964-208113' '(at4g35550 : 207.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03689_157266-162083' '(at4g35550 : 230.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03894_348065-351106' '(at2g46680 : 120.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 90.2) no description available & (reliability: 240.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04220_26968-39458' '(at1g05230 : 946.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.; homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 209.0) no description available & (reliability: 1892.0) & (original description: Putative HDG2, Description = Homeobox-leucine zipper protein HDG2, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04240_232256-238098' '(at4g36740 : 188.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 376.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04339_354924-362277' '(at4g04890 : 358.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 116.0) no description available & (reliability: 716.0) & (original description: Putative PGSC0003DMG400014427, Description = BnaA03g44880D protein, PFAM = PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04372_93150-100531' '(at4g00730 : 996.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 206.0) no description available & (reliability: 1992.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04407_293447-297231' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 268.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04418_423701-428281' '(at2g35940 : 405.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 171.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 810.0) & (original description: Putative BLH1, Description = BEL1-like homeodomain protein 1, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04861_84963-90565' '(at4g34610 : 328.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 176.0) no description available & (gnl|cdd|70974 : 167.0) no description available & (reliability: 656.0) & (original description: Putative BLH3, Description = BEL1-like homeodomain protein 3, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04994_50420-71429' '(at4g36870 : 390.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 187.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 780.0) & (original description: Putative BLH2, Description = BEL1-like homeodomain protein 2, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05034_453218-459028' '(at4g00730 : 658.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 175.0) no description available & (reliability: 1316.0) & (original description: Putative h3, Description = Homeodomain protein, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05105_651-17779' '(at1g73360 : 511.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 151.0) no description available & (reliability: 1022.0) & (original description: Putative HB83, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF00046;PF01852)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05146_547627-554350' '(at1g73360 : 840.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 190.0) no description available & (reliability: 1680.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05294_8231-18420' '(at3g18380 : 285.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 570.0) & (original description: Putative SHH2, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 2, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05506_621662-625185' '(at5g59340 : 126.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.; WUSCHEL related homeobox 2 (WOX2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 921 Blast hits to 921 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 86.3) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 252.0) & (original description: Putative wox2, Description = Putative wuschel homeobox protein WOX2, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05543_178984-182585' '(at3g01470 : 135.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 114.0) no description available & (reliability: 270.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05886_58022-60869' '(at2g46680 : 161.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 322.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06027_82907-87067' '(at2g33880 : 190.0) Encodes a protein with similarity to WUS type homeodomain protein. Required for meristem growth and development and acts through positive regulation of WUS. Loss of function phenotypes include embryo lethality, hyponastic cotyledons, reduced root development and smaller meristems. Phenotypes can be rescued by addition of sucrose in the growth media. Overexpression can partially rescue the triple mutant cytokinin receptor phenotype suggesting HB-3 is a downstream effector of cytokinin signaling.; homeobox-3 (HB-3); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 8 (TAIR:AT5G45980.1); Has 671 Blast hits to 615 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 22; Plants - 589; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative wox9, Description = Putative wuschel homeobox protein WOX9, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06267_413902-417382' '(q8ll11|wus_pethy : 367.0) Protein WUSCHEL (PhWUS) (Protein TERMINATOR) - Petunia hybrida (Petunia) & (at2g17950 : 134.0) Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development.; WUSCHEL (WUS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 617 Blast hits to 617 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 2; Plants - 575; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative WUS, Description = Protein WUSCHEL, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06286_164439-168651' '(at1g69780 : 310.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 137.0) no description available & (reliability: 620.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06590_246271-249594' '(q8w0f1|wox5_orysa : 92.4) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (at2g28610 : 91.3) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06761_47474-54902' '(at5g25220 : 463.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 451.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 926.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF03790;PF03789;PF03791;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06879_35463-47431' '(at2g35940 : 299.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 178.0) no description available & (gnl|cdd|70974 : 157.0) no description available & (reliability: 598.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06923_18587-23242' '(at4g16780 : 268.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 148.0) no description available & (gnl|cdd|68199 : 94.4) no description available & (reliability: 536.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF00046;PF04618;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06968_175202-181837' '(at4g16780 : 255.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 154.0) no description available & (gnl|cdd|68199 : 82.5) no description available & (reliability: 510.0) & (original description: Putative HAT4, Description = HAT4, PFAM = PF04618;PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07346_193487-201772' '(at5g02030 : 289.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 155.0) no description available & (gnl|cdd|70974 : 130.0) no description available & (reliability: 578.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07393_123381-129088' '(at5g03790 : 163.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 326.0) & (original description: Putative BnaAnng00780D, Description = BnaAnng00780D protein, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07451_183162-187814' '(at3g18010 : 187.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.; WUSCHEL related homeobox 1 (WOX1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 2 (TAIR:AT5G59340.1); Has 587 Blast hits to 587 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 587; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ybv1|wus_antma : 96.7) Protein WUSCHEL (Protein ROSULATA) - Antirrhinum majus (Garden snapdragon) & (reliability: 374.0) & (original description: Putative WOX1, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07790_96748-103449' '(at4g21750 : 1127.0) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.; MERISTEM LAYER 1 (ATML1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 213.0) no description available & (reliability: 2254.0) & (original description: Putative ATML1, Description = Homeobox-leucine zipper protein MERISTEM L1, PFAM = PF01852;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08263_369081-376222' '(at2g35940 : 326.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 164.0) no description available & (reliability: 652.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08473_33364-36651' '(at2g22800 : 217.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 434.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08488_446559-454580' '(at5g02030 : 298.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 159.0) no description available & (gnl|cdd|70974 : 133.0) no description available & (reliability: 596.0) & (original description: Putative rpl, Description = REPLUMLESS-like protein, PFAM = PF05920;PF07526)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08871_180659-185065' '(at2g22430 : 182.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 364.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09456_80374-123802' '(at4g16780 : 142.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|68199 : 83.2) no description available & (reliability: 284.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF04618)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09513_27856-36069' '(at1g15215 : 172.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative DTF1, Description = Chloride channel E, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09564_31851-36698' '(at5g03790 : 167.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 117.0) no description available & (reliability: 334.0) & (original description: Putative Gl, Description = Multicellular trichome development class I homeodomain-leucine zipper transcription factor, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09709_209079-216667' '(at3g18380 : 211.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 422.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf10889_107152-113250' '(at4g34610 : 345.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 180.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 690.0) & (original description: Putative BLH6, Description = BEL1-like homeodomain protein 6, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf11552_364333-379020' '(at1g28420 : 1026.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2052.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF15612;PF15613;PF02791;PF00046;PF05066)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf12320_141031-149559' '(at4g03250 : 202.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PGSC0003DMG400031247, Description = Homeobox protein NANOG, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf12526_50840-54728' '(at4g35550 : 153.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative wox13, Description = WOX13 protein, PFAM = PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf14805_223452-227112' '(at3g01470 : 137.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 274.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf15373_5696-12350' '(at5g25220 : 392.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 381.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 162.0) no description available & (reliability: 784.0) & (original description: Putative LET12, Description = Homeobox protein knotted-1-like LET12, PFAM = PF03791;PF05920;PF03789;PF03790)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf15994_64105-68281' '(at4g32980 : 300.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 117.0) no description available & (gnl|cdd|70974 : 106.0) no description available & (reliability: 600.0) & (original description: Putative BL4, Description = Bell-like homeodomain protein 4, PFAM = PF07526;PF05920)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf17122_36132-39128' '(at2g46680 : 110.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 103.0) no description available & (reliability: 220.0) & (original description: Putative HD, Description = Homeobox-leucine zipper protein, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf21935_3674-55656' '(at5g25220 : 379.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 369.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 162.0) no description available & (reliability: 758.0) & (original description: Putative HOS58, Description = Homeobox protein knotted-1-like 2, PFAM = PF05920;PF03790;PF03791)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf22883_15566-19873' '(at2g22430 : 187.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 374.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf30092_16869-21004' '(at4g16780 : 203.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 147.0) no description available & (reliability: 406.0) & (original description: Putative HAT1, Description = Homeobox-leucine zipper protein HAT1, PFAM = PF00046;PF04618;PF02183)' T
'27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf38556_33242-42464' '(at5g02030 : 283.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 158.0) no description available & (gnl|cdd|70974 : 125.0) no description available & (reliability: 566.0) & (original description: Putative rpl, Description = REPLUMLESS-like protein, PFAM = PF05920;PF07526)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold7577_51496-54401' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold7950_33568-39540' '(at5g16820 : 338.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 214.0) no description available & (gnl|cdd|84779 : 212.0) no description available & (reliability: 632.0) & (original description: Putative HSFA1B, Description = Heat stress transcription factor A-1b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold13032_39178-42684' '(at4g18880 : 199.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|84779 : 157.0) no description available & (gnl|cdd|35846 : 156.0) no description available & (reliability: 390.0) & (original description: Putative HSF3, Description = HSF domain class transcription factor, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold43679_1559-7314' '(at4g13980 : 425.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 180.0) no description available & (gnl|cdd|84779 : 160.0) no description available & (reliability: 850.0) & (original description: Putative HSFA5, Description = Heat stress transcription factor A-5, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold61947_4089-8936' '(at5g16820 : 333.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 220.0) no description available & (gnl|cdd|35846 : 208.0) no description available & (reliability: 652.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold99065_1374-4156' '(at1g46264 : 272.0) Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.; heat shock transcription factor B4 (HSFB4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: asymmetric cell division; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 4 (TAIR:AT4G36990.1); Has 2061 Blast hits to 2048 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 468; Plants - 781; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (gnl|cdd|35846 : 150.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 544.0) & (original description: Putative HSFB4, Description = Heat stress transcription factor B-4, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold115_804293-809033' '(at4g11660 : 115.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 114.0) no description available & (gnl|cdd|84779 : 113.0) no description available & (reliability: 224.0) & (original description: Putative HSF, Description = Heat shock transcription factor, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold3798_88232-92015' '(at3g22830 : 329.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 198.0) no description available & (gnl|cdd|84779 : 168.0) no description available & (reliability: 658.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold7064_2031-5920' '(at2g26150 : 241.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 169.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 482.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00003675ctg002_9845-13332' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 109.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00024619ctg004_12400-15945' '(gnl|cdd|84779 : 120.0) no description available & (gnl|cdd|35846 : 114.0) no description available & (at5g03720 : 108.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00039188ctg013_4765-8524' '(at2g26150 : 246.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 170.0) no description available & (gnl|cdd|84779 : 151.0) no description available & (reliability: 492.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00054110ctg000_1121-4949' '(at3g22830 : 332.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 199.0) no description available & (gnl|cdd|84779 : 168.0) no description available & (reliability: 664.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101ctg15726_1-4008' '(gnl|cdd|35846 : 123.0) no description available & (at4g11660 : 122.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|84779 : 119.0) no description available & (reliability: 240.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00073_465639-468954' '(at4g18880 : 307.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 176.0) no description available & (gnl|cdd|84779 : 167.0) no description available & (reliability: 562.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00163_1272825-1275730' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00868_1383-4529' '(at1g46264 : 277.0) Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.; heat shock transcription factor B4 (HSFB4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: asymmetric cell division; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 4 (TAIR:AT4G36990.1); Has 2061 Blast hits to 2048 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 468; Plants - 781; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 154.0) no description available & (reliability: 554.0) & (original description: Putative HSFB4, Description = Heat stress transcription factor B-4, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01111_547839-556882' '(at1g12800 : 605.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (gnl|cdd|81998 : 111.0) no description available & (reliability: 1210.0) & (original description: Putative HSF8, Description = Putative heat shock transcription factor 8, PFAM = PF00575)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01305_158762-172103' '(at1g32330 : 318.0) Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2.; heat shock transcription factor A1D (HSFA1D); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2363 Blast hits to 2344 proteins in 251 species: Archae - 0; Bacteria - 10; Metazoa - 417; Fungi - 488; Plants - 855; Viruses - 2; Other Eukaryotes - 591 (source: NCBI BLink). & (gnl|cdd|84779 : 231.0) no description available & (gnl|cdd|35846 : 219.0) no description available & (reliability: 636.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01529_447108-465886' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 107.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01777_284012-288052' '(at2g26150 : 335.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 209.0) no description available & (gnl|cdd|35846 : 204.0) no description available & (reliability: 670.0) & (original description: Putative HSF30, Description = Heat shock factor protein HSF30, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03252_207130-209864' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 128.0) no description available & (gnl|cdd|35846 : 124.0) no description available & (reliability: 280.0) & (original description: Putative HSF12, Description = HSF12, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03438_260536-263896' '(at2g41690 : 182.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B3 (HSFB3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleus; EXPRESSED IN: inflorescence meristem, leaf whorl, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 329; Fungi - 465; Plants - 775; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (gnl|cdd|84779 : 131.0) no description available & (gnl|cdd|35846 : 130.0) no description available & (reliability: 364.0) & (original description: Putative HSF5, Description = Heat shock transcription factor, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03488_186097-192654' '(at4g13980 : 435.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 179.0) no description available & (gnl|cdd|84779 : 158.0) no description available & (reliability: 870.0) & (original description: Putative HSFA5, Description = Heat stress transcription factor A-5, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03518_487612-495873' '(at1g67970 : 215.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A8 (HSFA8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2085 Blast hits to 2073 proteins in 225 species: Archae - 0; Bacteria - 3; Metazoa - 333; Fungi - 465; Plants - 781; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 430.0) & (original description: Putative HSFA8, Description = Heat stress transcription factor A-8, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03662_39836-44558' '(at5g16820 : 339.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 229.0) no description available & (gnl|cdd|35846 : 213.0) no description available & (reliability: 670.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03923_321573-325374' '(at3g22830 : 318.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 195.0) no description available & (gnl|cdd|84779 : 165.0) no description available & (reliability: 636.0) & (original description: Putative HSFA2B, Description = Heat stress transcription factor A-2b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04096_617112-620203' '(at4g11660 : 250.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 486.0) & (original description: Putative HSFB2A, Description = Heat stress transcription factor B-2a, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04122_729703-732902' '(gnl|cdd|84779 : 110.0) no description available & (at5g03720 : 102.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 101.0) no description available & (reliability: 204.0) & (original description: Putative HS1, Description = Heat shock transcription factor A3, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04315_74015-94853' '(at1g12800 : 616.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (gnl|cdd|81998 : 110.0) no description available & (reliability: 1232.0) & (original description: Putative HSF8, Description = Putative heat shock transcription factor 8, PFAM = PF00575)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04899_98145-103240' '(at5g62020 : 127.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|35846 : 119.0) no description available & (gnl|cdd|84779 : 118.0) no description available & (reliability: 254.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf05948_431223-434917' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 127.0) no description available & (gnl|cdd|35846 : 121.0) no description available & (reliability: 280.0) & (original description: Putative HSF1, Description = Heat stress transcription factor A-2, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf06769_147645-151845' '(at5g03720 : 289.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 173.0) no description available & (gnl|cdd|84779 : 161.0) no description available & (reliability: 578.0) & (original description: Putative HSFA3, Description = Heat stress transcription factor A-3, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08149_58066-66518' '(at5g16820 : 345.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 205.0) no description available & (gnl|cdd|84779 : 198.0) no description available & (reliability: 644.0) & (original description: Putative HSFA1, Description = Heat stress transcription factor A-1, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08341_1079823-1083812' '(at3g24520 : 259.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor C1 (HSFC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2; Bacteria - 4; Metazoa - 382; Fungi - 481; Plants - 788; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (gnl|cdd|35846 : 147.0) no description available & (gnl|cdd|84779 : 143.0) no description available & (reliability: 518.0) & (original description: Putative HSF7, Description = HSF domain class transcription factor, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08470_489628-513385' '(at3g22830 : 321.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 194.0) no description available & (gnl|cdd|84779 : 173.0) no description available & (reliability: 642.0) & (original description: Putative HSFA2B, Description = Heat stress transcription factor A-2b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf10940_588883-593109' '(at3g22830 : 311.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 191.0) no description available & (gnl|cdd|84779 : 172.0) no description available & (reliability: 622.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf11512_237005-240764' '(at2g26150 : 236.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 164.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 472.0) & (original description: Putative Hsf1, Description = Heat shock factor, PFAM = PF00447)' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf15538_30780-34760' '(at4g17600 : 249.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative Lil3:1, Description = AT4g17600/dl4835w, PFAM = )' T
'27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf16530_66149-77564' '(at4g17600 : 218.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold7839_11003-16201' '(at1g22130 : 153.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (q7xun2|mad17_orysa : 93.6) MADS-box transcription factor 17 (OsMADS17) (NMADS3) (RMADS213) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold8679_1-12738' '(at3g49400 : 647.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1294.0) & (original description: Putative At3g49400, Description = Transducin/WD40 domain-containing protein, PFAM = PF12657;PF00400;PF00400)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold12362_22613-29416' '(at2g45660 : 196.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 177.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 392.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold14034_6207-22255' '(at5g65060 : 124.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q6eu39|mads6_orysa : 123.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (reliability: 248.0) & (original description: Putative C11, Description = FLC, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold14528_5024-12333' '(at3g57390 : 153.0) encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.; AGAMOUS-like 18 (AGL18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 (TAIR:AT5G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39295|agl15_brana : 151.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.3) no description available & (reliability: 306.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold24577_20910-29089' '(at1g22130 : 130.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 96.7) no description available & (gnl|cdd|35238 : 83.5) no description available & (q6q9i2|mad15_orysa : 80.1) MADS-box transcription factor 15 (OsMADS15) (Protein APETALA1-like A) (FDRMADS3) (RMADS215) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative m1, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold24696_1-4721' '(at1g69120 : 212.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q42429|agl8_soltu : 212.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 394.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold33296_4670-19559' '(q6ep49|mad27_orysa : 207.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 198.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 92.4) no description available & (reliability: 396.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold34634_9147-18983' '(at1g18750 : 122.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 65 (AGL65); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative mads1, Description = MIKC* MADS-box transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold39889_1629-12476' '(at4g22950 : 181.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (q9xj60|mad50_orysa : 181.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 362.0) & (original description: Putative AGL19, Description = Agamous-like MADS-box protein AGL19, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold39890_923-14520' '(at2g45660 : 167.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 160.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 334.0) & (original description: Putative AGL42, Description = AGL42, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold47646_1663-5867' '(at2g45660 : 82.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative soc1, Description = MADS-box protein SOC1, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold58601_8164-10886' '(at5g60440 : 167.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 334.0) & (original description: Putative BnaA01g25970D, Description = BnaA01g25970D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold64663_68-9078' '(q6ep49|mad27_orysa : 175.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 160.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold80622_5239-7040' '(at5g60440 : 110.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 101.0) no description available & (q6z6w2|mad57_orysa : 82.0) MADS-box transcription factor 57 (OsMADS57) - Oryza sativa (Rice) & (reliability: 220.0) & (original description: Putative AGL62, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold87_499581-502258' '(gnl|cdd|29020 : 91.3) no description available & (at5g60440 : 88.6) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400005119, Description = Mads box protein, putative, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold87_503002-505600' '(at5g60440 : 179.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 98.7) no description available & (gnl|cdd|35238 : 85.0) no description available & (reliability: 358.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold245_808428-879403' '(at5g62165 : 184.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 123.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (reliability: 368.0) & (original description: Putative DAL19, Description = DAL19 protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold319_129291-142577' '(at3g49400 : 609.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1218.0) & (original description: Putative PGSC0003DMG400005917, Description = Transducin/WD40 repeat protein, PFAM = PF12657;PF00400;PF00400)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold431_464811-474647' '(at2g03060 : 147.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold468_87691-108622' '(q6ep49|mad27_orysa : 276.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 255.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 99.7) no description available & (reliability: 510.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold574_544496-569091' '(at3g02310 : 246.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 229.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 103.0) no description available & (reliability: 476.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1173_283057-300944' '(q6ep49|mad27_orysa : 236.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 229.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 458.0) & (original description: Putative ANR1, Description = MADS-box transcription factor ANR1, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1221_418716-427104' '(q03489|agl9_pethy : 384.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (at1g24260 : 298.0) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.; SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1). & (gnl|cdd|29020 : 132.0) no description available & (gnl|cdd|35238 : 114.0) no description available & (reliability: 596.0) & (original description: Putative FBP2, Description = Agamous-like MADS-box protein AGL9 homolog, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1489_115615-126517' '(at4g09960 : 233.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 226.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 466.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1501_416140-433824' '(at2g45660 : 183.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 163.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 97.0) no description available & (reliability: 366.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1614_72713-81544' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 394.0) & (original description: Putative AGL24, Description = MADS-box protein AGL24, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2090_34411-50459' '(q40700|mads1_orysa : 122.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65050 : 117.0) Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function.; AGAMOUS-like 31 (AGL31); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 87.4) no description available & (reliability: 234.0) & (original description: Putative C11, Description = FLC, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2462_156771-160270' '(at5g48670 : 171.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 101.0) no description available & (gnl|cdd|29021 : 98.4) no description available & (reliability: 342.0) & (original description: Putative AGL45, Description = Agamous-like MADS-box protein AGL45, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2914_184685-211831' '(q9xj60|mad50_orysa : 165.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (at4g22950 : 164.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 82.3) no description available & (reliability: 328.0) & (original description: Putative SOC1, Description = SOC1, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold3426_85282-87962' '(gnl|cdd|29021 : 83.8) no description available & (at3g05860 : 81.3) MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 46 (TAIR:AT2G28700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PHE1, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold3748_208508-225552' '(at5g62165 : 112.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 93.2) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative soc1, Description = SOC1-like protein, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold5334_85932-98788' '(at2g45650 : 133.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (q6eu39|mads6_orysa : 131.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (gnl|cdd|35238 : 88.1) no description available & (reliability: 266.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold6423_25441-33620' '(at1g22130 : 138.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 95.6) no description available & (gnl|cdd|35238 : 84.3) no description available & (q41276|ap1_sinal : 80.1) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 276.0) & (original description: Putative AGL67, Description = Agamous-like 67, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold6542_836-19979' '(q39685|cmb1_diaca : 239.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 225.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 99.3) no description available & (reliability: 450.0) & (original description: Putative AGL3, Description = Agamous-like MADS-box protein AGL3, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold7006_25982-29101' '(at2g45660 : 108.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative SOC1, Description = SOC1-like protein, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044ctg25948687_1-3120' '(at1g69120 : 210.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 207.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 390.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00000664ctg001_1-2260' '(gnl|cdd|29020 : 96.7) no description available & (at5g60440 : 94.4) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 82.3) no description available & (reliability: 188.8) & (original description: Putative BnaC04g37430D, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00004683ctg023_10644-13563' '(at4g09960 : 112.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 103.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (reliability: 224.0) & (original description: Putative ag, Description = AGAMOUS-like protein, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00005051ctg009_5566-7851' '(q6ep49|mad27_orysa : 134.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 123.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00005475ctg013_41067-51767' '(q42429|agl8_soltu : 301.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 242.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 442.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00011657ctg014_2910-6670' '(q6ep49|mad27_orysa : 114.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 111.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative AGL6, Description = MADS-box transcription factor 27, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00012150ctg008_4463-14941' '(q42429|agl8_soltu : 282.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 248.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 96.6) no description available & (reliability: 450.0) & (original description: Putative TDR4, Description = Agamous-like MADS-box protein AGL8 homolog, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00013130ctg001_1756-10809' '(q6ep49|mad27_orysa : 147.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 143.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00016312ctg007_950-6993' '(q39685|cmb1_diaca : 172.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 152.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 103.0) no description available & (reliability: 304.0) & (original description: Putative 37135, Description = Sepallata 1, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00017063ctg000_7985-10633' '(at5g60440 : 192.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 98.7) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 384.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00020832ctg004_979-6044' '(q39685|cmb1_diaca : 145.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 130.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 92.1) no description available & (reliability: 260.0) & (original description: Putative m2, Description = MADS-box transcription factor, PFAM = PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00022695ctg008_8057-10710' '(at5g60440 : 171.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 102.0) no description available & (gnl|cdd|35238 : 90.8) no description available & (reliability: 342.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00026136ctg011_3007-5665' '(gnl|cdd|29020 : 99.4) no description available & (at5g60440 : 95.9) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 87.0) no description available & (reliability: 191.8) & (original description: Putative PGSC0003DMG400039595, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00026669ctg008_1-1250' '(at5g60440 : 100.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400005131, Description = Transcription factor, MADS-box, PFAM = )' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00029554ctg007_1-18650' '(at3g02310 : 269.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 256.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 526.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00029654ctg000_1-14518' '(at2g45660 : 159.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 156.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 120.0) no description available & (gnl|cdd|35238 : 82.3) no description available & (reliability: 318.0) & (original description: Putative AGL72, Description = MADS-box protein AGL72, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00037427ctg002_3036-14769' '(q6ep49|mad27_orysa : 140.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 134.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 268.0) & (original description: Putative dal2, Description = MADS-box transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00061_45797-53186' '(q6eu39|mads6_orysa : 262.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (at2g45650 : 261.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 110.0) no description available & (reliability: 522.0) & (original description: Putative MADS6, Description = MADS-box transcription factor 6, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00069_1260137-1286498' '(q6ep49|mad27_orysa : 247.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 237.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 474.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00276_242926-252850' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 120.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 386.0) & (original description: Putative M211, Description = MPF2-like, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00304_773955-787368' '(at3g49400 : 578.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1156.0) & (original description: Putative TCM_015503, Description = Transducin/WD40 repeat-like superfamily protein, putative, PFAM = PF12657;PF00400;PF00400)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00320_174212-184967' '(at4g09960 : 239.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 227.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 93.1) no description available & (reliability: 478.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00337_426072-433575' '(q39685|cmb1_diaca : 270.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 260.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 135.0) no description available & (gnl|cdd|35238 : 110.0) no description available & (reliability: 512.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00366_313943-323706' '(q03489|agl9_pethy : 409.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (at1g24260 : 300.0) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.; SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1). & (gnl|cdd|29020 : 132.0) no description available & (gnl|cdd|35238 : 113.0) no description available & (reliability: 600.0) & (original description: Putative FBP2, Description = Agamous-like MADS-box protein AGL9 homolog, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00397_1171889-1183575' '(at2g22540 : 150.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 136.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 80.8) no description available & (reliability: 284.0) & (original description: Putative S21, Description = MADS-box protein STMADS11 subfamily, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00397_1172287-1183584' '(at2g22540 : 140.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 132.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (reliability: 270.0) & (original description: Putative inco, Description = Incomposita protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00490_227602-240521' '(at4g22950 : 175.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 86.2) no description available & (reliability: 350.0) & (original description: Putative AGL19, Description = Agamous-like MADS-box protein AGL19, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00508_1025054-1066460' '(at1g77080 : 115.0) MADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering.; K-box region and MADS-box transcription factor family protein ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, negative regulation of flower development, regulation of transcription, DNA-dependent, regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65060.1); Has 6885 Blast hits to 6879 proteins in 856 species: Archae - 0; Bacteria - 1; Metazoa - 618; Fungi - 302; Plants - 5888; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (q40700|mads1_orysa : 107.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (gnl|cdd|29020 : 100.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 230.0) & (original description: Putative AGL27, Description = Agamous-like MADS-box protein AGL27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00571_608169-619420' '(at5g60440 : 104.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 102.0) no description available & (gnl|cdd|35238 : 83.1) no description available & (reliability: 208.0) & (original description: Putative BnaC04g37430D, Description = BnaC04g37430D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00589_144316-197098' '(q6ep49|mad27_orysa : 266.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 243.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|29020 : 134.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 486.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00627_9818-65927' '(at5g62165 : 180.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 152.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (gnl|cdd|35238 : 84.7) no description available & (reliability: 360.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00837_319587-322093' '(at2g24840 : 90.9) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|29020 : 89.8) no description available & (reliability: 181.8) & (original description: Putative PGSC0003DMG400042688, Description = Agamous-like MADS-box protein AGL62, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00953_451072-453719' '(at5g60440 : 174.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 104.0) no description available & (gnl|cdd|35238 : 91.2) no description available & (reliability: 348.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01020_292488-295069' '(at2g24840 : 80.9) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400037384, Description = , PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01124_700328-702930' '(at5g60440 : 139.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 101.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 278.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01143_401346-411119' '(q39685|cmb1_diaca : 257.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 231.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 456.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01143_406189-411078' '(at3g02310 : 126.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q39685|cmb1_diaca : 125.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|29020 : 111.0) no description available & (gnl|cdd|35238 : 85.8) no description available & (reliability: 250.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01226_242833-250142' '(q39295|agl15_brana : 135.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (at5g13790 : 132.0) AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.; AGAMOUS-like 15 (AGL15); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 (TAIR:AT3G57390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.7) no description available & (reliability: 264.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01252_123161-131340' '(at1g22130 : 130.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 96.4) no description available & (gnl|cdd|35238 : 82.3) no description available & (q6q9i2|mad15_orysa : 81.3) MADS-box transcription factor 15 (OsMADS15) (Protein APETALA1-like A) (FDRMADS3) (RMADS215) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative m7, Description = AGAMOUS-like protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01310_422142-446535' '(q39685|cmb1_diaca : 249.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 231.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 129.0) no description available & (gnl|cdd|35238 : 105.0) no description available & (reliability: 462.0) & (original description: Putative MADS8, Description = MADS-box transcription factor 8, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01310_459378-475076' '(q41276|ap1_sinal : 232.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 223.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 428.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01327_151046-182034' '(q40700|mads1_orysa : 137.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65070 : 134.0) Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.; MADS AFFECTING FLOWERING 4 (MAF4); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65080.1). & (gnl|cdd|29020 : 109.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 268.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02073_1014291-1020204' '(at4g09960 : 244.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 231.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 488.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02151_124111-141293' '(q41276|ap1_sinal : 246.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 238.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 474.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02194_125867-152437' '(q6ep49|mad27_orysa : 264.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 243.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 130.0) no description available & (gnl|cdd|35238 : 99.3) no description available & (reliability: 486.0) & (original description: Putative AGL21, Description = Agamous-like MADS-box protein AGL21, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02348_1239066-1276667' '(q6ep49|mad27_orysa : 243.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 224.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|29020 : 128.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 448.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02361_253155-270078' '(at2g45660 : 157.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 157.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 84.3) no description available & (reliability: 314.0) & (original description: Putative dal3, Description = MADS-box transcription factor, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02452_676861-690023' '(q9ate5|fbp24_pethy : 333.0) MADS-box protein FBP24 (Floral-binding protein 24) - Petunia hybrida (Petunia) & (at5g23260 : 174.0) Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA.; TRANSPARENT TESTA16 (TT16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of cell shape, regulation of proanthocyanidin biosynthetic process, seed development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 (TAIR:AT5G13790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 128.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 348.0) & (original description: Putative FBP24, Description = MADS-box protein FBP24, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02909_370801-374366' '(at5g48670 : 124.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 99.7) no description available & (gnl|cdd|29021 : 93.4) no description available & (reliability: 248.0) & (original description: Putative PHE1, Description = Agamous-like MADS-box protein AGL80, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03048_626173-628712' '(at2g24840 : 81.3) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400037384, Description = BnaC04g37430D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03171_108718-111428' '(at5g48670 : 196.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 104.0) no description available & (gnl|cdd|29021 : 100.0) no description available & (reliability: 392.0) & (original description: Putative PHE2, Description = Pheres2, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03273_106759-118569' '(at1g71692 : 229.0) Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.; AGAMOUS-like 12 (AGL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, root development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.1); Has 6551 Blast hits to 6549 proteins in 840 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 300; Plants - 5564; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (q8l887|mad26_orysa : 214.0) MADS-box transcription factor 26 (OsMADS26) (FDRMADS3) (RMADS220) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 94.7) no description available & (reliability: 458.0) & (original description: Putative AGL12, Description = Agamous-like MADS-box protein AGL12, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03350_278998-293185' '(at4g09960 : 219.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 203.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 438.0) & (original description: Putative fbp11, Description = Fbp11 protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03376_325458-328026' '(at5g60440 : 100.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400043633, Description = Transcription factor, MADS-box, PFAM = )' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03376_325476-327966' '(at5g60440 : 105.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400005131, Description = Mads box protein, putative, PFAM = )' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03488_1200493-1216784' '(at5g65060 : 134.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q7xun2|mad17_orysa : 133.0) MADS-box transcription factor 17 (OsMADS17) (NMADS3) (RMADS213) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 268.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04021_194317-232245' '(at2g45660 : 179.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 160.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (reliability: 358.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04053_4902-7899' '(at5g60440 : 102.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 95.6) no description available & (gnl|cdd|35238 : 82.0) no description available & (reliability: 204.0) & (original description: Putative AGL29, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04995_963953-968510' '(at1g22130 : 167.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 96.6) no description available & (q8ru31|mad21_orysa : 93.6) MADS-box transcription factor 21 (OsMADS21) (RMADS207) - Oryza sativa (Rice) & (reliability: 334.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05483_759579-774893' '(q6ep49|mad27_orysa : 209.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 197.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 116.0) no description available & (gnl|cdd|35238 : 93.9) no description available & (reliability: 394.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05552_510506-612765' '(at5g62165 : 176.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 168.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 93.9) no description available & (reliability: 352.0) & (original description: Putative AGL42, Description = MADS-box protein AGL42, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05552_594249-598120' '(gnl|cdd|29020 : 122.0) no description available & (at2g45660 : 116.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 115.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|35238 : 92.7) no description available & (reliability: 232.0) & (original description: Putative dal3, Description = Suppressor of overexpression of constans 1, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05588_1257154-1273727' '(at3g49400 : 655.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1310.0) & (original description: Putative PGSC0003DMG400005917, Description = Transducin/WD40 repeat protein, PFAM = PF00400;PF00400;PF12657)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05618_522549-546653' '(at3g02310 : 221.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (o65874|mtf1_pea : 215.0) MADS-box transcription factor 1 - Pisum sativum (Garden pea) & (gnl|cdd|29020 : 123.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 442.0) & (original description: Putative otg7, Description = MADS box protein DOMADS1, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05620_225763-264338' '(q39685|cmb1_diaca : 265.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at5g15800 : 239.0) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.; SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 478.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05620_225766-261813' '(q39685|cmb1_diaca : 260.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 249.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 496.0) & (original description: Putative 37135, Description = Developmental protein SEPALLATA 1, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05824_797119-799841' '(at5g60440 : 167.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 334.0) & (original description: Putative BnaA01g25970D, Description = BnaA01g25970D protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06076_76246-83178' '(q42429|agl8_soltu : 239.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 232.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 430.0) & (original description: Putative m4, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06076_76859-81626' '(at1g69120 : 179.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 174.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 104.0) no description available & (reliability: 332.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06094_2350-6956' '(at1g77980 : 106.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 66 (AGL66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 104 (TAIR:AT1G22130.1); Has 6165 Blast hits to 6165 proteins in 753 species: Archae - 0; Bacteria - 2; Metazoa - 622; Fungi - 302; Plants - 5159; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|29020 : 90.2) no description available & (reliability: 212.0) & (original description: Putative m3, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06094_2377-6890' '(at1g77980 : 103.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 66 (AGL66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 104 (TAIR:AT1G22130.1); Has 6165 Blast hits to 6165 proteins in 753 species: Archae - 0; Bacteria - 2; Metazoa - 622; Fungi - 302; Plants - 5159; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|29020 : 90.2) no description available & (reliability: 206.0) & (original description: Putative m3, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06156_498918-509772' '(at5g60440 : 149.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 298.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06493_151433-160782' '(at1g69120 : 217.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 216.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 394.0) & (original description: Putative AGL8, Description = Agamous-like MADS-box protein AGL8, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06517_4919-44759' '(q6ep49|mad27_orysa : 134.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at2g14210 : 131.0) MADS box gene, transcription factor; AGAMOUS-like 44 (AGL44); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to nutrient, lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7244 Blast hits to 7231 proteins in 902 species: Archae - 0; Bacteria - 10; Metazoa - 640; Fungi - 309; Plants - 6146; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 94.3) no description available & (reliability: 262.0) & (original description: Putative MADS26, Description = MADS transcription factor, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06560_87943-96831' '(q42429|agl8_soltu : 236.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 235.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 454.0) & (original description: Putative FUL1, Description = Fruitful 1, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06825_486685-505912' '(q6eu39|mads6_orysa : 132.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (at2g45650 : 130.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 260.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf07207_12768-15202' '(gnl|cdd|29020 : 99.8) no description available & (at2g24840 : 96.7) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf07242_583004-588201' '(at1g22130 : 153.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 97.0) no description available & (o65874|mtf1_pea : 95.9) MADS-box transcription factor 1 - Pisum sativum (Garden pea) & (reliability: 306.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf09778_81224-129574' '(at2g45660 : 167.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 144.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 91.2) no description available & (reliability: 334.0) & (original description: Putative TDR3, Description = TDR3 protein, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf09778_81230-130230' '(at2g45660 : 190.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 97.4) no description available & (reliability: 380.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf10287_208676-211200' '(gnl|cdd|29020 : 89.0) no description available & (at5g60440 : 85.5) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400044761, Description = MADS-box protein AGL74, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf13572_15497-37083' '(at3g02310 : 240.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 231.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 468.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf16022_302844-319443' '(q9xj60|mad50_orysa : 184.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (at4g22950 : 182.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 94.7) no description available & (reliability: 364.0) & (original description: Putative MADS50, Description = MADS-box transcription factor 50, PFAM = PF00319;PF01486)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf18182_49991-61025' '(at2g03060 : 145.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T
'27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf31210_6171-10778' '(q6ep49|mad27_orysa : 127.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 119.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold513_1-21873' '(at2g32460 : 211.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 204.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 422.0) & (original description: Putative mybAS2, Description = Anther-specific myb-related protein 2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold964_2527-6388' '(at5g15310 : 285.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 204.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 198.0) no description available & (reliability: 570.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold1726_387-9169' '(at1g09710 : 211.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 422.0) & (original description: Putative MTR_8g024690, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold2304_48638-52566' '(at1g16490 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 58 (MYB58); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1); Has 8863 Blast hits to 8152 proteins in 473 species: Archae - 0; Bacteria - 3; Metazoa - 752; Fungi - 456; Plants - 5848; Viruses - 6; Other Eukaryotes - 1798 (source: NCBI BLink). & (p20024|myb1_maize : 208.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 428.0) & (original description: Putative myb1, Description = Myb-related transcription factor LBM3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold2366_67543-71228' '(at5g62470 : 284.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (p20024|myb1_maize : 182.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 568.0) & (original description: Putative mybys, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold5538_42426-46288' '(at3g60460 : 211.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 145.0) no description available & (p93417|gam1_orysa : 133.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 422.0) & (original description: Putative B25, Description = Putative uncharacterized protein B25, PFAM = PF13921;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold8619_1-2665' '(at2g31180 : 167.0) Member of the R2R3 factor gene family.; myb domain protein 14 (MYB14); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 8955 Blast hits to 8193 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 463; Plants - 5874; Viruses - 6; Other Eukaryotes - 1793 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 166.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 154.0) no description available & (reliability: 334.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold9845_1-3311' '(at2g36890 : 228.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = Transcription factor RAX3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold10768_44858-47731' '(at4g37260 : 176.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 155.0) no description available & (p93417|gam1_orysa : 107.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 352.0) & (original description: Putative myb11, Description = R2r3-myb transcription factor, putative, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold11745_8078-11629' '(at4g39250 : 101.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative fsm1, Description = SANT/MYB domain protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold13346_40332-42804' '(at2g37630 : 159.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 111.0) no description available & (p93417|gam1_orysa : 90.1) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 318.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold14289_8903-12685' '(at3g53200 : 157.0) Member of the R2R3 factor gene family.; myb domain protein 27 (MYB27); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.1); Has 8985 Blast hits to 8213 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 826; Fungi - 465; Plants - 5890; Viruses - 5; Other Eukaryotes - 1799 (source: NCBI BLink). & (q4jl76|myba2_orysa : 156.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|35271 : 149.0) no description available & (reliability: 314.0) & (original description: Putative MYB20, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold15687_26671-30481' '(at5g57620 : 225.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (p20025|myb38_maize : 171.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 169.0) no description available & (reliability: 450.0) & (original description: Putative BLIND, Description = BLIND, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold16129_34440-37605' '(at3g12720 : 238.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 476.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold17163_17054-21502' '(at2g02060 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA02g21100D, Description = BnaA02g21100D protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold18366_31687-35561' '(at2g47460 : 201.0) "MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. " The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots.; myb domain protein 12 (MYB12); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 11 (TAIR:AT3G62610.1); Has 8833 Blast hits to 8133 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 423; Plants - 5965; Viruses - 6; Other Eukaryotes - 1653 (source: NCBI BLink). & (p27898|mybp_maize : 200.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 155.0) no description available & (reliability: 402.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold18801_1-5735' '(at5g42630 : 182.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative KAN4, Description = Probable transcription factor KAN4, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold19798_29343-32705' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold19841_1-5043' '(at5g42630 : 173.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold20241_1-3229' '(at5g16770 : 228.0) Member of the R2R3 factor gene family.; myb domain protein 9 (MYB9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 107 (TAIR:AT3G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 456.0) & (original description: Putative MYB101, Description = Transcription factor MYB101, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold20346_33549-40646' '(at3g55730 : 276.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 157.0) no description available & (q4jl76|myba2_orysa : 108.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.6) no description available & (reliability: 552.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold22028_9440-12015' '(q7xbh4|myb4_orysa : 154.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 152.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 152.0) no description available & (reliability: 304.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold22028_9473-12135' '(at4g21440 : 151.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 147.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 146.0) no description available & (reliability: 302.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold23195_18934-23011' '(at1g25360 : 507.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1014.0) & (original description: Putative At1g25360, Description = Putative ovule protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold24378_4319-8643' '(at3g60460 : 198.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 130.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 80.0) no description available & (reliability: 396.0) & (original description: Putative MYB96, Description = MYB-related transcription factor, PFAM = PF13921;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold25125_3593-7191' '(at5g62470 : 290.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 193.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 580.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold25829_309-6767' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold29757_14037-25046' '(at3g18100 : 454.0) Member of the R2R3 transcription factor gene family.; myb domain protein 4r1 (MYB4R1); CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.2). & (gnl|cdd|35272 : 159.0) no description available & (reliability: 908.0) & (original description: Putative BnaC01g12000D, Description = BnaC01g12000D protein, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold32376_18581-22711' '(at2g32460 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 209.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 428.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold32749_15372-23363' '(at5g02320 : 365.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 98.9) no description available & (reliability: 730.0) & (original description: Putative myb, Description = MYB transcription factor R3 type, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold33827_3950-14406' '(at1g34670 : 273.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 202.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 195.0) no description available & (reliability: 546.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold39953_12875-16470' '(at3g12720 : 242.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 484.0) & (original description: Putative MYB64, Description = MYB transcription factor MYB64, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold40600_6679-9458' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold40784_7689-11797' '(at3g08500 : 220.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 187.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 440.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold42212_4316-8676' '(at1g66230 : 262.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 249.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 524.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold47610_12750-16092' '(at5g41020 : 340.0) myb family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35274 : 161.0) no description available & (reliability: 680.0) & (original description: Putative BnaC04g33270D, Description = BnaC04g33270D protein, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold55471_1758-7300' '(at1g07540 : 356.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative TRP5, Description = Telomere repeat-binding protein 5, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold57105_3611-7117' '(at5g14340 : 218.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 202.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 436.0) & (original description: Putative MYB48, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold58229_7597-10685' '(at5g67300 : 229.0) Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.; myb domain protein r1 (MYBR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 77 (TAIR:AT3G50060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 88.9) no description available & (reliability: 458.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold58750_1-3231' '(at1g09540 : 264.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 213.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 528.0) & (original description: Putative MYB83, Description = MYB transcription factor 83, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold61643_5223-11331' '(at2g42660 : 94.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold61679_8585-11441' '(at4g37260 : 221.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p93417|gam1_orysa : 113.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 91.2) no description available & (reliability: 442.0) & (original description: Putative B19, Description = Myb-like protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold64987_7256-10558' '(at4g21440 : 290.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 580.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold73096_4005-7184' '(at4g37780 : 179.0) "encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family."; myb domain protein 87 (MYB87); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8573 Blast hits to 8093 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 622; Fungi - 441; Plants - 5850; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20025|myb38_maize : 157.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 358.0) & (original description: Putative myb, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold73103_5318-8607' '(gnl|cdd|35271 : 145.0) no description available & (at3g13890 : 143.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20027|myb3_horvu : 135.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 286.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold75062_1-3337' '(at2g36890 : 221.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 170.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 169.0) no description available & (reliability: 442.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold76744_3704-7123' '(at1g09540 : 285.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 213.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 570.0) & (original description: Putative MYB4, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold80355_605-5603' '(at1g17950 : 225.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 106.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.4) no description available & (reliability: 450.0) & (original description: Putative myb, Description = MYB transcription factor R2R3 type, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold80767_1668-6548' '(at1g66230 : 253.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 241.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 506.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold82528_1949-6641' '(at5g49330 : 199.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 194.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 398.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold83385_1-5079' '(at3g08500 : 221.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 180.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 165.0) no description available & (reliability: 442.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold86968_132-3494' '(p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at3g13540 : 196.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (gnl|cdd|35271 : 182.0) no description available & (reliability: 392.0) & (original description: Putative MYB8, Description = Putative R2R3 MYB protein 8, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold106083_334-3342' '(at3g47600 : 301.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 186.0) no description available & (gnl|cdd|34748 : 81.2) no description available & (reliability: 602.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold113758_82-2621' '(at4g37260 : 172.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 87.4) no description available & (reliability: 344.0) & (original description: Putative MYB1, Description = Putative R2R3 MYB protein 1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold39_1180153-1183515' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 394.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold614_2455-7271' '(at1g63910 : 238.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (gnl|cdd|35271 : 174.0) no description available & (p20027|myb3_horvu : 172.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 476.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold724_241794-244895' '(at4g13480 : 231.0) Member of the R2R3 factor gene family.; myb domain protein 79 (MYB79); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 8943 Blast hits to 8160 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 824; Fungi - 482; Plants - 5824; Viruses - 6; Other Eukaryotes - 1807 (source: NCBI BLink). & (gnl|cdd|35271 : 171.0) no description available & (q4jl76|myba2_orysa : 168.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 462.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold724_241812-244865' '(at3g24310 : 231.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (q4jl76|myba2_orysa : 169.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 462.0) & (original description: Putative MYB, Description = R2R3-MYB factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold798_20722-24645' '(at5g52260 : 187.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (p20027|myb3_horvu : 159.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 374.0) & (original description: Putative scMYB6, Description = ScMYB6 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1349_413400-426592' '(at3g18100 : 467.0) Member of the R2R3 transcription factor gene family.; myb domain protein 4r1 (MYB4R1); CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.2). & (gnl|cdd|35272 : 162.0) no description available & (reliability: 934.0) & (original description: Putative MYB96, Description = MYB transcription factor MYB96, PFAM = PF00249;PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1467_385663-389799' '(at3g13890 : 144.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 139.0) no description available & (p20027|myb3_horvu : 135.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 288.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1816_92141-97739' '(at2g40260 : 104.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PGSC0003DMG400029440, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2336_296346-299246' '(at4g37260 : 171.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 104.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 342.0) & (original description: Putative myb11, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2459_328743-332371' '(at3g30210 : 197.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).; myb domain protein 121 (MYB121); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 9169 Blast hits to 8390 proteins in 555 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 521; Plants - 5868; Viruses - 6; Other Eukaryotes - 1832 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 152.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 394.0) & (original description: Putative MYB14, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2550_197920-201777' '(at5g14340 : 200.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 187.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 400.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2859_80292-89134' '(at1g09710 : 213.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 426.0) & (original description: Putative MTR_8g024690, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold3631_211093-214115' '(at4g21440 : 289.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 208.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 199.0) no description available & (reliability: 578.0) & (original description: Putative myb1, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4153_14887-18572' '(at4g18770 : 200.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 142.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.6) no description available & (reliability: 400.0) & (original description: Putative amyb, Description = Transcriptional activator Myb, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4585_42349-47049' '(at1g63910 : 246.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (p20027|myb3_horvu : 176.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 173.0) no description available & (reliability: 492.0) & (original description: Putative THM1, Description = Transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4935_38566-42402' '(at1g26580 : 166.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative UGD1, Description = AT-rich interactive domain-containing 2-like protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold5867_45376-54045' '(at5g02320 : 369.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 158.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.8) no description available & (reliability: 738.0) & (original description: Putative MYB65, Description = MYB transcription factor MYB65, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6376_181868-185549' '(p27898|mybp_maize : 133.0) Myb-related protein P - Zea mays (Maize) & (at2g47460 : 130.0) "MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. " The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots.; myb domain protein 12 (MYB12); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 11 (TAIR:AT3G62610.1); Has 8833 Blast hits to 8133 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 423; Plants - 5965; Viruses - 6; Other Eukaryotes - 1653 (source: NCBI BLink). & (gnl|cdd|35271 : 129.0) no description available & (reliability: 260.0) & (original description: Putative myb, Description = MYB family protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6538_75642-79834' '(at2g13600 : 387.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 722.0) & (original description: Putative , Description = Pentatricopeptide repeat-containing protein, putative, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6948_72412-76503' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MYB36, Description = MYB-related protein, PFAM = PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold7151_9397-53855' '(at4g18770 : 228.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.2) no description available & (reliability: 456.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold7974_1-3050' '(at2g36890 : 226.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 176.0) no description available & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 452.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00003846ctg001_1291-6289' '(at1g17950 : 227.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 103.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.4) no description available & (reliability: 454.0) & (original description: Putative MYB3, Description = MYB transcription factor 3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00004095ctg001_95-4813' '(p93417|gam1_orysa : 246.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 215.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (reliability: 430.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005034ctg026_2730-10675' '(at1g09710 : 214.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 428.0) & (original description: Putative RCOM_1039610, Description = DNA binding protein, putative, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005264ctg003_145-4344' '(at5g16600 : 271.0) Encodes a putative transcription factor (MYB43).; myb domain protein 43 (MYB43); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q50ex6|odo1_pethy : 250.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 190.0) no description available & (reliability: 542.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005571ctg000_1706-5703' '(at3g28470 : 228.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (p20025|myb38_maize : 194.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 456.0) & (original description: Putative MYB35, Description = Transcription factor MYB35, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00006930ctg001_1502-4959' '(at3g24310 : 199.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (gnl|cdd|35271 : 173.0) no description available & (q4jl76|myba2_orysa : 158.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00008494ctg001_2704-7466' '(at1g25360 : 1004.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative PCMP-H74, Description = Pentatricopeptide repeat-containing protein At1g25360, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00008629ctg010_7473-10572' '(at4g18770 : 228.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 456.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00013740ctg008_11466-14030' '(at5g53200 : 98.2) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative TCL2, Description = MYB-like transcription factor TCL2, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00013875ctg011_2705-8304' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00014152ctg014_1-2964' '(at5g57620 : 228.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 173.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 456.0) & (original description: Putative BLIND, Description = BLIND, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00015624ctg006_1586-4630' '(at4g21440 : 272.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 207.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 201.0) no description available & (reliability: 544.0) & (original description: Putative myb1, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00017353ctg027_5173-8133' '(at4g37260 : 172.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 149.0) no description available & (p93417|gam1_orysa : 108.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 83.5) no description available & (reliability: 344.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00020975ctg001_1-3751' '(at3g13540 : 204.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 408.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00022028ctg000_1-4593' '(at3g61250 : 341.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 205.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 682.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00022522ctg009_51-2951' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 155.0) no description available & (p93417|gam1_orysa : 107.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = R2r3-myb transcription factor, putative, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00023412ctg006_24839-29074' '(at3g08500 : 218.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 188.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 436.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00026094ctg008_2382-6799' '(at5g29000 : 161.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC08g13160D, Description = BnaC08g13160D protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00027320ctg001_10581-13319' '(at5g49620 : 236.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 137.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative MYB108, Description = Transcription factor MYB108, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00035824ctg002_290-3832' '(at1g68320 : 220.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (p27898|mybp_maize : 155.0) Myb-related protein P - Zea mays (Maize) & (reliability: 440.0) & (original description: Putative MYB16, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038665ctg001_12327-16690' '(at5g49330 : 216.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 212.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 172.0) no description available & (reliability: 432.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038812ctg010_10433-22051' '(at4g32730 : 629.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 163.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.0) no description available & (reliability: 1258.0) & (original description: Putative cmyb, Description = Transcriptional activator Myb, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038953ctg004_10666-13379' '(at5g67300 : 223.0) Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.; myb domain protein r1 (MYBR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 77 (TAIR:AT3G50060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 446.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00045529ctg003_882-4169' '(at5g65790 : 228.0) Encodes a putative MYB transcription factor.; myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 170.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00046172ctg000_1-3270' '(at4g21440 : 290.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 580.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00052854ctg001_1-3888' '(at1g07540 : 152.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative TBP1, Description = Putative telomere repeat-binding protein 5-like, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00055631ctg000_1-3294' '(at5g62470 : 272.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 185.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 176.0) no description available & (reliability: 544.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00058143ctg003_1-3319' '(at3g28470 : 146.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (gnl|cdd|35271 : 135.0) no description available & (p20025|myb38_maize : 123.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 292.0) & (original description: Putative mixta, Description = MYB-related transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00060696ctg000_4725-8816' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101ctg07138_1-757' '(at1g09710 : 105.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 210.0) & (original description: Putative At1g09710, Description = DNA binding protein, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00024_284611-288641' '(at3g28470 : 145.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (gnl|cdd|35271 : 133.0) no description available & (p20025|myb38_maize : 123.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 290.0) & (original description: Putative mixta, Description = MYB-related transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00046_921011-924460' '(at5g14340 : 239.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (q50ex6|odo1_pethy : 215.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 478.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00052_650802-655420' '(at1g34670 : 275.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 202.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 550.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00054_45198-48609' '(at1g08810 : 275.0) putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.; myb domain protein 60 (MYB60); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 186.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 550.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00066_269483-275053' '(at1g07540 : 244.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative myb, Description = Telomere repeat-binding protein 5, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00223_290889-294193' '(q4jl76|myba2_orysa : 213.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (at3g46130 : 212.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (gnl|cdd|35271 : 157.0) no description available & (reliability: 424.0) & (original description: Putative MYB48, Description = Transcription factor MYB48, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00292_192499-195494' '(at2g23290 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (p93417|gam1_orysa : 114.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 90.8) no description available & (reliability: 430.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00315_45168-49490' '(at3g60460 : 223.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 147.0) no description available & (p93417|gam1_orysa : 129.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 446.0) & (original description: Putative B25, Description = Putative uncharacterized protein B25, PFAM = PF13921;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00339_326073-330528' '(at3g28470 : 232.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (p20025|myb38_maize : 192.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 464.0) & (original description: Putative MYB35, Description = Transcription factor MYB35, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00388_895303-898669' '(at3g49690 : 218.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 163.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00389_59287-64972' '(at3g12560 : 346.0) Encodes a telomeric DNA-binding protein.; TRF-like 9 (TRFL9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: telomeric DNA binding protein 1 (TAIR:AT5G13820.1); Has 334 Blast hits to 327 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 306; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00448_140605-144049' '(at2g31180 : 168.0) Member of the R2R3 factor gene family.; myb domain protein 14 (MYB14); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 8955 Blast hits to 8193 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 463; Plants - 5874; Viruses - 6; Other Eukaryotes - 1793 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 336.0) & (original description: Putative MYB66, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00501_70200-74245' '(at3g23250 : 255.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 236.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 510.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00551_393158-396901' '(at2g36890 : 209.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 168.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00629_330586-344978' '(at3g08500 : 221.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 175.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 167.0) no description available & (reliability: 442.0) & (original description: Putative MYB46, Description = Transcription factor MYB46, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00783_426301-430004' '(at5g10280 : 268.0) Encodes a putative transcription factor (MYB92).; myb domain protein 92 (MYB92); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 53 (TAIR:AT5G65230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20025|myb38_maize : 196.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 196.0) no description available & (reliability: 536.0) & (original description: Putative MYB92, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00797_108675-112037' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 394.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00859_401438-405898' '(at2g32460 : 211.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 204.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 422.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00862_90238-94706' '(p93417|gam1_orysa : 256.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at2g26960 : 230.0) Member of the R2R3 factor gene family.; myb domain protein 81 (MYB81); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 104 (TAIR:AT2G26950.1); Has 8679 Blast hits to 8043 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 712; Fungi - 479; Plants - 5750; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35271 : 173.0) no description available & (reliability: 460.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00887_274362-279445' '(at1g18330 : 129.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00956_391082-394911' '(at5g57620 : 225.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative MYB83, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00961_403478-418701' '(at5g11510 : 305.0) Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection.; myb domain protein 3r-4 (MYB3R-4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein (TAIR:AT4G32730.1); Has 13831 Blast hits to 8419 proteins in 581 species: Archae - 0; Bacteria - 44; Metazoa - 1293; Fungi - 976; Plants - 8377; Viruses - 6; Other Eukaryotes - 3135 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (q7xbh4|myb4_orysa : 103.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|34748 : 87.8) no description available & (reliability: 610.0) & (original description: Putative cmyb, Description = Transcriptional activator Myb, PFAM = PF13921;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01013_184747-188840' '(at3g23250 : 229.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 224.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 458.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01026_462764-466359' '(at3g12720 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 208.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 486.0) & (original description: Putative MYB64, Description = MYB transcription factor MYB64, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01076_449638-452583' '(at5g53200 : 97.4) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative CPC, Description = Transcription factor CPC, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01102_133095-136834' '(at2g21090 : 326.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 41491 Blast hits to 14018 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 98; Fungi - 122; Plants - 40599; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 616.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01110_14398-18207' '(at1g75250 : 90.1) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative fsm1, Description = Homeodomain-like protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01184_1139331-1143703' '(at1g17950 : 239.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 154.0) no description available & (p20024|myb1_maize : 111.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 85.4) no description available & (reliability: 478.0) & (original description: Putative myb, Description = MYB transcription factor R2R3 type, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01200_780155-783055' '(at4g37260 : 171.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 103.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 342.0) & (original description: Putative myb11, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01302_73316-77500' '(at5g16600 : 268.0) Encodes a putative transcription factor (MYB43).; myb domain protein 43 (MYB43); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q50ex6|odo1_pethy : 247.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 536.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01346_80466-84296' '(at1g26580 : 191.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative MTR_3g023780, Description = ATP-binding protein, putative, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01383_699625-707363' '(p93417|gam1_orysa : 259.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 223.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 174.0) no description available & (reliability: 446.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01394_360621-364664' '(at3g13540 : 252.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 504.0) & (original description: Putative MYB5, Description = Transcription repressor MYB5, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01406_290197-296239' '(at3g09230 : 275.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 1 (MYB1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8868 Blast hits to 7976 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 777; Fungi - 540; Plants - 5565; Viruses - 3; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (q4jl76|myba2_orysa : 114.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.6) no description available & (reliability: 550.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01409_198819-202536' '(at5g57620 : 249.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative MYB36, Description = Transcription factor MYB36, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01555_484302-487297' '(at4g37260 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p20024|myb1_maize : 110.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 90.4) no description available & (reliability: 430.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01658_115702-127852' '(at4g32730 : 305.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (q7xbh4|myb4_orysa : 100.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 610.0) & (original description: Putative myb15, Description = Transcription factor, PFAM = PF13921;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01746_288061-291709' '(at1g34670 : 253.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q50ex6|odo1_pethy : 194.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 506.0) & (original description: Putative MYB1, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01852_384648-388096' '(at1g68930 : 258.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2; Bacteria - 18; Metazoa - 110; Fungi - 135; Plants - 46381; Viruses - 0; Other Eukaryotes - 685 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative glysoja_014600, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF12854)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01859_36554-40307' '(at1g75250 : 104.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01908_133251-136889' '(at3g47600 : 291.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 582.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01927_884896-888593' '(at2g36890 : 220.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 167.0) no description available & (reliability: 440.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01938_570558-580268' '(at1g69560 : 206.0) Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780).; myb domain protein 105 (MYB105); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 117 (TAIR:AT1G26780.2); Has 8910 Blast hits to 7943 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 941; Fungi - 606; Plants - 5396; Viruses - 6; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|35271 : 132.0) no description available & (p20024|myb1_maize : 97.8) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 412.0) & (original description: Putative MYB70, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02030_582181-586225' '(at3g13540 : 203.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 195.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 406.0) & (original description: Putative myb, Description = MYB19, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02039_440487-447736' '(at5g29000 : 216.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02066_185088-192853' '(at5g13820 : 389.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02122_105417-109460' '(at3g49142 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535;PF01535)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02139_299936-308402' '(at2g36960 : 623.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (gnl|cdd|39669 : 299.0) no description available & (reliability: 1246.0) & (original description: Putative TKI1, Description = TSL-kinase interacting protein 1, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02145_986299-990290' '(at2g02060 : 114.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02145_986425-990747' '(at2g02060 : 96.3) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02207_51820-54843' '(at1g57560 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 50 (MYB50); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 8919 Blast hits to 8236 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 751; Fungi - 484; Plants - 5879; Viruses - 6; Other Eukaryotes - 1799 (source: NCBI BLink). & (p20027|myb3_horvu : 205.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 428.0) & (original description: Putative MYB6, Description = R2R3-MYB transcription factor MYB6, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02268_775288-778729' '(at1g34670 : 281.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 207.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 205.0) no description available & (reliability: 562.0) & (original description: Putative MYB2, Description = Transcription factor MYB44-like protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02293_56907-61438' '(at5g56110 : 325.0) Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2.; myb domain protein 103 (MYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20025|myb38_maize : 191.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 650.0) & (original description: Putative MYB80, Description = Transcription factor MYB80, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02315_65590-73741' '(at2g36960 : 624.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (gnl|cdd|39669 : 286.0) no description available & (reliability: 1248.0) & (original description: Putative TKI1, Description = TSL-kinase interacting protein 1, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02354_1169900-1181187' '(at4g32730 : 627.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 163.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.0) no description available & (reliability: 1254.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02375_1236566-1240037' '(at3g49690 : 233.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (q7xbh4|myb4_orysa : 165.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 466.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02385_13086-16683' '(at5g10280 : 208.0) Encodes a putative transcription factor (MYB92).; myb domain protein 92 (MYB92); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 53 (TAIR:AT5G65230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 191.0) no description available & (q50ex6|odo1_pethy : 190.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (reliability: 416.0) & (original description: Putative myb1, Description = MYB family protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02466_105499-112713' '(at5g02320 : 370.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 112.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 103.0) no description available & (reliability: 740.0) & (original description: Putative myb15, Description = Transcription factor, PFAM = PF00249;PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02483_259911-263874' '(at5g15310 : 295.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 204.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 196.0) no description available & (reliability: 590.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02509_311969-316071' '(at3g08500 : 219.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 188.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 438.0) & (original description: Putative MYB3, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02537_1612584-1616262' '(at1g34670 : 296.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 208.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 592.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02541_958254-961177' '(at3g12720 : 167.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (gnl|cdd|35271 : 154.0) no description available & (p20027|myb3_horvu : 149.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 334.0) & (original description: Putative myb18, Description = Myb-related protein Hv33, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02658_383795-387254' '(at4g38620 : 297.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20025|myb38_maize : 280.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 193.0) no description available & (reliability: 594.0) & (original description: Putative MYB308, Description = Myb-related protein 308, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02724_507448-511215' '(q7xbh4|myb4_orysa : 221.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 219.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 179.0) no description available & (reliability: 438.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02774_172197-176635' '(at1g66230 : 261.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 249.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 189.0) no description available & (reliability: 522.0) & (original description: Putative Myb2, Description = Myb-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02869_1108142-1112163' '(at4g21440 : 258.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 199.0) no description available & (reliability: 516.0) & (original description: Putative MYB85, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02972_568398-572406' '(at3g13540 : 200.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 193.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 400.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03005_13734-17882' '(at3g08500 : 186.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 154.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 144.0) no description available & (reliability: 372.0) & (original description: Putative myb18, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03018_307047-311688' '(at1g69560 : 214.0) Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780).; myb domain protein 105 (MYB105); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 117 (TAIR:AT1G26780.2); Has 8910 Blast hits to 7943 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 941; Fungi - 606; Plants - 5396; Viruses - 6; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p20024|myb1_maize : 103.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 428.0) & (original description: Putative MYB70, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03040_93523-96969' '(at4g28110 : 260.0) Member of the R2R3 factor gene family. Expression is induced in response to dessication, ABA and salt treatment. Overexpression of Myb41 results in abnormal cuticle development and decreased cell expansion.; myb domain protein 41 (MYB41); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: MYB-like 102 (TAIR:AT4G21440.1); Has 9017 Blast hits to 8357 proteins in 551 species: Archae - 0; Bacteria - 0; Metazoa - 832; Fungi - 495; Plants - 5900; Viruses - 4; Other Eukaryotes - 1786 (source: NCBI BLink). & (p20025|myb38_maize : 213.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 520.0) & (original description: Putative MYB41, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03049_617826-621132' '(at5g49620 : 245.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 148.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 490.0) & (original description: Putative myb3, Description = Myb factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03049_617913-713710' '(at5g49620 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 151.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative Myb42, Description = Typical P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03145_131580-135020' '(at1g68320 : 257.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (q4jl76|myba2_orysa : 156.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 514.0) & (original description: Putative MYB1, Description = Myb transcription factor 1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03188_598465-601178' '(at2g23290 : 220.0) Member of the R2R3 factor gene family.; myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 88.9) no description available & (reliability: 440.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03236_303781-308894' '(at3g47600 : 281.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 180.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 562.0) & (original description: Putative MYB8, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03256_234367-237535' '(at2g45260 : 284.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 83.5) no description available & (reliability: 544.0) & (original description: Putative At2g30380, Description = BnaA05g04650D protein, PFAM = PF04859)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03326_304485-308047' '(at3g02940 : 229.0) Encodes a putative transcription factor (MYB107).; myb domain protein 107 (MYB107); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9059 Blast hits to 8356 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 783; Fungi - 490; Plants - 6000; Viruses - 3; Other Eukaryotes - 1783 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 198.0) no description available & (reliability: 458.0) & (original description: Putative MYB101, Description = Transcription factor MYB101, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03444_550241-554665' '(at5g14340 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (q50ex6|odo1_pethy : 217.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 486.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03482_222971-226350' '(at3g47600 : 271.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 186.0) no description available & (gnl|cdd|34748 : 80.0) no description available & (reliability: 542.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03570_519114-522965' '(at3g23250 : 250.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 230.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 500.0) & (original description: Putative myb1, Description = Myb-related transcription factor LBM3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03716_498272-501544' '(at5g62470 : 273.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 184.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 546.0) & (original description: Putative hsr1, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03781_44608-47426' '(at4g37260 : 213.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 153.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 92.0) no description available & (reliability: 426.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03797_60171-67305' '(at1g14350 : 451.0) Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.; FOUR LIPS (FLP); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 88 (TAIR:AT2G02820.2); Has 8538 Blast hits to 7627 proteins in 543 species: Archae - 0; Bacteria - 2; Metazoa - 904; Fungi - 528; Plants - 5146; Viruses - 6; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35271 : 121.0) no description available & (p20027|myb3_horvu : 82.4) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|34748 : 80.0) no description available & (reliability: 902.0) & (original description: Putative myb, Description = MYB18, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03929_340217-343859' '(at4g21440 : 246.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 206.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 492.0) & (original description: Putative MYB19, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03934_15033-22419' '(at4g28610 : 227.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PHR1, Description = Protein PHOSPHATE STARVATION RESPONSE 1, PFAM = PF14379;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03965_367740-371126' '(p10290|mybc_maize : 195.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 193.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (reliability: 386.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04082_815527-819390' '(at1g26780 : 233.0) Encodes LOF1 (LATERAL ORGAN FUSION1), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF2 (At1g69560).; myb domain protein 117 (MYB117); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 8894 Blast hits to 7964 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 920; Fungi - 607; Plants - 5396; Viruses - 5; Other Eukaryotes - 1966 (source: NCBI BLink). & (gnl|cdd|35271 : 142.0) no description available & (p20024|myb1_maize : 100.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative RCP1, Description = R2R3-MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04113_1760126-1763133' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04117_224593-227759' '(at3g23250 : 218.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 212.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 436.0) & (original description: Putative MYB50, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04117_760345-764198' '(at1g22640 : 261.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20025|myb38_maize : 250.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 204.0) no description available & (reliability: 522.0) & (original description: Putative MYB330, Description = Myb-related protein 330, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04122_362564-366010' '(at4g21440 : 310.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 200.0) no description available & (reliability: 620.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04133_20739-24730' '(at3g01140 : 320.0) Encodes a MIXTA-like MYB gene NOECK (NOK). Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching.; myb domain protein 106 (MYB106); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome branching, regulation of transcription, DNA-dependent; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8850 Blast hits to 8247 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 708; Fungi - 505; Plants - 5831; Viruses - 3; Other Eukaryotes - 1803 (source: NCBI BLink). & (p20025|myb38_maize : 204.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 200.0) no description available & (reliability: 640.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04193_562985-566891' '(at3g23250 : 207.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20024|myb1_maize : 189.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 414.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04377_465070-469370' '(at5g58850 : 183.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119).; myb domain protein 119 (MYB119); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 64 (TAIR:AT5G11050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35271 : 136.0) no description available & (q4jl76|myba2_orysa : 99.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.6) no description available & (reliability: 366.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04382_75208-80810' '(at5g13820 : 366.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04406_162528-167099' '(at5g52260 : 179.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (p20024|myb1_maize : 158.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 358.0) & (original description: Putative gpm41, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04596_28848-37576' '(at1g51540 : 529.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (reliability: 1006.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF13418;PF13418)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04629_328632-332207' '(at4g39250 : 102.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RAD2, Description = RADIALIS, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04632_51951-56676' '(at3g04030 : 328.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04675_46448-49627' '(at2g36890 : 178.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p20025|myb38_maize : 157.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 356.0) & (original description: Putative scMYB25, Description = ScMYB25 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04684_432463-436359' '(at4g38620 : 258.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 250.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 207.0) no description available & (reliability: 516.0) & (original description: Putative MYB2, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04700_348469-352196' '(at5g57620 : 217.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04784_13912-16172' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative RAD, Description = Transcription factor RADIALIS, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04804_135759-143075' '(at5g52260 : 184.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20027|myb3_horvu : 160.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 368.0) & (original description: Putative scMYB6, Description = ScMYB6 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04819_24266-109255' '(at5g49330 : 203.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 195.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 406.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05056_3204-9715' '(at4g32730 : 250.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 151.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.2) no description available & (reliability: 500.0) & (original description: Putative MYB5, Description = MYB DNA binding protein/ transcription factor-like protein, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05060_269053-272543' '(at3g47600 : 263.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (q7xbh4|myb4_orysa : 175.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative hsr1, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05082_32413-35731' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05324_18992-22498' '(at5g14340 : 223.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 206.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 446.0) & (original description: Putative MYB48, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05363_204792-207964' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 153.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.2) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05368_94541-99081' '(at5g02320 : 295.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 161.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 99.3) no description available & (reliability: 590.0) & (original description: Putative myb, Description = MYB transcription factor R3 type, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05516_61187-77696' '(at4g28610 : 220.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05530_106817-110307' '(at2g36890 : 227.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05541_47138-50309' '(at3g12720 : 234.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 205.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 180.0) no description available & (reliability: 468.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05710_192233-195657' '(at4g38620 : 311.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 300.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 195.0) no description available & (reliability: 622.0) & (original description: Putative MYB1, Description = Myb-related protein Hv1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05734_46170-49778' '(at3g13890 : 144.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20027|myb3_horvu : 136.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 136.0) no description available & (reliability: 288.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05811_693438-699449' '(at1g07540 : 374.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative TRP5, Description = Telomere repeat-binding protein 5, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05836_542619-548812' '(at3g55730 : 278.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 162.0) no description available & (q4jl76|myba2_orysa : 110.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 101.0) no description available & (reliability: 556.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05867_273385-277166' '(at4g21440 : 294.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 212.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 588.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05911_166022-171507' '(at2g42660 : 89.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400028830, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05998_168194-172107' '(at1g34670 : 201.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (p20026|myb1_horvu : 186.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 402.0) & (original description: Putative myb27, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06009_13117-16917' '(at1g26580 : 173.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative UGD1, Description = AT-rich interactive domain-containing 2-like protein, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06155_38910-45775' '(at4g28610 : 228.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative csp1, Description = CDPK substrate protein 1, PFAM = PF14379;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06349_341769-347352' '(at3g27810 : 230.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 151.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 460.0) & (original description: Putative myb8, Description = MYB8 protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06412_401018-417647' '(at2g47210 : 514.0) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|37867 : 319.0) no description available & (reliability: 1028.0) & (original description: Putative SWC4, Description = SWR1-complex protein 4, PFAM = PF16282;PF05499)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06436_235995-240162' '(at3g61250 : 325.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 203.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 650.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06482_570311-573393' '(at2g37630 : 365.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 101.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 730.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06560_1-2190' '(at3g30210 : 148.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).; myb domain protein 121 (MYB121); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 9169 Blast hits to 8390 proteins in 555 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 521; Plants - 5868; Viruses - 6; Other Eukaryotes - 1832 (source: NCBI BLink). & (gnl|cdd|35271 : 129.0) no description available & (q4jl76|myba2_orysa : 125.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative MYB14, Description = MYB-related transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06616_405030-409652' '(at5g49620 : 244.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 178.0) no description available & (q4jl76|myba2_orysa : 140.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06688_178049-186787' '(at5g29000 : 219.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06736_840045-843210' '(at3g12720 : 237.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 474.0) & (original description: Putative MYB83, Description = MYB transcription factor 83, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06795_405006-409402' '(at5g15310 : 247.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 195.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 189.0) no description available & (gnl|cdd|34748 : 80.4) no description available & (reliability: 494.0) & (original description: Putative myb9, Description = Mixta, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06851_73145-77073' '(at1g16490 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 58 (MYB58); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1); Has 8863 Blast hits to 8152 proteins in 473 species: Archae - 0; Bacteria - 3; Metazoa - 752; Fungi - 456; Plants - 5848; Viruses - 6; Other Eukaryotes - 1798 (source: NCBI BLink). & (p20024|myb1_maize : 207.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 430.0) & (original description: Putative Myb4, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07066_13654-16875' '(at4g38620 : 292.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 286.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 584.0) & (original description: Putative MYB308, Description = Myb-related protein 308, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07231_815637-819250' '(at3g47600 : 288.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 194.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 576.0) & (original description: Putative MYBJ3, Description = Transcription factor MYBJ3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07402_566431-571311' '(at1g66230 : 252.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 239.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 504.0) & (original description: Putative Myb2, Description = Myb-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07424_216964-220123' '(at2g36960 : 124.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (reliability: 248.0) & (original description: Putative TKI1, Description = TSL-kinase interacting 1-like protein, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07474_453022-456665' '(at1g17950 : 204.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 107.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 81.2) no description available & (reliability: 408.0) & (original description: Putative MYB105, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07645_417444-421669' '(at3g04030 : 333.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative scMYB55, Description = ScMYB55 protein, PFAM = PF00249;PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07656_71492-75290' '(at4g18770 : 229.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 458.0) & (original description: Putative MYB17, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07744_127721-131578' '(at5g14340 : 228.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 210.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 173.0) no description available & (reliability: 456.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07751_148626-157332' '(at1g09710 : 163.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 326.0) & (original description: Putative At1g09710, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07937_413569-420542' '(p93417|gam1_orysa : 284.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 243.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (reliability: 486.0) & (original description: Putative myb16, Description = MYB16, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07984_190040-194778' '(at1g01150 : 84.7) Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At1g01150, Description = BnaA06g30300D protein, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08009_17254-20491' '(at4g21440 : 260.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 210.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 520.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08137_184544-198386' '(at1g18330 : 124.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08137_294939-299937' '(at1g17950 : 226.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 143.0) no description available & (p20024|myb1_maize : 105.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.0) no description available & (reliability: 452.0) & (original description: Putative MYB3, Description = MYB transcription factor 3, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08782_57125-61742' '(at5g49330 : 198.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 192.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 162.0) no description available & (reliability: 396.0) & (original description: Putative lbm1, Description = MYB family protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09078_158975-166494' '(at2g47210 : 515.0) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|37867 : 320.0) no description available & (reliability: 1030.0) & (original description: Putative SWC4, Description = SWR1-complex protein 4, PFAM = PF16282;PF05499)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09116_127484-131811' '(at4g28610 : 95.1) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09760_25126-77859' '(q7xbh4|myb4_orysa : 151.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09773_185987-191367' '(at5g13820 : 384.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09832_50338-62092' '(at4g32730 : 647.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 162.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.4) no description available & (reliability: 1294.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf10124_353878-357030' '(at5g52600 : 187.0) Member of the R2R3 factor gene family.; myb domain protein 82 (MYB82); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 66 (TAIR:AT5G14750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35271 : 156.0) no description available & (p10290|mybc_maize : 154.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 374.0) & (original description: Putative TSF, Description = Tuber-specific and sucrose-responsive element binding factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf10448_11479-14444' '(at5g45420 : 194.0) Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At5g45420, Description = AT5g45420/MFC19_9, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11235_369233-372537' '(at2g45260 : 284.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 86.2) no description available & (reliability: 528.0) & (original description: Putative BnaAnng27430D, Description = BnaAnng27430D protein, PFAM = PF04859)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11569_24529-31293' '(p93417|gam1_orysa : 276.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 235.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (reliability: 470.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11790_186636-189686' '(at3g46130 : 199.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (q53nk6|myba1_orysa : 199.0) Myb-related protein MYBAS1 - Oryza sativa (Rice) & (gnl|cdd|35271 : 164.0) no description available & (reliability: 398.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12045_175011-182680' '(at3g55730 : 269.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 158.0) no description available & (q4jl76|myba2_orysa : 104.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 95.8) no description available & (reliability: 538.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12143_154844-158201' '(at3g47600 : 300.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 185.0) no description available & (gnl|cdd|34748 : 81.2) no description available & (reliability: 600.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12214_33355-36788' '(q4jl76|myba2_orysa : 199.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (at3g46130 : 197.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (gnl|cdd|35271 : 161.0) no description available & (reliability: 394.0) & (original description: Putative MYB59, Description = Transcription factor MYB59, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12280_108746-123359' '(at5g06800 : 110.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 200.0) & (original description: Putative PHL1, Description = BnaA03g55680D protein, PFAM = PF14379)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12321_49494-56226' '(at2g02060 : 92.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12852_228685-232245' '(at1g09540 : 262.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 214.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 524.0) & (original description: Putative MYB4, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13162_122488-125639' '(at1g68320 : 224.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 157.0) no description available & (q4jl76|myba2_orysa : 150.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 448.0) & (original description: Putative MYB16, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13186_335435-341297' '(at3g27810 : 227.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (q4jl76|myba2_orysa : 151.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative MYB340, Description = Myb-related protein 340, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13710_447949-451181' '(at2g37630 : 234.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 95.5) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative ARP1, Description = PHANTASTICA-like protein, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf14562_97109-105463' '(at5g02320 : 367.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 159.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.8) no description available & (reliability: 734.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15244_69384-79911' '(at3g52250 : 477.0) Encodes a protein with a putative role in mRNA splicing.; Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: RNA splicing; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37089 : 112.0) no description available & (reliability: 954.0) & (original description: Putative glysoja_048974, Description = Nuclear receptor corepressor 2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15536_88498-92214' '(at3g13540 : 200.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 196.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 400.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15568_125286-138256' '(at3g61250 : 344.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 206.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 188.0) no description available & (reliability: 688.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15721_103296-107303' '(q50ex6|odo1_pethy : 421.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (at4g12350 : 259.0) Encodes a putative transcription factor (MYB42).; myb domain protein 42 (MYB42); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 85 (TAIR:AT4G22680.1); Has 8783 Blast hits to 8115 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 398; Plants - 5939; Viruses - 6; Other Eukaryotes - 1662 (source: NCBI BLink). & (gnl|cdd|35271 : 196.0) no description available & (reliability: 518.0) & (original description: Putative ODO1, Description = Protein ODORANT1, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15817_300012-303380' '(at3g49690 : 223.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (p20025|myb38_maize : 163.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 446.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf16258_57816-63801' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf16378_132967-138587' '(at3g27810 : 234.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 150.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative MYB305, Description = Myb-related protein 305, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf17127_27610-31533' '(at5g52260 : 189.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20027|myb3_horvu : 159.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 378.0) & (original description: Putative MYB58, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf18896_94442-97685' '(at5g49620 : 236.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 136.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative MYB108, Description = Transcription factor MYB108, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf18955_72163-76409' '(at3g04030 : 315.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf19180_12534-16251' '(at5g57620 : 228.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 169.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf24096_25540-30061' '(at1g25360 : 998.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1996.0) & (original description: Putative PCMP-H74, Description = Pentatricopeptide repeat-containing protein At1g25360, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf25043_11097-14179' '(at2g37630 : 343.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf29357_58728-61858' '(at3g24310 : 249.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q4jl76|myba2_orysa : 168.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf31568_21699-28157' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf34895_33028-36169' '(at3g23250 : 174.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T
'27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf35850_17152-21968' '(at1g63910 : 238.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (p20027|myb3_horvu : 172.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 476.0) & (original description: Putative THM1, Description = Transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold6781_2573-5612' '(at5g05790 : 235.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 123.0) no description available & (reliability: 470.0) & (original description: Putative DIV2B, Description = DIV2B protein, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold11745_8078-11629' '(at4g39250 : 101.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative fsm1, Description = SANT/MYB domain protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold19798_29343-32705' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold23724_8219-18227' '(at5g52660 : 230.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 107.0) no description available & (reliability: 460.0) & (original description: Putative RVE6, Description = Protein REVEILLE 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold24283_576-5417' '(at5g17300 : 158.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative MYB177, Description = MYB transcription factor MYB177, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold26514_12052-15588' '(at1g49010 : 112.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative MYB8, Description = BnaA06g03350D protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold34910_16199-21491' '(at5g56840 : 152.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold36964_3425-7452' '(at5g56840 : 161.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold42866_21245-29067' '(at1g49950 : 157.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB34, Description = Single MYB histone protein, PFAM = PF00538;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold47389_5315-16180' '(at1g13450 : 436.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 107.0) no description available & (reliability: 872.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold48038_1970-5425' '(at5g58900 : 282.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 125.0) no description available & (reliability: 564.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold62403_2422-6972' '(at5g61620 : 152.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold74140_1823-6054' '(at5g56840 : 164.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold65_985500-997098' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 874.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold127_827429-831655' '(at1g49950 : 255.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold751_152973-458425' '(at2g38090 : 239.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 103.0) no description available & (reliability: 478.0) & (original description: Putative DIV, Description = DIVARICATA, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold751_454914-458500' '(at2g38090 : 239.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 115.0) no description available & (reliability: 478.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1322_136155-230372' '(at1g49010 : 242.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 121.0) no description available & (reliability: 484.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1471_657675-672190' '(at5g08520 : 275.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 550.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1993_62113-64978' '(at1g75250 : 93.6) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative RL1, Description = Protein RADIALIS-like 1, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold2196_221862-229355' '(at1g49950 : 186.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative MYB33, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold2646_205295-237769' '(at1g09770 : 947.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 504.0) no description available & (gnl|cdd|34748 : 163.0) no description available & (reliability: 1894.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF13921;PF11831)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00000867ctg042_18969-44473' '(at1g09770 : 833.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 408.0) no description available & (gnl|cdd|34748 : 96.6) no description available & (reliability: 1666.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF11831;PF13921)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00000867ctg042_37741-41635' '(at1g09770 : 177.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative myb26, Description = Cell division cycle 5-like protein, PFAM = )' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002795ctg016_17019-20113' '(at5g47390 : 144.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002828ctg002_348-2346' '(at3g11280 : 236.0) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|35943 : 98.1) no description available & (reliability: 472.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002989ctg005_25662-30057' '(at1g49950 : 227.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative TRB2, Description = Telomere repeat-binding factor 2, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00009170ctg000_5134-9264' '(at5g47390 : 157.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB17, Description = Putative MYB-related protein 17, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00012515ctg015_2391-10306' '(at1g49950 : 167.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative MYB34, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00013740ctg008_11466-14030' '(at5g53200 : 98.2) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative TCL2, Description = MYB-like transcription factor TCL2, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00016291ctg003_2061-5699' '(at5g56840 : 134.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00024985ctg005_2489-6490' '(at5g17300 : 157.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB177, Description = MYB transcription factor MYB177, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00025259ctg001_4468-7976' '(at2g38090 : 238.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 476.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00025259ctg001_4474-7982' '(at2g38090 : 238.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 476.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00044962ctg014_11232-15432' '(at1g49950 : 132.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative scMYB54, Description = ScMYB54 protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00048908ctg001_14846-18690' '(at5g04760 : 202.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 104.0) no description available & (reliability: 404.0) & (original description: Putative myb, Description = MYB5, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00053840ctg000_36016-41480' '(at5g08520 : 169.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 338.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00057668ctg001_280-13144' '(at5g08520 : 289.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 129.0) no description available & (reliability: 578.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00059830ctg000_682-4576' '(at5g17300 : 159.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative LHY, Description = Putative uncharacterized protein LHY, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00024_16315-19730' '(at1g74840 : 162.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2). & (reliability: 324.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00108_238119-242318' '(at5g56840 : 161.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00226_124655-127828' '(at1g75250 : 106.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative RL5, Description = Protein RADIALIS-like 5, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00304_250208-265615' '(at5g08520 : 174.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 112.0) no description available & (reliability: 348.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00350_405175-409032' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00539_90906-125734' '(at1g09770 : 946.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 500.0) no description available & (gnl|cdd|34748 : 163.0) no description available & (reliability: 1892.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF11831;PF13921)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00725_380286-383790' '(at1g49010 : 212.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 127.0) no description available & (reliability: 424.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00853_6283-14697' '(at1g49950 : 182.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative MYB33, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00887_274362-279445' '(at1g18330 : 129.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01076_449638-452583' '(at5g53200 : 97.4) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative CPC, Description = Transcription factor CPC, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01110_14398-18207' '(at1g75250 : 90.1) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative fsm1, Description = Homeodomain-like protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01478_704386-724384' '(at5g08520 : 285.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 129.0) no description available & (reliability: 570.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01500_612676-617057' '(at5g47390 : 341.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative myb4, Description = Myb transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01512_166685-171977' '(at5g56840 : 150.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01738_735443-738914' '(at2g38090 : 306.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 131.0) no description available & (reliability: 612.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01834_523937-527774' '(at5g04760 : 196.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 92.3) no description available & (reliability: 392.0) & (original description: Putative MYB, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01859_36554-40307' '(at1g75250 : 104.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02026_80767-104361' '(at1g01060 : 157.0) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1; LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1). & (reliability: 314.0) & (original description: Putative lhy, Description = LHY protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02250_22338-25793' '(at5g58900 : 274.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 116.0) no description available & (reliability: 548.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02433_700742-705719' '(at5g17300 : 160.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative RVE1, Description = Protein REVEILLE 1, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02786_27147-30701' '(at1g49010 : 217.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 434.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02812_118759-122325' '(at1g49010 : 123.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative BnaAnng01040D, Description = BnaAnng01040D protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02831_270526-279565' '(at1g17520 : 181.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative myb5, Description = Histone H1, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02940_85189-89116' '(at1g19000 : 168.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G74840.1); Has 1188 Blast hits to 1183 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03435_161432-178312' '(at1g09770 : 946.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 502.0) no description available & (gnl|cdd|34748 : 165.0) no description available & (reliability: 1892.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF13921;PF11831)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03500_247612-250708' '(at5g05790 : 236.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 118.0) no description available & (reliability: 472.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03660_121761-123997' '(at1g75250 : 97.8) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative RAD, Description = RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03690_99150-102102' '(at1g75250 : 93.2) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03779_657106-659935' '(at3g11280 : 236.0) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|35943 : 105.0) no description available & (reliability: 472.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03860_365329-368752' '(at2g38090 : 293.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 132.0) no description available & (reliability: 586.0) & (original description: Putative DIV3B, Description = DIV3B protein, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03993_638038-641647' '(at5g04760 : 206.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 104.0) no description available & (reliability: 412.0) & (original description: Putative myb, Description = MYB5, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04113_1760126-1763133' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04629_328632-332207' '(at4g39250 : 102.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RAD2, Description = RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04655_466040-469326' '(at1g75250 : 98.6) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04657_227631-235050' '(at1g49950 : 227.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04784_13912-16172' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative RAD, Description = Transcription factor RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04889_156609-160247' '(at5g56840 : 131.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04905_708710-721258' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 108.0) no description available & (reliability: 874.0) & (original description: Putative GT-4, Description = Trihelix transcription factor GT-4, PFAM = PF13837)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05082_32413-35731' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05089_41681-50903' '(at3g16350 : 215.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 2847 Blast hits to 2586 proteins in 268 species: Archae - 0; Bacteria - 117; Metazoa - 791; Fungi - 88; Plants - 1494; Viruses - 13; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05279_343388-345654' '(at1g75250 : 111.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative RL3, Description = Protein RADIALIS-like 3, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05449_302004-316373' '(at5g56840 : 154.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative MYB1, Description = Putative MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05588_1140727-1149845' '(at5g08520 : 168.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 113.0) no description available & (reliability: 336.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05736_47269-51666' '(at5g47390 : 342.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative myb4, Description = Myb transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05767_312048-350967' '(at5g05790 : 164.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 110.0) no description available & (reliability: 328.0) & (original description: Putative myb3, Description = MYB transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05858_105568-108431' '(at5g61620 : 94.4) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative myb, Description = Putative MYB DNA-binding domain superfamily protein, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf06189_262488-265935' '(at5g58900 : 279.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 558.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07223_104146-110688' '(at3g09600 : 241.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35943 : 84.6) no description available & (reliability: 482.0) & (original description: Putative myb, Description = MYB3, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07437_120794-123870' '(at1g70000 : 159.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1). & (reliability: 318.0) & (original description: Putative myb, Description = MYB12, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07611_104509-107873' '(at1g49010 : 217.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 126.0) no description available & (reliability: 434.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf08137_184544-198386' '(at1g18330 : 124.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf08293_182031-186581' '(at5g61620 : 149.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative MYB128, Description = MYB transcription factor MYB128, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09170_151921-162244' '(at1g17520 : 183.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249;PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09367_107898-123329' '(at5g52660 : 255.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 99.2) no description available & (reliability: 510.0) & (original description: Putative RVE6, Description = Protein REVEILLE 6, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09427_198531-200440' '(at5g08520 : 88.6) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative myb3, Description = MYBR domain class transcription factor, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09505_34050-38297' '(at1g49950 : 252.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00538;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09512_532782-543017' '(at5g52660 : 237.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 103.0) no description available & (reliability: 474.0) & (original description: Putative RVE3, Description = Protein REVEILLE 3, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09512_533191-542527' '(at5g52660 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative myb, Description = Myb-like protein G, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09590_373740-377548' '(at5g17300 : 158.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative LHY, Description = Putative uncharacterized protein LHY, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf10228_65497-71801' '(at3g09600 : 119.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative myb, Description = MYB10, PFAM = )' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf11325_86172-96362' '(at1g49950 : 116.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative myb13, Description = Histone H1, PFAM = PF00538)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf13995_211074-216634' '(at1g49950 : 243.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative SMH5, Description = Single myb histone 5, PFAM = PF00538;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf16660_286335-289636' '(at1g49010 : 245.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 123.0) no description available & (reliability: 490.0) & (original description: Putative MYB28, Description = Putative MYB-related protein 28, PFAM = PF00249;PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf21409_115861-119402' '(at1g74840 : 167.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2). & (reliability: 334.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T
'27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf26781_1-6641' '(at1g17520 : 191.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative myb68, Description = MYB-related protein, PFAM = PF00538;PF13921)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold3488_64738-74259' '(at5g22380 : 223.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q53nf7|nac71_orysa : 113.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 404.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold7265_33627-41134' '(at1g56010 : 302.0) Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1); NAC domain containing protein 1 (NAC1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12977.1); Has 2928 Blast hits to 2921 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2928; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 192.0) no description available & (q5cd17|nac77_orysa : 181.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: Putative NAC021, Description = NAC domain-containing protein 21/22, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold11458_13989-27238' '(at3g56570 : 493.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 986.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold11458_14148-24289' '(at3g56570 : 488.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 101.0) no description available & (reliability: 976.0) & (original description: Putative ZOSMA_3G00600, Description = SET domain-containing protein, PFAM = PF00856)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold39800_10395-16150' '(at3g49530 : 264.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 200.0) no description available & (q5z6b6|nac76_orysa : 155.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold58436_1862-8109' '(at1g65910 : 426.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 228.0) no description available & (q7gcl7|nac74_orysa : 224.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 78, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold66920_1-3258' '(at4g28530 : 101.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative CUC3, Description = Transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold8_969393-982686' '(at3g56570 : 444.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 96.3) no description available & (reliability: 888.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold162_627081-634156' '(at1g65910 : 427.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 224.0) no description available & (q7gcl7|nac74_orysa : 220.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative NAC78, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold2008_374831-377622' '(q7f2l3|nac48_orysa : 135.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g77450 : 134.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 108.0) no description available & (reliability: 256.0) & (original description: Putative ATAF, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold2720_243198-255776' '(at1g65910 : 317.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 218.0) no description available & (q7gcl7|nac74_orysa : 213.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 634.0) & (original description: Putative AIF, Description = NAC domain-containing protein 78, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold4881_42925-46513' '(at4g27410 : 357.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 233.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 658.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold5440_109687-117402' '(q7f2l3|nac48_orysa : 182.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g61110 : 181.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (reliability: 332.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold5443_80606-86912' '(at1g65910 : 411.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 226.0) no description available & (q7gcl7|nac74_orysa : 214.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 822.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold6458_45575-55408' '(at4g28530 : 276.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 185.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 552.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00006606ctg006_104-4178' '(at3g15510 : 318.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 241.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 636.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00011424ctg011_1-3845' '(gnl|cdd|66085 : 112.0) no description available & (at1g61110 : 104.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7ezt1|nac67_orysa : 103.0) NAC domain-containing protein 67 (ONAC067) - Oryza sativa (Rice) & (reliability: 206.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 18, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00014647ctg011_714-5416' '(at2g43000 : 231.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 436.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00029613ctg027_11021-14690' '(at1g61110 : 279.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 250.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 520.0) & (original description: Putative NAC5, Description = NAC family transcription factor 5, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101ctg15807_1-2966' '(at4g27410 : 355.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 231.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 660.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101ctg15860_1-3379' '(at2g43000 : 260.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 176.0) no description available & (q52qh4|nac68_orysa : 171.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative NAC10, Description = NAC protein 10, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00046_241828-249174' '(at3g01600 : 279.0) NAC domain containing protein 44 (NAC044); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 1967 Blast hits to 1962 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 103.0) no description available & (reliability: 558.0) & (original description: Putative NAC6, Description = NAC domain protein, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00109_279350-282537' '(at2g33480 : 111.0) NAC domain containing protein 41 (NAC041); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 83 (TAIR:AT5G13180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q52qh4|nac68_orysa : 100.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 97.3) no description available & (reliability: 222.0) & (original description: Putative NH5, Description = Nam-like protein 5, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00308_147922-154756' '(at3g49530 : 273.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 209.0) no description available & (q5z6b6|nac76_orysa : 167.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 524.0) & (original description: Putative NAC062, Description = NAC domain-containing protein 62, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00944_440354-446612' '(at4g28530 : 258.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 185.0) no description available & (q5cd17|nac77_orysa : 170.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01320_106758-113850' '(at1g65910 : 419.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 227.0) no description available & (q7gcl7|nac74_orysa : 213.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 838.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01450_596007-601893' '(at1g77450 : 197.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 195.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 374.0) & (original description: Putative AF1, Description = NAC domain protein, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01526_407570-411080' '(at4g17980 : 237.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q7gcl7|nac74_orysa : 164.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02210_176340-179262' '(at5g13180 : 252.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q53nf7|nac71_orysa : 166.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative NAC083, Description = NAC domain-containing protein 83, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02340_617695-621364' '(at1g61110 : 253.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 228.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 472.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02413_234713-239708' '(q53nf7|nac71_orysa : 180.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (at1g61110 : 178.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 169.0) no description available & (reliability: 328.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02433_68125-74804' '(at1g65910 : 415.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 226.0) no description available & (q7gcl7|nac74_orysa : 214.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02983_133589-140079' '(at3g49530 : 268.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 208.0) no description available & (q5z6b6|nac76_orysa : 166.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 528.0) & (original description: Putative Nh1, Description = Nam-like protein 1, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03160_103494-107976' '(at5g22380 : 247.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q52qh4|nac68_orysa : 127.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 464.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03204_193712-196939' '(at4g27410 : 367.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 245.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 692.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03366_59441-66590' '(at4g28530 : 199.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 130.0) no description available & (q5cd17|nac77_orysa : 129.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative cuc3, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03695_197287-200847' '(at3g10490 : 84.0) NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). & (q52qh4|nac68_orysa : 82.8) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 164.8) & (original description: Putative PGSC0003DMG400007065, Description = , PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03987_57287-62418' '(gnl|cdd|66085 : 94.2) no description available & (at1g69490 : 92.8) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = , PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04099_829815-836572' '(at3g49530 : 263.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 202.0) no description available & (q5z6b6|nac76_orysa : 157.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04323_106889-111591' '(at2g43000 : 230.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 169.0) no description available & (reliability: 434.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04496_95351-99070' '(at3g15510 : 313.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 242.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 626.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05649_257203-268471' '(at3g56570 : 487.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 107.0) no description available & (reliability: 974.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05649_257895-268378' '(at3g56570 : 485.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 970.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05821_221461-224906' '(at5g13180 : 220.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf06588_132295-135580' '(at1g61110 : 227.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 197.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 195.0) no description available & (reliability: 448.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf06757_84240-90487' '(at1g65910 : 416.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 227.0) no description available & (q7gcl7|nac74_orysa : 224.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 832.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf07850_886140-888478' '(at5g22380 : 128.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 87.3) no description available & (reliability: 256.0) & (original description: Putative TERN, Description = NAC domain-containing protein 90, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf08028_65217-70571' '(at3g15510 : 303.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 230.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 606.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf09792_341704-349403' '(at4g28530 : 261.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 191.0) no description available & (q5cd17|nac77_orysa : 168.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 522.0) & (original description: Putative NAC17, Description = NAC domain-containing protein, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf11773_166988-173419' '(at4g28530 : 277.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q5cd17|nac77_orysa : 179.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 554.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf14516_1-72408' '(at4g27410 : 360.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 236.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 204.0) no description available & (reliability: 672.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf20828_55628-58208' '(at5g13180 : 216.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf27945_59694-66598' '(at3g49530 : 258.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 203.0) no description available & (q5z6b6|nac76_orysa : 159.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative NAC06, Description = NAC domain-containing protein, PFAM = PF02365)' T
'27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf39126_3549-8165' '(at4g28530 : 263.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 181.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T
'27.3.28' 'RNA.regulation of transcription.SBP,Squamosa promoter binding protein family' '' ''
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold7106_1-1712' '(at3g27010 : 86.3) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold11532_18220-21931' '(gnl|cdd|67262 : 111.0) no description available & (at3g18550 : 103.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold15273_449-3628' '(gnl|cdd|67262 : 121.0) no description available & (at1g67260 : 109.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative CYC, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold23240_26945-30213' '(gnl|cdd|67262 : 122.0) no description available & (at4g18390 : 120.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative TCP24, Description = TCP transcription factor 24, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold26085_19040-22167' '(gnl|cdd|67262 : 129.0) no description available & (at1g68800 : 114.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold47044_9314-12307' '(at2g31070 : 115.0) TCP family protein involved in heterchronic regulation of leaf differentiation.; TCP domain protein 10 (TCP10); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1897 Blast hits to 1802 proteins in 357 species: Archae - 0; Bacteria - 4; Metazoa - 259; Fungi - 36; Plants - 1423; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 230.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold48023_6534-11459' '(at3g47620 : 123.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 244.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold48752_4245-7225' '(at5g60970 : 142.0) TCP gene involved in heterochronic control of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5" (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 118.0) no description available & (reliability: 284.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold50397_8503-11468' '(at1g35560 : 156.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 110.0) no description available & (reliability: 312.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold57228_401-3666' '(at3g15030 : 223.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 446.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold73662_2907-6160' '(at3g15030 : 256.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 120.0) no description available & (reliability: 512.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold77707_3668-6597' '(at3g15030 : 149.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 115.0) no description available & (reliability: 298.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold83624_318-3412' '(at3g15030 : 123.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 107.0) no description available & (reliability: 246.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold200_59457-62545' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 102.0) no description available & (reliability: 238.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold1355_430332-433216' '(at3g27010 : 166.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 109.0) no description available & (reliability: 332.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold4868_21389-24939' '(at1g58100 : 160.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 320.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold4868_21392-24990' '(at1g58100 : 160.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 320.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold6266_82587-85465' '(at3g27010 : 191.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 382.0) & (original description: Putative TCP20, Description = Transcription factor TCP20, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold8461_31882-35056' '(at3g15030 : 202.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 404.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00000388ctg030_32716-35966' '(gnl|cdd|67262 : 113.0) no description available & (at1g67260 : 93.6) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00005191ctg009_1-2659' '(at1g35560 : 175.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 350.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00010539ctg000_5727-8797' '(at5g51910 : 192.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT2G45680.1); Has 731 Blast hits to 731 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 384.0) & (original description: Putative TCP19, Description = Transcription factor TCP19, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00012283ctg004_1-3792' '(gnl|cdd|67262 : 119.0) no description available & (at1g30210 : 118.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00014998ctg009_5805-9278' '(at3g15030 : 252.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 504.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00019500ctg005_5819-8819' '(at1g58100 : 161.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 322.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00035738ctg005_7989-10631' '(at4g18390 : 128.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 256.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00041320ctg008_2430-18714' '(at3g27010 : 169.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 107.0) no description available & (reliability: 338.0) & (original description: Putative TCP20, Description = Transcription factor TCP20, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00054926ctg003_2350-5683' '(at1g53230 : 208.0) Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3" (TCP3); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1510 Blast hits to 1508 proteins in 333 species: Archae - 0; Bacteria - 12; Metazoa - 43; Fungi - 12; Plants - 1439; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 398.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00332_760373-762750' '(at3g27010 : 137.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 104.0) no description available & (reliability: 274.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00757_523129-526025' '(at3g02150 : 141.0) a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.; plastid transcription factor 1 (PTF1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1); Has 1452 Blast hits to 1452 proteins in 313 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|67262 : 115.0) no description available & (reliability: 282.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00885_685745-689007' '(gnl|cdd|67262 : 126.0) no description available & (at1g30210 : 122.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01143_1045364-1048344' '(at5g60970 : 143.0) TCP gene involved in heterochronic control of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5" (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 118.0) no description available & (reliability: 286.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01338_250005-253132' '(gnl|cdd|67262 : 126.0) no description available & (at1g68800 : 112.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01917_1090687-1096084' '(at5g23280 : 188.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 117.0) no description available & (reliability: 376.0) & (original description: Putative TCP7, Description = Transcription factor TCP7, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02188_210624-215001' '(at3g27010 : 191.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 382.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02272_310854-313825' '(at1g35560 : 168.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 110.0) no description available & (reliability: 336.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02337_45989-49317' '(at3g47620 : 141.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 256.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02657_105357-108687' '(gnl|cdd|67262 : 108.0) no description available & (at1g68800 : 89.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02786_199959-203670' '(gnl|cdd|67262 : 110.0) no description available & (at3g18550 : 103.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf03278_390314-394474' '(at4g18390 : 119.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 238.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf03932_532492-535766' '(gnl|cdd|67262 : 129.0) no description available & (at1g30210 : 122.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCP24, Description = TCP transcription factor 24, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04068_36157-39773' '(at1g58100 : 164.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 328.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04068_36208-39722' '(at1g58100 : 157.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 314.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04366_133911-137135' '(gnl|cdd|67262 : 121.0) no description available & (at1g67260 : 109.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative cyc2c, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05081_224327-226965' '(at2g37000 : 126.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 346 Blast hits to 346 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 346; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 252.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05177_471447-474400' '(at5g23280 : 203.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 111.0) no description available & (reliability: 406.0) & (original description: Putative TCP7, Description = Transcription factor TCP7, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05229_198307-201380' '(at1g69690 : 150.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 120; Fungi - 15; Plants - 698; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 300.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05396_312128-314466' '(at4g18390 : 123.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 246.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05552_834602-837675' '(at5g51910 : 194.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT2G45680.1); Has 731 Blast hits to 731 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 388.0) & (original description: Putative TCP19, Description = Transcription factor TCP19, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05678_324499-327726' '(gnl|cdd|67262 : 117.0) no description available & (at1g67260 : 105.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05797_186332-189570' '(gnl|cdd|67262 : 121.0) no description available & (at1g68800 : 104.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07060_453350-456609' '(at3g15030 : 245.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 120.0) no description available & (reliability: 490.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07611_232296-235546' '(gnl|cdd|67262 : 112.0) no description available & (at1g67260 : 91.7) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07829_542568-547599' '(at3g47620 : 122.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 242.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07883_706532-709461' '(at3g15030 : 140.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 280.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08142_389332-392600' '(at3g15030 : 234.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 117.0) no description available & (reliability: 468.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08621_170310-173494' '(at1g35560 : 173.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 346.0) & (original description: Putative TCP23, Description = Transcription factor TCP23, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08755_135001-150980' '(at3g27010 : 177.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 104.0) no description available & (reliability: 354.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf10122_256571-259137' '(at3g27010 : 171.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 109.0) no description available & (reliability: 342.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf12470_280521-283609' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 238.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf12994_223825-226947' '(gnl|cdd|67262 : 108.0) no description available & (at3g18550 : 94.7) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf13540_9655-13065' '(at3g15030 : 223.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 119.0) no description available & (reliability: 446.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T
'27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf18102_13367-16296' '(at3g15030 : 154.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 308.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold21806_27144-30280' '(at3g14180 : 181.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: 6B-interacting protein 1-like 1 (TAIR:AT1G54060.1); Has 515 Blast hits to 439 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 2; Plants - 432; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39483 : 137.0) no description available & (reliability: 362.0) & (original description: Putative ASIL1, Description = Trihelix transcription factor ASIL1, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold44268_6766-9767' '(at2g44730 : 182.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 98.3) no description available & (reliability: 364.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold47389_5315-16180' '(at1g13450 : 436.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 107.0) no description available & (reliability: 872.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold58612_2404-6963' '(at1g76890 : 306.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 161.0) no description available & (reliability: 612.0) & (original description: Putative GT2, Description = SANT DNA-binding domain-containing protein, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold84027_1-4451' '(at2g35640 : 194.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold65_985500-997098' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 874.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold569_516177-520031' '(at1g76880 : 211.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 128.0) no description available & (reliability: 422.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold2701_164585-170642' '(at3g58630 : 206.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 131.0) no description available & (reliability: 412.0) & (original description: Putative NtSIP1, Description = 6b-interacting protein 1, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold2854_67747-73379' '(at5g03680 : 179.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 158.0) no description available & (reliability: 358.0) & (original description: Putative PTL, Description = Trihelix transcription factor PTL, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold3090_271653-275071' '(at3g10040 : 254.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5239_95392-103372' '(at4g17050 : 448.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83763 : 229.0) no description available & (reliability: 896.0) & (original description: Putative GIP1, Description = Ureidoglycine aminohydrolase, PFAM = )' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5295_22711-26438' '(at2g35640 : 160.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5456_3171-10281' '(at3g58630 : 128.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 119.0) no description available & (reliability: 256.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold8077_29-8426' '(at3g01560 : 203.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein of unknown function DUF1421 (InterPro:IPR010820), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 90069 Blast hits to 50370 proteins in 2078 species: Archae - 118; Bacteria - 11979; Metazoa - 33430; Fungi - 17845; Plants - 12302; Viruses - 1904; Other Eukaryotes - 12491 (source: NCBI BLink). & (gnl|cdd|70679 : 124.0) no description available & (reliability: 406.0) & (original description: Putative F4P13.11, Description = F4P13.11 protein, PFAM = PF07223)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold8904_27654-29949' '(at1g21200 : 202.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00000277ctg003_113-3227' '(at3g24860 : 97.4) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Alcohol dehydrogenase transcription factor Myb/SANT-like family protein (TAIR:AT2G44730.1); Has 901 Blast hits to 752 proteins in 148 species: Archae - 0; Bacteria - 32; Metazoa - 105; Fungi - 44; Plants - 531; Viruses - 61; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative At2g44730, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00000455ctg001_812-3606' '(at3g58630 : 189.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 121.0) no description available & (reliability: 378.0) & (original description: Putative NtSIP1, Description = 6b-interacting protein 1, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00006241ctg008_1-2526' '(at2g44730 : 110.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400020508, Description = BnaC03g24920D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00008750ctg005_1206-4699' '(at5g47660 : 160.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative glysoja_015156, Description = Trihelix transcription factor GT-2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00008848ctg026_1-4604' '(at5g14540 : 153.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 105.0) no description available & (reliability: 306.0) & (original description: Putative MTR_6g004930, Description = DNA-binding protein, putative, PFAM = PF07223)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00012607ctg003_78-2589' '(at3g24490 : 217.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 84.1) no description available & (reliability: 434.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00013434ctg024_6434-9526' '(at1g21200 : 181.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative TH9, Description = Sequence-specific DNA binding transcription factor, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00016882ctg020_1-4653' '(at5g05550 : 146.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 120.0) no description available & (reliability: 292.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00019263ctg003_1-2782' '(at1g76870 : 206.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative TH9, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00039552ctg000_1646-6529' '(at1g76890 : 232.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 155.0) no description available & (reliability: 464.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00053492ctg000_1-3526' '(at1g76880 : 124.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative ORF54, Description = GT-like trihelix DNA-binding protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00360_489574-497575' '(at4g31270 : 133.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G33550.1); Has 462 Blast hits to 461 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 436; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400029553, Description = , PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00361_456075-459908' '(at1g76890 : 111.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative ORF54, Description = GT-like trihelix DNA-binding protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00417_56316-59597' '(at1g21200 : 171.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00646_707820-710991' '(at1g76870 : 173.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative TH9, Description = Sequence-specific DNA binding transcription factor, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01150_576591-581471' '(at1g76890 : 231.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 156.0) no description available & (reliability: 462.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01247_605207-608408' '(at3g58630 : 189.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 117.0) no description available & (reliability: 378.0) & (original description: Putative TH18, Description = BnaA07g17950D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01448_212336-223198' '(at5g14540 : 191.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 122.0) no description available & (reliability: 382.0) & (original description: Putative F4P13.11, Description = F4P13.11 protein, PFAM = PF07223)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02085_1567185-1570607' '(at5g01380 : 149.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 85.2) no description available & (reliability: 298.0) & (original description: Putative GT1L, Description = Trihelix transcription factor GT-3b, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02156_793543-797934' '(at2g35640 : 173.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02361_693354-698144' '(at1g76880 : 193.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 162.0) no description available & (reliability: 386.0) & (original description: Putative BnaC02g23790D, Description = BnaC02g23790D protein, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02407_207164-210165' '(at2g44730 : 179.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 100.0) no description available & (reliability: 358.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02517_1513973-1523955' '(at3g24490 : 213.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 85.6) no description available & (reliability: 426.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03254_1364170-1368633' '(at5g14540 : 143.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative At5g14540, Description = AT5G14540 protein, PFAM = )' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03255_420477-423281' '(at5g47660 : 154.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative glysoja_015156, Description = Trihelix transcription factor GT-2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03441_46400-50877' '(at5g05550 : 180.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 123.0) no description available & (reliability: 360.0) & (original description: Putative tf, Description = Putative transcription factor, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03580_226781-232201' '(at5g03680 : 178.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 168.0) no description available & (reliability: 356.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03969_693294-697021' '(at2g35640 : 155.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative sh4, Description = BnaA09g25270D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04140_92969-97859' '(at1g21200 : 182.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BnaA08g21420D, Description = BnaA08g21420D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04456_121300-124475' '(at3g24490 : 196.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 89.5) no description available & (reliability: 392.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04731_343089-346913' '(at1g76880 : 209.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 130.0) no description available & (reliability: 418.0) & (original description: Putative DF1, Description = Duplicated homeodomain-like superfamily protein, putative, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04905_708710-721258' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 108.0) no description available & (reliability: 874.0) & (original description: Putative GT-4, Description = Trihelix transcription factor GT-4, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05357_120784-128856' '(at5g05550 : 180.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 116.0) no description available & (reliability: 360.0) & (original description: Putative tf, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05374_408989-413030' '(at5g47660 : 144.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative Ccrd_001209, Description = Homeodomain-like protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05469_304615-309368' '(at3g58630 : 125.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 116.0) no description available & (reliability: 250.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05956_67841-70890' '(at2g44730 : 121.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400020508, Description = BnaC03g24920D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf06087_607375-611229' '(at1g76880 : 212.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 128.0) no description available & (reliability: 424.0) & (original description: Putative BnaC02g23790D, Description = BnaC02g23790D protein, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf06869_360985-365544' '(at1g76880 : 225.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 164.0) no description available & (reliability: 450.0) & (original description: Putative GT2, Description = SANT DNA-binding domain-containing protein, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf07054_462552-479005' '(at5g01380 : 110.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 81.8) no description available & (reliability: 220.0) & (original description: Putative TF2, Description = Transcription factor TF2, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf07115_142953-153017' '(at1g76870 : 189.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative TH9, Description = Tubby-like F-box protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf08242_229423-232421' '(at2g44730 : 183.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 102.0) no description available & (reliability: 366.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf08772_128359-134270' '(at5g14540 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 132.0) no description available & (reliability: 300.0) & (original description: Putative At3g01560, Description = AT5G14540 protein, PFAM = PF07223)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf09109_114439-117467' '(at3g24860 : 104.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Alcohol dehydrogenase transcription factor Myb/SANT-like family protein (TAIR:AT2G44730.1); Has 901 Blast hits to 752 proteins in 148 species: Archae - 0; Bacteria - 32; Metazoa - 105; Fungi - 44; Plants - 531; Viruses - 61; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative , Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12127_2543-5886' '(at3g10040 : 210.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative TH9, Description = Tubby-like F-box protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12405_154392-157645' '(at1g21200 : 379.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative TH9, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12959_25615-28879' '(at5g01380 : 165.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 102.0) no description available & (reliability: 330.0) & (original description: Putative GT1L, Description = Trihelix transcription factor GT-3b, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf13146_34202-37790' '(at3g10040 : 246.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative At3g10040, Description = Putative uncharacterized protein At3g10040, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf15538_110386-117659' '(at4g17050 : 459.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83763 : 229.0) no description available & (reliability: 918.0) & (original description: Putative UGLYAH, Description = (S)-ureidoglycine aminohydrolase, PFAM = )' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf17872_138762-147790' '(at3g58630 : 126.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 119.0) no description available & (reliability: 252.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf31474_41709-47341' '(at5g03680 : 179.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 166.0) no description available & (reliability: 358.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T
'27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf37331_6639-12580' '(at3g54390 : 189.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: aspartate/glutamate/uridylate kinase family protein (TAIR:AT3G10030.1); Has 350 Blast hits to 341 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 2; Plants - 343; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 378.0) & (original description: Putative T12E18_80, Description = At3g54390, PFAM = PF13837)' T
'27.3.31' 'RNA.regulation of transcription.TUB transcription factor family' 'niben101scf04218_45247-51364' '(at1g16070 : 390.0) Member of TLP family; tubby like protein 8 (TLP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 6 (TAIR:AT1G47270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 216.0) no description available & (gnl|cdd|85281 : 105.0) no description available & (reliability: 780.0) & (original description: Putative TULP4, Description = AtTLP8, PFAM = PF01167)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold584_68518-74191' '(at1g30650 : 248.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 496.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold3868_61946-66176' '(at4g26640 : 142.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 284.0) & (original description: Putative WRK, Description = WRKY protein, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold10974_38248-46100' '(gnl|cdd|66760 : 100.0) no description available & (at2g34830 : 82.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative WRKY48, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold13670_3904-7906' '(at4g39410 : 85.5) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative WRKY19, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold18481_1346-6603' '(at4g31805 : 85.5) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400021201, Description = Putative uncharacterized protein Sb04g035860, PFAM = )' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold19118_4216-7442' '(at4g11070 : 184.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 368.0) & (original description: Putative WRKY1, Description = WRKY family transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold21109_11279-15458' '(at5g15130 : 170.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 100.0) no description available & (reliability: 340.0) & (original description: Putative WRKY37, Description = WRKY transcription factor 37, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold23176_7276-10633' '(at2g23320 : 187.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 374.0) & (original description: Putative WRKY15, Description = Probable WRKY transcription factor 15, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold28905_1-3704' '(at3g56400 : 126.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold35779_4280-7970' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 115.0) no description available & (reliability: 328.0) & (original description: Putative WRKY74, Description = WRKY transcription factor 74, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold44665_312-9047' '(at4g26640 : 370.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 122.0) no description available & (reliability: 740.0) & (original description: Putative tcw12, Description = WRKY protein, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold50344_5921-10023' '(at2g30590 : 305.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 610.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold50751_10510-13893' '(at5g49520 : 145.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 290.0) & (original description: Putative WRKY23, Description = WRKY transcription factor 23, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold51685_3483-7642' '(at1g80840 : 227.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 454.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold53679_8739-12060' '(at4g31550 : 269.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 538.0) & (original description: Putative WRKY11, Description = Probable WRKY transcription factor 11, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold54582_2374-8408' '(at2g44745 : 164.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 328.0) & (original description: Putative WRKY14, Description = WRKY transcription factor 14, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold55634_7380-10695' '(at4g24240 : 231.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 462.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold61242_7250-10885' '(at3g56400 : 136.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 81.1) no description available & (reliability: 272.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold66595_4075-8609' '(at1g62300 : 360.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 720.0) & (original description: Putative WRKY6, Description = WRKY transcription factor 6, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold72025_2640-5860' '(at1g29280 : 193.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 386.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold74241_1249-5508' '(at4g01250 : 187.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 374.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold78562_650-7452' '(at5g56270 : 280.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 560.0) & (original description: Putative WRKY05, Description = WRKY transcription factor 05, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold86340_1234-6019' '(at1g62300 : 316.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 110.0) no description available & (reliability: 632.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold90789_1-5311' '(at1g64000 : 170.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 340.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold93598_1-4802' '(at1g30650 : 246.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 492.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold97597_1-4343' '(at4g22070 : 321.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 642.0) & (original description: Putative WRKY1, Description = WRKY transcription factor 6, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold11_1981211-1985459' '(at2g30590 : 261.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 522.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold51_20250-24784' '(at1g62300 : 350.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 700.0) & (original description: Putative WRKY45, Description = WRKY transcription factor 45, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold111_93697-121613' '(at4g01250 : 172.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 344.0) & (original description: Putative WRKY18, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold482_216527-221814' '(at4g26640 : 328.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 656.0) & (original description: Putative WRKY9, Description = WRKY9, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold557_4394-11146' '(at2g47260 : 137.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 274.0) & (original description: Putative WRKY1, Description = Transcription factor CaWRKY1, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold645_101233-104548' '(at4g24240 : 214.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 428.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold667_478778-488088' '(at5g56270 : 270.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 540.0) & (original description: Putative WRKY06, Description = WRKY transcription factor 06, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold726_445072-448455' '(at5g49520 : 144.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 288.0) & (original description: Putative WRKY5, Description = WRKY5 transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold739_283922-294513' '(at4g26640 : 372.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 744.0) & (original description: Putative WRKY9, Description = WRKY9, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold939_528913-535253' '(at2g44745 : 160.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 320.0) & (original description: Putative WRKY38, Description = Transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1006_280798-284007' '(at2g44745 : 97.8) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative wrky1, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1054_348643-352802' '(at1g80840 : 227.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 454.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1850_132688-136574' '(at4g39410 : 85.1) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative WRKY5, Description = WRKY family transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold2029_142681-148298' '(at2g44745 : 160.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 110.0) no description available & (reliability: 320.0) & (original description: Putative WRKY12, Description = Probable WRKY transcription factor 12, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold2836_140236-146242' '(at2g47260 : 148.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 296.0) & (original description: Putative WRKY1, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3139_1099-5082' '(at1g80840 : 226.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 452.0) & (original description: Putative WRKY40, Description = Probable WRKY transcription factor 40, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3804_15353-119098' '(at1g18860 : 167.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 61 (WRKY61); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 5252 Blast hits to 3559 proteins in 289 species: Archae - 0; Bacteria - 31; Metazoa - 146; Fungi - 97; Plants - 3463; Viruses - 1; Other Eukaryotes - 1514 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 334.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3922_48821-53893' '(at1g64000 : 171.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 342.0) & (original description: Putative WRKY75, Description = Probable WRKY transcription factor 75, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4498_108669-111614' '(at4g11070 : 83.2) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative WRKY43, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4608_56312-60071' '(at5g43290 : 132.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 49 (WRKY49); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 57 (TAIR:AT1G69310.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 264.0) & (original description: Putative WRKY38, Description = WRKY transcription factor 38, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4894_5413-9565' '(at5g15130 : 196.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 392.0) & (original description: Putative WRKY59, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold6520_32643-35981' '(at3g01970 : 156.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 312.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00000894ctg004_5382-9176' '(at2g23320 : 202.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 404.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00003971ctg005_1-4941' '(at4g31805 : 89.7) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative PGSC0003DMG400021201, Description = Putative ovule protein, PFAM = )' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00004045ctg013_2355-8057' '(at1g13960 : 339.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 120.0) no description available & (reliability: 678.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005026ctg028_1-4056' '(at1g18860 : 168.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 61 (WRKY61); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 5252 Blast hits to 3559 proteins in 289 species: Archae - 0; Bacteria - 31; Metazoa - 146; Fungi - 97; Plants - 3463; Viruses - 1; Other Eukaryotes - 1514 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 336.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005150ctg007_10732-14183' '(at5g49520 : 143.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 286.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005295ctg005_3438-7807' '(at4g11070 : 127.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 96.5) no description available & (reliability: 254.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00006117ctg015_1-7999' '(at2g40740 : 139.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 98.8) no description available & (reliability: 278.0) & (original description: Putative WRKY5, Description = Transcription factor WRKY5, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00006913ctg015_4086-8510' '(at4g11070 : 113.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (reliability: 226.0) & (original description: Putative dreb2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF03106;PF00847)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00007783ctg005_2133-6857' '(at4g26440 : 216.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 34 (WRKY34); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5766 Blast hits to 3064 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5735; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 432.0) & (original description: Putative WRK, Description = Putative WRKY transcription factor 2, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00009765ctg000_1-21871' '(at4g01250 : 163.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 326.0) & (original description: Putative WRKY5, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00010549ctg000_4842-8917' '(at4g18170 : 142.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 28 (WRKY28); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 8 (TAIR:AT5G46350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 284.0) & (original description: Putative WRKY9, Description = WRKY super family protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00011161ctg002_4205-7882' '(at4g01250 : 177.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 354.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00013943ctg005_24028-27343' '(at4g24240 : 218.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 436.0) & (original description: Putative WRKY6, Description = WRKY protein, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00014402ctg016_6258-12264' '(at2g47260 : 133.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 266.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00014457ctg000_7530-11773' '(at1g68150 : 196.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 392.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00015934ctg004_2767-8243' '(at4g26640 : 324.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 648.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00016567ctg001_149-3410' '(at5g52830 : 120.0) Encodes a WRKY transcription factor WRKY27. Mutation in Arabidopsis WRKY27 results in delayed symptom development in response to the bacterial wilt pathogen Ralstonia solanacearum.; WRKY DNA-binding protein 27 (WRKY27); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 99.6) no description available & (reliability: 240.0) & (original description: Putative WRKY10, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00020203ctg002_1-9024' '(at5g56270 : 270.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 540.0) & (original description: Putative wrky7, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00021449ctg005_3873-6819' '(at5g24110 : 85.5) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 30 (WRKY30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative WRKY12, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00021674ctg008_1549-6523' '(at2g38470 : 303.0) Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.; WRKY DNA-binding protein 33 (WRKY33); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 7573 Blast hits to 4449 proteins in 326 species: Archae - 2; Bacteria - 120; Metazoa - 293; Fungi - 170; Plants - 5689; Viruses - 9; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 606.0) & (original description: Putative WRKY33, Description = Probable WRKY transcription factor 33, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00023308ctg001_5759-8889' '(gnl|cdd|66760 : 103.0) no description available & (at2g34830 : 84.3) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative WRKY5, Description = WRKY 5 transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00028408ctg006_5881-10402' '(at5g15130 : 171.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 342.0) & (original description: Putative WRKY37, Description = WRKY transcription factor 37, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00031394ctg002_2017-10868' '(at4g26640 : 368.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 736.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00033125ctg002_2616-8898' '(at1g69310 : 186.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 57 (WRKY57); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 372.0) & (original description: Putative WRKY57, Description = Probable WRKY transcription factor 57, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00038646ctg001_832-2995' '(at4g01250 : 112.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 97.6) no description available & (reliability: 224.0) & (original description: Putative WRKY10, Description = WRKY family transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00039679ctg005_3747-6748' '(at4g11070 : 189.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 378.0) & (original description: Putative WRKY53, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00045773ctg000_342-8231' '(at4g30935 : 270.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 32 (WRKY32); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5626 Blast hits to 3106 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 11; Plants - 5536; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 540.0) & (original description: Putative WRKY2, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00051343ctg005_20246-24021' '(at3g56400 : 127.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00060653ctg001_1-3698' '(at4g22070 : 324.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 648.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101ctg14444_1-2660' '(at3g01970 : 158.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 316.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101ctg16115_1105-5164' '(at1g80840 : 232.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 464.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00159_991406-996954' '(at2g04880 : 199.0) Encodes WRKY1, a member of the WRKY transcription factors in plants involved in disease resistance, abiotic stress, senescence as well as in some developmental processes. WRKY1 is involved in the salicylic acid signaling pathway. The crystal structure of the WRKY1 C-terminal domain revealed a zinc-binding site and identified the DNA-binding residues of WRKY1.; zinc-dependent activator protein-1 (ZAP1); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor family protein (TAIR:AT4G26640.2); Has 5746 Blast hits to 3098 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 5699; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 398.0) & (original description: Putative WRKY1, Description = DNA-binding protein 1, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00272_9612-15519' '(at1g13960 : 345.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 690.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00581_169076-172296' '(at1g29280 : 207.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 414.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00646_304087-308563' '(at1g68150 : 197.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 394.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00715_917577-921194' '(at1g80840 : 197.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 394.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00788_221754-299138' '(at4g31550 : 261.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 522.0) & (original description: Putative WRKY11, Description = Probable WRKY transcription factor 11, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00793_392377-404859' '(at2g47260 : 144.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 288.0) & (original description: Putative WRKY1, Description = Transcription factor CaWRKY1, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00905_422106-425375' '(at4g31550 : 249.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 498.0) & (original description: Putative WRKY17, Description = WRKY domain class transcription factor, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01062_598790-614752' '(at4g30935 : 275.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 32 (WRKY32); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5626 Blast hits to 3106 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 11; Plants - 5536; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 550.0) & (original description: Putative WRKY2, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01076_273667-278076' '(at4g11070 : 120.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 94.5) no description available & (reliability: 240.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01173_97663-103279' '(at5g56270 : 467.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 934.0) & (original description: Putative WRKY2, Description = Probable WRKY transcription factor 2, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01507_53240-57245' '(at1g29860 : 152.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 304.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01683_1462902-1471045' '(at4g39410 : 149.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 298.0) & (original description: Putative WRKY5, Description = WRKY domain class transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01721_842860-846181' '(at4g31550 : 264.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 528.0) & (original description: Putative WRKY17, Description = Probable WRKY transcription factor 17, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01727_202456-206635' '(at5g15130 : 176.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 99.6) no description available & (reliability: 352.0) & (original description: Putative ACRE126, Description = Avr9/Cf-9 rapidly elicited protein 126, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01782_1245440-1249234' '(at2g30590 : 317.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 634.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01785_692512-696130' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 328.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01833_105055-111061' '(at2g47260 : 148.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 296.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02145_895595-900400' '(at1g62300 : 348.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 696.0) & (original description: Putative WRKY6, Description = WRKY transcription factor 6, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02170_224540-228880' '(at1g62300 : 325.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 650.0) & (original description: Putative WRKY6, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02334_195185-199210' '(at4g23550 : 119.0) Encodes WRKY DNA-binding protein 29 (WRKY29).; WRKY29; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 3402 Blast hits to 2953 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3386; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 94.9) no description available & (reliability: 238.0) & (original description: Putative WRKY4, Description = WRKY super family protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02362_201162-205108' '(at2g38470 : 262.0) Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.; WRKY DNA-binding protein 33 (WRKY33); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 7573 Blast hits to 4449 proteins in 326 species: Archae - 2; Bacteria - 120; Metazoa - 293; Fungi - 170; Plants - 5689; Viruses - 9; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|66760 : 116.0) no description available & (reliability: 524.0) & (original description: Putative WRKY33, Description = Probable WRKY transcription factor 33, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02471_346343-365743' '(at2g44745 : 164.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 328.0) & (original description: Putative WRKY12, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02478_103489-112480' '(at2g40740 : 153.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 97.6) no description available & (reliability: 306.0) & (original description: Putative WRKY55, Description = WRKY transcription factor 55, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02499_257663-260403' '(at5g56270 : 113.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 226.0) & (original description: Putative WRKY79, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02511_444785-448242' '(at4g11070 : 145.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 100.0) no description available & (reliability: 290.0) & (original description: Putative WRKY2, Description = Transcriptional factor WRKY II, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02531_386992-390203' '(at1g29280 : 199.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 398.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02565_221511-226050' '(at4g11070 : 114.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative WRKY43, Description = WRKY transcription factor 55, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02565_221631-226055' '(at4g11070 : 112.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 224.0) & (original description: Putative dreb2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF03106;PF00847)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03009_334630-337987' '(at2g23320 : 170.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 340.0) & (original description: Putative WRKY15, Description = Probable WRKY transcription factor 15, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03070_601001-604821' '(at2g47260 : 118.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 236.0) & (original description: Putative WRKY1, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03239_74068-77425' '(at4g01250 : 177.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 354.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03298_553513-559046' '(at5g56270 : 463.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 926.0) & (original description: Putative WRKY2, Description = WRKYP2, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03348_50677-57259' '(at2g40740 : 148.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 296.0) & (original description: Putative WRKY5, Description = Transcription factor WRKY5, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03461_449430-458840' '(at1g13960 : 360.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 120.0) no description available & (reliability: 720.0) & (original description: Putative WRKY3, Description = Probable WRKY transcription factor 3, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03739_538814-549591' '(at3g56400 : 94.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03906_422142-426385' '(at1g68150 : 195.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 390.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03969_145120-149808' '(at4g31805 : 87.0) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400021201, Description = Putative uncharacterized protein Sb04g035860, PFAM = )' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03985_465858-469145' '(at4g11070 : 188.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 376.0) & (original description: Putative WRKY53, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04000_238011-241132' '(gnl|cdd|66760 : 102.0) no description available & (at2g34830 : 83.2) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative WRKY65, Description = WRKY transcription factor 65, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04011_560583-571193' '(at4g04450 : 337.0) member of WRKY Transcription Factor; Group II-b; WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 674.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04407_91573-98297' '(at5g15130 : 176.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 352.0) & (original description: Putative WRKY61, Description = Probable WRKY transcription factor 61, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04881_171837-175583' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 115.0) no description available & (reliability: 328.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04944_498542-501853' '(at1g80840 : 181.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 362.0) & (original description: Putative WRKY60, Description = Probable WRKY transcription factor 60, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05135_342466-346260' '(at2g23320 : 194.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 388.0) & (original description: Putative WRKY6, Description = WRKY protein, PFAM = PF03106;PF10533)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05387_646638-652311' '(at1g30650 : 236.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 472.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05584_4600-8501' '(at4g11070 : 110.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06026_124805-132166' '(at1g13960 : 309.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 119.0) no description available & (reliability: 618.0) & (original description: Putative WRKY31, Description = WRKY protein, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06091_409591-414251' '(at1g80840 : 228.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 95.7) no description available & (reliability: 456.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06603_351479-355114' '(at3g56400 : 136.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 80.7) no description available & (reliability: 272.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07063_44239-48271' '(at4g23810 : 188.0) member of WRKY Transcription Factor; Group III; WRKY53; FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G11070.1); Has 3150 Blast hits to 2715 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3139; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 376.0) & (original description: Putative WRKY1, Description = WRKY family transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07682_8129-20821' '(at4g26640 : 201.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 402.0) & (original description: Putative WRKY1, Description = DNA-binding protein 1, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07746_2527-14594' '(at4g26640 : 391.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 782.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08411_81095-86167' '(at1g64000 : 170.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 340.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08526_177329-196407' '(gnl|cdd|66760 : 94.2) no description available & (at5g64810 : 89.7) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 51 (WRKY51); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 50 (TAIR:AT5G26170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative WRKY12, Description = Putative WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08604_118806-122565' '(at5g43290 : 133.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 49 (WRKY49); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 57 (TAIR:AT1G69310.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 266.0) & (original description: Putative WRKY38, Description = WRKY transcription factor 38, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08811_4900-12127' '(at4g26640 : 403.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 119.0) no description available & (reliability: 806.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09057_112702-127029' '(at4g01250 : 174.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 348.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09107_243347-249847' '(at1g69310 : 179.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 57 (WRKY57); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 358.0) & (original description: Putative WRKY57, Description = Probable WRKY transcription factor 57, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09458_30409-34377' '(at4g23550 : 118.0) Encodes WRKY DNA-binding protein 29 (WRKY29).; WRKY29; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 3402 Blast hits to 2953 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3386; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 91.9) no description available & (reliability: 236.0) & (original description: Putative WRKY29, Description = Probable WRKY transcription factor 29, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09512_250862-254253' '(at4g01250 : 180.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 360.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09644_4656-11063' '(at5g15130 : 167.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 334.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09703_308133-312088' '(at5g49520 : 145.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 290.0) & (original description: Putative WRKY6, Description = WRKY domain class transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10043_166889-172364' '(at3g58710 : 185.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 69 (WRKY69); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 65 (TAIR:AT1G29280.1); Has 3304 Blast hits to 2854 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3290; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 99.2) no description available & (reliability: 370.0) & (original description: Putative WRKY69, Description = Probable WRKY transcription factor 69, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10228_80646-85038' '(at2g37260 : 224.0) Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function allele corresponding to the DSL QTL are associated with a reduction in interploidy lethality.; TRANSPARENT TESTA GLABRA 2 (TTG2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5962 Blast hits to 3069 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 5906; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 448.0) & (original description: Putative TTG2, Description = TTG2 protein, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10306_28035-31763' '(at5g26170 : 114.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 98.8) no description available & (reliability: 228.0) & (original description: Putative WRKY51, Description = Probable WRKY transcription factor 51, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10866_305440-313549' '(at1g13960 : 308.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 116.0) no description available & (reliability: 616.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf11288_300532-304614' '(at2g30590 : 271.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 542.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf11308_85059-89307' '(at2g30590 : 275.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 550.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF10533;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf12084_31196-96730' '(at5g26170 : 119.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 238.0) & (original description: Putative WRKY54, Description = WRKY protein, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf12726_2210-8474' '(at4g39410 : 162.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 324.0) & (original description: Putative WRKY5, Description = WRKY domain class transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf15671_180330-185482' '(at4g26640 : 195.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 390.0) & (original description: Putative wrky7, Description = WRKY protein, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf16332_37910-44502' '(at5g26170 : 122.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 244.0) & (original description: Putative WRKY51, Description = Probable WRKY transcription factor 51, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf17153_285-8985' '(at4g26640 : 323.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 122.0) no description available & (reliability: 646.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf18774_243168-247734' '(at5g13080 : 164.0) WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation.; WRKY DNA-binding protein 75 (WRKY75); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 45 (TAIR:AT3G01970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 328.0) & (original description: Putative wrky1, Description = WRKY transcription factor, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf24496_191986-200667' '(at5g15130 : 181.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 362.0) & (original description: Putative WRKY72, Description = Probable WRKY transcription factor 72, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf25537_11692-17807' '(at3g56400 : 132.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 83.0) no description available & (reliability: 264.0) & (original description: Putative WRKY4, Description = DNA-binding protein 4, PFAM = PF03106)' T
'27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf28100_91108-95400' '(at4g24240 : 220.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 440.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF03106;PF10533)' T
'27.3.33' 'RNA.regulation of transcription.TUB transcription factor family' '' ''
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold3911_32933-44155' '(at5g04560 : 338.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 676.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold21123_1-13924' '(at5g04560 : 694.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1388.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold22377_3374-7703' '(at5g66350 : 194.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 180.0) no description available & (reliability: 388.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold25246_24167-27555' '(at1g75520 : 166.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 162.0) no description available & (reliability: 300.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold50135_3470-8815' '(at5g66350 : 208.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 416.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold78187_1614-7036' '(at4g18460 : 235.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 205.0) no description available & (gnl|cdd|29648 : 195.0) no description available & (reliability: 470.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold88653_632-5259' '(at3g51060 : 193.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 370.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold91200_2111-5248' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 190.0) no description available & (reliability: 384.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold341_6778-10467' '(gnl|cdd|68707 : 185.0) no description available & (at3g51060 : 181.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142;PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold1076_149717-153062' '(gnl|cdd|68707 : 161.0) no description available & (at5g66350 : 157.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2070_152630-160456' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1-like protein, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2070_153243-160389' '(at1g48380 : 267.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2144_351967-355386' '(at3g51060 : 213.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 193.0) no description available & (reliability: 422.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2603_51361-58671' '(gnl|cdd|68707 : 164.0) no description available & (at1g75520 : 156.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold5110_32947-44169' '(at5g04560 : 337.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|28938 : 80.7) no description available & (reliability: 674.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 582.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 656.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00000963ctg003_1859-8485' '(q9m7j4|mfp1_tobac : 677.0) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (at3g16000 : 300.0) encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.; MAR binding filament-like protein 1 (MFP1); FUNCTIONS IN: DNA binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastid nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 259345 Blast hits to 118150 proteins in 3812 species: Archae - 3889; Bacteria - 64552; Metazoa - 100119; Fungi - 19969; Plants - 13824; Viruses - 1177; Other Eukaryotes - 55815 (source: NCBI BLink). & (gnl|cdd|35383 : 104.0) no description available & (reliability: 600.0) & (original description: Putative MFP1, Description = MAR-binding filament-like protein 1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00005070ctg014_16091-18546' '(at4g18460 : 226.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 200.0) no description available & (gnl|cdd|29648 : 192.0) no description available & (reliability: 452.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00010489ctg003_19091-33702' '(at5g04560 : 691.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1382.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00012545ctg009_117-3564' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 204.0) no description available & (reliability: 408.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00014030ctg030_3788-10885' '(gnl|cdd|68707 : 102.0) no description available & (at5g66350 : 89.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00015388ctg016_7755-10604' '(gnl|cdd|68707 : 209.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative SRS5, Description = Protein SHI RELATED SEQUENCE 5, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00030269ctg029_20831-26505' '(at4g25990 : 182.0) chloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes; CIL; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: chloroplast import apparatus 2 (TAIR:AT5G57180.2); Has 1342 Blast hits to 1342 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1336; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative CIA2, Description = Protein CHLOROPLAST IMPORT APPARATUS 2, PFAM = PF06203)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1082.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00151_894130-896769' '(at3g04280 : 99.4) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative RR24, Description = Response regulator 24, PFAM = PF00072)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00158_710564-715909' '(at5g66350 : 204.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 408.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00271_676835-679560' '(at5g26594 : 98.6) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family . It appears to be expressed in floral buds, mature flowers, and pollen. But, unlike the related ARR22 protein, it does not appear to be expressed at the seed:funiculus junction.; response regulator 24 (RR24); FUNCTIONS IN: two-component response regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, male gametophyte, flower, floral bud; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 22 (TAIR:AT3G04280.3); Has 46165 Blast hits to 45373 proteins in 2720 species: Archae - 261; Bacteria - 41094; Metazoa - 16; Fungi - 1330; Plants - 631; Viruses - 10; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35739 : 84.3) no description available & (reliability: 197.2) & (original description: Putative BnaA05g33120D, Description = BnaA05g33120D protein, PFAM = PF00072)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00383_15280-18793' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 202.0) no description available & (reliability: 406.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01025_1381314-1390275' '(gnl|cdd|68707 : 155.0) no description available & (at1g19790 : 145.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 7 (SRS7); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative SHI, Description = BnaC01g31760D protein, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01025_1385992-1389386' '(gnl|cdd|68707 : 155.0) no description available & (at1g75520 : 150.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01190_65222-68338' '(gnl|cdd|68707 : 162.0) no description available & (at5g66350 : 152.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01212_247713-253069' '(at4g18460 : 219.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 190.0) no description available & (gnl|cdd|29648 : 181.0) no description available & (reliability: 438.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03184_681838-687797' '(at5g57180 : 206.0) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.; chloroplast import apparatus 2 (CIA2); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 102 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 7; Plants - 54; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative CIA2, Description = Protein CHLOROPLAST IMPORT APPARATUS 2, PFAM = PF06203)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03184_704793-708353' '(at5g57180 : 120.0) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.; chloroplast import apparatus 2 (CIA2); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 102 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 7; Plants - 54; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative F383_07532, Description = Chloroplast import apparatus 2-like protein, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03221_59252-67078' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03221_59766-67011' '(at1g48380 : 270.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf04664_539797-543139' '(gnl|cdd|68707 : 166.0) no description available & (at1g75520 : 147.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf05044_263505-269594' '(q9m7j4|mfp1_tobac : 679.0) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (at3g16000 : 294.0) encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.; MAR binding filament-like protein 1 (MFP1); FUNCTIONS IN: DNA binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastid nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 259345 Blast hits to 118150 proteins in 3812 species: Archae - 3889; Bacteria - 64552; Metazoa - 100119; Fungi - 19969; Plants - 13824; Viruses - 1177; Other Eukaryotes - 55815 (source: NCBI BLink). & (gnl|cdd|35383 : 106.0) no description available & (gnl|cdd|31389 : 81.6) no description available & (reliability: 588.0) & (original description: Putative MFP1, Description = MAR-binding filament-like protein 1, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1082.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf07368_32970-45249' '(at2g36490 : 620.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1234.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf07368_34435-89874' '(at2g36490 : 474.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 98.7) no description available & (reliability: 924.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = )' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08273_614611-618852' '(at3g51060 : 174.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 164.0) no description available & (reliability: 338.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08305_91497-104134' '(at5g04560 : 659.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 89.9) no description available & (reliability: 1318.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08533_80577-94235' '(at5g04560 : 555.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08533_81625-97522' '(at5g04560 : 549.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1098.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf09512_526397-533190' '(at1g01510 : 717.0) Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction.; ANGUSTIFOLIA (AN); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 20556 Blast hits to 20427 proteins in 2617 species: Archae - 372; Bacteria - 13694; Metazoa - 624; Fungi - 929; Plants - 529; Viruses - 5; Other Eukaryotes - 4403 (source: NCBI BLink). & (gnl|cdd|35290 : 224.0) no description available & (gnl|cdd|84741 : 142.0) no description available & (reliability: 1434.0) & (original description: Putative AN, Description = C-terminal binding protein AN, PFAM = PF02826)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf13036_195636-207578' '(at5g04560 : 689.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.8) no description available & (reliability: 1378.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf14076_52017-64261' '(at2g36490 : 684.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 1362.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = PF15628;PF15629)' T
'27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf21969_490-3773' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 191.0) no description available & (reliability: 384.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold162_1463-33958' '(at1g05270 : 124.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold1304_79825-83959' '(at3g58120 : 233.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 466.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold2708_67420-75209' '(at1g43700 : 173.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 162.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 326.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold2708_68705-74703' '(at1g43700 : 139.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 128.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 264.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold7455_10926-14914' '(at1g35490 : 130.0) bZIP family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G58110.2); Has 455 Blast hits to 455 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 6; Plants - 414; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400009283, Description = Basic-leucine zipper domain-containing protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold13017_2110-10193' '(q99090|cprf2_petcr : 318.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 185.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF12498;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold16188_31147-36806' '(at1g58110 : 228.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold17747_19757-28471' '(o24160|tga21_tobac : 779.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at3g12250 : 384.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative TGA21, Description = TGACG-sequence-specific DNA-binding protein TGA-2.1, PFAM = PF14144;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold19521_1-8818' '(at5g44080 : 121.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold20757_24432-26863' '(at3g62420 : 127.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p24068|ocs1_maize : 88.2) Ocs element-binding factor 1 (OCSBF-1) - Zea mays (Maize) & (reliability: 254.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold26629_21456-25657' '(at2g16770 : 253.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative BZIP19, Description = Basic leucine zipper 19, PFAM = PF07716)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold36685_2940-20900' '(at1g27000 : 263.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 154.0) no description available & (reliability: 526.0) & (original description: Putative bZIP108, Description = BZIP transcription factor bZIP108, PFAM = PF07889)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold38578_10366-17085' '(at1g68640 : 381.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 369.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 762.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold55721_2053-5777' '(at2g17770 : 119.0) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 226.0) & (original description: Putative FDP, Description = bZIP transcription factor 27, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold57733_2276-11736' '(at1g06070 : 332.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 240.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 664.0) & (original description: Putative POSF21, Description = Probable transcription factor PosF21, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold63865_1330-7105' '(at5g24800 : 143.0) Encodes bZIP protein BZO2H2.; basic leucine zipper 9 (BZIP9); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G28770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative BZIP9, Description = Basic leucine zipper 9, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold75894_2066-5560' '(at2g36270 : 270.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative ABI5, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold82647_1-6069' '(at1g58110 : 189.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative BnaA01g21580D, Description = BnaA01g21580D protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold100876_1-2666' '(at2g42380 : 253.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP34; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, flower, carpel; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 10078 Blast hits to 4770 proteins in 174 species: Archae - 9; Bacteria - 38; Metazoa - 108; Fungi - 291; Plants - 1254; Viruses - 11; Other Eukaryotes - 8367 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 83.2) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 506.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold154_919136-924829' '(at1g06070 : 141.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 125.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold378_52050-59095' '(at1g03970 : 93.2) encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.; G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative bzip1, Description = Basic-leucine zipper, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold464_828638-831938' '(at2g36270 : 204.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ABI5, Description = BZIP transcription factor ABI5, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold1227_248700-254017' '(q99089|cprf1_petcr : 328.0) Common plant regulatory factor CPRF-1 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g46270 : 235.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 178.0) no description available & (reliability: 470.0) & (original description: Putative CPRF1, Description = Common plant regulatory factor 1, PFAM = PF07777;PF00170;PF16596)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold2348_226131-227710' '(at1g75390 : 124.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold4171_193204-202296' '(at1g43700 : 140.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 125.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold4232_12290-20373' '(q99090|cprf2_petcr : 321.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 186.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF00170;PF12498)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00002773ctg004_3764-6591' '(p14232|tga1a_tobac : 408.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 313.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bZIP83, Description = Transcription factor bZIP83, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00003200ctg000_25708-29028' '(at1g05270 : 147.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative MTR_4g046663, Description = TraB family protein, PFAM = PF01963)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00003200ctg002_1756-14394' '(at1g05270 : 211.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 84.5) no description available & (reliability: 422.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00004531ctg009_1-8924' '(at5g44080 : 106.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011087ctg002_3520-9490' '(at1g68640 : 382.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 364.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 764.0) & (original description: Putative PAN, Description = Transcription factor PERIANTHIA, PFAM = PF14144;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011400ctg005_1-6123' '(at1g05270 : 288.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 126.0) no description available & (gnl|cdd|38071 : 80.9) no description available & (reliability: 576.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = PF01963)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011493ctg001_3585-10575' '(at1g08320 : 292.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23923|hbp1b_wheat : 206.0) Transcription factor HBP-1b(c38) - Triticum aestivum (Wheat) & (reliability: 584.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00013515ctg003_187-4243' '(q41558|hbp1c_wheat : 284.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at3g12250 : 274.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00013636ctg017_178-4906' '(at4g38900 : 215.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 105.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00014247ctg009_12009-18362' '(q6s4p4|rf2b_orysa : 254.0) Transcription factor RF2b - Oryza sativa (Rice) & (at2g40620 : 247.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00017213ctg009_1947-7234' '(at4g38900 : 311.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 118.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 622.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00018112ctg014_5725-11437' '(at4g38900 : 206.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 116.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00029547ctg001_43540-45703' '(at3g14880 : 227.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaCnng70220D, Description = BnaC05g38650D protein, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00030796ctg000_11722-13559' '(at1g75390 : 124.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00031608ctg001_3120-9553' '(o24160|tga21_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at5g06950 : 317.0) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.; AHBP-1B; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 882 Blast hits to 882 proteins in 71 species: Archae - 0; Bacteria - 9; Metazoa - 3; Fungi - 6; Plants - 812; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative TGA2, Description = Transcription factor TGA2, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00033418ctg003_3101-8668' '(gnl|cdd|68357 : 268.0) no description available & (at1g21740 : 217.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative Sb02g031490, Description = Putative uncharacterized protein Sb02g031490, PFAM = PF04782;PF04783)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00056148ctg000_817-3666' '(at1g58110 : 133.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative bZIP17, Description = BZIP transcription factor family protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00043_308082-310672' '(at3g30530 : 125.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bZIP35, Description = BZIP transcription factor bZIP35, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00077_854242-859080' '(p14233|tga1b_tobac : 392.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g40950 : 355.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative TGA1B, Description = TGACG-sequence-specific DNA-binding protein TGA-1B, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00212_137862-141128' '(at3g14880 : 203.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BnaCnng70220D, Description = BnaC05g38650D protein, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00301_363759-371163' '(at5g06839 : 481.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3). & (o24160|tga21_tobac : 322.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 962.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00383_439385-441816' '(at1g75390 : 115.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00447_419525-425063' '(q99142|taf1_tobac : 392.0) Transcriptional activator TAF-1 (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g46270 : 225.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 173.0) no description available & (reliability: 450.0) & (original description: Putative TAF1, Description = Transcriptional activator TAF-1, PFAM = PF16596;PF07777;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00465_178252-185819' '(at1g68710 : 1835.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1554.0) no description available & (gnl|cdd|30822 : 433.0) no description available & (reliability: 3670.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16209;PF13246;PF16212)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00466_410357-415635' '(at4g38900 : 312.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 120.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 624.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00478_238080-248504' '(at5g24800 : 146.0) Encodes bZIP protein BZO2H2.; basic leucine zipper 9 (BZIP9); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G28770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BZIP9, Description = Basic leucine zipper 9, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00481_290961-299871' '(o24160|tga21_tobac : 787.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at3g12250 : 388.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative TGA21, Description = TGACG-sequence-specific DNA-binding protein TGA-2.1, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00508_953811-959095' '(at4g38900 : 248.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 135.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative bZIP64, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00525_537740-544458' '(at5g04840 : 197.0) bZIP protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At5g04840, Description = At5g04840, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00596_121417-132740' '(q41558|hbp1c_wheat : 385.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at3g12250 : 369.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00679_345516-364590' '(at1g05270 : 411.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 156.0) no description available & (gnl|cdd|38071 : 98.6) no description available & (reliability: 822.0) & (original description: Putative PGSC0003DMG400024333, Description = TraB family protein, PFAM = PF01963)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00773_589991-597203' '(at2g40620 : 235.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 229.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 470.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00959_138826-166152' '(at3g30530 : 129.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative bZIP3, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00960_421102-425544' '(at5g65210 : 417.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 348.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 834.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF14144;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01002_120628-124762' '(at3g58120 : 225.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative BZIP06, Description = Basic leucine zipper 6, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01305_439686-449599' '(at1g27000 : 286.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 153.0) no description available & (reliability: 572.0) & (original description: Putative bZIP109, Description = BZIP transcription factor bZIP109, PFAM = PF07889)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01607_369384-373749' '(at3g58120 : 244.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01970_711889-717232' '(at1g58110 : 226.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02360_148232-154317' '(at1g58110 : 224.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaA01g21580D, Description = BnaA01g21580D protein, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02436_491299-518445' '(at1g27000 : 277.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 157.0) no description available & (reliability: 554.0) & (original description: Putative bZIP109, Description = BZIP transcription factor bZIP109, PFAM = PF07889)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02510_238182-249660' '(at1g08320 : 465.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 322.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 930.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02621_454092-458086' '(at2g16770 : 238.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BZIP23, Description = Basic leucine zipper 23, PFAM = PF07716)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02694_307946-317586' '(at1g06070 : 334.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 240.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 668.0) & (original description: Putative POSF21, Description = Probable transcription factor PosF21, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02738_509384-511923' '(at3g30530 : 127.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bZIP42, Description = Basic leucine-zipper 42, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02835_7335-11580' '(at5g44080 : 93.6) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative bzip1, Description = G-box-binding factor 4, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02864_219498-222010' '(at1g75390 : 112.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BZIP44, Description = bZIP transcription factor 44, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02908_175364-180839' '(gnl|cdd|68357 : 270.0) no description available & (at1g21740 : 218.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative Sb02g031490, Description = Putative uncharacterized protein Sb02g031490, PFAM = PF04782;PF04783)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02917_53801-57500' '(at2g36270 : 300.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative areb1, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03494_531619-542515' '(at5g06839 : 488.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3). & (q41558|hbp1c_wheat : 318.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 976.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF07716;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03570_123303-131253' '(at1g06070 : 292.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 206.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03647_90963-95292' '(p14233|tga1b_tobac : 392.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g40950 : 337.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative TGA1B, Description = TGACG-sequence-specific DNA-binding protein TGA-1B, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03693_803331-824147' '(at4g36730 : 184.0) member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box; G-box binding factor 1 (GBF1); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 3891 Blast hits to 3827 proteins in 347 species: Archae - 8; Bacteria - 109; Metazoa - 1441; Fungi - 440; Plants - 1415; Viruses - 137; Other Eukaryotes - 341 (source: NCBI BLink). & (gnl|cdd|71217 : 147.0) no description available & (q99091|cprf3_petcr : 122.0) Light-inducible protein CPRF-3 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 368.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF00170;PF07777)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03830_223388-230891' '(at1g68640 : 379.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 367.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 758.0) & (original description: Putative PAN, Description = Transcription factor PERIANTHIA, PFAM = PF14144;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03851_70283-73391' '(at3g30530 : 114.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative bZIP3, Description = Ocs element-binding factor 1, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04240_250946-260980' '(at4g36730 : 197.0) member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box; G-box binding factor 1 (GBF1); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 3891 Blast hits to 3827 proteins in 347 species: Archae - 8; Bacteria - 109; Metazoa - 1441; Fungi - 440; Plants - 1415; Viruses - 137; Other Eukaryotes - 341 (source: NCBI BLink). & (gnl|cdd|71217 : 144.0) no description available & (q99091|cprf3_petcr : 130.0) Light-inducible protein CPRF-3 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 394.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF00170;PF07777)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04375_1277293-1280150' '(at3g14880 : 136.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative TaDOG1L1, Description = Putative uncharacterized protein TaDOG1L1, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04430_493806-496381' '(at3g30530 : 124.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BZIP43, Description = Basic leucine zipper 43, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04473_670800-673225' '(at3g62420 : 96.7) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative abz1, Description = Anaerobic basic leucine zipper protein, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04528_48074-50621' '(at3g14880 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400007068, Description = Tumor-related protein-like, PFAM = PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04614_698762-702355' '(at1g35490 : 132.0) bZIP family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G58110.2); Has 455 Blast hits to 455 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 6; Plants - 414; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative bZIP50, Description = Transcription factor RF2a, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04819_404006-406440' '(at3g62420 : 126.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05201_609499-629222' '(q41558|hbp1c_wheat : 373.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at5g06950 : 355.0) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.; AHBP-1B; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 882 Blast hits to 882 proteins in 71 species: Archae - 0; Bacteria - 9; Metazoa - 3; Fungi - 6; Plants - 812; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05304_131310-142902' '(at1g21740 : 516.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|68357 : 295.0) no description available & (reliability: 1032.0) & (original description: Putative BnaA06g15490D, Description = BnaA06g15490D protein, PFAM = PF04783;PF04782)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05310_471222-482916' '(at1g58110 : 230.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05430_3732-13061' '(at5g44080 : 125.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05491_261574-269266' '(at1g08320 : 500.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 315.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 1000.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05584_268426-273743' '(q99089|cprf1_petcr : 315.0) Common plant regulatory factor CPRF-1 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g46270 : 211.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 150.0) no description available & (reliability: 422.0) & (original description: Putative CPRF1, Description = Common plant regulatory factor 1, PFAM = PF07777;PF16596;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05690_190871-193380' '(at1g75390 : 131.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05845_279187-302050' '(q99090|cprf2_petcr : 324.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 179.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF12498;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05988_495954-514501' '(at1g27000 : 189.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 157.0) no description available & (reliability: 378.0) & (original description: Putative IDP96, Description = BZIP transcription factor bZIP108, PFAM = PF07889)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06094_820597-833509' '(at1g05270 : 321.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 152.0) no description available & (gnl|cdd|38071 : 99.0) no description available & (reliability: 642.0) & (original description: Putative PHYPADRAFT_4363, Description = Predicted protein, PFAM = PF01963)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06106_159445-162224' '(at2g16770 : 268.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative bZIP108, Description = Basic-leucine zipper (BZIP) transcription factor family, PFAM = PF07716)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06376_518409-521762' '(at2g17770 : 92.4) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 176.4) & (original description: Putative SPGB, Description = Self-pruning G-box protein, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07465_115219-120982' '(at4g38900 : 243.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 154.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07614_71183-73980' '(at2g16770 : 266.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative BZIP23, Description = Basic leucine zipper 23, PFAM = PF07716)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07778_491659-495346' '(at2g36270 : 300.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative ABI5, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07883_279800-283729' '(at2g42380 : 248.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP34; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, flower, carpel; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 10078 Blast hits to 4770 proteins in 174 species: Archae - 9; Bacteria - 38; Metazoa - 108; Fungi - 291; Plants - 1254; Viruses - 11; Other Eukaryotes - 8367 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07926_416831-423500' '(p14232|tga1a_tobac : 498.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 391.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 782.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08078_340587-346334' '(at4g38900 : 208.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 104.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 416.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08127_727840-730415' '(at3g30530 : 120.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative bZIP35, Description = BZIP transcription factor bZIP35, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08127_1242124-1249022' '(at1g68710 : 1842.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1575.0) no description available & (gnl|cdd|30822 : 420.0) no description available & (q6atv4|aca2_orysa : 82.8) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3684.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16212;PF13246;PF16209)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08814_47275-48840' '(at1g75390 : 125.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08973_20694-26934' '(p14232|tga1a_tobac : 631.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 424.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF14144;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf09716_288827-295440' '(at1g68640 : 378.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 353.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 756.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf11480_351687-354100' '(at3g62420 : 97.1) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative abz1, Description = Anaerobic basic leucine zipper protein, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13047_13288-24662' '(at1g08320 : 468.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 311.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 936.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13168_106469-111611' '(at5g65210 : 384.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 768.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF00170;PF14144)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13556_57081-59743' '(at2g22850 : 106.0) basic leucine-zipper 6 (bZIP6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 7 (TAIR:AT4G37730.1). & (reliability: 212.0) & (original description: Putative bZIP14, Description = BZIP transcription factor 14, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13865_38374-60555' '(at2g35530 : 357.0) Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.; basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23922|hbp1a_wheat : 175.0) Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat) & (gnl|cdd|71217 : 168.0) no description available & (reliability: 714.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF16596;PF07777;PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf14115_214136-223133' '(at2g35530 : 321.0) Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.; basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71217 : 171.0) no description available & (p23922|hbp1a_wheat : 151.0) Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat) & (reliability: 642.0) & (original description: Putative BZIP16, Description = bZIP transcription factor 16, PFAM = PF07777;PF00170;PF16596)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf15744_9583-15983' '(at5g11260 : 87.8) Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.; ELONGATED HYPOCOTYL 5 (HY5); FUNCTIONS IN: double-stranded DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), cAMP response element binding (CREB) protein (InterPro:IPR001630); BEST Arabidopsis thaliana protein match is: HY5-homolog (TAIR:AT3G17609.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative HY5, Description = Transcription factor HY5, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf16582_6119-8550' '(at3g62420 : 126.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p24068|ocs1_maize : 93.2) Ocs element-binding factor 1 (OCSBF-1) - Zea mays (Maize) & (reliability: 252.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf18662_12787-17273' '(at4g38900 : 345.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 127.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 690.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf20887_28737-41818' '(q6s4p4|rf2b_orysa : 250.0) Transcription factor RF2b - Oryza sativa (Rice) & (at2g40620 : 249.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf24096_86218-90261' '(at1g42990 : 85.9) AtbZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. GFP fusions containing the first 260 amino acids (AtbZIP60deltaC) are nuclear-localized. AtbZIP60 is upregulated by the addition of tunicamycin (ER stress response inductor), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress the protein is proteolyzed and the soluble part is translocalized into the nucleus. AtbZIP60deltaC can activate the promoters of the ER chaperones BiP1, BiP2 and BiP3 and CNX1 and CNX2 via binding to the ER stress response element (ERSE) and the plant unfolded protein response element(P-UPRE). It can also activate its own transcription.; basic region/leucine zipper motif 60 (BZIP60); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40950.1); Has 974 Blast hits to 974 proteins in 146 species: Archae - 0; Bacteria - 28; Metazoa - 334; Fungi - 54; Plants - 487; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative bZIP1, Description = BZIP transcription factor protein, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf24848_88093-95603' '(at1g03970 : 104.0) encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.; G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative bzip1, Description = Basic-leucine zipper, PFAM = PF00170)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf30320_53912-63278' '(q99090|cprf2_petcr : 318.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 185.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF00170;PF12498)' T
'27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf32851_84105-88805' '(at2g40950 : 367.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (p14233|tga1b_tobac : 169.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 734.0) & (original description: Putative BZIP17, Description = bZIP transcription factor 17, PFAM = PF00170)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'nbv0.5scaffold7232_79076-87011' '(at2g32940 : 999.0) Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing.; ARGONAUTE 6 (AGO6); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36259 : 652.0) no description available & (gnl|cdd|72942 : 431.0) no description available & (reliability: 1996.0) & (original description: Putative AGO6, Description = Protein argonaute 6, PFAM = PF08699;PF02170;PF16488;PF02171;PF16486)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben044scf00032670ctg008_12576-19103' '(at2g27040 : 762.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 492.0) no description available & (gnl|cdd|72942 : 322.0) no description available & (reliability: 1524.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171;PF02171)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf02159_82429-89655' '(at2g27040 : 793.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 519.0) no description available & (gnl|cdd|72942 : 352.0) no description available & (reliability: 1586.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf02159_82686-89392' '(at2g27040 : 831.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 554.0) no description available & (gnl|cdd|72942 : 381.0) no description available & (reliability: 1662.0) & (original description: Putative AGO4B, Description = Protein argonaute 4B, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf05519_103447-111964' '(at2g27040 : 1403.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 469.0) no description available & (reliability: 2806.0) & (original description: Putative AGO4, Description = Protein argonaute 4, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T
'27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf07937_279872-291299' '(at2g27040 : 1393.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 464.0) no description available & (reliability: 2786.0) & (original description: Putative AGO8, Description = Protein argonaute 8, PFAM = PF16486;PF02170;PF02171;PF16487;PF16488;PF08699)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold6076_57672-61045' '(at3g13850 : 165.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 131.0) no description available & (reliability: 330.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold7988_34760-39170' '(at2g28500 : 182.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 160.0) no description available & (reliability: 364.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold11371_17910-21298' '(at2g42430 : 169.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 338.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold13808_20179-23665' '(at2g42430 : 157.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 314.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold34405_10901-16579' '(at4g00210 : 194.0) LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 388.0) & (original description: Putative AS2, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold36982_14190-17372' '(at2g40470 : 209.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 166.0) no description available & (reliability: 418.0) & (original description: Putative LBD15, Description = LOB domain-containing protein 15, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold44975_12095-15027' '(at5g66870 : 223.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 446.0) & (original description: Putative BnaC03g38310D, Description = BnaC03g38310D protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold47340_1-1516' '(at1g31320 : 103.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 89.5) no description available & (reliability: 206.0) & (original description: Putative ASL4, Description = Lateral organ boundaries domain-containing protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold58963_5361-8919' '(gnl|cdd|66843 : 126.0) no description available & (at3g47870 : 125.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold62961_3685-7275' '(at1g07900 : 207.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 414.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold68137_3141-5611' '(at5g63090 : 192.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 148.0) no description available & (reliability: 384.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold81647_3851-6837' '(at5g66870 : 230.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 460.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold49_131379-134764' '(at2g40470 : 231.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 165.0) no description available & (reliability: 462.0) & (original description: Putative LBD15, Description = LOB domain-containing protein 15, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold261_214215-218589' '(at2g28500 : 183.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 366.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold467_352977-358729' '(at2g45420 : 223.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 169.0) no description available & (reliability: 446.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold1312_65339-71594' '(at2g42430 : 196.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 392.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold1931_219244-222920' '(at2g40470 : 210.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 420.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold2542_165575-170543' '(at1g07900 : 197.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 394.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold2686_273240-277092' '(at1g07900 : 190.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 380.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold3129_184427-186918' '(at5g63090 : 203.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 162.0) no description available & (reliability: 406.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold4005_31577-34059' '(at3g27650 : 191.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 382.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00006315ctg020_1-2895' '(at1g65620 : 201.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 170.0) no description available & (reliability: 402.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00008848ctg001_4849-7400' '(at3g27650 : 203.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 406.0) & (original description: Putative LOB, Description = Protein LATERAL ORGAN BOUNDARIES, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00009830ctg006_1303-4068' '(at2g30130 : 209.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 418.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020283ctg005_435-6234' '(at2g45420 : 202.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 172.0) no description available & (reliability: 404.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020394ctg019_3282-5800' '(at3g11090 : 164.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 328.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020909ctg005_1-2484' '(at3g26660 : 140.0) LOB domain-containing protein 24 (LBD24); INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 23 (TAIR:AT3G26620.1); Has 984 Blast hits to 979 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 984; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 129.0) no description available & (reliability: 280.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00025097ctg002_1920-4649' '(at3g49940 : 176.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 100.0) no description available & (reliability: 352.0) & (original description: Putative ASL37, Description = LOB domain-containing protein 39, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00027031ctg004_2212-5269' '(at5g66870 : 222.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 444.0) & (original description: Putative LBD36, Description = LOB domain-containing protein 36, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00030506ctg006_4451-7155' '(at3g02550 : 221.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 442.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00032341ctg011_312-4414' '(at2g28500 : 172.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 344.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00050483ctg000_9729-12786' '(at5g67420 : 241.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 482.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00055652ctg004_114-2437' '(at1g07900 : 120.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 86.1) no description available & (reliability: 240.0) & (original description: Putative ASL5, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00061093ctg000_1-2033' '(at1g31320 : 96.7) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 86.1) no description available & (reliability: 193.4) & (original description: Putative ASL4, Description = Lateral organ boundaries domain-containing protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101ctg14421_1-1905' '(at3g02550 : 227.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 104.0) no description available & (reliability: 454.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00024_362344-368006' '(at3g47870 : 156.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 130.0) no description available & (reliability: 312.0) & (original description: Putative BnaC01g42830D, Description = BnaC01g42830D protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00033_306524-308898' '(gnl|cdd|66843 : 106.0) no description available & (at3g47870 : 99.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400043103, Description = , PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00128_571001-573594' '(gnl|cdd|66843 : 118.0) no description available & (at3g47870 : 115.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00271_388328-395440' '(at1g31320 : 184.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 368.0) & (original description: Putative LBD3, Description = LOB domain-containing protein 3, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00339_417714-421887' '(at3g47870 : 126.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 125.0) no description available & (reliability: 252.0) & (original description: Putative AS2, Description = LOB domain-containing protein, putative, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00482_1022220-1026068' '(at1g07900 : 189.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 378.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00759_10788-14149' '(at1g65620 : 196.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 392.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00773_1474495-1477010' '(at3g11090 : 160.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 320.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00991_1393970-1396742' '(at5g67420 : 248.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 106.0) no description available & (reliability: 496.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01124_426313-429814' '(at2g40470 : 208.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 166.0) no description available & (reliability: 416.0) & (original description: Putative PtxtLBD15a, Description = LOB domain-containing protein 15, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01290_115952-119894' '(at2g40470 : 219.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 438.0) & (original description: Putative PtxtLBD15a, Description = LOB domain-containing protein 15, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01448_55957-58526' '(at3g27650 : 205.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 410.0) & (original description: Putative BnaC03g38310D, Description = BnaC03g38310D protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01626_213689-217285' '(at3g03760 : 199.0) LOB domain-containing protein 20 (LBD20); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 16 (TAIR:AT2G42430.1); Has 888 Blast hits to 883 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 872; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 153.0) no description available & (reliability: 398.0) & (original description: Putative ASL1, Description = LOB domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02017_388838-392256' '(at1g65620 : 212.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 424.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02045_251958-259042' '(at1g31320 : 217.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 172.0) no description available & (reliability: 434.0) & (original description: Putative LBD3, Description = LOB domain-containing protein 3, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02381_260549-263573' '(at3g02550 : 258.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 113.0) no description available & (reliability: 516.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02750_236176-238550' '(gnl|cdd|66843 : 104.0) no description available & (at3g47870 : 90.5) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400043103, Description = , PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02849_290737-294242' '(at5g66870 : 227.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 454.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03156_118216-121556' '(at2g30130 : 211.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 164.0) no description available & (reliability: 422.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03441_55252-57785' '(at3g11090 : 181.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 362.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03839_1077440-1191035' '(at3g13850 : 134.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 133.0) no description available & (reliability: 268.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03868_104087-107525' '(at3g02550 : 217.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 434.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03951_12731-18448' '(at2g45420 : 228.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 170.0) no description available & (reliability: 456.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03951_238102-242421' '(at4g00210 : 144.0) LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 144.0) no description available & (reliability: 288.0) & (original description: Putative ASL4, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04117_18349-21817' '(gnl|cdd|66843 : 152.0) no description available & (at2g42430 : 150.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04117_18364-21835' '(at2g42430 : 155.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 153.0) no description available & (reliability: 310.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04182_61640-64332' '(at5g06080 : 162.0) LOB domain-containing protein 33 (LBD33); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 145.0) no description available & (reliability: 324.0) & (original description: Putative ASL1, Description = LOB domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05272_410508-413954' '(at3g13850 : 146.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 131.0) no description available & (reliability: 292.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05749_73658-76460' '(at5g67420 : 215.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 430.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05917_155543-159628' '(at2g45410 : 176.0) LOB domain-containing protein 19 (LBD19); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 31 (TAIR:AT4G00210.1); Has 977 Blast hits to 972 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 977; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 148.0) no description available & (reliability: 352.0) & (original description: Putative ASL1, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06149_67380-74051' '(at2g42430 : 204.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 408.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06155_97080-100970' '(at1g07900 : 206.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 164.0) no description available & (reliability: 412.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06343_40085-42870' '(gnl|cdd|66843 : 162.0) no description available & (at3g58190 : 159.0) This gene contains two auxin-responsive element (AuxRE).; lateral organ boundaries-domain 29 (LBD29); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT2G42440.1); Has 858 Blast hits to 853 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 858; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative LBD29, Description = LOB domain-containing protein 29, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06435_224578-227388' '(at3g26620 : 136.0) LOB domain-containing protein 23 (LBD23); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 24 (TAIR:AT3G26660.1); Has 984 Blast hits to 979 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 984; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 121.0) no description available & (reliability: 272.0) & (original description: Putative AS2, Description = Lateral organ boundaries (LOB) domain protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06867_363675-366607' '(at5g66870 : 222.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 444.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06942_173569-176362' '(at2g30130 : 212.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 168.0) no description available & (reliability: 424.0) & (original description: Putative LBD12, Description = LOB domain-containing protein 12, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06986_365097-367039' '(at3g27650 : 197.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 394.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf07793_319940-322488' '(at5g63090 : 199.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 165.0) no description available & (reliability: 398.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf08508_86714-102532' '(at2g45410 : 183.0) LOB domain-containing protein 19 (LBD19); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 31 (TAIR:AT4G00210.1); Has 977 Blast hits to 972 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 977; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 366.0) & (original description: Putative AS2, Description = LOB domain-containing protein 16, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf08618_295157-299511' '(at1g07900 : 200.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 400.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf09191_216447-219594' '(at1g06280 : 134.0) LOB domain-containing protein 2 (LBD2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT1G65620.4); Has 899 Blast hits to 894 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66843 : 109.0) no description available & (reliability: 268.0) & (original description: Putative , Description = , PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf09365_145733-148826' '(at3g47870 : 161.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 130.0) no description available & (reliability: 322.0) & (original description: Putative BnaC01g42830D, Description = BnaC01g42830D protein, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf10262_128488-131281' '(at3g49940 : 225.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 104.0) no description available & (reliability: 450.0) & (original description: Putative ASL37, Description = LOB domain-containing protein 39, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf11836_122796-125744' '(at3g49940 : 228.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 456.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf11999_87033-89762' '(at3g49940 : 119.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative ASL39, Description = LOB domain-containing protein 39, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf14206_75990-79314' '(at1g07900 : 196.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 155.0) no description available & (reliability: 392.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T
'27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf15543_252819-255590' '(at5g67420 : 237.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 474.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.3scaffold12636_13375-31724' '(at1g76510 : 377.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1). & (gnl|cdd|37955 : 142.0) no description available & (gnl|cdd|47805 : 99.2) no description available & (reliability: 754.0) & (original description: Putative ARID5, Description = AT-rich interactive domain-containing protein 5, PFAM = PF00011;PF01388)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.5scaffold521_676376-697516' '(at2g17410 : 276.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 92.1) no description available & (gnl|cdd|47805 : 84.1) no description available & (reliability: 552.0) & (original description: Putative BnaA09g52810D, Description = BnaA09g52810D protein, PFAM = PF01388)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.5scaffold4360_3681-7319' '(at2g17410 : 176.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (reliability: 352.0) & (original description: Putative SIP1, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = )' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben044scf00016714ctg003_1-3618' '(at2g17410 : 169.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (reliability: 338.0) & (original description: Putative SIP1, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = )' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben044scf00049484ctg002_9042-15971' '(at1g04880 : 341.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 128.0) no description available & (gnl|cdd|47805 : 93.4) no description available & (reliability: 682.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF00505;PF01388)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf01177_172278-179644' '(at1g04880 : 341.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 128.0) no description available & (gnl|cdd|47805 : 92.6) no description available & (reliability: 682.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF01388;PF00505)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf03004_138955-169102' '(at2g17410 : 372.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 151.0) no description available & (gnl|cdd|47805 : 96.1) no description available & (reliability: 744.0) & (original description: Putative ARID1503, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = PF00011;PF01388)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf04235_26844-50532' '(at2g17410 : 302.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 111.0) no description available & (gnl|cdd|47805 : 94.2) no description available & (reliability: 604.0) & (original description: Putative ARID1503, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = PF01388)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf08065_109506-125192' '(at1g76510 : 356.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1). & (gnl|cdd|37955 : 142.0) no description available & (gnl|cdd|47805 : 98.8) no description available & (reliability: 712.0) & (original description: Putative BnaC08g19590D, Description = BnaC08g19590D protein, PFAM = PF01388;PF00011)' T
'27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf09459_306905-313544' '(at1g04880 : 332.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 124.0) no description available & (gnl|cdd|47805 : 91.8) no description available & (reliability: 664.0) & (original description: Putative HMGB10, Description = High mobility group B protein 10, PFAM = PF01388;PF00505)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.3scaffold27405_13360-21081' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 728.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold277_100982-122311' '(at2g22300 : 627.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 592.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1254.0) & (original description: Putative Sb01g044480, Description = Putative uncharacterized protein Sb01g044480, PFAM = PF12796;PF03859;PF00612;PF00612;PF01833)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold1525_226838-241257' '(at2g22300 : 815.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 475.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1630.0) & (original description: Putative CMTA3, Description = Calmodulin-binding transcription activator 3, PFAM = PF01833;PF00612;PF00612;PF12796;PF03859)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold4331_908-11188' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 748.0) & (original description: Putative TIP3, Description = TGB12K interacting protein 3, PFAM = PF12796)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben044scf00002812ctg013_20242-25759' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 746.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben044scf00009193ctg020_4024-11326' '(at3g16940 : 258.0) calmodulin binding;transcription regulators; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), IQ calmodulin-binding region (InterPro:IPR000048), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: calmodulin binding;transcription regulators (TAIR:AT4G16150.1); Has 5766 Blast hits to 3807 proteins in 309 species: Archae - 13; Bacteria - 199; Metazoa - 3382; Fungi - 247; Plants - 659; Viruses - 23; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35740 : 225.0) no description available & (gnl|cdd|67472 : 149.0) no description available & (reliability: 516.0) & (original description: Putative SR1, Description = Calmodulin-binding transcription activator 2, PFAM = PF03859)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf02016_21901-28906' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 726.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf02268_534813-550607' '(at2g22300 : 875.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 506.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1750.0) & (original description: Putative CMTA3, Description = Calmodulin-binding transcription activator 3, PFAM = PF12796;PF01833;PF03859;PF00612;PF00612)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf03082_157868-165765' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.4) no description available & (reliability: 726.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf07773_43899-61221' '(at5g64220 : 882.0) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ethylene induced calmodulin binding protein (TAIR:AT5G09410.2); Has 14537 Blast hits to 9093 proteins in 523 species: Archae - 46; Bacteria - 905; Metazoa - 8300; Fungi - 946; Plants - 937; Viruses - 67; Other Eukaryotes - 3336 (source: NCBI BLink). & (gnl|cdd|35740 : 683.0) no description available & (gnl|cdd|67472 : 210.0) no description available & (reliability: 1764.0) & (original description: Putative CMTA2, Description = Calmodulin-binding transcription activator 2, PFAM = PF03859;PF12796;PF00612;PF00612;PF01833)' T
'27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf09203_104785-122389' '(at4g16150 : 900.0) calmodulin binding;transcription regulators; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin binding;transcription regulators (TAIR:AT3G16940.1); Has 3526 Blast hits to 2387 proteins in 249 species: Archae - 2; Bacteria - 65; Metazoa - 2447; Fungi - 177; Plants - 543; Viruses - 8; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|35740 : 711.0) no description available & (gnl|cdd|67472 : 160.0) no description available & (reliability: 1800.0) & (original description: Putative CMTA5, Description = Calmodulin-binding transcription activator 5, PFAM = PF00612;PF00612;PF03859;PF12796)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.3scaffold22189_25801-31111' '(at4g29080 : 236.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 215.0) no description available & (q6at33|iaa19_orysa : 181.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 462.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.3scaffold26253_23495-27877' '(at2g33310 : 175.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 162.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 140.0) no description available & (reliability: 350.0) & (original description: Putative IAA11, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold848_187282-193003' '(at2g33310 : 139.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 123.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 102.0) no description available & (reliability: 278.0) & (original description: Putative IAA10, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold2154_38883-44134' '(at4g29080 : 213.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 177.0) no description available & (q6at33|iaa19_orysa : 167.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 424.0) & (original description: Putative AUX6, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold4059_197814-202934' '(at2g33310 : 222.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 166.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 142.0) no description available & (reliability: 444.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold5230_33307-37907' '(at4g14550 : 262.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 229.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 195.0) no description available & (reliability: 524.0) & (original description: Putative IAA7, Description = Auxin-responsive protein IAA7, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00012460ctg032_17974-22823' '(at2g33310 : 174.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 158.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 348.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00017553ctg024_2198-5934' '(at4g32280 : 109.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 98.2) no description available & (q5vrr0|iaa20_orysa : 86.3) Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative PGSC0003DMG400030896, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00043162ctg001_51-6459' '(at2g01200 : 129.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 90.9) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: Putative IAA32, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00104_270504-273580' '(gnl|cdd|66035 : 237.0) no description available & (o24542|ax22d_phaau : 207.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 206.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative AUX22E, Description = Auxin-induced protein 22E, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00286_160957-163484' '(at5g43700 : 224.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66035 : 223.0) no description available & (p32294|ax22b_phaau : 217.0) Auxin-induced protein 22B (Indole-3-acetic acid-induced protein ARG4) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 448.0) & (original description: Putative IAA4, Description = Auxin-responsive protein IAA4, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00286_349641-354056' '(at4g14550 : 299.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 256.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 232.0) no description available & (reliability: 598.0) & (original description: Putative IAA14, Description = Auxin-responsive protein IAA14, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01218_2275-7012' '(gnl|cdd|66035 : 102.0) no description available & (at4g32280 : 101.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5w670|iaa18_orysa : 88.2) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01438_889824-892973' '(at5g57420 : 138.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 33 (IAA33); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 1006 Blast hits to 1006 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative IAA33, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01696_444781-449839' '(at3g04730 : 289.0) early auxin-induced (IAA16); indoleacetic acid-induced protein 16 (IAA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 1752 Blast hits to 1751 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1751; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p13089|aux28_soybn : 260.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 236.0) no description available & (reliability: 578.0) & (original description: Putative IAA16, Description = Auxin-responsive protein IAA16, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02572_401379-404897' '(gnl|cdd|66035 : 207.0) no description available & (at1g04250 : 203.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 178.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative IAA1, Description = Auxin-responsive protein IAA1, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02572_446399-449645' '(p13088|aux22_soybn : 206.0) Auxin-induced protein AUX22 - Glycine max (Soybean) & (gnl|cdd|66035 : 204.0) no description available & (at3g15540 : 174.0) Primary auxin-responsive gene. Involved in the regulation stamen filaments development.; indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative AUX22, Description = Auxin-induced protein AUX22, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02635_43871-49100' '(at4g14550 : 300.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 265.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 227.0) no description available & (reliability: 600.0) & (original description: Putative IAA7, Description = Auxin-responsive protein IAA7, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02635_254271-257631' '(gnl|cdd|66035 : 251.0) no description available & (at5g43700 : 243.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p32294|ax22b_phaau : 238.0) Auxin-induced protein 22B (Indole-3-acetic acid-induced protein ARG4) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 486.0) & (original description: Putative IAA4, Description = Auxin-responsive protein IAA4, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02805_661739-671236' '(at2g01200 : 147.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 91.7) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative IAA32, Description = Auxin-responsive protein IAA32, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02805_663170-668147' '(at2g01200 : 141.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 89.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative IAA32, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf03068_333865-340531' '(at2g22670 : 325.0) IAA8 (IAA8) gene is auxin inducible.; indoleacetic acid-induced protein 8 (IAA8); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 9 (TAIR:AT5G65670.2). & (gnl|cdd|66035 : 239.0) no description available & (p0c132|iaa30_orysa : 211.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 650.0) & (original description: Putative iaa9, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf03701_171819-177101' '(at4g29080 : 255.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 219.0) no description available & (p0c132|iaa30_orysa : 203.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative IAA4, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf04252_205173-207983' '(gnl|cdd|66035 : 253.0) no description available & (o24542|ax22d_phaau : 243.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 223.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative AUX22D, Description = Auxin-induced protein 22D, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05232_219572-224035' '(gnl|cdd|66035 : 188.0) no description available & (at1g04250 : 176.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 167.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 352.0) & (original description: Putative IAA17, Description = Auxin-responsive protein IAA17, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05232_317478-325438' '(gnl|cdd|66035 : 191.0) no description available & (p32293|ax22a_phaau : 177.0) Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g52830 : 152.0) An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.; indole-3-acetic acid 6 (IAA6); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1737 Blast hits to 1736 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1736; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative AUX22C, Description = Auxin-induced protein 22C, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05627_48647-64992' '(at2g01200 : 147.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 85.9) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative IAA34, Description = Auxin-responsive protein IAA34, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05720_187657-190996' '(at4g32280 : 100.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 96.2) no description available & (q59aa1|iaa10_orysa : 89.4) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 200.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05929_382475-391160' '(at2g33310 : 213.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 167.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 137.0) no description available & (reliability: 426.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07230_80661-85912' '(at4g29080 : 244.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 196.0) no description available & (q5z749|iaa21_orysa : 186.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative IAA8, Description = Auxin-responsive protein IAA8, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07515_268530-273033' '(at4g32280 : 105.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 102.0) no description available & (p32293|ax22a_phaau : 90.9) Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 210.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07638_229485-236975' '(at4g32280 : 119.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 106.0) no description available & (q5w670|iaa18_orysa : 92.4) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative PGSC0003DMG400020478, Description = Auxin-responsive protein, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf08222_298551-302542' '(p13088|aux22_soybn : 205.0) Auxin-induced protein AUX22 - Glycine max (Soybean) & (gnl|cdd|66035 : 202.0) no description available & (at3g15540 : 166.0) Primary auxin-responsive gene. Involved in the regulation stamen filaments development.; indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative AUX22, Description = Auxin-induced protein AUX22, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf10124_165876-169253' '(at4g32280 : 106.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 98.9) no description available & (o24543|ax22e_phaau : 86.7) Auxin-induced protein 22E (Indole-3-acetic acid-induced protein ARG14) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 212.0) & (original description: Putative PGSC0003DMG400030896, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf10650_262165-267026' '(at3g16500 : 210.0) phytochrome-associated protein 1 (PAP1); phytochrome-associated protein 1 (PAP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 18 (TAIR:AT1G51950.1); Has 1982 Blast hits to 1978 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5w670|iaa18_orysa : 185.0) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (gnl|cdd|66035 : 120.0) no description available & (reliability: 420.0) & (original description: Putative IAA26, Description = Auxin-responsive protein IAA26, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf11535_200388-205788' '(at2g33310 : 179.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 161.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 358.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf12159_896602-899563' '(gnl|cdd|66035 : 231.0) no description available & (o24542|ax22d_phaau : 212.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 205.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative AUX22D, Description = Auxin-induced protein 22D, PFAM = PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf24330_36769-40395' '(gnl|cdd|66035 : 207.0) no description available & (at1g04250 : 206.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 181.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative IAA17, Description = Auxin-responsive protein IAA17, PFAM = PF02309;PF02309)' T
'27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf28593_87629-92462' '(at4g29080 : 268.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 237.0) no description available & (q5z749|iaa21_orysa : 225.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00015075ctg007_1-6795' '(at4g00260 : 121.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400013589, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00042832ctg005_1-3017' '(at3g18990 : 107.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00042884ctg001_108-4576' '(at3g18990 : 117.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400002784, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_121441-128484' '(at3g18990 : 121.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400046509, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_121477-164488' '(at3g18990 : 119.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400046509, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_213053-219516' '(at3g18990 : 129.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00905_913743-923631' '(at4g00260 : 134.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400043722, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf01209_514267-521495' '(at3g18990 : 99.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400014537, Description = Putative ovule protein, PFAM = PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf01784_761928-765737' '(at2g24645 : 90.1) Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G00260.1). & (reliability: 180.2) & (original description: Putative PGSC0003DMG403024846, Description = , PFAM = PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf02322_793553-801053' '(at3g18990 : 87.8) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = Putative B3 domain-containing protein-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf03502_29813-34144' '(at3g18990 : 114.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04436_664119-669140' '(at5g58280 : 195.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative At5g58280, Description = Putative B3 domain-containing protein At5g58280, PFAM = PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_173063-179426' '(at4g00260 : 84.7) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_197111-209131' '(at1g26680 : 162.0) transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: ovule, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 880 Blast hits to 315 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 864; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG402009541, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_226961-250938' '(at1g26680 : 188.0) transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: ovule, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 880 Blast hits to 315 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 864; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362;PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_258085-265276' '(at4g00260 : 150.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362;PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf05674_477850-481552' '(at4g33280 : 118.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G18990.1); Has 674 Blast hits to 576 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 674; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PGSC0003DMG400010079, Description = , PFAM = PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf06916_129897-151330' '(at3g18990 : 90.5) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400014537, Description = AP2/B3-like transcriptional factor family protein, putative, PFAM = PF02362;PF02362)' T
'27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf09698_227598-231925' '(at3g18990 : 99.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400014537, Description = Putative ovule protein, PFAM = PF02362)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.3scaffold25676_22023-28375' '(at2g44430 : 204.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BnaC04g22430D, Description = BnaC04g22430D protein, PFAM = PF00439;PF00249)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.3scaffold81788_1-6813' '(at1g20670 : 336.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 194.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 672.0) & (original description: Putative At1g76380, Description = At1g76380, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.5scaffold71_963772-969223' '(at1g20670 : 119.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 91.6) no description available & (gnl|cdd|47625 : 85.0) no description available & (reliability: 238.0) & (original description: Putative BnaC05g16030D, Description = BnaC05g16030D protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.5scaffold248_215985-228759' '(at1g58025 : 102.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400024917, Description = Histone acetyltransferase gcn5, PFAM = )' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00003113ctg003_32-3722' '(at2g44430 : 94.4) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative , Description = DNA-binding bromodomain-containing family protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00003266ctg013_1-6030' '(at1g20670 : 307.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 197.0) no description available & (gnl|cdd|47625 : 105.0) no description available & (reliability: 614.0) & (original description: Putative BnaC07g15240D, Description = BnaC07g15240D protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00006577ctg019_1-6495' '(at1g20670 : 335.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 194.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 670.0) & (original description: Putative BnaC08g19400D, Description = BnaC08g19400D protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00025632ctg008_2212-9259' '(at2g44430 : 221.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BnaA05g03970D, Description = BnaA05g03970D protein, PFAM = PF00249;PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00180_274888-280546' '(at1g61215 : 238.0) Bromodomain protein with a DNA binding motif; bromodomain 4 (BRD4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative PGSC0003DMG400022422, Description = Bromodomain protein, PFAM = PF00439;PF00249)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00712_1233216-1240151' '(at1g20670 : 313.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 205.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 626.0) & (original description: Putative BnaC07g15240D, Description = BnaC07g15240D protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00742_261886-267328' '(at1g61215 : 232.0) Bromodomain protein with a DNA binding motif; bromodomain 4 (BRD4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative PGSC0003DMG400022422, Description = Bromodomain protein, PFAM = PF00249;PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf03863_707863-713439' '(at3g57980 : 145.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G42150.1); Has 5050 Blast hits to 3932 proteins in 403 species: Archae - 12; Bacteria - 304; Metazoa - 2409; Fungi - 569; Plants - 345; Viruses - 12; Other Eukaryotes - 1399 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative TCM_024895, Description = DNA-binding bromodomain-containing protein, putative, PFAM = PF00249;PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf04071_75595-84160' '(at2g44430 : 210.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative At2g44430, Description = At2g44430, PFAM = PF00249;PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf04197_78284-86786' '(at1g58025 : 214.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (gnl|cdd|36687 : 113.0) no description available & (reliability: 428.0) & (original description: Putative BRD1503, Description = Bromodomain-containing factor 2, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf05822_371917-377368' '(at1g20670 : 123.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 92.0) no description available & (gnl|cdd|47625 : 84.6) no description available & (reliability: 246.0) & (original description: Putative BnaC05g16030D, Description = BnaC05g16030D protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf09417_52565-56883' '(at2g44430 : 95.5) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative , Description = DNA-binding bromodomain-containing family protein, PFAM = PF00439)' T
'27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf12935_50897-58612' '(at1g20670 : 331.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 191.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 662.0) & (original description: Putative At1g76380, Description = At1g76380, PFAM = PF00439)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold1510_15151-23824' '(at4g34430 : 486.0) Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).; CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36493 : 184.0) no description available & (gnl|cdd|34856 : 174.0) no description available & (reliability: 972.0) & (original description: Putative SWI3D, Description = SWI/SNF complex subunit SWI3D, PFAM = PF00569;PF16495;PF00249;PF04433)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold4124_25478-37097' '(at5g22750 : 1194.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (gnl|cdd|36219 : 497.0) no description available & (gnl|cdd|84584 : 188.0) no description available & (q7g8y3|isw2_orysa : 103.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2388.0) & (original description: Putative Os04g0177300, Description = Os04g0177300 protein, PFAM = PF00271;PF00176;PF13920)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold8510_1-9557' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 628.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold9938_1255-38370' '(at2g40770 : 1082.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 556.0) no description available & (gnl|cdd|30899 : 82.9) no description available & (reliability: 2164.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00097;PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold11746_1654-13622' '(at1g08600 : 380.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 284.0) no description available & (reliability: 760.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold20499_1-6867' '(at5g20420 : 1103.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 501.0) no description available & (gnl|cdd|30899 : 105.0) no description available & (reliability: 2206.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold24923_16184-27176' '(at1g49520 : 169.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0; Bacteria - 439; Metazoa - 696; Fungi - 468; Plants - 732; Viruses - 19; Other Eukaryotes - 843 (source: NCBI BLink). & (gnl|cdd|37157 : 115.0) no description available & (gnl|cdd|47490 : 106.0) no description available & (reliability: 338.0) & (original description: Putative At3g19080, Description = Upstream activation factor subunit spp27, PFAM = PF08766;PF02201;PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold26811_20780-26030' '(at2g33610 : 227.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 95.5) no description available & (reliability: 454.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold28724_12848-22437' '(at3g19080 : 219.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT1G49520.1); Has 4780 Blast hits to 2475 proteins in 346 species: Archae - 0; Bacteria - 702; Metazoa - 1207; Fungi - 636; Plants - 993; Viruses - 61; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37157 : 118.0) no description available & (gnl|cdd|47490 : 107.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0602170, Description = Upstream activation factor subunit UAF30, putative, PFAM = PF08766;PF02201;PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold29630_9266-25435' '(at1g50410 : 910.0) SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT3G20010.1); Has 25748 Blast hits to 15874 proteins in 1868 species: Archae - 87; Bacteria - 8136; Metazoa - 6127; Fungi - 5385; Plants - 2378; Viruses - 150; Other Eukaryotes - 3485 (source: NCBI BLink). & (gnl|cdd|36219 : 424.0) no description available & (gnl|cdd|30899 : 132.0) no description available & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1820.0) & (original description: Putative CHR28, Description = Helicase-like transcription factor CHR28, PFAM = PF13920;PF00271;PF00176;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold30046_1066-24208' '(at3g12810 : 1660.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 579.0) no description available & (gnl|cdd|84584 : 321.0) no description available & (q7g8y3|isw2_orysa : 271.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3320.0) & (original description: Putative PIE1, Description = DEAD/DEAH box helicase domain-containing protein PIE1, PFAM = PF07529;PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold33819_13592-26829' '(at2g46020 : 1479.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 682.0) no description available & (q7g8y3|isw2_orysa : 329.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 313.0) no description available & (reliability: 2958.0) & (original description: Putative chr122, Description = Chromatin complex subunit A, PFAM = PF00271;PF08880;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold44237_8797-25214' '(at3g54280 : 509.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 295.0) no description available & (reliability: 1018.0) & (original description: Putative v1g145718, Description = Predicted protein, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold49594_658-6910' '(at1g05120 : 362.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 362.0) no description available & (gnl|cdd|30899 : 141.0) no description available & (reliability: 724.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00097;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold54586_3650-12377' '(at4g22140 : 347.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 694.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold62326_9793-20802' '(at3g54280 : 1662.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 1231.0) no description available & (gnl|cdd|30899 : 307.0) no description available & (q7g8y3|isw2_orysa : 203.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3324.0) & (original description: Putative BTAF1, Description = TATA-binding protein-associated factor 172, PFAM = PF00176;PF12054;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold66185_1-6837' '(at4g22140 : 364.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 152.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 728.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold85078_1344-5868' '(at3g17590 : 237.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 128.0) no description available & (reliability: 474.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold89048_1139-8335' '(at3g06400 : 558.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 538.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 377.0) no description available & (gnl|cdd|84584 : 254.0) no description available & (reliability: 1116.0) & (original description: Putative isw, Description = ISWI chromatin-remodeling complex ATPase ISW2, PFAM = PF13892;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold138409_1-1359' '(at1g08600 : 101.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 202.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1127_200599-210291' '(at5g05130 : 996.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 403.0) no description available & (gnl|cdd|30899 : 206.0) no description available & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1992.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF08797;PF00097;PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1142_202126-212935' '(at2g18760 : 1379.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|35608 : 832.0) no description available & (gnl|cdd|30899 : 297.0) no description available & (q7g8y3|isw2_orysa : 237.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2758.0) & (original description: Putative CHR8, Description = Protein CHROMATIN REMODELING 8, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1142_205760-211502' '(at2g18760 : 825.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|35608 : 670.0) no description available & (gnl|cdd|84584 : 277.0) no description available & (q7g8y3|isw2_orysa : 215.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1650.0) & (original description: Putative ercc6, Description = DNA excision repair protein ERCC-6, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1857_134121-170819' '(gnl|cdd|35613 : 1382.0) no description available & (at3g54280 : 1227.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|30899 : 313.0) no description available & (q7g8y3|isw2_orysa : 211.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2454.0) & (original description: Putative mot1, Description = TATA-binding protein-associated factor 172, PFAM = PF12054;PF12054;PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2153_268508-310446' '(at1g08600 : 1468.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 1050.0) no description available & (gnl|cdd|84584 : 223.0) no description available & (q7g8y3|isw2_orysa : 166.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2936.0) & (original description: Putative ATRX, Description = Protein CHROMATIN REMODELING 20, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2153_294278-310413' '(at1g08600 : 464.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 304.0) no description available & (reliability: 928.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2159_169605-315776' '(at3g17590 : 243.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 172.0) no description available & (gnl|cdd|68430 : 108.0) no description available & (reliability: 486.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855;PF04855)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2304_21668-34257' '(at3g06400 : 1640.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1592.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1088.0) no description available & (gnl|cdd|84584 : 338.0) no description available & (reliability: 3280.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF09111;PF09110;PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2433_34224-84731' '(at2g40770 : 1627.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 798.0) no description available & (gnl|cdd|84584 : 100.0) no description available & (reliability: 3254.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00097;PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold3526_118272-122173' '(at5g14170 : 519.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 388.0) no description available & (reliability: 1038.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold4859_109013-136152' '(at5g63950 : 975.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 645.0) no description available & (gnl|cdd|30899 : 258.0) no description available & (q7g8y3|isw2_orysa : 200.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1950.0) & (original description: Putative CHR24, Description = Protein CHROMATIN REMODELING 24, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5023_58454-71691' '(at2g46020 : 2061.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 726.0) no description available & (q7g8y3|isw2_orysa : 326.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 311.0) no description available & (reliability: 4122.0) & (original description: Putative BRM, Description = ATP-dependent helicase BRM, PFAM = PF08880;PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5805_1-6867' '(at5g20420 : 1085.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 501.0) no description available & (gnl|cdd|30899 : 106.0) no description available & (reliability: 2170.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5868_32677-39552' '(at4g22140 : 287.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 121.0) no description available & (gnl|cdd|37097 : 98.2) no description available & (reliability: 574.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF00628;PF01426;PF03732)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold7303_41785-51047' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 137.0) no description available & (gnl|cdd|37097 : 124.0) no description available & (reliability: 628.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold7904_5047-23577' '(at1g08060 : 142.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold8314_37996-43181' '(at2g33610 : 226.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 96.7) no description available & (reliability: 452.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00002401ctg002_5227-10035' '(at3g06400 : 119.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 107.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative CHR11, Description = Putative chromatin-remodeling complex ATPase chain, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00003771ctg001_2293-17080' '(at1g08600 : 597.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 470.0) no description available & (gnl|cdd|84584 : 185.0) no description available & (q7g8y3|isw2_orysa : 85.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1194.0) & (original description: Putative ATRX, Description = ATRX, PFAM = PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00004464ctg012_1353-15710' '(at1g08600 : 282.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 189.0) no description available & (reliability: 564.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00006803ctg018_12995-15909' '(at1g21700 : 111.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative CHB4, Description = SWI/SNF complex subunit SWI3C, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00007499ctg001_13919-21284' '(at5g05130 : 996.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 402.0) no description available & (gnl|cdd|30899 : 206.0) no description available & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1992.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF00271;PF08797;PF00097;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00012517ctg003_1-6035' '(at1g05490 : 509.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (gnl|cdd|35611 : 411.0) no description available & (gnl|cdd|30899 : 144.0) no description available & (q7g8y3|isw2_orysa : 96.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1018.0) & (original description: Putative chr31, Description = SNF2 family amino-terminal protein, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00017381ctg012_7039-11930' '(at2g33610 : 336.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 221.0) no description available & (gnl|cdd|34856 : 170.0) no description available & (reliability: 672.0) & (original description: Putative SWI3B, Description = SWI/SNF complex subunit SWI3B, PFAM = PF04433;PF00249)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00023912ctg001_1749-4996' '(at1g21700 : 110.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative CHB4, Description = SWI/SNF complex subunit SWI3C, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00026866ctg014_1-2836' '(at5g66750 : 173.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 110.0) no description available & (reliability: 346.0) & (original description: Putative hells, Description = Lymphoid-specific helicase, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00026866ctg015_221-7435' '(at5g66750 : 834.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 562.0) no description available & (q7g8y3|isw2_orysa : 341.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 301.0) no description available & (reliability: 1668.0) & (original description: Putative CHA1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00027828ctg005_4790-12223' '(at2g16390 : 839.0) Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin.; DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1); Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91; Bacteria - 3564; Metazoa - 3285; Fungi - 3284; Plants - 1229; Viruses - 105; Other Eukaryotes - 1890 (source: NCBI BLink). & (gnl|cdd|35611 : 473.0) no description available & (gnl|cdd|30899 : 120.0) no description available & (q7g8y3|isw2_orysa : 80.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1678.0) & (original description: Putative CHR34, Description = Chromatin remodeling 34, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031054ctg003_405-6657' '(gnl|cdd|36220 : 377.0) no description available & (at1g05120 : 376.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|30899 : 142.0) no description available & (reliability: 752.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00097;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031397ctg007_1-6095' '(at3g17590 : 242.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 170.0) no description available & (gnl|cdd|68430 : 106.0) no description available & (reliability: 484.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855;PF04855)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031781ctg000_1-13026' '(at2g46020 : 1447.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 679.0) no description available & (q7g8y3|isw2_orysa : 330.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 313.0) no description available & (reliability: 2894.0) & (original description: Putative chr122, Description = Chromatin complex subunit A, PFAM = PF08880;PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00032939ctg001_7255-35016' '(at2g40770 : 1376.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 641.0) no description available & (gnl|cdd|84584 : 93.4) no description available & (reliability: 2752.0) & (original description: Putative At2g40770, Description = RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein, PFAM = PF00176;PF00097)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00059102ctg000_1-14964' '(at5g63950 : 791.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 536.0) no description available & (gnl|cdd|30899 : 252.0) no description available & (q7g8y3|isw2_orysa : 208.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1582.0) & (original description: Putative PICH, Description = DNA excision repair protein ERCC-6-like, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00059239ctg002_1-2050' '(at5g66750 : 121.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative CHA1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF13892)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00293_407677-426773' '(at5g63950 : 992.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 640.0) no description available & (gnl|cdd|30899 : 248.0) no description available & (q7g8y3|isw2_orysa : 206.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1984.0) & (original description: Putative CHR24, Description = Protein CHROMATIN REMODELING 24, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00811_558118-561149' '(at1g05120 : 217.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 153.0) no description available & (reliability: 434.0) & (original description: Putative At1g02670, Description = Putative ovule protein, PFAM = PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00988_357147-398942' '(at1g08060 : 377.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (gnl|cdd|35605 : 238.0) no description available & (q7g8y3|isw2_orysa : 120.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 86.5) no description available & (reliability: 754.0) & (original description: Putative Sb10g000300, Description = Putative helicase protein MOM1-like, PFAM = PF00385;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf01745_528678-540202' '(at1g05490 : 511.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (gnl|cdd|35611 : 412.0) no description available & (gnl|cdd|30899 : 138.0) no description available & (q7g8y3|isw2_orysa : 97.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1022.0) & (original description: Putative CHR31, Description = SNF2 family amino-terminal protein, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf01943_529728-549144' '(at4g22140 : 350.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 148.0) no description available & (gnl|cdd|37097 : 125.0) no description available & (reliability: 700.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02145_305559-315499' '(at4g22140 : 349.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 698.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02243_170132-173533' '(at2g18760 : 234.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative CHR8, Description = DNA repair and recombination protein RAD26, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02300_23353-61283' '(at2g40770 : 1634.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 791.0) no description available & (gnl|cdd|84584 : 93.4) no description available & (reliability: 3268.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00271;PF00176;PF00097)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_700213-758342' '(at1g08600 : 1084.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 1015.0) no description available & (gnl|cdd|84584 : 227.0) no description available & (q7g8y3|isw2_orysa : 173.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2168.0) & (original description: Putative ATRX, Description = Protein CHROMATIN REMODELING 20, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_700969-735680' '(at1g08600 : 927.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 743.0) no description available & (gnl|cdd|30899 : 219.0) no description available & (q7g8y3|isw2_orysa : 166.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1854.0) & (original description: Putative atrx, Description = Transcriptional regulator ATRX, PFAM = PF00271;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_732595-747595' '(gnl|cdd|36233 : 254.0) no description available & (at1g08600 : 245.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 490.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02752_502737-521035' '(at3g06400 : 1652.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1627.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1094.0) no description available & (gnl|cdd|84584 : 334.0) no description available & (reliability: 3304.0) & (original description: Putative CHR17, Description = ISWI chromatin-remodeling complex ATPase CHR17, PFAM = PF00176;PF00271;PF09111;PF09110)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02922_116725-142034' '(at5g07810 : 748.0) SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), HNH endonuclease (InterPro:IPR002711), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor18 (TAIR:AT1G48310.1); Has 16904 Blast hits to 14939 proteins in 1977 species: Archae - 110; Bacteria - 5677; Metazoa - 3556; Fungi - 3371; Plants - 1315; Viruses - 123; Other Eukaryotes - 2752 (source: NCBI BLink). & (gnl|cdd|36218 : 507.0) no description available & (gnl|cdd|30899 : 161.0) no description available & (reliability: 1496.0) & (original description: Putative BnaC03g03250D, Description = BnaC03g03250D protein, PFAM = PF00271;PF00176;PF01844)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02968_503051-512631' '(at4g22140 : 363.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 152.0) no description available & (gnl|cdd|37097 : 125.0) no description available & (reliability: 726.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03080_237147-241585' '(at1g49520 : 221.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0; Bacteria - 439; Metazoa - 696; Fungi - 468; Plants - 732; Viruses - 19; Other Eukaryotes - 843 (source: NCBI BLink). & (gnl|cdd|37157 : 122.0) no description available & (gnl|cdd|35090 : 107.0) no description available & (reliability: 442.0) & (original description: Putative PGSC0003DMG400025800, Description = Upstream activation factor subunit spp27, PFAM = PF02201;PF02201;PF08766)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03302_359517-381425' '(at1g08060 : 141.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03424_61298-66939' '(at2g33610 : 339.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 219.0) no description available & (gnl|cdd|34856 : 169.0) no description available & (reliability: 678.0) & (original description: Putative SWI3B, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249;PF04433)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03613_75571-84166' '(at4g22140 : 316.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 632.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03710_1078228-1092727' '(at1g21700 : 626.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (gnl|cdd|36493 : 293.0) no description available & (gnl|cdd|34856 : 166.0) no description available & (reliability: 1252.0) & (original description: Putative SWI3C, Description = SWI/SNF complex subunit SWI3C, PFAM = PF16495;PF00249;PF04433)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04011_659824-680903' '(at1g05120 : 1061.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 728.0) no description available & (gnl|cdd|30899 : 141.0) no description available & (q7g8y3|isw2_orysa : 92.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2122.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00271;PF13445;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04145_123867-137356' '(at5g66750 : 1021.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 681.0) no description available & (q7g8y3|isw2_orysa : 410.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 307.0) no description available & (reliability: 2042.0) & (original description: Putative DDM1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04544_79692-92084' '(at3g12810 : 1428.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 565.0) no description available & (gnl|cdd|84584 : 318.0) no description available & (q7g8y3|isw2_orysa : 268.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2856.0) & (original description: Putative swr1, Description = Helicase SWR1, PFAM = PF00176;PF07529;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04778_28446-37364' '(at4g34430 : 470.0) Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).; CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36493 : 174.0) no description available & (gnl|cdd|34856 : 166.0) no description available & (reliability: 940.0) & (original description: Putative SWI3D, Description = SWI/SNF complex subunit SWI3D, PFAM = PF00569;PF00249;PF04433;PF16495)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04861_73520-85359' '(at2g16390 : 887.0) Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin.; DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1); Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91; Bacteria - 3564; Metazoa - 3285; Fungi - 3284; Plants - 1229; Viruses - 105; Other Eukaryotes - 1890 (source: NCBI BLink). & (gnl|cdd|35611 : 479.0) no description available & (gnl|cdd|30899 : 127.0) no description available & (reliability: 1774.0) & (original description: Putative DRD1, Description = Protein CHROMATIN REMODELING 35, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf05610_42265-53816' '(at5g66750 : 991.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 682.0) no description available & (q7g8y3|isw2_orysa : 428.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 299.0) no description available & (reliability: 1982.0) & (original description: Putative CHA1, Description = Putative global transcription activator SNF2L1, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf05750_465223-469127' '(at5g14170 : 523.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 390.0) no description available & (reliability: 1046.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06151_285933-297352' '(at3g06010 : 1377.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (gnl|cdd|35607 : 985.0) no description available & (q7g8y3|isw2_orysa : 452.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 328.0) no description available & (reliability: 2754.0) & (original description: Putative CHR12, Description = Probable ATP-dependent DNA helicase CHR12, PFAM = PF00271;PF00176;PF14619)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06378_281848-289698' '(at5g20420 : 1102.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 500.0) no description available & (gnl|cdd|30899 : 105.0) no description available & (reliability: 2204.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06435_358014-376510' '(at2g44980 : 1078.0) SNF2 domain-containing protein / helicase domain-containing protein; FUNCTIONS IN: transcription regulator activity, helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins in 1958 species: Archae - 101; Bacteria - 5047; Metazoa - 3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other Eukaryotes - 2964 (source: NCBI BLink). & (gnl|cdd|35606 : 677.0) no description available & (q7g8y3|isw2_orysa : 362.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 277.0) no description available & (reliability: 2156.0) & (original description: Putative CHR10, Description = Probable helicase CHR10, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06588_208546-222972' '(at1g61140 : 919.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 496.0) no description available & (gnl|cdd|30899 : 136.0) no description available & (q7g8y3|isw2_orysa : 90.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1838.0) & (original description: Putative IDP2558, Description = Putative SNF2-domain/RING finger domain/helicase domain protein, PFAM = PF00176;PF00271;PF00097)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07327_289421-302518' '(at2g46020 : 1446.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 679.0) no description available & (q7g8y3|isw2_orysa : 330.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 314.0) no description available & (reliability: 2892.0) & (original description: Putative brm, Description = ATP-dependent helicase BRM, PFAM = PF00176;PF00271;PF08880)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07688_216632-236044' '(at1g08060 : 100.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07817_123501-135045' '(at3g19080 : 226.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT1G49520.1); Has 4780 Blast hits to 2475 proteins in 346 species: Archae - 0; Bacteria - 702; Metazoa - 1207; Fungi - 636; Plants - 993; Viruses - 61; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37157 : 120.0) no description available & (gnl|cdd|47490 : 106.0) no description available & (reliability: 430.0) & (original description: Putative RCOM_0602170, Description = Upstream activation factor subunit UAF30, putative, PFAM = PF08766;PF02201;PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08156_772686-825890' '(at3g54280 : 2512.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 1534.0) no description available & (gnl|cdd|30899 : 316.0) no description available & (q7g8y3|isw2_orysa : 212.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 5024.0) & (original description: Putative BTAF1, Description = TATA-binding protein-associated factor BTAF1, PFAM = PF12054;PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08156_814769-818153' '(at3g54280 : 367.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 193.0) no description available & (reliability: 734.0) & (original description: Putative Mot1, Description = TATA-binding protein-associated factor BTAF1, PFAM = PF12054)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08667_56788-73533' '(at3g54460 : 1399.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36219 : 118.0) no description available & (gnl|cdd|84584 : 90.0) no description available & (reliability: 2798.0) & (original description: Putative At3g54460, Description = F-box protein At3g54460, PFAM = PF00271;PF00176;PF00646;PF07496)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08936_846131-853798' '(at2g47620 : 322.0) Homologous to yeast SWI3 and a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3C, the other two members of the SWI3 family.; SWITCH/sucrose nonfermenting 3A (SWI3A); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 887 Blast hits to 703 proteins in 193 species: Archae - 0; Bacteria - 3; Metazoa - 393; Fungi - 212; Plants - 178; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36493 : 216.0) no description available & (gnl|cdd|34856 : 168.0) no description available & (reliability: 644.0) & (original description: Putative SWI3A, Description = SWI/SNF complex subunit SWI3A, PFAM = PF16495;PF00249;PF04433)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf09150_65892-80326' '(at3g06400 : 1535.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1488.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1007.0) no description available & (gnl|cdd|84584 : 339.0) no description available & (reliability: 3070.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF00271;PF09111;PF09110;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf09416_114019-125638' '(at5g22750 : 1479.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (gnl|cdd|36219 : 512.0) no description available & (gnl|cdd|84584 : 188.0) no description available & (q7g8y3|isw2_orysa : 103.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2958.0) & (original description: Putative At5g22750, Description = Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2, PFAM = PF00271;PF13920;PF00176;PF08797)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf10287_247990-255150' '(at4g22140 : 322.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 112.0) no description available & (reliability: 644.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF00628;PF01426;PF03732)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf10329_296077-318019' '(at1g50410 : 898.0) SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT3G20010.1); Has 25748 Blast hits to 15874 proteins in 1868 species: Archae - 87; Bacteria - 8136; Metazoa - 6127; Fungi - 5385; Plants - 2378; Viruses - 150; Other Eukaryotes - 3485 (source: NCBI BLink). & (gnl|cdd|36219 : 419.0) no description available & (gnl|cdd|30899 : 131.0) no description available & (q7g8y3|isw2_orysa : 89.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1796.0) & (original description: Putative CHR28, Description = Helicase-like transcription factor CHR28, PFAM = PF00271;PF13920;PF00176;PF00176)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf11774_151797-160151' '(at5g05130 : 1004.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 405.0) no description available & (gnl|cdd|30899 : 208.0) no description available & (q7g8y3|isw2_orysa : 98.2) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF08797;PF00176;PF00097;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf12953_119198-129174' '(at3g17590 : 355.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 218.0) no description available & (gnl|cdd|68430 : 118.0) no description available & (reliability: 710.0) & (original description: Putative BSH, Description = Chromatin structure-remodeling complex protein BSH, PFAM = PF04855;PF04855)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf13057_13493-17895' '(at5g14170 : 660.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 442.0) no description available & (reliability: 1320.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf14374_89613-108449' '(at1g48310 : 855.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (gnl|cdd|36218 : 456.0) no description available & (gnl|cdd|30899 : 165.0) no description available & (q7g8y3|isw2_orysa : 114.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1710.0) & (original description: Putative zranb3, Description = Zranb3 protein, PFAM = PF00176;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf14830_21434-51194' '(at3g12810 : 1902.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 575.0) no description available & (gnl|cdd|84584 : 321.0) no description available & (q7g8y3|isw2_orysa : 270.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3804.0) & (original description: Putative PIE1, Description = DEAD/DEAH box helicase domain-containing protein PIE1, PFAM = PF00176;PF07529;PF00271)' T
'27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf18660_1784-6951' '(at2g33610 : 226.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 96.7) no description available & (reliability: 452.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.3scaffold28250_1-16271' '(at4g19020 : 911.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 692.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 144.0) no description available & (reliability: 1822.0) & (original description: Putative CMT2, Description = Chromomethylase 2, PFAM = PF00385;PF00145;PF01426)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.3scaffold53229_1938-7713' '(at5g25480 : 378.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 216.0) no description available & (gnl|cdd|73191 : 159.0) no description available & (reliability: 756.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold822_382455-389942' '(at5g14620 : 580.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1160.0) & (original description: Putative drm, Description = Domains rearranged methyltransferase, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold2670_61300-67159' '(at5g14620 : 597.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1194.0) & (original description: Putative DRM2, Description = DNA (cytosine-5)-methyltransferase DRM2, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold7069_1-43850' '(at5g15380 : 263.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative DRM1, Description = DNA (Cytosine-5)-methyltransferase DRM2, PFAM = )' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00005591ctg008_9746-17269' '(at5g25480 : 465.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 278.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 930.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00005591ctg008_10970-17266' '(at5g25480 : 372.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 221.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 744.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00006473ctg000_3067-8115' '(at5g15380 : 568.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1136.0) & (original description: Putative DRM2, Description = DRM2, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00013554ctg009_11426-19385' '(at3g17310 : 437.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 164 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative DRM2a, Description = Domain rearranged methyltransferase, PFAM = )' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00029845ctg003_1-8170' '(q9axt8|cmt1_maize : 799.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (at1g69770 : 788.0) Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.; chromomethylase 3 (CMT3); FUNCTIONS IN: DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 2 (TAIR:AT4G19020.1); Has 4337 Blast hits to 3739 proteins in 974 species: Archae - 208; Bacteria - 2545; Metazoa - 230; Fungi - 161; Plants - 416; Viruses - 30; Other Eukaryotes - 747 (source: NCBI BLink). & (gnl|cdd|72856 : 195.0) no description available & (reliability: 1576.0) & (original description: Putative cmt3, Description = Chromomethylase, PFAM = PF01426;PF00385;PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00030400ctg000_1-16650' '(at4g19020 : 907.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 691.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 144.0) no description available & (reliability: 1814.0) & (original description: Putative CMT2, Description = Chromomethylase 2, PFAM = PF00145;PF01426;PF00385)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00030400ctg000_5282-16843' '(at4g19020 : 580.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 465.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|84558 : 81.5) no description available & (reliability: 1160.0) & (original description: Putative cmt3b, Description = Chromomethylase, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01145_346288-364260' '(at4g19020 : 902.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 693.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 143.0) no description available & (reliability: 1804.0) & (original description: Putative MET2A, Description = DNA (cytosine-5)-methyltransferase 1, PFAM = PF00145;PF01426;PF00385)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01396_821809-829771' '(at5g25480 : 474.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 278.0) no description available & (gnl|cdd|73191 : 159.0) no description available & (reliability: 948.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01396_821812-828317' '(at5g25480 : 379.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 219.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 758.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01671_255426-263989' '(at3g17310 : 434.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 164 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative DRM2, Description = Cytosine-5-methyltransferase, PFAM = )' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02072_115776-128921' '(q8lpu5|cmt3_maize : 809.0) DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (Chromomethylase 3) (DNA methyltransferase 105) - Zea mays (Maize) & (at1g69770 : 780.0) Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.; chromomethylase 3 (CMT3); FUNCTIONS IN: DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 2 (TAIR:AT4G19020.1); Has 4337 Blast hits to 3739 proteins in 974 species: Archae - 208; Bacteria - 2545; Metazoa - 230; Fungi - 161; Plants - 416; Viruses - 30; Other Eukaryotes - 747 (source: NCBI BLink). & (gnl|cdd|72856 : 182.0) no description available & (reliability: 1560.0) & (original description: Putative CMT3, Description = DNA (cytosine-5)-methyltransferase CMT3, PFAM = PF00385;PF01426;PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02361_522924-529444' '(at5g14620 : 587.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1174.0) & (original description: Putative DRM2, Description = DNA (cytosine-5)-methyltransferase DRM2, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02944_184474-190045' '(at5g25480 : 370.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 217.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 740.0) & (original description: Putative met4, Description = tRNA (Cytosine-5-)-methyltransferase, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf07140_55930-67591' '(at5g14620 : 567.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1134.0) & (original description: Putative DRM1, Description = DNA (cytosine-5)-methyltransferase DRM1, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf07518_61891-92864' '(at5g15380 : 541.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative DRM1, Description = DNA (cytosine-5)-methyltransferase DRM1, PFAM = PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf32212_74001-87697' '(at5g49160 : 1755.0) Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.; methyltransferase 1 (MET1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA (cytosine-5)-methyltransferase 1 (InterPro:IPR017198), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117); BEST Arabidopsis thaliana protein match is: DNA (cytosine-5-)-methyltransferase family protein (TAIR:AT4G08990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72848 : 273.0) no description available & (q9axt8|cmt1_maize : 203.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (reliability: 3510.0) & (original description: Putative met1, Description = Cytosine-specific methyltransferase, PFAM = PF12047;PF12047;PF01426;PF01426;PF00145)' T
'27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf39449_18372-27366' '(q9axt8|cmt1_maize : 791.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (at4g19020 : 756.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (gnl|cdd|72856 : 196.0) no description available & (reliability: 1512.0) & (original description: Putative cmt3, Description = Chromomethylase, PFAM = PF00385;PF00145;PF01426)' T
'27.3.47' 'RNA.regulation of transcription.ELF3' 'nbv0.3scaffold40860_8003-15193' '(at2g25930 : 201.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative ELF3, Description = Nematode-responsive protein, PFAM = )' T
'27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf04675_196599-204354' '(at2g25930 : 197.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ELF3, Description = Nematode-responsive protein, PFAM = )' T
'27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf05272_11840-18343' '(at2g25930 : 141.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative)' T
'27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf05923_377917-382938' '(at2g25930 : 138.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative glysoja_023390, Description = Protein FAR1-RELATED SEQUENCE 11, PFAM = )' T
'27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf09513_156019-163219' '(at2g25930 : 247.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative TCM_037249, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold4603_50538-59075' '(at3g07220 : 238.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold41301_1-7551' '(at3g07220 : 409.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative FHA1, Description = Transcriptional activator FHA1, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold65869_136-9132' '(at2g45460 : 520.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1040.0) & (original description: Putative FHA9, Description = BnaC04g04220D protein, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.5scaffold467_71201-81460' '(at2g45460 : 586.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1172.0) & (original description: Putative FHA9, Description = FHA transcription factor, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.5scaffold1635_382137-388230' '(at1g34355 : 259.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative PS1, Description = FHA domain-containing protein PS1, PFAM = PF13638;PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben044scf00002060ctg006_990-7091' '(at3g07260 : 232.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07220.1); Has 417 Blast hits to 417 proteins in 140 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 198; Plants - 82; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben044scf00002839ctg008_1-5525' '(at1g34355 : 253.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PS1, Description = FHA domain-containing protein PS1, PFAM = PF00498;PF13638)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf02423_219365-222413' '(at1g34355 : 105.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PS1, Description = Nuclear inhibitor of protein phosphatase 1, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf03479_409052-420898' '(at3g07220 : 241.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf04813_87273-103046' '(at2g45460 : 621.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1242.0) & (original description: Putative FHA9, Description = FHA transcription factor, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf06423_451078-455606' '(at5g47790 : 420.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37091 : 244.0) no description available & (gnl|cdd|28942 : 81.6) no description available & (reliability: 840.0) & (original description: Putative glysoja_015141, Description = Nuclear inhibitor of protein phosphatase 1, PFAM = PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf07623_76502-101179' '(at5g07400 : 855.0) forkhead-associated domain-containing protein / FHA domain-containing protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, seed; EXPRESSED DURING: F mature embryo stage; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253), HIP116, Rad5p N-terminal (InterPro:IPR014905); BEST Arabidopsis thaliana protein match is: tyrosyl-DNA phosphodiesterase-related (TAIR:AT5G15170.1); Has 394 Blast hits to 361 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 165; Fungi - 89; Plants - 76; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 1710.0) & (original description: Putative BnaC02g01640D, Description = BnaC02g01640D protein, PFAM = PF06087;PF06087;PF08797;PF00498)' T
'27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf08899_23589-31666' '(at3g07220 : 397.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'nbv0.5scaffold2396_44671-48564' '(at5g28040 : 223.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 446.0) & (original description: Putative cal, Description = Calmodulin, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'nbv0.5scaffold4581_147950-158546' '(at5g28040 : 220.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 440.0) & (original description: Putative PGSC0003DMG400022471, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00000733ctg002_4539-7837' '(at5g28040 : 216.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 432.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00006392ctg001_2575-5321' '(at5g14280 : 306.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = )' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00009456ctg022_1-2505' '(gnl|cdd|68089 : 120.0) no description available & (at1g61730 : 86.3) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00390.1); Has 9484 Blast hits to 2301 proteins in 293 species: Archae - 12; Bacteria - 1789; Metazoa - 891; Fungi - 666; Plants - 367; Viruses - 44; Other Eukaryotes - 5715 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative TCM_032355, Description = DNA-binding storekeeper protein-related transcriptional regulator, putative, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00025579ctg015_1-4057' '(at5g28040 : 174.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 139.0) no description available & (reliability: 348.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf00611_661885-666194' '(at5g28040 : 206.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 138.0) no description available & (reliability: 412.0) & (original description: Putative BnaC07g27630D, Description = BnaC07g27630D protein, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf01761_195328-198218' '(at5g14280 : 302.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = )' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf06876_184369-187662' '(at5g28040 : 215.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 132.0) no description available & (reliability: 430.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T
'27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf18951_101753-104258' '(at5g14280 : 244.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = PF03798)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold1160_30523-42059' '(at3g55770 : 179.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 358.0) & (original description: Putative PLIM2C, Description = LIM domain-containing protein PLIM2c, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold2245_68761-73901' '(at3g13960 : 166.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 332.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold11413_11833-14766' '(at3g55770 : 164.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 109.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 100.0) no description available & (reliability: 328.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold12610_10135-24475' '(at3g52270 : 258.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 202.0) no description available & (gnl|cdd|66000 : 95.1) no description available & (reliability: 516.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold16817_5180-9924' '(gnl|cdd|38117 : 96.6) no description available & (at4g07950 : 88.6) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold35694_9441-17980' '(at1g07470 : 286.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 181.0) no description available & (gnl|cdd|66805 : 174.0) no description available & (reliability: 572.0) & (original description: Putative TF1, Description = TF1, PFAM = PF03153;PF03153)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold37801_9777-13483' '(at4g37740 : 90.9) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold48421_4287-9423' '(at1g01160 : 86.7) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold49478_3158-9204' '(at1g75510 : 165.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 322.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold66204_1642-9175' '(at3g13960 : 150.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 84.6) no description available & (reliability: 300.0) & (original description: Putative GRF3, Description = Growth-regulating factor 3, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold524_287276-292648' '(at4g10920 : 137.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 83.1) no description available & (gnl|cdd|85919 : 80.8) no description available & (reliability: 274.0) & (original description: Putative KELP, Description = KELP, PFAM = PF08766;PF02229)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold740_546661-556434' '(at3g13960 : 114.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 80.8) no description available & (reliability: 228.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold865_472579-478691' '(at1g07470 : 187.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 108.0) no description available & (gnl|cdd|66805 : 103.0) no description available & (reliability: 374.0) & (original description: Putative BnaA10g04880D, Description = BnaA10g04880D protein, PFAM = PF03153)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold2333_169734-196373' '(at5g41580 : 166.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative , Description = Sumo ligase, putative, PFAM = )' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold3677_213965-226761' '(at4g37740 : 90.1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold3743_162539-176542' '(at4g39160 : 153.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884). & (reliability: 306.0) & (original description: Putative PGSC0003DMG402017733, Description = BnaA06g40770D protein, PFAM = PF15963)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold7694_13941-24505' '(at1g01780 : 135.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (p29675|sf3_helan : 105.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 90.9) no description available & (reliability: 266.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold7787_39470-44777' '(at2g45480 : 122.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative GRF3, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold8202_23412-27704' '(at1g01160 : 85.9) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00000193ctg007_17113-22840' '(at3g55770 : 180.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 137.0) no description available & (reliability: 360.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00002770ctg022_1516-6243' '(at2g45480 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative GRF1, Description = Growth-regulating factor, PFAM = PF08880;PF08879;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00007991ctg008_16177-18391' '(at5g23710 : 150.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38443 : 142.0) no description available & (gnl|cdd|68720 : 97.7) no description available & (reliability: 300.0) & (original description: Putative At5g23710, Description = At5g23710, PFAM = PF05158)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00010450ctg003_14923-19348' '(at4g24150 : 128.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 8 (GRF8); FUNCTIONS IN: transcription activator activity; INVOLVED IN: leaf development; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 7 (TAIR:AT5G53660.1); Has 485 Blast hits to 474 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72299 : 81.1) no description available & (reliability: 232.0) & (original description: Putative GRF1, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00019506ctg005_4251-8988' '(at5g53660 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 7 (GRF7); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 8 (TAIR:AT4G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 230.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00022391ctg002_223-4484' '(at5g09380 : 159.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 139.0) no description available & (gnl|cdd|68697 : 93.9) no description available & (reliability: 318.0) & (original description: Putative Os01g0889200, Description = Os01g0889200 protein, PFAM = PF05132)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00026189ctg005_37275-42280' '(at3g55770 : 277.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 169.0) no description available & (reliability: 554.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00027413ctg003_1-2965' '(at5g09380 : 168.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 149.0) no description available & (gnl|cdd|68697 : 108.0) no description available & (reliability: 336.0) & (original description: Putative KK1_047346, Description = DNA-directed RNA polymerase III subunit RPC4, PFAM = PF05132)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00030819ctg000_1-3141' '(at3g13960 : 158.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative GRF1, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00047859ctg000_9129-12569' '(at1g73230 : 167.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 334.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00054622ctg002_852-6775' '(at3g13960 : 156.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 85.0) no description available & (reliability: 312.0) & (original description: Putative GRF3, Description = Growth-regulating factor 3, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00058323ctg003_3806-8810' '(at3g13940 : 286.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor, A49-like (InterPro:IPR009668); Has 222 Blast hits to 222 proteins in 107 species: Archae - 0; Bacteria - 2; Metazoa - 66; Fungi - 105; Plants - 33; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39385 : 172.0) no description available & (gnl|cdd|70343 : 166.0) no description available & (reliability: 572.0) & (original description: Putative At3g13940, Description = DNA binding / DNA-directed RNA polymerase, PFAM = PF06870)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00132_116689-129112' '(at4g10920 : 150.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 100.0) no description available & (gnl|cdd|85919 : 98.1) no description available & (reliability: 300.0) & (original description: Putative KELP, Description = RNA polymerase II transcriptional coactivator KELP, PFAM = PF02229;PF08766)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00239_900072-902308' '(at5g23710 : 92.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative PGSC0003DMG400003846, Description = DNA-directed RNA polymerase III subunit RPC6, PFAM = PF05158)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00592_1158967-1163955' '(at5g09250 : 100.0) putative transcriptional co-activator (KIWI) mRNA, complete; KIWI; FUNCTIONS IN: protein binding, transcription coactivator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT5G09240.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85919 : 86.9) no description available & (gnl|cdd|37923 : 85.4) no description available & (reliability: 200.0) & (original description: Putative KIWI, Description = RNA polymerase II transcriptional coactivator KIWI, PFAM = PF02229)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00647_126529-130479' '(at2g39900 : 137.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 107.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 92.8) no description available & (reliability: 268.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01027_146715-161329' '(at5g41580 : 382.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|37380 : 124.0) no description available & (gnl|cdd|66556 : 87.2) no description available & (reliability: 764.0) & (original description: Putative PIAL1, Description = BnaA09g48660D protein, PFAM = PF02891)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01111_589445-595172' '(at3g55770 : 178.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 137.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 356.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01145_294660-311319' '(at3g13960 : 151.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 84.2) no description available & (reliability: 302.0) & (original description: Putative GRF5, Description = Growth-regulating factor 5, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01437_321008-328222' '(at3g13960 : 154.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 81.9) no description available & (reliability: 308.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01482_259811-268600' '(at1g07470 : 287.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 182.0) no description available & (gnl|cdd|66805 : 176.0) no description available & (reliability: 574.0) & (original description: Putative TF1, Description = TF1, PFAM = PF03153;PF03153)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01798_821345-824487' '(at1g73230 : 171.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 152.0) no description available & (reliability: 340.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01824_150461-156201' '(at2g39900 : 218.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 166.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 150.0) no description available & (reliability: 418.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01830_99899-105548' '(at4g37740 : 92.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|72299 : 80.4) no description available & (reliability: 184.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01863_719457-725253' '(at2g22840 : 308.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 714 Blast hits to 669 proteins in 68 species: Archae - 0; Bacteria - 24; Metazoa - 65; Fungi - 20; Plants - 548; Viruses - 4; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|72299 : 88.1) no description available & (reliability: 616.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf02459_120197-141704' '(at1g17680 : 665.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37287 : 487.0) no description available & (reliability: 1330.0) & (original description: Putative glysoja_020404, Description = General transcription factor 3C polypeptide 3, PFAM = PF13174;PF14559;PF13414)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf02606_629841-635257' '(at4g07950 : 105.0) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|38117 : 97.7) no description available & (reliability: 210.0) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf03419_1064121-1069353' '(at2g22840 : 254.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 714 Blast hits to 669 proteins in 68 species: Archae - 0; Bacteria - 24; Metazoa - 65; Fungi - 20; Plants - 548; Viruses - 4; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|72299 : 86.2) no description available & (reliability: 508.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf03708_359407-362523' '(at1g17880 : 190.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 380.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04018_474650-479514' '(at3g13960 : 163.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 326.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04018_564923-569674' '(at5g09380 : 190.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 140.0) no description available & (gnl|cdd|68697 : 99.3) no description available & (reliability: 380.0) & (original description: Putative LOC100283887, Description = DNA binding protein, PFAM = PF05132)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04093_27300-41196' '(at3g55770 : 272.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 177.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 167.0) no description available & (reliability: 544.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04398_611510-615086' '(at3g13960 : 162.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.1) no description available & (reliability: 324.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04795_195185-218719' '(at3g52270 : 255.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 203.0) no description available & (gnl|cdd|66000 : 93.2) no description available & (reliability: 510.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04847_417949-440512' '(at1g55750 : 627.0) BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); CONTAINS InterPro DOMAIN/s: Kelch related (InterPro:IPR013089), BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (TAIR:AT3G61420.1); Has 363 Blast hits to 357 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 134; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37285 : 289.0) no description available & (reliability: 1174.0) & (original description: Putative BSD10, Description = Putative RNA polymerase II transcription factor B subunit 1-1, PFAM = PF08567;PF03909)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf05017_447680-452493' '(at3g55770 : 275.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 171.0) no description available & (reliability: 550.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf05378_4447-22761' '(at4g39160 : 145.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884). & (reliability: 290.0) & (original description: Putative PGSC0003DMG402017733, Description = Transcription factor TFIIIB component B, PFAM = PF15963)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06042_319909-323241' '(at5g09380 : 167.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 150.0) no description available & (gnl|cdd|68697 : 109.0) no description available & (reliability: 334.0) & (original description: Putative KK1_047346, Description = DNA-directed RNA polymerase III subunit RPC4, PFAM = PF05132)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06504_97458-102830' '(at4g10920 : 156.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 82.3) no description available & (gnl|cdd|85919 : 82.3) no description available & (reliability: 312.0) & (original description: Putative KELP, Description = RNA polymerase II transcriptional coactivator KELP, PFAM = PF02229;PF08766)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06890_94273-99978' '(at3g25940 : 109.0) TFIIB zinc-binding protein; FUNCTIONS IN: transcription regulator activity, DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20065.1); Has 975 Blast hits to 975 proteins in 277 species: Archae - 178; Bacteria - 0; Metazoa - 339; Fungi - 204; Plants - 110; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400022038, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06990_24932-27201' '(at5g23710 : 194.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38443 : 180.0) no description available & (gnl|cdd|68720 : 137.0) no description available & (reliability: 388.0) & (original description: Putative BnaC07g30610D, Description = BnaC07g30610D protein, PFAM = PF05158;PF05158)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf07314_381541-387141' '(at4g35540 : 350.0) zinc ion binding;transcription regulators; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription, transcription initiation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Zinc finger, TFIIB-type (InterPro:IPR013137); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36811 : 205.0) no description available & (gnl|cdd|31595 : 83.0) no description available & (reliability: 700.0) & (original description: Putative PTF2, Description = Plant-specific TFIIB-related protein PTF2, PFAM = PF08271)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08206_93739-98133' '(at5g53660 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 7 (GRF7); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 8 (TAIR:AT4G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 230.0) & (original description: Putative GRL7, Description = GRL7, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08206_212655-217791' '(at1g01160 : 87.8) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative AN3, Description = GRF1-interacting factor 2, PFAM = PF05030)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08419_108033-122556' '(at4g17020 : 714.0) transcription factor-related; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb2 (InterPro:IPR004598). & (gnl|cdd|38681 : 360.0) no description available & (gnl|cdd|67462 : 261.0) no description available & (reliability: 1428.0) & (original description: Putative TFB2, Description = RNA polymerase II transcription factor B subunit 2, PFAM = PF03849)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08533_209137-217430' '(at3g52270 : 164.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 328.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08535_214966-219693' '(at3g13960 : 164.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 328.0) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08751_108320-117376' '(at1g07470 : 187.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 106.0) no description available & (gnl|cdd|66805 : 101.0) no description available & (reliability: 374.0) & (original description: Putative BnaA10g04880D, Description = BnaA10g04880D protein, PFAM = PF03153)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf09130_63600-70422' '(at3g13960 : 114.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 80.8) no description available & (reliability: 228.0) & (original description: Putative GRF4, Description = GRF domain class transcription factor, PFAM = PF08880;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf09512_123788-151644' '(at5g41580 : 194.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative glysoja_004814, Description = E3 SUMO-protein ligase pli1, PFAM = )' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf10776_19959-28365' '(at5g09380 : 161.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 129.0) no description available & (gnl|cdd|68697 : 94.3) no description available & (reliability: 322.0) & (original description: Putative Os01g0889200, Description = Os01g0889200 protein, PFAM = PF05132)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf11491_127817-132465' '(at1g17680 : 466.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37287 : 373.0) no description available & (reliability: 932.0) & (original description: Putative glysoja_020404, Description = General transcription factor 3C polypeptide 3, PFAM = PF13181;PF13176)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf13206_41820-47609' '(at2g45480 : 124.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative GRF2, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879;PF08879)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf17513_10986-14670' '(at4g37740 : 99.8) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf25430_107790-113108' '(at3g13940 : 285.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor, A49-like (InterPro:IPR009668); Has 222 Blast hits to 222 proteins in 107 species: Archae - 0; Bacteria - 2; Metazoa - 66; Fungi - 105; Plants - 33; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39385 : 172.0) no description available & (gnl|cdd|70343 : 167.0) no description available & (reliability: 570.0) & (original description: Putative At3g13940, Description = DNA binding / DNA-directed RNA polymerase, PFAM = PF06870)' T
'27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf33214_34015-37430' '(at1g17880 : 171.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 157.0) no description available & (reliability: 342.0) & (original description: Putative btf3, Description = Nascent polypeptide-associated complex subunit beta, PFAM = PF01849)' T
'27.3.50.1' 'RNA.regulation of transcription.General Transcription.Coactivator p15' '' ''
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'nbv0.3scaffold18790_4670-16632' '(at5g25150 : 605.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 407.0) no description available & (gnl|cdd|29257 : 205.0) no description available & (p93107|pf20_chlre : 97.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1210.0) & (original description: Putative taf5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'nbv0.5scaffold7681_1877-18739' '(at5g25150 : 891.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 494.0) no description available & (gnl|cdd|29257 : 224.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1782.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF04494;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00015930ctg002_17113-24922' '(at5g25150 : 595.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 397.0) no description available & (gnl|cdd|29257 : 204.0) no description available & (p93107|pf20_chlre : 88.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1190.0) & (original description: Putative taf5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00018940ctg018_645-5884' '(at5g45600 : 296.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 162.0) no description available & (gnl|cdd|67005 : 115.0) no description available & (reliability: 592.0) & (original description: Putative TAF14, Description = Transcription initiation factor TFIID subunit 14, PFAM = PF03366)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00020790ctg007_3498-8740' '(at5g45600 : 303.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 163.0) no description available & (gnl|cdd|67005 : 118.0) no description available & (reliability: 606.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf00130_160129-182504' '(at5g25150 : 938.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 497.0) no description available & (gnl|cdd|29257 : 227.0) no description available & (p93107|pf20_chlre : 102.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1876.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF04494)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf00130_160539-182354' '(at5g25150 : 944.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 519.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1888.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF04494;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf03735_376969-382044' '(at5g45600 : 295.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 164.0) no description available & (gnl|cdd|67005 : 116.0) no description available & (reliability: 590.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf09010_452656-457668' '(at5g45600 : 305.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 168.0) no description available & (gnl|cdd|67005 : 119.0) no description available & (reliability: 610.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T
'27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf14778_31038-35121' '(at3g56510 : 248.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: TATA-binding protein binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38362 : 174.0) no description available & (reliability: 496.0) & (original description: Putative v1g124028, Description = Predicted protein, PFAM = PF00076)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold18987_895-7662' '(at3g27260 : 413.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 109.0) no description available & (reliability: 826.0) & (original description: Putative GTE9, Description = Transcription factor GTE9, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold23736_6204-10182' '(at5g65630 : 265.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 205.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 530.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold49868_3025-11351' '(at2g34900 : 295.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 159.0) no description available & (gnl|cdd|47625 : 92.3) no description available & (reliability: 590.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold58730_1-12284' '(at4g08350 : 1100.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 800.0) no description available & (gnl|cdd|34765 : 147.0) no description available & (reliability: 2200.0) & (original description: Putative At2g34210, Description = Putative transcription elongation factor SPT5 homolog 2, PFAM = PF11942;PF00467;PF00467;PF03439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold489_663713-667743' '(at1g06230 : 345.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 197.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 690.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold2562_264214-267939' '(gnl|cdd|37210 : 290.0) no description available & (at4g08350 : 276.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative GTA1501, Description = Transcription elongation factor SPT5, PFAM = PF03439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold2619_189382-194591' '(q7x923|spt16_orysa : 1372.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 1360.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1013.0) no description available & (gnl|cdd|34965 : 650.0) no description available & (reliability: 2720.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF14826;PF00557;PF08512;PF08644)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00002359ctg010_1-2810' '(at5g63320 : 355.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 213.0) no description available & (gnl|cdd|47625 : 109.0) no description available & (reliability: 650.0) & (original description: Putative BET9, Description = Bromodomain-containing protein, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00006966ctg014_340-4765' '(at3g52280 : 239.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 155.0) no description available & (gnl|cdd|47625 : 94.6) no description available & (reliability: 478.0) & (original description: Putative BRD2, Description = Global transcription factor group isoform 1, PFAM = PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00008985ctg019_11873-16335' '(at3g27260 : 286.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 220.0) no description available & (gnl|cdd|47625 : 112.0) no description available & (reliability: 572.0) & (original description: Putative BET9, Description = Bromodomain-containing protein, putative, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00014576ctg000_2708-10456' '(at2g34900 : 281.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 143.0) no description available & (gnl|cdd|47625 : 85.3) no description available & (reliability: 562.0) & (original description: Putative GTE1, Description = Global transcription factor group isoform 1, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00014897ctg006_3669-13606' '(at1g65440 : 1786.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (gnl|cdd|37067 : 980.0) no description available & (gnl|cdd|32366 : 181.0) no description available & (reliability: 3572.0) & (original description: Putative GTB1, Description = Transcription elongation factor SPT6-like protein, PFAM = PF14641;PF14639;PF14878;PF14632;PF14635;PF14633)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00025913ctg011_2037-6105' '(at5g65630 : 284.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 568.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00351_574649-578635' '(at5g65630 : 281.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 201.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 562.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00367_494987-503711' '(at2g34900 : 282.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 150.0) no description available & (gnl|cdd|47625 : 89.6) no description available & (reliability: 564.0) & (original description: Putative BRD2, Description = Global transcription factor group isoform 1, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00398_295913-300471' '(at1g06230 : 329.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 216.0) no description available & (gnl|cdd|47625 : 112.0) no description available & (reliability: 658.0) & (original description: Putative FSH, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00457_741114-743866' '(gnl|cdd|36687 : 119.0) no description available & (at1g06230 : 108.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|47625 : 90.7) no description available & (reliability: 216.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00714_782733-792005' '(at3g52280 : 322.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 162.0) no description available & (gnl|cdd|47625 : 96.5) no description available & (reliability: 644.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf01964_57235-62420' '(q8h6b1|spt16_maize : 1376.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (Global transcription factor group C protein 102) - Zea mays (Maize) & (at4g10710 : 1354.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1007.0) no description available & (gnl|cdd|34965 : 642.0) no description available & (reliability: 2708.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF00557;PF08644;PF08512;PF14826)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf01964_61893-67102' '(q7x923|spt16_orysa : 1368.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 1357.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1013.0) no description available & (gnl|cdd|34965 : 647.0) no description available & (reliability: 2714.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF08644;PF08512;PF00557;PF14826)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf02392_31053-35120' '(at5g65630 : 290.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 200.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 580.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf02525_739908-747803' '(at2g34900 : 292.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 158.0) no description available & (gnl|cdd|47625 : 90.7) no description available & (reliability: 584.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03085_88801-92871' '(at1g06230 : 344.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 192.0) no description available & (gnl|cdd|47625 : 104.0) no description available & (reliability: 688.0) & (original description: Putative BRD3, Description = Transcription factor GTE4, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03213_430598-438550' '(at5g63320 : 415.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 754.0) & (original description: Putative BnaC03g51040D, Description = BnaC03g51040D protein, PFAM = PF00439;PF17035)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03370_11007-22838' '(at1g65440 : 1784.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (gnl|cdd|37067 : 1001.0) no description available & (gnl|cdd|32366 : 186.0) no description available & (reliability: 3568.0) & (original description: Putative GTB1, Description = Transcription elongation factor SPT6-like protein, PFAM = PF14641;PF14633;PF14878;PF14635;PF14639)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03600_381693-388460' '(at3g27260 : 377.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 235.0) no description available & (gnl|cdd|47625 : 110.0) no description available & (reliability: 754.0) & (original description: Putative GTE11, Description = Transcription factor GTE11, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf05340_165021-168130' '(at4g10710 : 95.9) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8h6b1|spt16_maize : 91.7) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (Global transcription factor group C protein 102) - Zea mays (Maize) & (reliability: 191.8) & (original description: Putative , Description = , PFAM = PF14826)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf05750_158098-166164' '(at5g63320 : 412.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 206.0) no description available & (gnl|cdd|47625 : 107.0) no description available & (reliability: 744.0) & (original description: Putative GTE9, Description = Transcription factor GTE9, PFAM = PF17035;PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf10713_132647-137823' '(q7x923|spt16_orysa : 623.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 605.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 372.0) no description available & (gnl|cdd|29976 : 285.0) no description available & (reliability: 1210.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF08512;PF14826;PF00557)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf12205_484172-490584' '(gnl|cdd|36687 : 145.0) no description available & (at5g46550 : 129.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1); Has 6307 Blast hits to 5240 proteins in 258 species: Archae - 2; Bacteria - 6; Metazoa - 3814; Fungi - 1080; Plants - 634; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). & (gnl|cdd|47625 : 101.0) no description available & (reliability: 258.0) & (original description: Putative NPX1, Description = Bromodomain-containing protein, putative, PFAM = PF00439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf15995_86330-102690' '(at4g08350 : 920.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 586.0) no description available & (gnl|cdd|34765 : 144.0) no description available & (reliability: 1840.0) & (original description: Putative GTA1501, Description = Transcription elongation factor SPT5, PFAM = PF11942;PF00467)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf26075_41889-57125' '(at4g08350 : 1250.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 864.0) no description available & (gnl|cdd|34765 : 147.0) no description available & (reliability: 2500.0) & (original description: Putative At4g08350, Description = Putative transcription elongation factor SPT5 homolog 1, PFAM = PF00467;PF00467;PF11942;PF03439)' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf26075_47270-49760' '(at4g08350 : 180.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 129.0) no description available & (reliability: 360.0) & (original description: Putative GTA1502, Description = Transcription elongation factor SPT5, PFAM = )' T
'27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf35617_35213-48141' '(at3g52280 : 335.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 170.0) no description available & (gnl|cdd|47625 : 96.1) no description available & (reliability: 670.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T
'27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'nbv0.3scaffold62970_574-11089' '(at2g34450 : 103.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative HMGB14, Description = High mobility group B protein 14, PFAM = PF00505)' T
'27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf02107_287634-301528' '(at2g34450 : 103.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative NFD14, Description = HMG-box DNA-binding family protein isoform 1, PFAM = PF00505)' T
'27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf02638_153781-164918' '(at2g34450 : 106.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative HMGB14, Description = High mobility group B protein 14, PFAM = PF00505)' T
'27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf03985_358027-363510' '(at4g23800 : 226.0) HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1). & (reliability: 442.0) & (original description: Putative HMGB6, Description = High mobility group B protein 6, PFAM = PF00505;PF00505;PF00505)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold1191_66475-71706' '(at1g03650 : 226.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). & (gnl|cdd|38349 : 117.0) no description available & (reliability: 452.0) & (original description: Putative At1g03650, Description = Acyl-CoA N-acyltransferases-like protein, PFAM = PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold25095_586-28866' '(at3g54610 : 352.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 153.0) no description available & (reliability: 704.0) & (original description: Putative gcn5, Description = Histone acetyltransferase GCN5, PFAM = PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold41310_97-26473' '(at1g32750 : 1483.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 801.0) no description available & (gnl|cdd|34778 : 191.0) no description available & (reliability: 2966.0) & (original description: Putative TAF1, Description = Transcription initiation factor TFIID subunit 1, PFAM = PF09247;PF00240;PF00439;PF12157)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold53487_5430-12280' '(at4g16420 : 167.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 153.0) no description available & (gnl|cdd|34717 : 116.0) no description available & (reliability: 334.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2, PFAM = PF00249;PF00569)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold77727_1170-7616' '(at5g56740 : 488.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (q6es10|hat1_orysa : 401.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (gnl|cdd|37907 : 237.0) no description available & (reliability: 976.0) & (original description: Putative HAG2, Description = Histone acetyltransferase type B catalytic subunit, PFAM = PF10394;PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold180_191395-246436' '(at3g54610 : 465.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 186.0) no description available & (gnl|cdd|34680 : 85.2) no description available & (reliability: 930.0) & (original description: Putative gcn5, Description = Histone acetyltransferase GCN5, PFAM = PF00439;PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold536_672179-684528' '(at1g79000 : 775.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 291.0) no description available & (gnl|cdd|36989 : 134.0) no description available & (reliability: 1550.0) & (original description: Putative BnaAnng24420D, Description = BnaAnng24420D protein, PFAM = PF08214;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1683_410169-423865' '(at4g16420 : 307.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 274.0) no description available & (gnl|cdd|34717 : 159.0) no description available & (reliability: 614.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00249;PF00569)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1877_143768-153446' '(at1g79000 : 436.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|36989 : 206.0) no description available & (reliability: 872.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC12, PFAM = PF00569;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1877_148373-154711' '(at1g79000 : 561.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 274.0) no description available & (reliability: 1122.0) & (original description: Putative nej, Description = CREB-binding protein, PFAM = PF08214)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold2568_97027-117828' '(at4g37280 : 359.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 208.0) no description available & (gnl|cdd|38211 : 128.0) no description available & (reliability: 718.0) & (original description: Putative MRG1, Description = Protein MRG1, PFAM = PF05712)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00002622ctg002_1070-5354' '(at4g16420 : 270.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 216.0) no description available & (gnl|cdd|34717 : 115.0) no description available & (reliability: 540.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00007662ctg015_1-16572' '(at1g16710 : 1431.0) Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.; histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1). & (gnl|cdd|87003 : 294.0) no description available & (gnl|cdd|36989 : 173.0) no description available & (reliability: 2862.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC1, PFAM = PF00628;PF00569;PF08214;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00008173ctg013_1-2821' '(at4g16420 : 219.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 165.0) no description available & (reliability: 438.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00008173ctg015_1-1341' '(at3g07740 : 98.6) encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1; homolog of yeast ADA2 2A (ADA2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2B (TAIR:AT4G16420.2). & (reliability: 197.2) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00013870ctg001_1-6322' '(at4g16420 : 239.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 199.0) no description available & (gnl|cdd|34717 : 149.0) no description available & (reliability: 478.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2, PFAM = PF00249;PF00569)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00019884ctg002_1-11164' '(at1g02740 : 244.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), Tudor-like, plant (InterPro:IPR014002), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT4G37280.1); Has 1083 Blast hits to 947 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 790; Fungi - 163; Plants - 70; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|69247 : 182.0) no description available & (gnl|cdd|38211 : 125.0) no description available & (reliability: 488.0) & (original description: Putative MRG1, Description = Chromatin-binding protein, PFAM = PF05712)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00022229ctg002_290-8598' '(at1g32750 : 664.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 454.0) no description available & (gnl|cdd|34778 : 201.0) no description available & (reliability: 1328.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF00240;PF12157)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00023848ctg001_1-5191' '(at1g32750 : 454.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 266.0) no description available & (gnl|cdd|47625 : 80.3) no description available & (reliability: 908.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF00439;PF15288)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00025643ctg002_23556-32737' '(at1g79000 : 657.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|47852 : 109.0) no description available & (reliability: 1314.0) & (original description: Putative CAP, Description = Histone acetyltransferase HAC1, PFAM = PF00628;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00041592ctg000_1885-8550' '(at4g16420 : 225.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 199.0) no description available & (gnl|cdd|34717 : 140.0) no description available & (reliability: 450.0) & (original description: Putative BnaC01g21680D, Description = BnaC01g21680D protein, PFAM = PF00249;PF00569)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf00377_24801-45675' '(at1g16710 : 1660.0) Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.; histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1). & (gnl|cdd|87003 : 299.0) no description available & (gnl|cdd|36989 : 290.0) no description available & (reliability: 3320.0) & (original description: Putative HAC12, Description = Histone acetyltransferase HAC12, PFAM = PF00569;PF08214;PF00628;PF02135;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01169_459305-484713' '(at4g37280 : 350.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 207.0) no description available & (gnl|cdd|38211 : 129.0) no description available & (reliability: 700.0) & (original description: Putative MRG1, Description = Protein MRG1, PFAM = PF05712)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01555_122265-136620' '(at1g02740 : 249.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), Tudor-like, plant (InterPro:IPR014002), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT4G37280.1); Has 1083 Blast hits to 947 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 790; Fungi - 163; Plants - 70; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|69247 : 155.0) no description available & (gnl|cdd|38211 : 107.0) no description available & (reliability: 498.0) & (original description: Putative MRG2, Description = Protein MRG2, PFAM = PF11717;PF05712)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01740_1133908-1204554' '(at3g54610 : 647.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 276.0) no description available & (gnl|cdd|47625 : 123.0) no description available & (reliability: 1294.0) & (original description: Putative HAG1, Description = Histone acetyltransferase GCN5, PFAM = PF00439;PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf02413_369397-387700' '(at1g32750 : 377.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 114.0) no description available & (reliability: 754.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF12157;PF09247)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf02445_32965-51741' '(at4g37280 : 268.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 179.0) no description available & (gnl|cdd|38211 : 117.0) no description available & (reliability: 536.0) & (original description: Putative MRG1, Description = Chromatin-binding protein, PFAM = PF05712;PF11717)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf03129_154348-170112' '(at4g16420 : 488.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 229.0) no description available & (gnl|cdd|34717 : 140.0) no description available & (reliability: 976.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00569;PF00249)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf05373_194822-203498' '(at5g13680 : 1370.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.; ABA-OVERLY SENSITIVE 1 (ABO1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), IKI3 (InterPro:IPR006849); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37131 : 851.0) no description available & (gnl|cdd|68339 : 690.0) no description available & (reliability: 2740.0) & (original description: Putative ELP1, Description = Elongator complex protein 1, PFAM = PF04762)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf06395_80772-86003' '(at1g03650 : 232.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). & (gnl|cdd|38349 : 122.0) no description available & (reliability: 464.0) & (original description: Putative At1g03650, Description = Acyl-CoA N-acyltransferases-like protein, PFAM = PF00583)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf08519_86553-93040' '(at1g79000 : 560.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 269.0) no description available & (reliability: 1120.0) & (original description: Putative nej, Description = CREB-binding protein, PFAM = PF08214)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf09100_226805-242926' '(at4g16420 : 305.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 221.0) no description available & (gnl|cdd|34717 : 148.0) no description available & (reliability: 610.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00249;PF00569)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf09485_11464-30028' '(at1g79000 : 1625.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 302.0) no description available & (gnl|cdd|36989 : 287.0) no description available & (reliability: 3250.0) & (original description: Putative HAC12, Description = Histone acetyltransferase HAC12, PFAM = PF00628;PF08214;PF00569;PF02135;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf11232_62482-74831' '(at1g79000 : 773.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 291.0) no description available & (gnl|cdd|36989 : 133.0) no description available & (reliability: 1546.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC1, PFAM = PF08214;PF02135)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf21557_99440-105527' '(at5g50320 : 1035.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; ELONGATA 3 (ELO3); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Histone acetyltransferase ELP3 (InterPro:IPR005910), Radical SAM (InterPro:IPR007197), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7x7l3|elp3_orysa : 1014.0) Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) & (gnl|cdd|37746 : 1012.0) no description available & (gnl|cdd|31436 : 662.0) no description available & (reliability: 2070.0) & (original description: Putative HAG3, Description = Elongator complex protein 3, PFAM = PF00583;PF04055;PF16199)' T
'27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf25141_8400-25951' '(at5g64610 : 754.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8li34|myst1_orysa : 713.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (gnl|cdd|37958 : 430.0) no description available & (gnl|cdd|34632 : 355.0) no description available & (reliability: 1508.0) & (original description: Putative HAM1, Description = Histone acetyltransferase of the MYST family 1, PFAM = PF01853;PF11717)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold5468_17464-31923' '(at4g33470 : 581.0) Encodes HDA14, a member of the histone deacetylase family proteins.; histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30472 : 260.0) no description available & (gnl|cdd|36557 : 251.0) no description available & (p56521|hdac_maize : 82.4) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1162.0) & (original description: Putative HDA14, Description = Histone deacetylase 14, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold14154_1717-10473' '(at5g26040 : 541.0) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36558 : 481.0) no description available & (gnl|cdd|30472 : 166.0) no description available & (reliability: 1082.0) & (original description: Putative HDA2, Description = Histone deacetylase 2, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold25163_19698-28782' '(at5g55760 : 418.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 209.0) no description available & (gnl|cdd|29378 : 184.0) no description available & (reliability: 836.0) & (original description: Putative sirt6, Description = NAD-dependent deacetylase sirtuin-6, PFAM = PF02146)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold29615_3353-9030' '(at3g44750 : 122.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 92.0) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative HDT3, Description = Histone deacetylase HDT3, PFAM = PF13912)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold46_645173-659636' '(at4g33470 : 582.0) Encodes HDA14, a member of the histone deacetylase family proteins.; histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30472 : 259.0) no description available & (gnl|cdd|36557 : 246.0) no description available & (p56521|hdac_maize : 82.4) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1164.0) & (original description: Putative HDA14, Description = Histone deacetylase 14, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold868_470688-478672' '(at4g38130 : 816.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 721.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|36556 : 692.0) no description available & (gnl|cdd|85068 : 442.0) no description available & (reliability: 1632.0) & (original description: Putative HDA19, Description = Histone deacetylase 19, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold3129_67179-80452' '(at5g63110 : 714.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 661.0) no description available & (p56521|hdac_maize : 558.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 398.0) no description available & (reliability: 1428.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold4555_149230-164573' '(at5g55760 : 546.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 305.0) no description available & (gnl|cdd|29378 : 244.0) no description available & (reliability: 1092.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146;PF02146)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00011069ctg008_349-5153' '(at3g44750 : 108.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 84.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 216.0) & (original description: Putative HD2, Description = Histone deacetylase 2a, PFAM = )' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00016998ctg011_16616-22293' '(at3g44750 : 123.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 94.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 246.0) & (original description: Putative HD2c, Description = Type 2 histone deacetylase c, PFAM = PF13912)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00044656ctg003_1-8743' '(gnl|cdd|35494 : 219.0) no description available & (at5g67320 : 163.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein ebi, PFAM = PF08513;PF00400;PF00400)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00045887ctg002_3220-13314' '(at5g61060 : 108.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (reliability: 216.0) & (original description: Putative HDA5, Description = Histone deacetylase 5, PFAM = )' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00058646ctg003_10741-15853' '(at5g55760 : 177.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative SRT1, Description = NAD-dependent deacetylase sirtuin-6, PFAM = )' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00059821ctg000_1-12324' '(at3g18520 : 636.0) Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation.; histone deacetylase 15 (HDA15); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: DNA mediated transformation, histone deacetylation; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9308 Blast hits to 9105 proteins in 1476 species: Archae - 223; Bacteria - 3234; Metazoa - 1500; Fungi - 655; Plants - 551; Viruses - 0; Other Eukaryotes - 3145 (source: NCBI BLink). & (gnl|cdd|30472 : 286.0) no description available & (gnl|cdd|36557 : 282.0) no description available & (p56521|hdac_maize : 84.7) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1272.0) & (original description: Putative HDA15, Description = Histone deacetylase 15, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf00546_821290-835669' '(at1g08460 : 551.0) histone deacetylase 8 (HDA08); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9025 Blast hits to 8820 proteins in 1442 species: Archae - 223; Bacteria - 3178; Metazoa - 1474; Fungi - 641; Plants - 477; Viruses - 0; Other Eukaryotes - 3032 (source: NCBI BLink). & (gnl|cdd|30472 : 255.0) no description available & (gnl|cdd|36557 : 239.0) no description available & (p56521|hdac_maize : 97.8) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1102.0) & (original description: Putative HDA8, Description = Histone deacetylase 8, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf00949_146771-151340' '(at3g44750 : 108.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 84.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 216.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = )' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf02207_106091-117982' '(at5g63110 : 724.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 666.0) no description available & (p56521|hdac_maize : 560.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 397.0) no description available & (reliability: 1448.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf02786_13477-27787' '(at3g18520 : 638.0) Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation.; histone deacetylase 15 (HDA15); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: DNA mediated transformation, histone deacetylation; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9308 Blast hits to 9105 proteins in 1476 species: Archae - 223; Bacteria - 3234; Metazoa - 1500; Fungi - 655; Plants - 551; Viruses - 0; Other Eukaryotes - 3145 (source: NCBI BLink). & (gnl|cdd|30472 : 289.0) no description available & (gnl|cdd|36557 : 286.0) no description available & (p56521|hdac_maize : 84.7) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1276.0) & (original description: Putative HDA15, Description = Histone deacetylase 15, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf03077_4795-18699' '(gnl|cdd|35494 : 586.0) no description available & (at5g67320 : 554.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 245.0) no description available & (p93107|pf20_chlre : 117.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1108.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf03839_197727-206483' '(at5g26040 : 492.0) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36558 : 437.0) no description available & (gnl|cdd|30472 : 164.0) no description available & (reliability: 984.0) & (original description: Putative HDA2, Description = Histone deacetylase 2, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04260_103326-113957' '(at5g03740 : 159.0) HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression; histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). & (q8ljs2|hd2a_soybn : 149.0) Histone deacetylase 2a (HD2a) (Nucleolar histone deacetylase HD2-p39) - Glycine max (Soybean) & (reliability: 318.0) & (original description: Putative HD2c, Description = Type 2 histone deacetylase c, PFAM = PF13912)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04854_234361-254148' '(gnl|cdd|35494 : 592.0) no description available & (at5g67320 : 561.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 241.0) no description available & (p93107|pf20_chlre : 114.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1122.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04995_925385-947965' '(gnl|cdd|35494 : 457.0) no description available & (at5g67320 : 445.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 187.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 890.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08513)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf06769_498440-504886' '(q9m4u5|hd2b_maize : 159.0) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (at5g03740 : 150.0) HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression; histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = PF13912)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07147_27439-43071' '(at5g55760 : 669.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 403.0) no description available & (gnl|cdd|29378 : 327.0) no description available & (reliability: 1338.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07793_349152-358171' '(gnl|cdd|36556 : 568.0) no description available & (at5g63110 : 562.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (p56521|hdac_maize : 426.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 343.0) no description available & (reliability: 1124.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07793_375760-380732' '(at5g63110 : 668.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 653.0) no description available & (p56521|hdac_maize : 517.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 397.0) no description available & (reliability: 1336.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf08836_175550-193516' '(at5g55760 : 587.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 340.0) no description available & (gnl|cdd|29378 : 264.0) no description available & (reliability: 1174.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146;PF02146)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf09416_578950-583642' '(at3g44750 : 106.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (o24591|hd2a_maize : 85.5) Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nucleolar histone deacetylase HD2-p39) - Zea mays (Maize) & (reliability: 212.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = )' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf10863_6429-14525' '(at4g38130 : 816.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 720.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|36556 : 690.0) no description available & (gnl|cdd|85068 : 442.0) no description available & (reliability: 1632.0) & (original description: Putative HDAC2, Description = Histone deacetylase 2, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf11778_151786-161060' '(at3g44680 : 794.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (gnl|cdd|36556 : 676.0) no description available & (p56521|hdac_maize : 466.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 389.0) no description available & (reliability: 1588.0) & (original description: Putative HDA9, Description = Histone deacetylase 9, PFAM = PF00850)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf15435_9397-19734' '(at5g09230 : 520.0) Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 2 (SRT2); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: chromatin silencing, defense response to bacterium, negative regulation of defense response, regulation of transcription, DNA-dependent; LOCATED IN: chromatin silencing complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 1 (TAIR:AT5G55760.1); Has 6471 Blast hits to 6454 proteins in 2013 species: Archae - 152; Bacteria - 3779; Metazoa - 822; Fungi - 681; Plants - 106; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink). & (gnl|cdd|37894 : 400.0) no description available & (gnl|cdd|29377 : 371.0) no description available & (reliability: 1040.0) & (original description: Putative SRT2, Description = NAD-dependent protein deacylase SRT2, PFAM = PF02146)' T
'27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf15972_190191-203903' '(at5g61060 : 857.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (gnl|cdd|85068 : 296.0) no description available & (gnl|cdd|36557 : 265.0) no description available & (p56521|hdac_maize : 106.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1714.0) & (original description: Putative HDA5, Description = Histone deacetylase 5, PFAM = PF00850)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold2030_1-6498' '(gnl|cdd|36570 : 183.0) no description available & (at1g11950 : 174.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold6529_38720-57053' '(at5g04240 : 748.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (gnl|cdd|36460 : 245.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1496.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold12363_1286-6359' '(at5g06550 : 712.0) CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species: Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (gnl|cdd|37341 : 382.0) no description available & (reliability: 1424.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase PSR, PFAM = PF13621;PF00646)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold37682_9839-20576' '(at1g78280 : 686.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 1372.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF12937;PF13621)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold1792_302168-320289' '(at1g78280 : 1107.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 2214.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF13621;PF00646)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold1792_304361-320334' '(at1g78280 : 958.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 430.0) no description available & (reliability: 1916.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold3211_343708-352626' '(at1g30810 : 722.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT2G34880.1). & (gnl|cdd|36460 : 464.0) no description available & (gnl|cdd|66093 : 165.0) no description available & (reliability: 1444.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5B, PFAM = PF05965;PF02373;PF02375;PF02928;PF05964)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold4667_33535-53813' '(at1g63490 : 859.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36460 : 354.0) no description available & (gnl|cdd|66093 : 160.0) no description available & (reliability: 1718.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5B, PFAM = PF01388;PF08429;PF08429;PF02928;PF02373;PF02375;PF00628)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold6056_73031-81583' '(at5g46910 : 811.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 279.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1622.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02928;PF02373;PF02375)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00010225ctg008_420-6958' '(at5g46910 : 829.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 280.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1658.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02928;PF02375)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00017928ctg000_1319-7949' '(at5g46910 : 848.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 285.0) no description available & (gnl|cdd|66093 : 143.0) no description available & (reliability: 1696.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02375;PF02928;PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00036218ctg007_5918-16827' '(at3g48430 : 891.0) Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.; relative of early flowering 6 (REF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1); Has 105567 Blast hits to 35250 proteins in 1010 species: Archae - 0; Bacteria - 23; Metazoa - 99094; Fungi - 2247; Plants - 673; Viruses - 7; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|36460 : 179.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1782.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf00751_574543-598740' '(at5g04240 : 747.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (gnl|cdd|36460 : 238.0) no description available & (gnl|cdd|66093 : 141.0) no description available & (reliability: 1494.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01063_418537-424533' '(at5g46910 : 582.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 256.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1164.0) & (original description: Putative glysoja_034044, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01450_107442-129345' '(at1g78280 : 1148.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 422.0) no description available & (reliability: 2296.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01826_745679-756341' '(at3g48430 : 853.0) Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.; relative of early flowering 6 (REF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1); Has 105567 Blast hits to 35250 proteins in 1010 species: Archae - 0; Bacteria - 23; Metazoa - 99094; Fungi - 2247; Plants - 673; Viruses - 7; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|36460 : 173.0) no description available & (gnl|cdd|66093 : 137.0) no description available & (reliability: 1706.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf02145_660014-667059' '(at1g11950 : 778.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36570 : 636.0) no description available & (reliability: 1556.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373;PF10497)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03326_170541-176325' '(at5g46910 : 594.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 260.0) no description available & (gnl|cdd|66093 : 135.0) no description available & (reliability: 1188.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03435_13183-22582' '(at1g08620 : 1103.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 489.0) no description available & (gnl|cdd|66093 : 172.0) no description available & (reliability: 2206.0) & (original description: Putative JMJ703, Description = Lysine-specific demethylase JMJ703, PFAM = PF02373;PF02375;PF05965;PF02928;PF05964)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03445_456277-467133' '(at5g63080 : 544.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37342 : 307.0) no description available & (reliability: 1088.0) & (original description: Putative At5g63080, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF13621)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf04812_167733-174234' '(at5g46910 : 848.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 283.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1696.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02373;PF02375;PF02928)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_268891-290114' '(at1g63490 : 739.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36460 : 332.0) no description available & (gnl|cdd|66093 : 160.0) no description available & (reliability: 1478.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5A, PFAM = PF02375;PF01388;PF08429;PF08429;PF02928;PF02373;PF00628)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_273733-277252' '(at1g63490 : 243.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|71858 : 83.4) no description available & (reliability: 486.0) & (original description: Putative glysoja_004788, Description = Lysine-specific demethylase rbr-2, PFAM = PF08429)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_277253-279187' '(at1g63490 : 107.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = Transcription factor jumonji (JmjC) domain protein, PFAM = )' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf07724_73241-79315' '(at3g20810 : 551.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37343 : 335.0) no description available & (reliability: 1102.0) & (original description: Putative JMJ30, Description = Lysine-specific demethylase JMJ30, PFAM = PF13621)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf09658_14314-22932' '(at1g08620 : 1097.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 491.0) no description available & (gnl|cdd|66093 : 172.0) no description available & (reliability: 2194.0) & (original description: Putative JMJ19, Description = Probable inactive lysine-specific demethylase JMJ19, PFAM = PF02373;PF02928;PF05964;PF02375;PF05965)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf09792_428614-438897' '(at1g08620 : 563.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 306.0) no description available & (gnl|cdd|66093 : 116.0) no description available & (reliability: 1126.0) & (original description: Putative JMJ4, Description = Lysine-specific demethylase 5A, PFAM = PF02375;PF02928;PF02373)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf10920_101688-108632' '(at5g06550 : 712.0) CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species: Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (gnl|cdd|37341 : 385.0) no description available & (reliability: 1424.0) & (original description: Putative jmjd6, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF13621;PF00646)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf11961_79780-94608' '(at5g46910 : 818.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 279.0) no description available & (gnl|cdd|66093 : 145.0) no description available & (reliability: 1636.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02375;PF02373;PF02928)' T
'27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf18328_55325-61570' '(at5g04240 : 368.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = )' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.3scaffold15970_27724-32503' '(at4g32551 : 82.8) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF08513)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold115_1100816-1105595' '(at4g32551 : 83.2) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 165.6) & (original description: Putative , Description = , PFAM = PF08513)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold766_419975-422478' '(at2g32700 : 146.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (reliability: 292.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold1304_113231-219626' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 546.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold3299_248181-255669' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 145.0) no description available & (gnl|cdd|35487 : 117.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold3299_250669-260289' '(at2g32700 : 148.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 91.6) no description available & (reliability: 296.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00002007ctg012_323-2947' '(at4g32551 : 100.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 196.4) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = )' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00010967ctg009_81-6423' '(at4g32551 : 300.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 160.0) no description available & (gnl|cdd|35487 : 125.0) no description available & (reliability: 596.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00010967ctg012_1-3300' '(at4g32551 : 290.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 150.0) no description available & (gnl|cdd|35493 : 115.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00018251ctg008_24876-27583' '(at2g32700 : 135.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (reliability: 270.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00029274ctg004_1-4691' '(at4g32551 : 103.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 191.8) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF08513)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf00920_636456-645192' '(at2g32700 : 816.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 198.0) no description available & (gnl|cdd|35487 : 178.0) no description available & (p93107|pf20_chlre : 82.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1632.0) & (original description: Putative LUH, Description = Transcriptional corepressor LEUNIG_HOMOLOG, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_250400-370264' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 546.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_268469-283098' '(at4g32551 : 289.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 153.0) no description available & (gnl|cdd|35487 : 123.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_276220-282098' '(at4g32551 : 303.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 161.0) no description available & (gnl|cdd|35487 : 128.0) no description available & (reliability: 600.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf05582_209739-219330' '(at2g32700 : 832.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 201.0) no description available & (gnl|cdd|35487 : 187.0) no description available & (p93107|pf20_chlre : 83.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1664.0) & (original description: Putative LUH, Description = Transcriptional corepressor LEUNIG_HOMOLOG, PFAM = PF00400;PF00400;PF00400;PF00400;PF08513)' T
'27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf05609_270914-275936' '(at4g32551 : 82.4) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF08513)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold2844_61256-68280' '(at1g22310 : 118.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PGSC0003DMG400012552, Description = 5'-adenylylsulfate reductase-like 4, PFAM = )' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold11121_1-3929' '(at3g15790 : 102.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold25634_14706-25123' '(at1g22310 : 126.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative MBD117, Description = DNA-binding, integrase-type, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.5scaffold957_81236-91653' '(at1g22310 : 124.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MBD117, Description = DNA-binding, integrase-type, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.5scaffold1495_279318-286342' '(at1g22310 : 117.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MBD117, Description = Methylcytosine binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben044scf00008028ctg000_2432-9328' '(at1g22310 : 109.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400012552, Description = Methyl-CpG-binding domain-containing protein 8, PFAM = )' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben044scf00017947ctg006_1-1372' '(at3g01460 : 84.0) Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.; methyl-CPG-binding domain 9 (MBD9); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: photoperiodism, flowering, secondary shoot formation, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), DNA-binding, integrase-type (InterPro:IPR016177), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G77250.1); Has 6416 Blast hits to 3988 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 4085; Fungi - 602; Plants - 1260; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative MBD9, Description = Methyl-CpG-binding domain-containing protein 9, PFAM = )' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf00151_350524-355960' '(at3g15790 : 100.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf00981_537393-541245' '(at5g35330 : 246.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 86.2) no description available & (gnl|cdd|39363 : 83.9) no description available & (reliability: 492.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF07496;PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf02112_83773-90804' '(at3g15790 : 80.1) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf02530_247009-251128' '(at5g35330 : 241.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 84.6) no description available & (reliability: 482.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF07496;PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03066_5373-29902' '(at3g01460 : 815.0) Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.; methyl-CPG-binding domain 9 (MBD9); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: photoperiodism, flowering, secondary shoot formation, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), DNA-binding, integrase-type (InterPro:IPR016177), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G77250.1); Has 6416 Blast hits to 3988 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 4085; Fungi - 602; Plants - 1260; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (reliability: 1630.0) & (original description: Putative , Description = Putative methyl-CpG-binding domain-containing protein 9-like, PFAM = PF00439;PF15612;PF00628;PF02791;PF15613;PF05965)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03737_191536-198479' '(at3g15790 : 82.8) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03930_51627-55461' '(at3g15790 : 100.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative MBD1, Description = DNA methylation protein MBD1, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03941_208795-215333' '(at3g46580 : 86.7) Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 5 (MBD5); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: perinucleolar chromocenter; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 6 (TAIR:AT5G59380.1); Has 120 Blast hits to 118 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative MBD5, Description = MBD5, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07585_96801-105845' '(at1g22310 : 114.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative MBD117, Description = Methylcytosine binding domain protein, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07764_111631-117225' '(at3g46580 : 87.8) Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 5 (MBD5); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: perinucleolar chromocenter; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 6 (TAIR:AT5G59380.1); Has 120 Blast hits to 118 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative MBD5, Description = MBD5, PFAM = PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07854_10256-15644' '(at5g59800 : 97.8) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. Interacts with arginine methyltransferase 11. (AtPRMT11; methyl-CPG-binding domain 7 (MBD7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400015535, Description = , PFAM = PF01429;PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf08045_192853-196972' '(at5g35330 : 253.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 84.2) no description available & (reliability: 506.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF01429;PF07496)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf11723_181963-184653' '(at3g63030 : 177.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 4 (MBD4); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 1 (TAIR:AT4G22745.1); Has 159 Blast hits to 159 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 112; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39363 : 92.0) no description available & (reliability: 354.0) & (original description: Putative Os05g0404700, Description = Os05g0404700 protein, PFAM = PF07496;PF01429)' T
'27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf12266_1041565-1046154' '(at3g15790 : 105.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold1231_64687-72873' '(at2g43500 : 720.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1440.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold17835_17816-27476' '(at4g35590 : 202.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|65798 : 82.0) no description available & (reliability: 404.0) & (original description: Putative RKD5, Description = Protein RKD5, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold21746_5146-12741' '(at4g24020 : 880.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 85.5) no description available & (reliability: 1760.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold37150_11286-17737' '(at4g24020 : 268.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF02042;PF00564)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold51625_7072-13324' '(at4g35270 : 755.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT2G17150.1); Has 705 Blast hits to 622 proteins in 59 species: Archae - 0; Bacteria - 9; Metazoa - 13; Fungi - 14; Plants - 585; Viruses - 3; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|47941 : 84.1) no description available & (reliability: 1510.0) & (original description: Putative NLP2, Description = Protein NLP2, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.5scaffold6341_72280-75362' '(at5g53040 : 129.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00014858ctg005_1-2333' '(at2g43500 : 228.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative NLP1, Description = NIN-like protein 1, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00015131ctg009_2085-7055' '(at4g24020 : 183.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00015131ctg009_7880-11910' '(at4g24020 : 169.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00028753ctg001_1400-8753' '(at4g24020 : 893.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|47941 : 86.1) no description available & (reliability: 1786.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00031113ctg000_11776-18125' '(at4g24020 : 280.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00031537ctg000_1-3665' '(at4g35270 : 420.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT2G17150.1); Has 705 Blast hits to 622 proteins in 59 species: Archae - 0; Bacteria - 9; Metazoa - 13; Fungi - 14; Plants - 585; Viruses - 3; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|47941 : 85.7) no description available & (reliability: 840.0) & (original description: Putative NLP1, Description = NIN-like protein 1, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf00063_1335079-1338648' '(at1g18790 : 150.0) RWP-RK domain-containing protein; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT1G74480.1); Has 558 Blast hits to 554 proteins in 54 species: Archae - 0; Bacteria - 12; Metazoa - 59; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf02041_427581-437241' '(at4g35590 : 175.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|65798 : 81.6) no description available & (reliability: 350.0) & (original description: Putative ARALYDRAFT_491087, Description = RWP-RK domain-containing protein, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf03850_342572-350586' '(at4g24020 : 868.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 85.5) no description available & (reliability: 1736.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf04083_147619-150701' '(at5g53040 : 130.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf05154_206949-209708' '(at5g53040 : 102.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RKD4, Description = AtRKD4, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf05937_280147-287013' '(at4g24020 : 220.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf06249_89950-93708' '(at1g18790 : 151.0) RWP-RK domain-containing protein; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT1G74480.1); Has 558 Blast hits to 554 proteins in 54 species: Archae - 0; Bacteria - 12; Metazoa - 59; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative RKD2, Description = Protein RKD2, PFAM = PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf06439_282347-291354' '(at2g43500 : 732.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 83.9) no description available & (reliability: 1464.0) & (original description: Putative NLP8, Description = Protein NLP8, PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08326_69861-76312' '(at4g24020 : 281.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF00564;PF02042)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08326_76015-83194' '(at4g24020 : 936.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 86.2) no description available & (reliability: 1872.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF02042;PF00564)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08391_32268-42349' '(at2g43500 : 724.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1448.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_4685-11203' '(at1g64530 : 192.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: NIN like protein 7 (TAIR:AT4G24020.1); Has 703 Blast hits to 646 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 585; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative , Description = , PFAM = PF02042;PF00564)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_21880-49106' '(at4g24020 : 211.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative PGSC0003DMG400008649, Description = , PFAM = PF03195)' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_28432-238840' '(at4g24020 : 175.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative LOC100216574, Description = BHLH transcription factor-like protein, PFAM = )' T
'27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10968_18834-25068' '(at1g64530 : 159.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: NIN like protein 7 (TAIR:AT4G24020.1); Has 703 Blast hits to 646 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 585; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF00564;PF02042)' T
'27.3.61' 'RNA.regulation of transcription.NPR1/NIM1' '' ''
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'nbv0.5scaffold898_191509-241459' '(q39601|ssrp1_catro : 853.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 762.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 598.0) no description available & (gnl|cdd|67166 : 333.0) no description available & (reliability: 1524.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF08512;PF03531;PF17292)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00016163ctg008_10640-13199' '(at1g76110 : 171.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G04880.1); Has 3338 Blast hits to 2805 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2430; Fungi - 276; Plants - 321; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative NFD9, Description = High mobility group B protein 9, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00017064ctg003_1-3009' '(at5g23420 : 112.0) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 224.0) & (original description: Putative HMGB4, Description = High mobility group B protein 4, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00027376ctg003_7409-14876' '(q39601|ssrp1_catro : 835.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 675.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 572.0) no description available & (gnl|cdd|67166 : 262.0) no description available & (reliability: 1350.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF00505;PF08512;PF17292;PF03531)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00034559ctg013_8790-19036' '(at5g08630 : 588.0) DDT domain-containing protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), WSTF/Acf1/Cbp146 (InterPro:IPR013136); Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4; Bacteria - 337; Metazoa - 2683; Fungi - 719; Plants - 380; Viruses - 89; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|36459 : 102.0) no description available & (reliability: 1176.0) & (original description: Putative BnaC09g47370D, Description = BnaC09g47370D protein, PFAM = PF15613;PF10537;PF02791)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00414_333526-344399' '(at3g13350 : 276.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G55650.1); Has 1937 Blast hits to 1906 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 1434; Fungi - 73; Plants - 249; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|37955 : 112.0) no description available & (gnl|cdd|47805 : 84.1) no description available & (reliability: 552.0) & (original description: Putative HMGB10, Description = High mobility group B protein 10, PFAM = PF01388;PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00446_240183-249598' '(at5g64630 : 607.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36227 : 448.0) no description available & (gnl|cdd|29257 : 130.0) no description available & (reliability: 1214.0) & (original description: Putative FAS2, Description = Chromatin assembly factor 1 subunit FAS2, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00671_53008-56458' '(p40619|hmgl_iponi : 99.4) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g20696 : 90.1) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative hmg1, Description = HMG1/2-like protein, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00807_359963-368711' '(at1g76110 : 314.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G04880.1); Has 3338 Blast hits to 2805 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2430; Fungi - 276; Plants - 321; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|37955 : 114.0) no description available & (gnl|cdd|47805 : 92.2) no description available & (reliability: 628.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF01388;PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf01326_996505-1004851' '(q39601|ssrp1_catro : 912.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 750.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 635.0) no description available & (gnl|cdd|67166 : 331.0) no description available & (reliability: 1500.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF08512;PF00505;PF17292;PF03531)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03673_269670-273099' '(p40619|hmgl_iponi : 95.9) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g20696 : 90.9) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative hmg1, Description = HMG1/2-like protein, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03882_659700-668824' '(at5g64630 : 610.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36227 : 447.0) no description available & (gnl|cdd|29257 : 127.0) no description available & (reliability: 1220.0) & (original description: Putative FAS2, Description = Chromatin assembly factor 1 subunit FAS2, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03985_358027-363510' '(at4g23800 : 226.0) HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1). & (reliability: 452.0) & (original description: Putative HMGB6, Description = High mobility group B protein 6, PFAM = PF00505;PF00505;PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf04181_73819-77619' '(at5g23420 : 112.0) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 224.0) & (original description: Putative HMG7, Description = HMG transcription factor, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf06172_34157-41642' '(q39601|ssrp1_catro : 912.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 749.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 633.0) no description available & (gnl|cdd|67166 : 328.0) no description available & (reliability: 1498.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF03531;PF00505;PF17292;PF08512)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf07616_244308-254264' '(at5g08630 : 606.0) DDT domain-containing protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), WSTF/Acf1/Cbp146 (InterPro:IPR013136); Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4; Bacteria - 337; Metazoa - 2683; Fungi - 719; Plants - 380; Viruses - 89; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|36459 : 111.0) no description available & (reliability: 1212.0) & (original description: Putative BnaC09g47370D, Description = BnaC09g47370D protein, PFAM = PF10537;PF15613;PF02791)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf09442_625682-628907' '(at1g20696 : 112.0) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (p40619|hmgl_iponi : 108.0) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 224.0) & (original description: Putative T231, Description = DNA-binding protein, PFAM = PF00505)' T
'27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf23557_73767-77297' '(at5g23420 : 94.7) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 189.4) & (original description: Putative hmg1, Description = DNA-binding protein MNB1B, PFAM = PF00505)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.3scaffold17512_17669-32615' '(at3g14980 : 590.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 1180.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.3scaffold47727_374-15546' '(at2g36720 : 626.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative BnaC04g16390D, Description = BnaC04g16390D protein, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.5scaffold352_743091-758392' '(at3g14980 : 584.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 1168.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.5scaffold4795_148342-160231' '(at3g51120 : 581.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 120.0) no description available & (gnl|cdd|47987 : 114.0) no description available & (reliability: 1162.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF03126;PF02213;PF02201)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00004219ctg004_1-2510' '(at3g51120 : 112.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF13771)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00005638ctg009_178-18051' '(at2g36720 : 547.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1094.0) & (original description: Putative glysoja_041038, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00008017ctg012_13360-23634' '(at5g36740 : 491.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00010044ctg004_1-5220' '(at3g14980 : 243.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00011642ctg012_513-5912' '(at5g12400 : 138.0) DNA binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative Sb02g042000, Description = Putative uncharacterized protein Sb02g042000, PFAM = )' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00011798ctg006_649-7564' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00015133ctg005_1-10457' '(at4g14920 : 634.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative BnaC05g03470D, Description = BnaC05g03470D protein, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00021453ctg014_544-4144' '(at5g12400 : 377.0) DNA binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36686 : 168.0) no description available & (reliability: 754.0) & (original description: Putative CHD, Description = Chromodomain helicase DNA binding protein, PFAM = PF02791;PF15612;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00058_975369-996839' '(at4g14920 : 623.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1246.0) & (original description: Putative At4g14920, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00158_400662-407285' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00167_36796-50725' '(at4g14920 : 629.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1258.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00288_1161922-1172644' '(at5g58610 : 639.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1278.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF16135;PF00628;PF05641;PF00583)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00428_1110288-1115709' '(at1g05380 : 304.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT4G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative PGSC0003DMG400026258, Description = Putative ovule protein, PFAM = PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00573_185917-194123' '(at5g58610 : 446.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative RCOM_1587400, Description = DNA binding protein, putative, PFAM = PF16135;PF05641;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00974_28931-40224' '(at5g61120 : 92.8) BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400020472, Description = , PFAM = )' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01025_508050-520656' '(at2g37520 : 842.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G53680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1636.0) & (original description: Putative At2g37520, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein, PFAM = PF16135;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01433_822590-836613' '(at3g51120 : 594.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 141.0) no description available & (gnl|cdd|47987 : 113.0) no description available & (reliability: 1188.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF02201;PF02213;PF03126)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01663_174-14473' '(at5g36740 : 473.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf02362_253305-268812' '(at5g58610 : 451.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF00628;PF16135;PF05641;PF00583)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf02502_1031969-1056095' '(at2g36720 : 738.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1476.0) & (original description: Putative At2g36720, Description = Putative PHD-type zinc finger protein, PFAM = PF00628;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf03046_254439-281909' '(at2g36720 : 619.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1238.0) & (original description: Putative PGSC0003DMG400003902, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf03289_95981-109297' '(at2g27980 : 595.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G36720.1); Has 477 Blast hits to 420 proteins in 59 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 2; Plants - 374; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 1146.0) & (original description: Putative BnaC04g39410D, Description = BnaC04g39410D protein, PFAM = PF00628;PF16135;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf05419_72430-87409' '(at4g14920 : 631.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1262.0) & (original description: Putative At4g14920, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, PFAM = PF16135;PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07034_900793-919112' '(at3g51120 : 618.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 129.0) no description available & (gnl|cdd|47987 : 117.0) no description available & (reliability: 1236.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF03126;PF02201;PF02213)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07441_331349-340985' '(at1g43770 : 145.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G16680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PGSC0003DMG400032558, Description = BnaCnng34380D protein, PFAM = )' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07690_10640-16974' '(at1g43770 : 101.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G16680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative 3AF1, Description = 3AF1 protein, PFAM = PF02892;PF02892)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf11860_1-8853' '(at5g58610 : 444.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF00628;PF05641;PF16135)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13103_167654-192836' '(at3g51120 : 593.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 119.0) no description available & (gnl|cdd|47987 : 110.0) no description available & (reliability: 1186.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF02201;PF02213;PF03126)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13103_177456-192677' '(at3g51120 : 414.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 117.0) no description available & (gnl|cdd|47987 : 110.0) no description available & (reliability: 828.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02201;PF03126;PF02213)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13478_17979-23544' '(at5g22260 : 642.0) Sporophytic factor controlling anther and pollen development. Mutants fail to make functional pollen;pollen degeneration occurs after microspore release and the tapetum also appears abnormally vacuolated. Similar to PHD-finger motif transcription factors.; male sterility 1 (MS1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 884 Blast hits to 874 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 282; Fungi - 312; Plants - 261; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|37055 : 128.0) no description available & (reliability: 1284.0) & (original description: Putative MS1, Description = PHD finger protein MALE STERILITY 1, PFAM = PF00628)' T
'27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf15694_81217-85938' '(at3g53680 : 245.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative TCM_040248, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain, putative, PFAM = )' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.3scaffold63629_6776-10000' '(at3g19380 : 136.0) plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink). & (q64ha9|spl11_orysa : 97.1) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.5) no description available & (reliability: 272.0) & (original description: Putative Sb06g017230, Description = Putative uncharacterized protein Sb06g017230, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.3scaffold80838_3874-6992' '(at5g64660 : 324.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 94.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 85.3) no description available & (reliability: 648.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.5scaffold631_133575-189733' '(at3g18710 : 142.0) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 29 (PUB29); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to chitin, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1922 Blast hits to 1905 proteins in 98 species: Archae - 0; Bacteria - 12; Metazoa - 142; Fungi - 0; Plants - 1653; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 28, PFAM = )' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00000152ctg011_19325-22736' '(at3g49810 : 532.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.8) no description available & (reliability: 1064.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF04564;PF05804)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00030690ctg007_6002-9551' '(at2g35930 : 196.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 83.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 392.0) & (original description: Putative Os04g0589700, Description = OSJNBa0086O06.11 protein, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00047250ctg000_253-3566' '(at5g37490 : 341.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 109.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.1) no description available & (reliability: 682.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00165_320458-323678' '(at2g35930 : 445.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 105.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 90.7) no description available & (reliability: 890.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00165_446365-449621' '(at3g11840 : 322.0) Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.; plant U-box 24 (PUB24); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: respiratory burst involved in defense response, protein autoubiquitination, response to chitin, defense response; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2348 Blast hits to 2308 proteins in 197 species: Archae - 0; Bacteria - 24; Metazoa - 273; Fungi - 129; Plants - 1697; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 92.8) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 80.3) no description available & (reliability: 644.0) & (original description: Putative PUB24, Description = E3 ubiquitin-protein ligase PUB24, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00851_227205-230909' '(at2g35930 : 306.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 83.2) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00927_851350-854681' '(at5g37490 : 287.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 110.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.0) no description available & (reliability: 574.0) & (original description: Putative ACRE74, Description = Avr9/Cf-9 rapidly elicited protein 74, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00984_936748-940082' '(at5g37490 : 267.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 112.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.5) no description available & (reliability: 534.0) & (original description: Putative CMPG, Description = CMPG, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf01795_907057-910370' '(at5g37490 : 367.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 118.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.8) no description available & (reliability: 734.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf02936_85358-88769' '(at3g49810 : 531.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.2) no description available & (reliability: 1062.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF05804;PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf03915_5616-8839' '(at1g49780 : 131.0) plant U-box 26 (PUB26); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 25 (TAIR:AT3G19380.1); Has 2464 Blast hits to 2403 proteins in 144 species: Archae - 0; Bacteria - 20; Metazoa - 134; Fungi - 16; Plants - 2081; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (q64ha9|spl11_orysa : 98.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.6) no description available & (reliability: 262.0) & (original description: Putative Sb06g017230, Description = Putative uncharacterized protein Sb06g017230, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04418_703799-707019' '(at3g11840 : 320.0) Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.; plant U-box 24 (PUB24); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: respiratory burst involved in defense response, protein autoubiquitination, response to chitin, defense response; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2348 Blast hits to 2308 proteins in 197 species: Archae - 0; Bacteria - 24; Metazoa - 273; Fungi - 129; Plants - 1697; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 89.4) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 88.4) no description available & (reliability: 640.0) & (original description: Putative PUB24, Description = E3 ubiquitin-protein ligase PUB24, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04418_797284-800492' '(at2g35930 : 440.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 129.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.2) no description available & (reliability: 880.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04699_218250-221518' '(at2g35930 : 397.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 101.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 85.7) no description available & (reliability: 794.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07278_257674-260921' '(at3g19380 : 451.0) plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink). & (q64ha9|spl11_orysa : 107.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 98.8) no description available & (reliability: 902.0) & (original description: Putative PUB25, Description = U-box domain-containing protein 25, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07482_152751-156034' '(at2g35930 : 192.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 80.9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative Os04g0589700, Description = OSJNBa0086O06.11 protein, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07482_152850-156059' '(at2g35930 : 178.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative Ccrd_021183, Description = Armadillo-like helical, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf08855_264814-268163' '(at5g37490 : 304.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 130.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.1) no description available & (reliability: 608.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf19133_1928-5187' '(at5g64660 : 255.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 98.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 86.4) no description available & (reliability: 510.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T
'27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf33026_15397-18656' '(at5g64660 : 326.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 95.9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 86.8) no description available & (reliability: 652.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold435_38236-91233' '(at1g79020 : 120.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G16690.1); Has 409 Blast hits to 407 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 106; Plants - 67; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold435_87952-93321' '(at1g16690 : 259.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 104.0) no description available & (reliability: 518.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold37638_11188-20606' '(at2g10950 : 137.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 187 Blast hits to 175 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 3; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF03909)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold44594_788-9524' '(at3g20740 : 508.0) Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.; FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink). & (q8vzy6|fie2_maize : 496.0) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT ENDOSPERM 2) - Zea mays (Maize) & (gnl|cdd|36252 : 314.0) no description available & (gnl|cdd|29257 : 92.0) no description available & (reliability: 1016.0) & (original description: Putative FIE, Description = Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM, PFAM = PF00400;PF00400)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold73063_4916-8617' '(at4g02020 : 105.0) Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG.; SWINGER (SWN); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT2G23380.1); Has 5041 Blast hits to 4734 proteins in 465 species: Archae - 0; Bacteria - 399; Metazoa - 2132; Fungi - 472; Plants - 1030; Viruses - 0; Other Eukaryotes - 1008 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative EZ1, Description = CURLY LEAF-like 1, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.5scaffold1097_327024-332393' '(at1g16690 : 224.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 82.8) no description available & (reliability: 448.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.5scaffold3093_30784-36106' '(at5g51230 : 152.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben044scf00018891ctg005_915-3485' '(at3g49800 : 139.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT5G65910.1); Has 225 Blast hits to 208 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 3; Plants - 201; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative Sb03g035640, Description = Putative uncharacterized protein Sb03g035640, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf00174_10145-32999' '(q8vzy6|fie2_maize : 623.0) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT ENDOSPERM 2) - Zea mays (Maize) & (at3g20740 : 617.0) Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.; FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink). & (gnl|cdd|36252 : 423.0) no description available & (gnl|cdd|29257 : 97.8) no description available & (reliability: 1234.0) & (original description: Putative FIE, Description = Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM, PFAM = PF00400;PF00400)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf01353_184398-205720' '(at4g02020 : 802.0) Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG.; SWINGER (SWN); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT2G23380.1); Has 5041 Blast hits to 4734 proteins in 465 species: Archae - 0; Bacteria - 399; Metazoa - 2132; Fungi - 472; Plants - 1030; Viruses - 0; Other Eukaryotes - 1008 (source: NCBI BLink). & (q8s4p4|ez3_maize : 529.0) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (gnl|cdd|36295 : 513.0) no description available & (gnl|cdd|47645 : 118.0) no description available & (reliability: 1604.0) & (original description: Putative EZA1, Description = Histone-lysine N-methyltransferase EZA1, PFAM = PF00856)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf01933_738180-743934' '(at5g65910 : 240.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf02212_231748-258349' '(at5g51230 : 662.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1324.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf02212_238116-245633' '(at5g51230 : 171.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf04500_67677-90151' '(at5g51230 : 635.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 228.0) no description available & (reliability: 1270.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf07652_171305-176674' '(at1g16690 : 214.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 84.7) no description available & (reliability: 428.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T
'27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf08330_49925-76047' '(at5g51230 : 645.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1290.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'nbv0.5scaffold1497_154455-177096' '(at5g02810 : 342.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g8|prr37_orysa : 315.0) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (gnl|cdd|47754 : 96.9) no description available & (reliability: 684.0) & (original description: Putative APRR7, Description = Two-component response regulator-like APRR7, PFAM = PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'nbv0.5scaffold2058_122884-130638' '(at4g18020 : 363.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 726.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00072;PF00249)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00010384ctg007_5282-22858' '(q689g6|prr95_orysa : 247.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 228.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84491 : 99.5) no description available & (reliability: 456.0) & (original description: Putative BTC1, Description = Pseudo-response regulator, PFAM = PF00072;PF06203)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00010384ctg007_5310-12386' '(q689g6|prr95_orysa : 244.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 223.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84491 : 99.5) no description available & (reliability: 446.0) & (original description: Putative DR11, Description = Pseudo-response regulator, PFAM = PF06203;PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00028090ctg009_1-6627' '(at5g24470 : 298.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g6|prr95_orysa : 284.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (gnl|cdd|47754 : 96.9) no description available & (reliability: 596.0) & (original description: Putative APRR5, Description = Two-component response regulator-like APRR5, PFAM = PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00038658ctg002_579-8049' '(at4g18020 : 359.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 718.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00249;PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf00225_487795-494580' '(q689g6|prr95_orysa : 321.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 267.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47754 : 98.8) no description available & (reliability: 534.0) & (original description: Putative PRR5, Description = Pseudo-response regulator 5, PFAM = PF00072;PF06203)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf00294_419756-433171' '(at5g02810 : 318.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g4|prr73_orysa : 317.0) Two-component response regulator-like PRR73 (Pseudo-response regulator 73) (OsPRR73) - Oryza sativa (Rice) & (gnl|cdd|47754 : 101.0) no description available & (reliability: 636.0) & (original description: Putative APRR7, Description = Two-component response regulator-like APRR7, PFAM = PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf02827_847850-856176' '(at4g18020 : 362.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 724.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00072;PF00249)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf05009_442223-459688' '(q689g8|prr37_orysa : 344.0) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (at5g02810 : 303.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47754 : 93.8) no description available & (reliability: 606.0) & (original description: Putative PRR37, Description = Two-component response regulator-like PRR37, PFAM = PF06203;PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf11469_26089-33446' '(at5g61380 : 460.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q689g9|prr1_orysa : 382.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 920.0) & (original description: Putative toc1, Description = TOC1, PFAM = PF06203;PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf11685_108399-116231' '(at4g18020 : 352.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 704.0) & (original description: Putative glk1, Description = Two-component response regulator-like APRR2, PFAM = PF00249;PF00072)' T
'27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf12314_24672-28075' '(at5g61380 : 144.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q689g9|prr1_orysa : 119.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative prr1, Description = TOC1, PFAM = PF00072)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold532_139734-146633' '(at5g46640 : 139.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 278.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold1366_47659-62093' '(at4g12750 : 720.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1440.0) & (original description: Putative RLT3, Description = Homeobox-DDT domain protein RLT3, PFAM = PF15612;PF02791;PF15613)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold1916_58184-67455' '(at1g23230 : 137.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (reliability: 274.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold2440_76960-81661' '(at1g75560 : 223.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative pco105342b, Description = DNA-binding protein HEXBP, PFAM = PF13917;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold4035_33108-43606' '(at1g72650 : 286.0) Arabidopsis thaliana myb family transcription factor (At1g72650); TRF-like 6 (TRFL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 3 (TAIR:AT1G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative MYB30, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold4373_53110-60509' '(at3g58470 : 292.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 219.0) no description available & (reliability: 584.0) & (original description: Putative N6AMT2, Description = Protein-lysine N-methyltransferase N6AMT2, PFAM = PF10237)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold5512_49857-57135' '(gnl|cdd|37778 : 187.0) no description available & (at1g76010 : 176.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 83.3) no description available & (reliability: 352.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold5513_1-7076' '(at5g46640 : 138.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 276.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold6999_48260-51931' '(at1g10200 : 296.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 265.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 161.0) no description available & (reliability: 592.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold8558_5411-39574' '(at1g77800 : 540.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (gnl|cdd|36172 : 260.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (reliability: 1080.0) & (original description: Putative jade1, Description = Protein Jade-1, PFAM = PF13832;PF13832;PF13831;PF13831)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold10752_42424-45889' '(at1g76500 : 130.0) Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light; SUPPRESSOR OF PHYB-4#3 (SOB3); FUNCTIONS IN: DNA binding; INVOLVED IN: photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G20900.1); Has 2179 Blast hits to 1721 proteins in 190 species: Archae - 0; Bacteria - 553; Metazoa - 266; Fungi - 109; Plants - 845; Viruses - 16; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 260.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold10860_2148-5112' '(at2g45430 : 223.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 412.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold11524_5069-9096' '(at3g28720 : 770.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 1540.0) & (original description: Putative Sb10g022840, Description = Putative uncharacterized protein Sb10g022840, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold12601_9369-14544' '(at4g39680 : 201.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 106.0) no description available & (reliability: 402.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13314_34335-39884' '(at4g12080 : 144.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 126.0) no description available & (reliability: 288.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF02178;PF02178;PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13609_18065-25062' '(at1g54390 : 336.0) ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 2 (ING2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G24010.1); Has 1316 Blast hits to 1312 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 731; Fungi - 422; Plants - 94; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37184 : 116.0) no description available & (gnl|cdd|34639 : 96.7) no description available & (reliability: 672.0) & (original description: Putative ING2, Description = PHD finger protein ING2, PFAM = PF00628;PF12998)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13703_24101-37179' '(at1g77250 : 299.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative glysoja_042669, Description = Histone-lysine N-methyltransferase MLL2, PFAM = PF00628;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold14051_12583-27962' '(at5g11430 : 112.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative TCM_038158, Description = SPOC domain / Transcription elongation factor S-II protein, putative isoform 1, PFAM = PF07744)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold16540_23673-30560' '(at2g33620 : 129.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 258.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold16817_5180-9924' '(gnl|cdd|38117 : 96.6) no description available & (at4g07950 : 88.6) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold19101_1416-19870' '(at5g18230 : 402.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 203.0) no description available & (gnl|cdd|35224 : 127.0) no description available & (reliability: 804.0) & (original description: Putative CNOT3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04153)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold20114_2907-31463' '(at5g10940 : 919.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 695.0) no description available & (reliability: 1838.0) & (original description: Putative At5g10940, Description = Putative uncharacterized protein At5g10940, PFAM = PF00400;PF00400)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold20202_1-1870' '(at3g17450 : 178.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 143.0) no description available & (reliability: 356.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold22555_14991-22987' '(gnl|cdd|37778 : 189.0) no description available & (at1g76010 : 173.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 89.5) no description available & (reliability: 346.0) & (original description: Putative ALBA1, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold24285_10424-15786' '(at1g10170 : 1199.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 713.0) no description available & (reliability: 2398.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold24709_1-8817' '(at1g50620 : 254.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At3g20280, Description = Putative ovule protein, PFAM = PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold27404_1120-6485' '(at4g39680 : 213.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 114.0) no description available & (reliability: 426.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold27845_7525-24574' '(at3g24870 : 914.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1828.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29332_1-25111' '(at5g18230 : 445.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 291.0) no description available & (gnl|cdd|86527 : 256.0) no description available & (reliability: 890.0) & (original description: Putative not3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29593_9945-24376' '(at5g60410 : 263.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02037;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29845_281-4226' '(at2g41870 : 127.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 106.0) no description available & (reliability: 254.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold30224_1004-4448' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold32404_3935-23305' '(at5g63700 : 330.0) zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Plus-3 domain, subgroup (InterPro:IPR018144), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Plus-3 (InterPro:IPR004343), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain;Plus-3;GYF (TAIR:AT5G08430.1); Has 1143 Blast hits to 955 proteins in 114 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 27; Plants - 204; Viruses - 3; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37157 : 88.6) no description available & (gnl|cdd|47987 : 81.0) no description available & (reliability: 660.0) & (original description: Putative LOC100216926, Description = Putative ovule protein, PFAM = PF02201;PF03126)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold35835_7320-15045' '(at1g67370 : 580.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 167.0) no description available & (gnl|cdd|85949 : 136.0) no description available & (reliability: 1160.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold36684_993-13270' '(at5g15020 : 1204.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 219.0) no description available & (gnl|cdd|35161 : 177.0) no description available & (reliability: 2408.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF08295;PF02671;PF02671;PF02671;PF16879)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold37158_13639-16900' '(at5g54930 : 110.0) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold37316_10337-16977' '(at2g33620 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 151.0) no description available & (reliability: 350.0) & (original description: Putative AHL8, Description = AT-hook motif nuclear-localized protein 8, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold38691_13246-19449' '(at4g12080 : 247.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 494.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold41312_7407-18611' '(at5g47430 : 535.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT4G17410.1). & (gnl|cdd|35535 : 216.0) no description available & (gnl|cdd|34819 : 142.0) no description available & (reliability: 1070.0) & (original description: Putative dl4735w, Description = Putative uncharacterized protein AT4g17400, PFAM = PF08783;PF13696)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold44113_7055-11037' '(at1g66170 : 695.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 183.0) no description available & (reliability: 1390.0) & (original description: Putative MMD1, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold44718_5224-17293' '(at3g24870 : 733.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1466.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold47346_1-11700' '(at3g45630 : 658.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 256.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 1306.0) & (original description: Putative cnot4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold50003_8459-14067' '(at5g05140 : 288.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 85.3) no description available & (reliability: 576.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold53746_11898-18301' '(at4g12080 : 244.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 142.0) no description available & (reliability: 488.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold54479_3759-11558' '(at1g30680 : 276.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g30660, Description = Primase homolog protein, PFAM = PF13662)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold56115_2-6727' '(at4g12080 : 241.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 150.0) no description available & (reliability: 482.0) & (original description: Putative AHL2, Description = AT-hook motif nuclear-localized protein 2, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold57191_330-10776' '(at2g33620 : 151.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 302.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold60037_1-5593' '(p93788|remo_soltu : 103.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 97.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold62389_1-8463' '(at4g11560 : 520.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 265.0) no description available & (gnl|cdd|72853 : 225.0) no description available & (reliability: 1040.0) & (original description: Putative Sb04g013016, Description = Putative uncharacterized protein Sb04g013016, PFAM = PF07500;PF01426)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold62389_2317-7495' '(at4g11560 : 344.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 176.0) no description available & (gnl|cdd|72853 : 167.0) no description available & (reliability: 688.0) & (original description: Putative MTR_6g464540, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500;PF01426)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold63256_696-8801' '(at2g33490 : 327.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.1); Has 1387 Blast hits to 1097 proteins in 177 species: Archae - 4; Bacteria - 37; Metazoa - 593; Fungi - 281; Plants - 163; Viruses - 19; Other Eukaryotes - 290 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At2g33490, Description = Uncharacterized protein At2g33490, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold63437_4727-9271' '(at2g41870 : 149.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 107.0) no description available & (reliability: 298.0) & (original description: Putative PGSC0003DMG400027238, Description = Remorin-like protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold65690_1-3770' '(at4g21705 : 507.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF01535;PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold67273_2803-8692' '(at4g12540 : 164.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold67480_3631-9738' '(at1g67370 : 385.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold69746_7561-9361' '(at5g60410 : 127.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold71014_1-8911' '(at5g46640 : 179.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 358.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold73858_49-7415' '(at4g09980 : 556.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 465.0) no description available & (gnl|cdd|68631 : 184.0) no description available & (q2hvd6|mta70_medtr : 121.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1112.0) & (original description: Putative Mettl14, Description = N6-adenosine-methyltransferase subunit METTL14, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold74083_4372-8383' '(at1g68730 : 101.0) Zim17-type zinc finger protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT5G27280.1); Has 375 Blast hits to 375 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 113; Plants - 110; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative zr1, Description = Zinc ribbon 1, PFAM = PF05180)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold86399_7049-9498' '(at4g11560 : 105.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At4g11560, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold88493_1-4516' '(at5g15020 : 159.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 125.0) no description available & (gnl|cdd|35161 : 90.1) no description available & (reliability: 318.0) & (original description: Putative SIN3, Description = Paired amphipathic helix repeat-containing protein, PFAM = PF02671)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold124461_1-1921' '(at3g22220 : 262.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 150.0) no description available & (reliability: 524.0) & (original description: Putative BnaA05g17040D, Description = Putative ovule protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold389_681697-691191' '(at1g19340 : 340.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 118.0) no description available & (reliability: 680.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold512_144073-149443' '(at4g39680 : 199.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 112.0) no description available & (reliability: 398.0) & (original description: Putative At4g39680, Description = Predicted protein, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold543_254124-545987' '(at2g41870 : 149.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 108.0) no description available & (reliability: 298.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold570_374112-388285' '(at4g09980 : 656.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 376.0) no description available & (gnl|cdd|68631 : 142.0) no description available & (q2hvd6|mta70_medtr : 92.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1312.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold599_667012-669986' '(at2g45430 : 199.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 366.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold766_252308-269357' '(at3g24870 : 947.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1894.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold958_13053-18791' '(at1g56110 : 729.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 663.0) no description available & (gnl|cdd|31687 : 327.0) no description available & (reliability: 1458.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1025_323134-332580' '(at5g46640 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 350.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1293_48480-53658' '(at1g15910 : 494.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 166.0) no description available & (reliability: 988.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03469;PF03470)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1298_293076-299688' '(at3g48670 : 482.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 160.0) no description available & (reliability: 964.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03468;PF03469)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1315_24762-27708' '(at2g45430 : 218.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 141.0) no description available & (reliability: 408.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1341_19045-28121' '(at3g48670 : 421.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 165.0) no description available & (reliability: 842.0) & (original description: Putative FDM3, Description = Putative domain XH, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1603_113488-117442' '(at2g41870 : 146.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 103.0) no description available & (reliability: 292.0) & (original description: Putative LOC100273279, Description = Remorin-like protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1666_60814-66176' '(at1g10170 : 1202.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 710.0) no description available & (reliability: 2404.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1699_130617-139963' '(at1g51540 : 511.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 84.7) no description available & (reliability: 1022.0) & (original description: Putative At1g51540, Description = Kelch-like protein 20, PFAM = PF13964;PF01344)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1730_404734-408682' '(at4g15020 : 327.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 141.0) no description available & (reliability: 622.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937;PF02892;PF05699)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2394_234981-242347' '(at4g09980 : 556.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 465.0) no description available & (gnl|cdd|68631 : 184.0) no description available & (q2hvd6|mta70_medtr : 121.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1112.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2409_316936-320484' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 232.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2551_171298-177957' '(at2g33620 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2681_184988-219173' '(at3g24870 : 972.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1944.0) & (original description: Putative Os08g0177300, Description = Putative ovule protein, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2888_74348-85880' '(at1g34360 : 143.0) translation initiation factor 3 (IF-3) family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1); Has 45300 Blast hits to 30219 proteins in 3054 species: Archae - 48; Bacteria - 10638; Metazoa - 13046; Fungi - 7368; Plants - 4879; Viruses - 1090; Other Eukaryotes - 8231 (source: NCBI BLink). & (gnl|cdd|80458 : 139.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400006166, Description = Translation initiation factor IF-3, PFAM = PF00707;PF05198)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3092_208452-213426' '(at1g77860 : 285.0) mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane Protein; KOMPEITO (KOM); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 4976 Blast hits to 4975 proteins in 1564 species: Archae - 94; Bacteria - 3058; Metazoa - 485; Fungi - 120; Plants - 306; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|37500 : 212.0) no description available & (gnl|cdd|85618 : 111.0) no description available & (reliability: 570.0) & (original description: Putative KOM, Description = RHOMBOID-like protein 8, PFAM = PF01694)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3098_3193-16799' '(at4g02560 : 455.0) Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.; luminidependens (LD); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287). & (reliability: 910.0) & (original description: Putative LD, Description = Luminidependens, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3101_223203-227055' '(at1g66170 : 348.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 129.0) no description available & (reliability: 696.0) & (original description: Putative DUET, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold4287_59349-64005' '(gnl|cdd|68508 : 98.0) no description available & (at3g17450 : 88.6) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400017078, Description = Putative ovule protein, PFAM = PF04937;PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold5410_115401-128250' '(at1g72650 : 283.0) Arabidopsis thaliana myb family transcription factor (At1g72650); TRF-like 6 (TRFL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 3 (TAIR:AT1G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative MYB30, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold5595_128305-130658' '(at3g58470 : 105.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 92.0) no description available & (reliability: 210.0) & (original description: Putative ATRBL15, Description = Protein-lysine N-methyltransferase B456_006G146100, PFAM = PF10237)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6271_102552-106963' '(at5g07030 : 486.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (reliability: 972.0) & (original description: Putative BnaA09g34280D, Description = BnaA09g34280D protein, PFAM = PF14543;PF14541)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6770_3765-14314' '(at1g67370 : 582.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 179.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1164.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6770_5398-14426' '(at1g67370 : 441.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 139.0) no description available & (reliability: 882.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6962_39480-45570' '(at4g11400 : 236.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT2G46040.1); Has 254 Blast hits to 233 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 4; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative ARID2, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold8326_1400-5184' '(at4g15020 : 285.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 568.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937;PF02892)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold9215_1117-5869' '(at1g02370 : 265.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G01990.1); Has 6320 Blast hits to 3912 proteins in 155 species: Archae - 0; Bacteria - 6; Metazoa - 44; Fungi - 46; Plants - 6080; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 288.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold18861_1-1543' '(at1g43260 : 140.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 140.0) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold23577_1-1293' '(gnl|cdd|68508 : 117.0) no description available & (at3g17450 : 96.7) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold44688_1-789' '(at3g17450 : 163.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 145.0) no description available & (reliability: 326.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00000719ctg000_8788-15084' '(at3g45830 : 902.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|37138 : 631.0) no description available & (reliability: 1804.0) & (original description: Putative v1g2855, Description = Predicted protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00001414ctg005_5135-11808' '(at2g45820 : 103.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 99.4) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 206.0) & (original description: Putative BnaAnng30100D, Description = BnaAnng30100D protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00001833ctg007_1016-7694' '(at4g28830 : 270.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 3586 Blast hits to 3586 proteins in 1312 species: Archae - 213; Bacteria - 2970; Metazoa - 118; Fungi - 5; Plants - 52; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|38630 : 194.0) no description available & (gnl|cdd|32444 : 158.0) no description available & (reliability: 540.0) & (original description: Putative Mettl5, Description = Methyltransferase-like protein 5, PFAM = PF06325)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00002763ctg000_1755-5002' '(at2g45430 : 193.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 368.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00003968ctg000_20572-24425' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 121.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004219ctg004_1-2510' '(at3g51120 : 112.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF13771)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004221ctg002_4058-8109' '(at3g49410 : 425.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT5G24450.1); Has 2810 Blast hits to 2245 proteins in 293 species: Archae - 21; Bacteria - 231; Metazoa - 753; Fungi - 513; Plants - 191; Viruses - 81; Other Eukaryotes - 1020 (source: NCBI BLink). & (gnl|cdd|37684 : 241.0) no description available & (reliability: 850.0) & (original description: Putative BnaAnng17860D, Description = BnaAnng17860D protein, PFAM = PF09734)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004570ctg005_371-4140' '(at2g41870 : 131.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 106.0) no description available & (reliability: 262.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004921ctg004_183-5527' '(at1g51540 : 505.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 96.6) no description available & (reliability: 1010.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF01344;PF13418)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005251ctg016_8461-12440' '(at1g60770 : 605.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 19797 Blast hits to 7926 proteins in 238 species: Archae - 2; Bacteria - 46; Metazoa - 98; Fungi - 130; Plants - 18960; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative At1g60770, Description = Pentatricopeptide repeat-containing protein At1g60770, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005373ctg021_497-5178' '(at4g12080 : 88.6) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative AHP1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005813ctg007_12307-15402' '(at5g05660 : 125.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative EBI, Description = NF-X1-type zinc finger protein NFXL2, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005969ctg010_13456-18481' '(at1g56110 : 387.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 320.0) no description available & (gnl|cdd|31687 : 112.0) no description available & (reliability: 774.0) & (original description: Putative sik1, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00006246ctg009_1018-4631' '(at5g54930 : 89.4) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00007310ctg007_436-5017' '(at2g20710 : 292.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative At2g20710, Description = Pentatricopeptide repeat-containing protein At2g20710, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00008448ctg007_1-6246' '(at3g04590 : 124.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT5G28590.1); Has 3387 Blast hits to 3069 proteins in 223 species: Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298; Plants - 799; Viruses - 15; Other Eukaryotes - 520 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative AHP1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010366ctg001_278-5274' '(at4g39680 : 271.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 133.0) no description available & (reliability: 542.0) & (original description: Putative At4g39680, Description = Putative uncharacterized protein AT4g39680, PFAM = PF02037;PF16294)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010724ctg022_26597-31176' '(at1g02150 : 626.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative At1g02150, Description = Pentatricopeptide repeat-containing protein At1g02150, PFAM = PF01535;PF01535;PF01535;PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010953ctg006_4602-7683' '(at3g49410 : 134.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT5G24450.1); Has 2810 Blast hits to 2245 proteins in 293 species: Archae - 21; Bacteria - 231; Metazoa - 753; Fungi - 513; Plants - 191; Viruses - 81; Other Eukaryotes - 1020 (source: NCBI BLink). & (gnl|cdd|37684 : 92.8) no description available & (reliability: 268.0) & (original description: Putative LOC100192729, Description = , PFAM = PF09734)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00011419ctg013_3747-9900' '(at5g11430 : 405.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 244.0) no description available & (gnl|cdd|87289 : 118.0) no description available & (reliability: 810.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07744;PF07500)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00011798ctg006_649-7564' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00013894ctg001_9655-12345' '(at5g55390 : 176.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 352.0) & (original description: Putative EDM2, Description = DNA (Cytosine-5)-methyltransferase 1, replication foci domain-containing protein, PFAM = PF12047)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00014692ctg019_1432-4149' '(o82797|pcna_tobac : 504.0) Proliferating cell nuclear antigen (PCNA) - Nicotiana tabacum (Common tobacco) & (at2g29570 : 470.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|36849 : 402.0) no description available & (gnl|cdd|48351 : 265.0) no description available & (reliability: 940.0) & (original description: Putative pcn, Description = Proliferating cell nuclear antigen, PFAM = PF00705;PF02747)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00014848ctg019_9992-19845' '(at5g22760 : 444.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 888.0) & (original description: Putative DDP1, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015093ctg001_1-5202' '(at4g39680 : 221.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 106.0) no description available & (reliability: 442.0) & (original description: Putative TCM_001192, Description = SAP domain-containing protein isoform 1, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015325ctg005_13283-15827' '(at1g43260 : 105.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 99.0) no description available & (reliability: 204.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015723ctg005_1-2349' '(at4g30200 : 171.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 324.0) & (original description: Putative VEL1, Description = Protein VERNALIZATION 5, PFAM = PF07227)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019033ctg016_7433-16623' '(at5g55600 : 429.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 147.0) no description available & (reliability: 858.0) & (original description: Putative BnaA03g11300D, Description = BnaA03g11300D protein, PFAM = PF05641;PF01426)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019404ctg000_1120-7550' '(at5g43500 : 291.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36016 : 189.0) no description available & (reliability: 582.0) & (original description: Putative ACT, Description = Actin-related protein 9, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019404ctg008_1-8607' '(at5g43500 : 401.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36016 : 207.0) no description available & (gnl|cdd|28896 : 88.4) no description available & (reliability: 802.0) & (original description: Putative ARP, Description = ARP protein, PFAM = PF00022)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00020173ctg002_1-756' '(gnl|cdd|68508 : 135.0) no description available & (at3g17450 : 134.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00021130ctg008_8365-13550' '(at4g15020 : 682.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 200.0) no description available & (reliability: 1330.0) & (original description: Putative dl3551w, Description = Putative uncharacterized protein AT4g15020, PFAM = PF05699;PF04937;PF02892)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023097ctg001_9372-12416' '(at4g09980 : 163.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 112.0) no description available & (reliability: 326.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023242ctg005_9008-11824' '(gnl|cdd|68508 : 147.0) no description available & (at1g43260 : 120.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023949ctg007_3238-16088' '(at5g15020 : 1065.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 221.0) no description available & (gnl|cdd|35161 : 154.0) no description available & (reliability: 2130.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF16879;PF02671;PF02671;PF02671)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00025151ctg005_14944-26665' '(at5g22760 : 739.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 380.0) no description available & (reliability: 1478.0) & (original description: Putative At5g22760, Description = Putative ovule protein, PFAM = PF15612;PF02791)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00026224ctg024_699-10992' '(at3g24880 : 763.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24870.1); Has 17312 Blast hits to 12172 proteins in 594 species: Archae - 4; Bacteria - 677; Metazoa - 8001; Fungi - 2909; Plants - 1838; Viruses - 51; Other Eukaryotes - 3832 (source: NCBI BLink). & (reliability: 1496.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF13921;PF07529)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00027615ctg000_3368-10981' '(at1g67370 : 595.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 183.0) no description available & (gnl|cdd|85949 : 144.0) no description available & (reliability: 1190.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00027918ctg002_1-5419' '(at4g11560 : 360.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 187.0) no description available & (gnl|cdd|72853 : 167.0) no description available & (reliability: 720.0) & (original description: Putative At4g11560, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500;PF01426)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029122ctg014_1-611' '(gnl|cdd|68508 : 128.0) no description available & (at3g17450 : 124.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaC09g31880D, Description = BnaC09g31880D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029454ctg014_8303-10758' '(at1g75560 : 171.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative GIS2, Description = DNA-binding protein HEXBP, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029945ctg008_2542-8002' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 608.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031438ctg001_3310-11759' '(at1g67370 : 614.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 179.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1228.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031438ctg001_5281-11871' '(at1g67370 : 452.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 139.0) no description available & (reliability: 904.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031570ctg001_962-3923' '(at5g09450 : 339.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At5g09450, Description = Pentatricopeptide repeat-containing protein At5g09450, mitochondrial, PFAM = PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00033405ctg008_1-2450' '(at1g23230 : 145.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 93.2) no description available & (reliability: 290.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00034335ctg000_12603-15702' '(at5g49700 : 156.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 120.0) no description available & (reliability: 312.0) & (original description: Putative AHL17, Description = AT-hook motif nuclear-localized protein 17, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00036798ctg002_682-3627' '(at2g41870 : 124.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MTR_1g052560, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00041452ctg000_6545-18795' '(at3g45630 : 351.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 221.0) no description available & (gnl|cdd|34774 : 218.0) no description available & (reliability: 686.0) & (original description: Putative NOT4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00043892ctg004_2160-6967' '(at1g19340 : 386.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 148.0) no description available & (gnl|cdd|68631 : 108.0) no description available & (reliability: 772.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00047047ctg000_9497-15956' '(at1g04950 : 584.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 450.0) no description available & (gnl|cdd|34698 : 359.0) no description available & (reliability: 1168.0) & (original description: Putative TAF6, Description = Transcription initiation factor TFIID subunit 6, PFAM = PF07571;PF02969)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00047859ctg000_9129-12569' '(at1g73230 : 167.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 334.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00048849ctg003_1-11259' '(at5g18230 : 298.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|86527 : 121.0) no description available & (gnl|cdd|37361 : 117.0) no description available & (reliability: 596.0) & (original description: Putative NOT3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00054766ctg000_4911-16133' '(at5g60410 : 253.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02037;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00055004ctg000_7880-12332' '(at5g27460 : 430.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative At5g27460, Description = Pentatricopeptide repeat-containing protein At5g27460, PFAM = PF13812;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00056293ctg002_1-6525' '(at2g33620 : 174.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 348.0) & (original description: Putative AHL10, Description = AT-hook motif nuclear-localized protein 10, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00091_121911-125738' '(at3g05675 : 88.2) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative glysoja_010289, Description = BTB/POZ domain-containing protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00158_400662-407285' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00163_316417-322504' '(at4g12050 : 130.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 260.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00168_353470-356870' '(at4g17410 : 250.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT5G47430.1). & (gnl|cdd|35535 : 139.0) no description available & (gnl|cdd|34819 : 124.0) no description available & (reliability: 496.0) & (original description: Putative dl4735w, Description = DWNN domain, A CCHC-type zinc finger protein, PFAM = PF13696;PF08783)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00317_647810-651998' '(at4g02820 : 592.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 15018 Blast hits to 7498 proteins in 232 species: Archae - 0; Bacteria - 55; Metazoa - 87; Fungi - 92; Plants - 14442; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 1184.0) & (original description: Putative At4g02820, Description = Pentatricopeptide repeat-containing protein At4g02820, mitochondrial, PFAM = PF01535;PF01535;PF17177;PF13041)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00321_475356-492160' '(at5g55390 : 677.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 1354.0) & (original description: Putative ELP1, Description = PHD finger-containing protein, PFAM = PF12047)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00327_36637-40498' '(at5g24450 : 452.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT3G49410.1); Has 680 Blast hits to 642 proteins in 201 species: Archae - 0; Bacteria - 19; Metazoa - 202; Fungi - 159; Plants - 80; Viruses - 10; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|37684 : 243.0) no description available & (reliability: 904.0) & (original description: Putative BnaAnng17860D, Description = BnaAnng17860D protein, PFAM = PF09734)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00358_63083-81575' '(at1g77250 : 309.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative BnaA07g33420D, Description = BnaA07g33420D protein, PFAM = PF00628;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00358_77918-82012' '(at1g77250 : 262.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative PGSC0003DMG400018006, Description = PHD finger family protein, PFAM = PF00628;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00381_127910-132477' '(gnl|cdd|86345 : 122.0) no description available & (at2g33620 : 115.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TIDP2696, Description = AT-hook protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00389_128156-133346' '(at4g15020 : 712.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 202.0) no description available & (reliability: 1382.0) & (original description: Putative dl3551w, Description = Putative uncharacterized protein AT4g15020, PFAM = PF05699;PF02892;PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00397_252141-290047' '(at1g02080 : 2654.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (gnl|cdd|86522 : 549.0) no description available & (gnl|cdd|37042 : 513.0) no description available & (reliability: 5308.0) & (original description: Putative cnot1, Description = CCR4-NOT transcription complex subunit 1, PFAM = PF16415;PF04054;PF12842;PF16418;PF16417)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00597_47919-52928' '(gnl|cdd|37778 : 180.0) no description available & (at3g07030 : 170.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85767 : 82.9) no description available & (reliability: 310.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00683_472181-478392' '(at1g04950 : 593.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 455.0) no description available & (gnl|cdd|34698 : 362.0) no description available & (reliability: 1186.0) & (original description: Putative TAF6, Description = Transcription initiation factor TFIID subunit 6, PFAM = PF02969;PF07571)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00735_502868-506813' '(at2g41870 : 123.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 103.0) no description available & (reliability: 246.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00777_301716-308418' '(at5g11430 : 398.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 238.0) no description available & (gnl|cdd|87289 : 121.0) no description available & (reliability: 796.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07500;PF07744)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00793_688709-708024' '(at1g02370 : 434.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G01990.1); Has 6320 Blast hits to 3912 proteins in 155 species: Archae - 0; Bacteria - 6; Metazoa - 44; Fungi - 46; Plants - 6080; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative At1g02370, Description = Os01g0301000 protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00812_337842-351300' '(at4g09980 : 756.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 476.0) no description available & (gnl|cdd|68631 : 181.0) no description available & (q2hvd6|mta70_medtr : 125.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1512.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00867_116903-121346' '(at5g07030 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 194.0) no description available & (reliability: 964.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00883_675306-679713' '(at1g75560 : 220.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative pco105342b, Description = DNA-binding protein HEXBP, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00929_292341-301200' '(at1g19340 : 417.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 151.0) no description available & (gnl|cdd|68631 : 104.0) no description available & (reliability: 834.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00959_140-3275' '(at1g10200 : 298.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 246.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 155.0) no description available & (reliability: 596.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00962_63782-94581' '(at1g77800 : 541.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (gnl|cdd|36172 : 258.0) no description available & (gnl|cdd|34742 : 130.0) no description available & (reliability: 1082.0) & (original description: Putative jade1, Description = Protein Jade-1, PFAM = PF13831;PF13831;PF13832;PF13832)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00971_148333-154947' '(at3g52170 : 108.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G58210.4). & (reliability: 216.0) & (original description: Putative PEND, Description = Plastid DNA-binding protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00974_230956-244761' '(at1g13790 : 320.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G48670.2); Has 49019 Blast hits to 30980 proteins in 1872 species: Archae - 565; Bacteria - 6337; Metazoa - 23607; Fungi - 3326; Plants - 1659; Viruses - 198; Other Eukaryotes - 13327 (source: NCBI BLink). & (gnl|cdd|67105 : 130.0) no description available & (reliability: 640.0) & (original description: Putative x1, Description = XH/XS domain protein, PFAM = PF03469;PF03468)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01018_370219-405406' '(at3g24870 : 777.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1554.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01051_1021658-1028071' '(at4g12080 : 246.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 140.0) no description available & (reliability: 492.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01051_1098740-1101962' '(at2g45430 : 203.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 394.0) & (original description: Putative Os02g0448000, Description = Os02g0448000 protein, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01061_410482-444201' '(at1g30680 : 323.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative PEO1, Description = DNA helicase, DnaB-like, C-terminal, PFAM = PF13662)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01061_933458-948584' '(at2g19260 : 170.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, CW-type (InterPro:IPR011124), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1801 Blast hits to 1744 proteins in 174 species: Archae - 2; Bacteria - 8; Metazoa - 1171; Fungi - 140; Plants - 342; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative Sb10g026366, Description = Putative uncharacterized protein Sb10g026366, PFAM = PF00628;PF01448)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01073_172651-176865' '(at1g67590 : 226.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 109.0) no description available & (reliability: 452.0) & (original description: Putative BnaC06g28630D, Description = BnaC06g28630D protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01180_10448-16720' '(at4g12080 : 217.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 138.0) no description available & (reliability: 434.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01203_129711-140760' '(at1g29220 : 182.0) transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479). & (gnl|cdd|87378 : 104.0) no description available & (reliability: 364.0) & (original description: Putative Ccrd_020963, Description = HCNGP-like protein, PFAM = PF07818)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01257_43745-53423' '(at2g46040 : 229.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01300_2795-15434' '(at5g15020 : 1061.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 224.0) no description available & (gnl|cdd|35161 : 157.0) no description available & (reliability: 2122.0) & (original description: Putative SNL1, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF16879;PF02671;PF02671;PF02671)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01301_425-7617' '(at1g80270 : 557.0) PENTATRICOPEPTIDE REPEAT 596 (PPR596); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G15480.1); Has 12069 Blast hits to 5943 proteins in 220 species: Archae - 0; Bacteria - 13; Metazoa - 132; Fungi - 119; Plants - 11568; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink). & (reliability: 1114.0) & (original description: Putative At1g80270, Description = Pentatricopeptide repeat-containing protein At1g80270, mitochondrial, PFAM = PF13812;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01326_969952-973979' '(at3g28720 : 758.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 1516.0) & (original description: Putative Sb10g022840, Description = Putative uncharacterized protein Sb10g022840, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01402_138149-149366' '(at5g15020 : 1210.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 217.0) no description available & (gnl|cdd|35161 : 178.0) no description available & (reliability: 2420.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF02671;PF02671;PF02671;PF08295;PF16879)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01463_728220-732461' '(at1g10200 : 243.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 231.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 140.0) no description available & (reliability: 486.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01526_798210-805456' '(at5g46640 : 151.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 302.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01557_34096-46870' '(at5g22760 : 724.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 380.0) no description available & (reliability: 1448.0) & (original description: Putative At5g22760, Description = Putative ovule protein, PFAM = PF00628;PF02791;PF15612)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01655_297992-302708' '(at2g45820 : 96.3) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 92.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 192.6) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01697_1879175-1890178' '(at5g46640 : 172.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 344.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01718_229538-242036' '(gnl|cdd|80458 : 102.0) no description available & (at1g34360 : 96.7) translation initiation factor 3 (IF-3) family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1); Has 45300 Blast hits to 30219 proteins in 3054 species: Archae - 48; Bacteria - 10638; Metazoa - 13046; Fungi - 7368; Plants - 4879; Viruses - 1090; Other Eukaryotes - 8231 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative infC, Description = Translation initiation factor if-3, putative, PFAM = PF05198)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01731_13836-16495' '(at4g22810 : 182.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86345 : 129.0) no description available & (reliability: 364.0) & (original description: Putative AHL18, Description = AT-hook motif nuclear-localized protein 18, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01752_903008-909480' '(at1g04950 : 587.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 446.0) no description available & (gnl|cdd|34698 : 345.0) no description available & (reliability: 1174.0) & (original description: Putative pco097658, Description = Putative TATA binding protein family protein, PFAM = PF07571;PF02969)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01795_102269-119728' '(at3g04590 : 169.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT5G28590.1); Has 3387 Blast hits to 3069 proteins in 223 species: Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298; Plants - 799; Viruses - 15; Other Eukaryotes - 520 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 338.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01798_821345-824487' '(at1g73230 : 171.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 152.0) no description available & (reliability: 342.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01818_236889-246404' '(at3g45630 : 361.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 220.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 700.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01824_155806-161437' '(p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 95.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01852_494414-498980' '(at1g75560 : 223.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative GIS2, Description = Zinc finger protein GIS2, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02066_145401-154219' '(at3g48670 : 473.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 164.0) no description available & (reliability: 946.0) & (original description: Putative At5g59390, Description = Transcription regulator-like, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02210_1184563-1193270' '(at1g80270 : 565.0) PENTATRICOPEPTIDE REPEAT 596 (PPR596); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G15480.1); Has 12069 Blast hits to 5943 proteins in 220 species: Archae - 0; Bacteria - 13; Metazoa - 132; Fungi - 119; Plants - 11568; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink). & (reliability: 1130.0) & (original description: Putative At1g80270, Description = Pentatricopeptide repeat-containing protein At1g80270, mitochondrial, PFAM = PF13812;PF17177)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02221_96908-108865' '(at5g05660 : 876.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (gnl|cdd|37163 : 442.0) no description available & (reliability: 1752.0) & (original description: Putative NFXL2, Description = NF-X1-type zinc finger protein NFXL2, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02235_9923-64451' '(at5g18230 : 818.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 318.0) no description available & (gnl|cdd|86527 : 315.0) no description available & (reliability: 1636.0) & (original description: Putative cnot3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065;PF04153)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02237_240443-247291' '(at1g10200 : 253.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 238.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 139.0) no description available & (reliability: 506.0) & (original description: Putative SF3, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02323_322605-328025' '(at5g09450 : 409.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative At5g09450, Description = Pentatricopeptide repeat-containing protein At5g09450, mitochondrial, PFAM = PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02325_158386-162474' '(at5g27460 : 452.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative At5g27460, Description = Pentatricopeptide repeat-containing protein At5g27460, PFAM = PF01535;PF01535;PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02451_1097377-1109956' '(at3g48670 : 545.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 162.0) no description available & (reliability: 1090.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03470;PF03468;PF03469)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02463_125229-131004' '(at4g21705 : 401.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02494_1221353-1229606' '(at4g25320 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1); Has 750 Blast hits to 746 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 318.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02508_1048858-1055367' '(at4g12540 : 160.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02552_318133-331243' '(gnl|cdd|37778 : 186.0) no description available & (at1g76010 : 176.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 83.7) no description available & (reliability: 352.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02606_629841-635257' '(at4g07950 : 105.0) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|38117 : 97.7) no description available & (reliability: 194.2) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02652_270899-277530' '(at4g12080 : 245.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 490.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02668_42980-46332' '(at3g22220 : 250.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 153.0) no description available & (reliability: 500.0) & (original description: Putative Sb08g005613, Description = Putative uncharacterized protein Sb08g005613, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02731_410135-419792' '(at5g46640 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02755_151511-154245' '(at5g49700 : 177.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 106.0) no description available & (reliability: 354.0) & (original description: Putative AHL28, Description = AT-hook motif nuclear-localized protein 28, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02816_1694590-1697564' '(at2g45430 : 195.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 360.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02922_326174-335921' '(at3g05210 : 421.0) encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10.; ERCC1; FUNCTIONS IN: 5'-flap endonuclease activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), DNA repair protein rad10 (InterPro:IPR004579), RuvA domain 2-like (InterPro:IPR010994); Has 658 Blast hits to 452 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 166; Fungi - 153; Plants - 44; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38052 : 284.0) no description available & (gnl|cdd|34838 : 125.0) no description available & (reliability: 842.0) & (original description: Putative ERCC1, Description = DNA excision repair protein ERCC-1, PFAM = PF03834)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02996_394721-400246' '(at5g05140 : 263.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 83.0) no description available & (reliability: 526.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03075_70312-75624' '(at3g07030 : 183.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|37778 : 174.0) no description available & (gnl|cdd|85767 : 81.0) no description available & (reliability: 342.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03170_569597-587677' '(at3g24870 : 961.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1922.0) & (original description: Putative Os08g0177300, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03224_587171-592797' '(at1g15910 : 537.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 163.0) no description available & (reliability: 1074.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03470;PF03469)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03226_50114-53486' '(at2g45430 : 221.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 132.0) no description available & (reliability: 426.0) & (original description: Putative AHL24, Description = AT-hook motif nuclear-localized protein 24, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03264_470340-483918' '(at3g08020 : 670.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G52100.1); Has 2616 Blast hits to 2466 proteins in 178 species: Archae - 0; Bacteria - 13; Metazoa - 2009; Fungi - 82; Plants - 239; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|39644 : 376.0) no description available & (reliability: 1340.0) & (original description: Putative Os12g0527800, Description = Os12g0527800 protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03321_339506-342555' '(at3g17450 : 165.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 330.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03370_790969-796181' '(at5g05140 : 292.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 84.1) no description available & (reliability: 584.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03374_696302-701092' '(at4g12080 : 231.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 143.0) no description available & (reliability: 462.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03374_871204-879392' '(at1g63470 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 318.0) & (original description: Putative BnaCnng43040D, Description = BnaCnng43040D protein, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03377_236350-251984' '(at2g36740 : 280.0) SWC2; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272), YL1 nuclear (InterPro:IPR008895); Has 4932 Blast hits to 3253 proteins in 360 species: Archae - 2; Bacteria - 230; Metazoa - 1594; Fungi - 576; Plants - 159; Viruses - 97; Other Eukaryotes - 2274 (source: NCBI BLink). & (gnl|cdd|38108 : 172.0) no description available & (gnl|cdd|69297 : 111.0) no description available & (reliability: 560.0) & (original description: Putative SWC2, Description = SWR1 complex subunit 2, PFAM = PF08265;PF05764)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03417_768-30285' '(at5g10940 : 934.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 707.0) no description available & (reliability: 1868.0) & (original description: Putative At5g10940, Description = Putative uncharacterized protein At5g10940, PFAM = PF00400;PF00400)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03424_116173-121867' '(at4g12080 : 87.8) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative AHP1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03449_320717-324441' '(at1g10200 : 306.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 244.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 162.0) no description available & (reliability: 612.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03565_869750-874938' '(at1g60770 : 625.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 19797 Blast hits to 7926 proteins in 238 species: Archae - 2; Bacteria - 46; Metazoa - 98; Fungi - 130; Plants - 18960; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative At1g60770, Description = Pentatricopeptide repeat-containing protein At1g60770, PFAM = PF01535;PF01535;PF01535;PF13812;PF13041)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03648_525389-533654' '(at2g47790 : 480.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink). & (gnl|cdd|36402 : 305.0) no description available & (reliability: 960.0) & (original description: Putative At2g47790, Description = At2g47790/F17A22.18, PFAM = PF00400)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03708_359407-362523' '(at1g17880 : 190.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 360.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03732_627223-632950' '(at2g41350 : 366.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative 37104, Description = AUGMIN subunit 1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03766_1037472-1040929' '(at5g14510 : 224.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G12710.1); Has 1353 Blast hits to 1188 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 195; Plants - 1036; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative RCOM_1064640, Description = Ubiquitin-protein ligase, putative, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03872_230494-234039' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 236.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03872_230497-235555' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 236.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03934_855-10160' '(at1g04020 : 406.0) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (gnl|cdd|39563 : 265.0) no description available & (reliability: 812.0) & (original description: Putative BRCA1, Description = Protein BREAST CANCER SUSCEPTIBILITY 1-like protein, PFAM = PF13771;PF16589;PF00533;PF13445)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03942_288072-294033' '(at4g12540 : 166.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03951_342598-348063' '(at4g12080 : 162.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 324.0) & (original description: Putative AHL7, Description = AT-hook motif nuclear-localized protein 7, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04103_939342-946020' '(at4g28830 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 3586 Blast hits to 3586 proteins in 1312 species: Archae - 213; Bacteria - 2970; Metazoa - 118; Fungi - 5; Plants - 52; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|38630 : 218.0) no description available & (gnl|cdd|32444 : 174.0) no description available & (reliability: 602.0) & (original description: Putative Mettl5, Description = Methyltransferase-like protein 5, PFAM = PF05175)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04182_337703-346149' '(at3g48670 : 544.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 161.0) no description available & (reliability: 1088.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03469;PF03470;PF03468)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04329_19047-39523' '(at1g59453 : 1120.0) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 2240.0) & (original description: Putative , Description = , PFAM = PF04182)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04367_37547-64686' '(at5g55390 : 805.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 1610.0) & (original description: Putative ELP1, Description = DNA (Cytosine-5)-methyltransferase 1, replication foci domain-containing protein, PFAM = PF12047)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04473_1189805-1195042' '(at5g05140 : 273.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 85.7) no description available & (reliability: 546.0) & (original description: Putative BnaA03g55180D, Description = BnaA03g55180D protein, PFAM = PF08711)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04549_958982-973878' '(at5g60410 : 1048.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37380 : 87.1) no description available & (reliability: 2096.0) & (original description: Putative SIZ1, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02891;PF00628;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04596_28848-37576' '(at1g51540 : 529.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (reliability: 1058.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF13418;PF13418)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04663_434164-440547' '(at5g11430 : 394.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 243.0) no description available & (gnl|cdd|87289 : 118.0) no description available & (reliability: 788.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07744;PF07500)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04742_287994-293158' '(at5g19490 : 175.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36872 : 164.0) no description available & (gnl|cdd|34844 : 90.5) no description available & (reliability: 350.0) & (original description: Putative drap1, Description = Dr1-associated corepressor, PFAM = PF00808)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04815_250749-256102' '(at1g56110 : 727.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 662.0) no description available & (gnl|cdd|31687 : 325.0) no description available & (reliability: 1454.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF01798;PF08156)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04878_25356-44726' '(at5g63700 : 357.0) zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Plus-3 domain, subgroup (InterPro:IPR018144), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Plus-3 (InterPro:IPR004343), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain;Plus-3;GYF (TAIR:AT5G08430.1); Has 1143 Blast hits to 955 proteins in 114 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 27; Plants - 204; Viruses - 3; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37157 : 89.4) no description available & (gnl|cdd|47987 : 81.0) no description available & (reliability: 714.0) & (original description: Putative At5g08430, Description = Putative ovule protein, PFAM = PF02201;PF03126)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04899_36649-40523' '(at4g21705 : 504.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1008.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF13812;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04899_108719-128287' '(at2g20710 : 271.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13041)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05025_972938-978789' '(at3g17450 : 936.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 250.0) no description available & (reliability: 1872.0) & (original description: Putative At3g17450, Description = HAT dimerization domain-containing protein, PFAM = PF05699;PF02892;PF02892;PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05047_525127-536797' '(at2g33620 : 148.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 296.0) & (original description: Putative TIDP2696, Description = AT-hook protein 1, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05080_232746-242170' '(at1g50620 : 251.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PGSC0003DMG402022202, Description = PHD finger protein At3g20280, PFAM = PF01426;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05080_233037-242146' '(at1g50620 : 251.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PGSC0003DMG402022202, Description = PHD finger protein At3g20280, PFAM = PF01426;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05118_443029-451331' '(at2g45820 : 93.6) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 91.7) Remorin (pp34) - Solanum tuberosum (Potato) & (gnl|cdd|67381 : 83.5) no description available & (reliability: 187.2) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05118_894884-905994' '(at2g46040 : 221.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05151_408158-413376' '(at1g02150 : 626.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative At1g02150, Description = Pentatricopeptide repeat-containing protein At1g02150, PFAM = PF13812;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05201_83158-87268' '(at1g07590 : 608.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: PENTATRICOPEPTIDE REPEAT 596 (TAIR:AT1G80270.3); Has 14416 Blast hits to 6927 proteins in 166 species: Archae - 0; Bacteria - 10; Metazoa - 31; Fungi - 36; Plants - 14001; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative At1g07590, Description = Pentatricopeptide repeat-containing protein At1g07590, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05226_579989-590435' '(at2g33620 : 157.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 314.0) & (original description: Putative AHL10, Description = AT-hook motif nuclear-localized protein 10, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05321_444418-476235' '(at5g10940 : 934.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 701.0) no description available & (reliability: 1868.0) & (original description: Putative Ccrd_023098, Description = Tetratricopeptide-like helical, PFAM = PF00400;PF12894)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05488_26384-34602' '(at4g09980 : 687.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 456.0) no description available & (gnl|cdd|68631 : 182.0) no description available & (q2hvd6|mta70_medtr : 122.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1374.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05554_509612-514714' '(at1g77860 : 279.0) mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane Protein; KOMPEITO (KOM); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 4976 Blast hits to 4975 proteins in 1564 species: Archae - 94; Bacteria - 3058; Metazoa - 485; Fungi - 120; Plants - 306; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|37500 : 210.0) no description available & (gnl|cdd|85618 : 116.0) no description available & (reliability: 558.0) & (original description: Putative KOM, Description = RHOMBOID-like protein 8, PFAM = PF01694)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05772_84185-89509' '(at5g55600 : 605.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 191.0) no description available & (reliability: 1210.0) & (original description: Putative BnaA10g09770D, Description = BnaA10g09770D protein, PFAM = PF05641;PF01426)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05804_181532-199173' '(at5g11430 : 112.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative TCM_038158, Description = SPOC domain / Transcription elongation factor S-II protein, putative isoform 1, PFAM = PF07744)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05912_265448-270813' '(at1g10170 : 1205.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 710.0) no description available & (reliability: 2410.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06087_1175499-1180019' '(at5g09850 : 234.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72135 : 86.1) no description available & (reliability: 468.0) & (original description: Putative MED26C, Description = Probable mediator of RNA polymerase II transcription subunit 26c, PFAM = PF08711)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06189_407432-410172' '(at5g04110 : 130.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF01448)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06280_112647-115881' '(at3g01320 : 188.0) Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 1 (SNL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 2 (TAIR:AT5G15020.2). & (gnl|cdd|39405 : 142.0) no description available & (gnl|cdd|35161 : 100.0) no description available & (reliability: 372.0) & (original description: Putative SIN3, Description = Paired amphipathic helix repeat-containing protein, PFAM = PF02671)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06291_359143-373457' '(at3g45630 : 368.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 222.0) no description available & (gnl|cdd|34774 : 220.0) no description available & (reliability: 712.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06361_131523-165348' '(at4g39680 : 219.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 121.0) no description available & (reliability: 438.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF02037;PF16294)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06361_323643-329080' '(at4g39680 : 182.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 107.0) no description available & (reliability: 364.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06369_296299-305587' '(at1g63470 : 161.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 119.0) no description available & (reliability: 322.0) & (original description: Putative AHL5, Description = AT-hook motif nuclear-localized protein 5, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06369_553534-563867' '(at4g11560 : 505.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 268.0) no description available & (gnl|cdd|72853 : 222.0) no description available & (reliability: 1010.0) & (original description: Putative At4g11560, Description = Bromo-adjacent homology (BAH) domain-containing protein, PFAM = PF01426;PF07500)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06590_76568-82801' '(at3g45630 : 265.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|34774 : 133.0) no description available & (gnl|cdd|37279 : 131.0) no description available & (reliability: 526.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF14570)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06822_180948-188829' '(at2g33620 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06977_145703-167026' '(at5g61150 : 339.0) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (gnl|cdd|67613 : 165.0) no description available & (gnl|cdd|37639 : 140.0) no description available & (reliability: 678.0) & (original description: Putative VIP4, Description = Protein LEO1 homolog, PFAM = PF04004)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07027_391225-398112' '(at2g33620 : 126.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 252.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07048_134689-143549' '(at1g54390 : 337.0) ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 2 (ING2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G24010.1); Has 1316 Blast hits to 1312 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 731; Fungi - 422; Plants - 94; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37184 : 118.0) no description available & (gnl|cdd|34639 : 95.5) no description available & (reliability: 674.0) & (original description: Putative ING2, Description = PHD finger protein ING2, PFAM = PF00628;PF12998)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07163_25063-39641' '(at1g50620 : 268.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At3g20280, Description = Putative ovule protein, PFAM = PF01426;PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07327_173069-212270' '(at2g46040 : 238.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07522_31035-38694' '(at1g67370 : 604.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 183.0) no description available & (gnl|cdd|85949 : 144.0) no description available & (reliability: 1208.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07672_30650-34297' '(o82797|pcna_tobac : 504.0) Proliferating cell nuclear antigen (PCNA) - Nicotiana tabacum (Common tobacco) & (at2g29570 : 470.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|36849 : 403.0) no description available & (gnl|cdd|48351 : 266.0) no description available & (reliability: 940.0) & (original description: Putative pcn, Description = Proliferating cell nuclear antigen, PFAM = PF02747;PF00705)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07741_450939-465580' '(at1g51540 : 598.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 101.0) no description available & (reliability: 1196.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF01344;PF13418;PF13964)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07751_7083-12045' '(at5g49700 : 184.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 368.0) & (original description: Putative AHL28, Description = AT-hook motif nuclear-localized protein 28, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07766_22130-25446' '(at5g19490 : 149.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36872 : 148.0) no description available & (reliability: 298.0) & (original description: Putative At5g19490, Description = Histone superfamily protein, PFAM = PF00808)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07792_250550-271965' '(at5g60410 : 985.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37380 : 82.1) no description available & (reliability: 1970.0) & (original description: Putative SIZ1, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02891;PF00628;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07792_253035-326289' '(at5g60410 : 526.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative BnaA06g38840D, Description = BnaA06g38840D protein, PFAM = PF00628;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07926_750-6120' '(at4g39680 : 199.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 111.0) no description available & (reliability: 398.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF02037;PF16294)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08026_166531-173171' '(at2g33620 : 164.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 151.0) no description available & (reliability: 328.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08531_119873-125752' '(at1g44770 : 268.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08587_4230-9621' '(at2g45820 : 101.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 101.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08683_8141-16234' '(at1g67370 : 604.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1208.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08683_9899-16346' '(at1g67370 : 442.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 182.0) no description available & (gnl|cdd|85949 : 138.0) no description available & (reliability: 884.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08711_44706-50950' '(at2g46040 : 209.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative PGSC0003DMG400021657, Description = Putative AT-rich interactive domain-containing protein 1-like, PFAM = PF01388)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09109_95829-114232' '(at3g24870 : 926.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1852.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF13921;PF07529)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09109_102005-104583' '(at3g24880 : 119.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24870.1); Has 17312 Blast hits to 12172 proteins in 594 species: Archae - 4; Bacteria - 677; Metazoa - 8001; Fungi - 2909; Plants - 1838; Viruses - 51; Other Eukaryotes - 3832 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09151_278870-286938' '(at2g20710 : 336.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF13812)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09189_173621-176567' '(at2g45430 : 222.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 139.0) no description available & (reliability: 408.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09192_435996-442839' '(at3g24010 : 269.0) ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 1 (ING1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger protein-related (TAIR:AT1G54390.3); Has 1560 Blast hits to 1473 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 910; Fungi - 445; Plants - 120; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37184 : 135.0) no description available & (gnl|cdd|34639 : 114.0) no description available & (reliability: 538.0) & (original description: Putative ING1, Description = PHD finger protein ING1, PFAM = PF12998)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09416_126132-134771' '(at2g45850 : 100.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09416_500585-503749' '(gnl|cdd|68508 : 122.0) no description available & (at3g17450 : 103.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative CHLREDRAFT_153519, Description = Predicted protein, PFAM = PF04937)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09510_50261-63857' '(at4g12750 : 712.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1424.0) & (original description: Putative RLT3, Description = Homeobox-DDT domain protein RLT3, PFAM = PF02791;PF15613;PF15612)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09530_156508-164891' '(gnl|cdd|37778 : 188.0) no description available & (at1g76010 : 173.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 87.9) no description available & (reliability: 346.0) & (original description: Putative ALBA1, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09577_12973-25587' '(at5g15020 : 1217.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 221.0) no description available & (gnl|cdd|35161 : 178.0) no description available & (reliability: 2434.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF02671;PF02671;PF02671;PF16879;PF08295)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09644_28633-35099' '(at1g14410 : 301.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 602.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09684_86300-89100' '(at2g42940 : 257.0) Predicted AT-hook DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 767 Blast hits to 762 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 756; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86345 : 140.0) no description available & (reliability: 514.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09698_207757-210702' '(at2g41870 : 115.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At2g41870, Description = Remorin-like protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10065_102027-106581' '(gnl|cdd|86345 : 121.0) no description available & (at2g33620 : 112.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10224_247304-256907' '(at5g22760 : 608.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 1216.0) & (original description: Putative At5g22760, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10396_105713-119256' '(at5g47430 : 534.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT4G17410.1). & (gnl|cdd|35535 : 212.0) no description available & (gnl|cdd|34819 : 141.0) no description available & (reliability: 1068.0) & (original description: Putative dl4735w, Description = Putative uncharacterized protein AT4g17400, PFAM = PF08783;PF13696)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10465_422882-438227' '(at4g02560 : 453.0) Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.; luminidependens (LD); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287). & (reliability: 906.0) & (original description: Putative LD, Description = Luminidependens, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10920_238101-242034' '(at3g58470 : 194.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 138.0) no description available & (reliability: 388.0) & (original description: Putative XPO4, Description = N(6)-adenine-specific DNA methyltransferase 2, PFAM = PF10237)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10974_71456-78366' '(at4g25320 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1); Has 750 Blast hits to 746 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 350.0) & (original description: Putative AHL2, Description = AT-hook motif nuclear-localized protein 2, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11108_56089-64983' '(at5g12080 : 637.0) mechanosensitive channel of small conductance-like 10 (MSL10); FUNCTIONS IN: mechanically-gated ion channel activity; INVOLVED IN: detection of mechanical stimulus; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 9 (TAIR:AT5G19520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39829 : 562.0) no description available & (gnl|cdd|64773 : 89.5) no description available & (reliability: 1154.0) & (original description: Putative MSL10, Description = Mechanosensitive ion channel protein 10, PFAM = PF00924)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11439_42245-47420' '(at4g39680 : 289.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 132.0) no description available & (reliability: 578.0) & (original description: Putative At4g39680, Description = Putative uncharacterized protein AT4g39680, PFAM = PF16294;PF02037)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11484_141753-149125' '(gnl|cdd|37778 : 186.0) no description available & (at1g76010 : 175.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 82.9) no description available & (reliability: 350.0) & (original description: Putative At1g20220, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11638_14711-17783' '(at5g49700 : 172.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 120.0) no description available & (reliability: 344.0) & (original description: Putative AHL17, Description = AT-hook motif nuclear-localized protein 17, PFAM = PF03479)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11657_200827-213505' '(at3g08020 : 680.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G52100.1); Has 2616 Blast hits to 2466 proteins in 178 species: Archae - 0; Bacteria - 13; Metazoa - 2009; Fungi - 82; Plants - 239; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|39644 : 381.0) no description available & (reliability: 1360.0) & (original description: Putative BnaC01g39530D, Description = BnaC01g39530D protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11684_344479-380261' '(at2g26780 : 2112.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 448 Blast hits to 380 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 190; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|36133 : 1164.0) no description available & (reliability: 4224.0) & (original description: Putative ECM29, Description = Proteasome component ECM29, PFAM = PF13001)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11715_426090-432965' '(at2g20710 : 335.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At2g20710, Description = Pentatricopeptide repeat-containing protein At2g20710, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11738_6334-12079' '(at4g11400 : 234.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT2G46040.1); Has 254 Blast hits to 233 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 4; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG401012197, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11756_126119-139339' '(at3g45630 : 689.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 262.0) no description available & (gnl|cdd|34774 : 215.0) no description available & (reliability: 1354.0) & (original description: Putative CNOT4, Description = CNOT4, PFAM = PF14570;PF00076)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12210_409542-465521' '(at1g23230 : 2160.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 1140.0) no description available & (reliability: 4320.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = PF11573)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12210_448356-463614' '(at1g23230 : 930.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 415.0) no description available & (reliability: 1860.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12289_78329-82115' '(at3g22220 : 264.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 528.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937;PF02892)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12339_213414-223356' '(at3g43240 : 968.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); Has 133 Blast hits to 125 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 9; Plants - 99; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1936.0) & (original description: Putative ARID4, Description = AT-rich interactive domain-containing protein 4, PFAM = PF01388)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12498_14012-18822' '(at1g66170 : 686.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 176.0) no description available & (reliability: 1372.0) & (original description: Putative MMD1, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = PF00628)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12540_52841-56577' '(at5g54930 : 109.0) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12589_187763-193709' '(at3g58470 : 262.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 226.0) no description available & (reliability: 524.0) & (original description: Putative N6AMT2, Description = Protein-lysine N-methyltransferase N6AMT2, PFAM = PF10237)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12967_7929-11901' '(at2g41870 : 155.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 105.0) no description available & (reliability: 310.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13762_319456-322324' '(at5g54930 : 89.7) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13833_135567-141850' '(at1g13790 : 367.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G48670.2); Has 49019 Blast hits to 30980 proteins in 1872 species: Archae - 565; Bacteria - 6337; Metazoa - 23607; Fungi - 3326; Plants - 1659; Viruses - 198; Other Eukaryotes - 13327 (source: NCBI BLink). & (gnl|cdd|67106 : 152.0) no description available & (reliability: 734.0) & (original description: Putative FDM4, Description = Factor of DNA methylation 4, PFAM = PF03468;PF03470;PF03469)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13962_36877-44403' '(at4g18650 : 189.0) transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14880.2); Has 523 Blast hits to 523 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 521; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative BnaA01g09490D, Description = BnaA01g09490D protein, PFAM = PF14144)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13995_268075-272812' '(at1g10200 : 290.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 261.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 163.0) no description available & (reliability: 580.0) & (original description: Putative WLIN2A, Description = LIM domain-containing protein WLIM2a, PFAM = PF00412;PF00412)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf14523_42031-47491' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 608.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf15568_121138-126652' '(at3g48940 : 105.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 206.0) & (original description: Putative REM1, Description = Remorin 1, PFAM = PF03766;PF03763)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf17127_31534-46685' '(p93788|remo_soltu : 109.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 89.7) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf18306_91308-108282' '(at5g55600 : 436.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 146.0) no description available & (reliability: 872.0) & (original description: Putative BnaA03g11300D, Description = BnaA03g11300D protein, PFAM = PF01426;PF05641)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf33214_34015-37430' '(at1g17880 : 171.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 157.0) no description available & (reliability: 338.0) & (original description: Putative btf3, Description = Nascent polypeptide-associated complex subunit beta, PFAM = PF01849)' T
'27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf33515_1838-7675' '(at3g05060 : 711.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT5G27120.1); Has 39712 Blast hits to 18529 proteins in 1244 species: Archae - 275; Bacteria - 3520; Metazoa - 14574; Fungi - 4183; Plants - 1688; Viruses - 262; Other Eukaryotes - 15210 (source: NCBI BLink). & (gnl|cdd|37783 : 591.0) no description available & (gnl|cdd|31687 : 305.0) no description available & (reliability: 1410.0) & (original description: Putative NOP58, Description = Nucleolar protein 58, PFAM = PF01798;PF08156)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold13720_4610-23546' '(at3g63070 : 255.0) Tudor/PWWP/MBT domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT2G48160.1); Has 1177 Blast hits to 1087 proteins in 165 species: Archae - 0; Bacteria - 37; Metazoa - 667; Fungi - 174; Plants - 161; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|47880 : 105.0) no description available & (reliability: 510.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818;PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold27279_2639-17830' '(at5g23150 : 350.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 112.0) no description available & (gnl|cdd|37115 : 86.0) no description available & (reliability: 700.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold38655_3038-7500' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold466_379484-386385' '(at5g02950 : 252.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative KK1_024527, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold4396_31817-65999' '(at2g48150 : 272.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 259.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (q9lef0|gpx4_mescr : 238.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 514.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold7747_24018-46799' '(at3g63070 : 254.0) Tudor/PWWP/MBT domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT2G48160.1); Has 1177 Blast hits to 1087 proteins in 165 species: Archae - 0; Bacteria - 37; Metazoa - 667; Fungi - 174; Plants - 161; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|47880 : 103.0) no description available & (reliability: 508.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00003380ctg007_1834-6388' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00015892ctg000_9445-24946' '(at5g23150 : 351.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 113.0) no description available & (gnl|cdd|37115 : 86.0) no description available & (reliability: 702.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00022943ctg000_6821-10469' '(at5g23150 : 204.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00051891ctg002_1850-6300' '(at3g27860 : 207.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G40340.1); Has 273 Blast hits to 255 proteins in 49 species: Archae - 0; Bacteria - 5; Metazoa - 65; Fungi - 14; Plants - 156; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00011_24739-108517' '(at2g48150 : 269.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 258.0) no description available & (gnl|cdd|48492 : 243.0) no description available & (q9lef0|gpx4_mescr : 234.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 516.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00206_62928-77022' '(at3g21295 : 340.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G51745.1); Has 561 Blast hits to 428 proteins in 108 species: Archae - 2; Bacteria - 226; Metazoa - 60; Fungi - 64; Plants - 94; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00369_194946-203252' '(at5g27650 : 459.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G05430.1); Has 6717 Blast hits to 4764 proteins in 372 species: Archae - 18; Bacteria - 431; Metazoa - 2974; Fungi - 702; Plants - 445; Viruses - 136; Other Eukaryotes - 2011 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative , Description = , PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01289_890495-897540' '(at5g02950 : 245.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative At5g40340, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01722_456961-464084' '(at5g02950 : 250.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative KK1_024527, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01764_60879-68485' '(at3g21295 : 343.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G51745.1); Has 561 Blast hits to 428 proteins in 108 species: Archae - 2; Bacteria - 226; Metazoa - 60; Fungi - 64; Plants - 94; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf03595_305913-326141' '(at5g23150 : 345.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 113.0) no description available & (gnl|cdd|37115 : 93.7) no description available & (reliability: 690.0) & (original description: Putative HULK2, Description = HUA2-like protein 2, PFAM = PF00855;PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf04567_377689-381326' '(at5g23150 : 204.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf05901_253296-261555' '(at5g27650 : 288.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G05430.1); Has 6717 Blast hits to 4764 proteins in 372 species: Archae - 18; Bacteria - 431; Metazoa - 2974; Fungi - 702; Plants - 445; Viruses - 136; Other Eukaryotes - 2011 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative , Description = , PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf06349_241916-246378' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf09242_214843-223808' '(at3g03140 : 184.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G21295.1); Has 426 Blast hits to 278 proteins in 85 species: Archae - 0; Bacteria - 14; Metazoa - 209; Fungi - 70; Plants - 86; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T
'27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf11009_96241-100745' '(at5g02950 : 275.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative , Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold2762_5673-9751' '(at2g22740 : 433.0) Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 6 (SUVH6); FUNCTIONS IN: methyl-CpNpG binding, methyltransferase activity, methyl-CpG binding, methyl-CpNpN binding; INVOLVED IN: histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 251.0) no description available & (gnl|cdd|47772 : 138.0) no description available & (reliability: 866.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF05033;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold8884_37225-44615' '(at1g77300 : 157.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase ASHH2, putative, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold14632_1-3618' '(at1g05830 : 219.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative ATX1, Description = Histone-lysine N-methyltransferase ATX1, PFAM = PF00855;PF05964)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold22009_2160-15562' '(at5g42400 : 309.0) Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.; SET domain protein 25 (SDG25); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 5838 Blast hits to 5683 proteins in 501 species: Archae - 3; Bacteria - 461; Metazoa - 2434; Fungi - 507; Plants - 1016; Viruses - 2; Other Eukaryotes - 1415 (source: NCBI BLink). & (gnl|cdd|36296 : 246.0) no description available & (gnl|cdd|85073 : 140.0) no description available & (q8s4p5|ez2_maize : 104.0) Polycomb protein EZ2 (Enhancer of zeste protein 2) - Zea mays (Maize) & (reliability: 618.0) & (original description: Putative setd1bb, Description = SET domain containing 1Bb, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold31611_734-4845' '(at1g73100 : 556.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 240.0) no description available & (gnl|cdd|47772 : 213.0) no description available & (reliability: 1112.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF00856;PF05033;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold38528_6134-13411' '(at3g04380 : 436.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 872.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856;PF10440)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold42128_12962-18430' '(at5g09790 : 455.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 152.0) no description available & (reliability: 910.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00856;PF00628)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold52982_9800-14124' '(at5g24330 : 446.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36299 : 149.0) no description available & (gnl|cdd|85073 : 83.9) no description available & (reliability: 892.0) & (original description: Putative ATXR6, Description = Histone-lysine N-methyltransferase ATXR6, PFAM = PF00856;PF00628)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold56966_930-9056' '(at1g76710 : 371.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 296.0) no description available & (gnl|cdd|85073 : 131.0) no description available & (q8s4p6|ez1_maize : 98.6) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 742.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold58039_248-8162' '(at3g04380 : 419.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 192.0) no description available & (gnl|cdd|85073 : 115.0) no description available & (reliability: 838.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856;PF10440)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold59010_850-10179' '(at2g17900 : 616.0) Homology Subgroup S-ET - Protein containing an interrupted SET domain.; SET domain group 37 (SDG37); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ATXR2 (TAIR:AT3G21820.1); Has 2797 Blast hits to 2717 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 1313; Fungi - 588; Plants - 382; Viruses - 7; Other Eukaryotes - 507 (source: NCBI BLink). & (gnl|cdd|37295 : 133.0) no description available & (reliability: 1232.0) & (original description: Putative ASHR1, Description = Histone-lysine N-methyltransferase ASHR1, PFAM = PF00856;PF01753)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold64468_641-5934' '(at4g13460 : 766.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 230.0) no description available & (gnl|cdd|47772 : 230.0) no description available & (reliability: 1532.0) & (original description: Putative BnaA04g19330D, Description = BnaA04g19330D protein, PFAM = PF05033;PF02182;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold30_651358-664889' '(at4g15180 : 2077.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 122.0) no description available & (gnl|cdd|47645 : 89.3) no description available & (reliability: 4154.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold491_377352-382228' '(at2g18850 : 125.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (reliability: 250.0) & (original description: Putative glysoja_005790, Description = [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold516_149295-156966' '(at3g04380 : 403.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 190.0) no description available & (gnl|cdd|85073 : 114.0) no description available & (reliability: 806.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF10440;PF05033;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold659_100805-116404' '(at2g44150 : 150.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 85.5) no description available & (reliability: 300.0) & (original description: Putative Os09g0307800, Description = Os09g0307800 protein, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold1188_340385-361035' '(at1g77300 : 452.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 251.0) no description available & (gnl|cdd|47645 : 136.0) no description available & (reliability: 904.0) & (original description: Putative setd2, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF07496;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold1828_294454-300759' '(at5g17240 : 421.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 100.0) no description available & (reliability: 842.0) & (original description: Putative SDG40, Description = Os07g0471100 protein, PFAM = PF09273;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold5475_5451-10484' '(at4g13460 : 771.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47772 : 234.0) no description available & (gnl|cdd|36298 : 233.0) no description available & (reliability: 1542.0) & (original description: Putative SUVH9, Description = Histone-lysine N-methyltransferase family member SUVH9, PFAM = PF05033;PF02182;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00001510ctg004_2759-14814' '(at5g53430 : 1008.0) Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SET domain group 29 (SDG29); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: DNA mediated transformation, regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain protein 16 (TAIR:AT4G27910.1); Has 7010 Blast hits to 6787 proteins in 464 species: Archae - 2; Bacteria - 389; Metazoa - 3222; Fungi - 817; Plants - 1208; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|36296 : 607.0) no description available & (gnl|cdd|34742 : 128.0) no description available & (q8s4p6|ez1_maize : 90.1) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 2016.0) & (original description: Putative ATX3, Description = Histone-lysine N-methyltransferase ATX3, PFAM = PF00628;PF13831;PF00856;PF00855;PF13832)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00003200ctg002_23591-33133' '(at3g21820 : 525.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 1050.0) & (original description: Putative ATXR2, Description = Histone-lysine N-methyltransferase ATXR2, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00006313ctg010_1-6993' '(at3g04380 : 409.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 818.0) & (original description: Putative ehmt2, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856;PF10440)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00007556ctg008_2407-9490' '(at2g44150 : 356.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 165.0) no description available & (gnl|cdd|47645 : 131.0) no description available & (reliability: 712.0) & (original description: Putative whsc1, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00008246ctg012_474-11179' '(at1g76710 : 499.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 283.0) no description available & (gnl|cdd|85073 : 134.0) no description available & (q8s4p6|ez1_maize : 95.5) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 998.0) & (original description: Putative ASHH1, Description = Histone-lysine N-methyltransferase ASHH1, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00008825ctg016_13161-17604' '(at1g73100 : 546.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 245.0) no description available & (gnl|cdd|47772 : 196.0) no description available & (reliability: 1092.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF05033;PF00856;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00009319ctg009_4883-11749' '(at3g04380 : 431.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 190.0) no description available & (gnl|cdd|85073 : 111.0) no description available & (reliability: 862.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00010084ctg001_1761-16478' '(at4g15180 : 2092.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 122.0) no description available & (gnl|cdd|47645 : 89.3) no description available & (reliability: 4184.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00012208ctg003_1538-10686' '(at3g07670 : 716.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|36551 : 243.0) no description available & (p94026|rbcmt_tobac : 112.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (gnl|cdd|87855 : 88.4) no description available & (reliability: 1432.0) & (original description: Putative Sb04g029430, Description = Putative uncharacterized protein Sb04g029430, PFAM = PF00856;PF09273)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00012897ctg004_1070-7914' '(at2g44150 : 372.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 195.0) no description available & (gnl|cdd|47645 : 139.0) no description available & (reliability: 744.0) & (original description: Putative whsc1, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00018049ctg003_3245-6205' '(at2g19640 : 157.0) ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative ASHR2, Description = Histone-lysine N-methyltransferase ASHR2, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00020825ctg000_13445-16141' '(at5g13960 : 293.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|47645 : 98.9) no description available & (reliability: 586.0) & (original description: Putative KYP, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00022816ctg004_4825-10027' '(at3g04380 : 372.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 139.0) no description available & (gnl|cdd|47645 : 106.0) no description available & (reliability: 744.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00029200ctg008_7692-12844' '(at5g09790 : 458.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 152.0) no description available & (reliability: 916.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00628;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00054363ctg002_1-5799' '(at1g77300 : 175.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 116.0) no description available & (gnl|cdd|85073 : 88.6) no description available & (reliability: 350.0) & (original description: Putative setd2, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00163_1575648-1581581' '(at2g22740 : 472.0) Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 6 (SUVH6); FUNCTIONS IN: methyl-CpNpG binding, methyltransferase activity, methyl-CpG binding, methyl-CpNpN binding; INVOLVED IN: histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 240.0) no description available & (gnl|cdd|47772 : 154.0) no description available & (reliability: 944.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF05033;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00270_880059-896287' '(at1g05830 : 1172.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (gnl|cdd|36296 : 389.0) no description available & (gnl|cdd|34742 : 135.0) no description available & (q8s4p4|ez3_maize : 90.1) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 2344.0) & (original description: Putative ATX2, Description = Histone-lysine N-methyltransferase ATX2, PFAM = PF05965;PF13831;PF05964;PF13832;PF00855;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00419_1124489-1144043' '(at2g44150 : 426.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 200.0) no description available & (gnl|cdd|47645 : 137.0) no description available & (reliability: 852.0) & (original description: Putative ASHH3, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00849_88134-95348' '(at3g04380 : 402.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 189.0) no description available & (gnl|cdd|85073 : 114.0) no description available & (reliability: 804.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF10440;PF00856;PF05033)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01376_61183-76514' '(at1g05830 : 368.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative ATX1, Description = Histone-lysine N-methyltransferase ATX2, PFAM = PF05964;PF00855)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01798_374189-427156' '(at2g18850 : 546.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (q43088|rbcmt_pea : 82.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (reliability: 1092.0) & (original description: Putative At2g18850, Description = At2g18850, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01798_417156-422032' '(at2g18850 : 122.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (reliability: 244.0) & (original description: Putative glysoja_005790, Description = [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02043_445724-453464' '(at5g17240 : 461.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 922.0) & (original description: Putative SDG40, Description = Protein SET DOMAIN GROUP 40, PFAM = PF09273;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02043_445739-453508' '(at5g17240 : 460.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 103.0) no description available & (reliability: 920.0) & (original description: Putative SDG40, Description = Protein SET DOMAIN GROUP 40, PFAM = PF00856;PF09273)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02072_1858-13223' '(at2g44150 : 145.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 85.5) no description available & (reliability: 290.0) & (original description: Putative Os09g0307800, Description = Os09g0307800 protein, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02283_108822-123269' '(at4g27910 : 1008.0) SET domain protein 16 (SDG16); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 6853 Blast hits to 6701 proteins in 480 species: Archae - 2; Bacteria - 423; Metazoa - 3089; Fungi - 828; Plants - 1148; Viruses - 0; Other Eukaryotes - 1363 (source: NCBI BLink). & (gnl|cdd|36296 : 620.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (q8s4p6|ez1_maize : 86.3) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 2016.0) & (original description: Putative ATX3, Description = Histone-lysine N-methyltransferase ATX3, PFAM = PF00628;PF00855;PF13832;PF13831;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02290_549409-562505' '(at4g27910 : 1236.0) SET domain protein 16 (SDG16); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 6853 Blast hits to 6701 proteins in 480 species: Archae - 2; Bacteria - 423; Metazoa - 3089; Fungi - 828; Plants - 1148; Viruses - 0; Other Eukaryotes - 1363 (source: NCBI BLink). & (gnl|cdd|36296 : 664.0) no description available & (gnl|cdd|34742 : 120.0) no description available & (q8s4p4|ez3_maize : 84.3) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 2472.0) & (original description: Putative ATX4, Description = Histone-lysine N-methyltransferase ATX4, PFAM = PF13831;PF13832;PF00628;PF00856;PF00855)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02450_367947-395148' '(at2g44150 : 429.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 186.0) no description available & (gnl|cdd|47645 : 132.0) no description available & (reliability: 858.0) & (original description: Putative ASHH3, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02452_435139-445183' '(at1g77300 : 136.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase ASHH2, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02597_378217-390663' '(at1g77300 : 358.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 202.0) no description available & (gnl|cdd|85073 : 117.0) no description available & (reliability: 716.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF00856;PF07496)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03001_2193-7034' '(at5g24330 : 451.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36299 : 146.0) no description available & (gnl|cdd|85073 : 81.2) no description available & (reliability: 902.0) & (original description: Putative ATXR6, Description = Histone-lysine N-methyltransferase ATXR6, PFAM = PF00856;PF00628)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03227_290873-301371' '(at3g03750 : 317.0) SET domain protein 20 (SDG20); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding (TAIR:AT2G23740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 152.0) no description available & (gnl|cdd|47645 : 105.0) no description available & (reliability: 634.0) & (original description: Putative SUVR3, Description = Histone-lysine N-methyltransferase SUVR3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03445_156051-160036' '(at3g61740 : 643.0) ATX3; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), SAND domain (InterPro:IPR000770), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 7727 Blast hits to 7398 proteins in 492 species: Archae - 2; Bacteria - 431; Metazoa - 3516; Fungi - 841; Plants - 1504; Viruses - 0; Other Eukaryotes - 1433 (source: NCBI BLink). & (gnl|cdd|36296 : 414.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (q8s4p4|ez3_maize : 84.3) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 1286.0) & (original description: Putative At2g31630, Description = Putative SET-domain transcriptional regulator, PFAM = PF13832;PF13831;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03736_159881-174155' '(at4g30860 : 556.0) Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects.; SET domain group 4 (SDG4); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH3 (TAIR:AT2G44150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39643 : 192.0) no description available & (gnl|cdd|47645 : 132.0) no description available & (q8s4p5|ez2_maize : 84.3) Polycomb protein EZ2 (Enhancer of zeste protein 2) - Zea mays (Maize) & (reliability: 1112.0) & (original description: Putative ASHR3, Description = Histone-lysine N-methyltransferase ASHR3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03766_343519-352050' '(at5g14260 : 763.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36551 : 204.0) no description available & (gnl|cdd|87855 : 111.0) no description available & (reliability: 1526.0) & (original description: Putative Sb03g029140, Description = Putative uncharacterized protein Sb03g029140, PFAM = PF09273)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03852_55268-60519' '(at2g35160 : 632.0) Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 5 (SUVH5); FUNCTIONS IN: histone methyltransferase activity; INVOLVED IN: maintenance of DNA methylation, histone methylation, regulation of gene expression, epigenetic, response to chitin, chromatin silencing by small RNA; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 5295 Blast hits to 5101 proteins in 461 species: Archae - 0; Bacteria - 388; Metazoa - 2414; Fungi - 548; Plants - 1120; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|36298 : 254.0) no description available & (gnl|cdd|65922 : 188.0) no description available & (reliability: 1264.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF02182;PF05033)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04485_334796-348427' '(at3g04380 : 468.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 936.0) & (original description: Putative ehmt2, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856;PF05033;PF10440)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04690_286357-300744' '(at4g15180 : 2100.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 120.0) no description available & (gnl|cdd|47645 : 88.9) no description available & (reliability: 4200.0) & (original description: Putative SDG2, Description = Putative histone-lysine N-methyltransferase ATXR3, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04727_716054-724984' '(at3g07670 : 719.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|36551 : 243.0) no description available & (p94026|rbcmt_tobac : 110.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (gnl|cdd|87855 : 86.5) no description available & (reliability: 1438.0) & (original description: Putative Sb04g029430, Description = Putative uncharacterized protein Sb04g029430, PFAM = PF09273;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05823_324017-328615' '(at5g43990 : 127.0) Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.; SUVR2; FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400014693, Description = BnaC02g30730D protein, PFAM = PF10440)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05929_120599-127876' '(at3g04380 : 435.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 109.0) no description available & (reliability: 870.0) & (original description: Putative Sb04g026310, Description = Putative uncharacterized protein Sb04g026310, PFAM = PF00856;PF10440;PF05033)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05929_756171-760295' '(at4g13460 : 773.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47772 : 234.0) no description available & (gnl|cdd|36298 : 232.0) no description available & (reliability: 1546.0) & (original description: Putative SUVH9, Description = Histone-lysine N-methyltransferase family member SUVH9, PFAM = PF00856;PF02182;PF05033)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06094_750637-780538' '(at3g21820 : 605.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative ATXR2, Description = Histone-lysine N-methyltransferase ATXR2, PFAM = PF00856;PF01753)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06187_145190-178233' '(at5g13960 : 709.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36298 : 227.0) no description available & (gnl|cdd|47772 : 172.0) no description available & (reliability: 1418.0) & (original description: Putative SUVH4, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4, PFAM = PF00856;PF05033;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06514_177446-191365' '(at4g15180 : 2078.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 121.0) no description available & (gnl|cdd|47645 : 88.9) no description available & (reliability: 4156.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06761_83346-97795' '(gnl|cdd|36296 : 163.0) no description available & (at3g61740 : 137.0) ATX3; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), SAND domain (InterPro:IPR000770), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 7727 Blast hits to 7398 proteins in 492 species: Archae - 2; Bacteria - 431; Metazoa - 3516; Fungi - 841; Plants - 1504; Viruses - 0; Other Eukaryotes - 1433 (source: NCBI BLink). & (gnl|cdd|47645 : 124.0) no description available & (reliability: 274.0) & (original description: Putative kmt2a, Description = Myeloid/lymphoid or mixed-lineage leukemia, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06779_417572-420743' '(at2g19640 : 359.0) ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative ASHR2, Description = Histone-lysine N-methyltransferase ASHR2, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06795_17231-20616' '(at1g26761 : 449.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative Ccrd_001757, Description = Glycosyl hydrolase, five-bladed beta-propellor domain-containing protein, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07775_278827-309830' '(at1g77300 : 682.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 256.0) no description available & (gnl|cdd|47645 : 133.0) no description available & (reliability: 1364.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF07496;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07937_408548-411918' '(at3g55080 : 416.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36552 : 183.0) no description available & (p94026|rbcmt_tobac : 85.5) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (reliability: 832.0) & (original description: Putative At3g55080, Description = At3g55080, PFAM = PF09273;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07937_409080-411408' '(at3g55080 : 243.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At3g55080, Description = At3g55080, PFAM = )' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf10322_247525-251126' '(at1g26760 : 523.0) SET domain protein 35 (SDG35); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative , Description = , PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf11408_168869-203410' '(at1g76710 : 351.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 282.0) no description available & (gnl|cdd|85073 : 130.0) no description available & (q8s4p6|ez1_maize : 92.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 702.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf11408_180988-201882' '(at1g76710 : 149.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 91.7) no description available & (reliability: 298.0) & (original description: Putative nsd1b, Description = Putative histone-lysine N-methyltransferase NSD2, PFAM = PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf12382_76536-80793' '(at1g73100 : 556.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 242.0) no description available & (gnl|cdd|47772 : 213.0) no description available & (reliability: 1112.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF05033;PF00856;PF02182)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf14642_221656-229177' '(at5g09790 : 454.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 154.0) no description available & (gnl|cdd|85073 : 81.2) no description available & (reliability: 908.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00628;PF00856)' T
'27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf32746_103075-115170' '(at3g04380 : 438.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 193.0) no description available & (gnl|cdd|85073 : 115.0) no description available & (reliability: 876.0) & (original description: Putative SUV39, Description = Histone-lysine N-methyltransferase Su(Var)3-9, PFAM = PF10440;PF00856;PF05033)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'nbv0.3scaffold14550_31936-39703' '(at1g03150 : 336.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 2433 Blast hits to 2433 proteins in 772 species: Archae - 233; Bacteria - 716; Metazoa - 629; Fungi - 398; Plants - 148; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38444 : 249.0) no description available & (gnl|cdd|30804 : 81.2) no description available & (reliability: 672.0) & (original description: Putative nat5, Description = N-acetyltransferase, PFAM = PF00583)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf02245_317282-323703' '(at5g38110 : 270.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 248.0) no description available & (gnl|cdd|86716 : 244.0) no description available & (reliability: 540.0) & (original description: Putative ASF1B, Description = Histone chaperone ASF1B, PFAM = PF04729)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf04024_265575-311277' '(at1g66740 : 269.0) Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility.; SGA2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chromatin assembly or disassembly, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: anti- silencing function 1b (TAIR:AT5G38110.1); Has 608 Blast hits to 608 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 247; Fungi - 167; Plants - 75; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|38475 : 246.0) no description available & (gnl|cdd|86716 : 240.0) no description available & (reliability: 538.0) & (original description: Putative ASF1A, Description = Probable histone chaperone ASF1A, PFAM = PF04729)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf04570_232782-238688' '(at5g38110 : 268.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 238.0) no description available & (gnl|cdd|86716 : 237.0) no description available & (reliability: 536.0) & (original description: Putative ASF1B, Description = Histone chaperone ASF1B, PFAM = PF04729)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf05896_46818-58043' '(at1g03150 : 338.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 2433 Blast hits to 2433 proteins in 772 species: Archae - 233; Bacteria - 716; Metazoa - 629; Fungi - 398; Plants - 148; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38444 : 252.0) no description available & (gnl|cdd|30804 : 83.1) no description available & (reliability: 676.0) & (original description: Putative nat5, Description = N-acetyltransferase, PFAM = PF00583)' T
'27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf07002_21329-26363' '(at5g38110 : 265.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 235.0) no description available & (gnl|cdd|86716 : 231.0) no description available & (reliability: 530.0) & (original description: Putative ASF1A, Description = Probable histone chaperone ASF1A, PFAM = PF04729)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold806_87743-101602' '(at5g44560 : 221.0) VPS2.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38440 : 214.0) no description available & (gnl|cdd|86302 : 96.8) no description available & (reliability: 442.0) & (original description: Putative vps2B, Description = Charged multivesicular body protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold3461_4951-7999' '(at1g17730 : 266.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 221.0) no description available & (reliability: 532.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold9996_67571-76356' '(at5g09260 : 166.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 160.0) no description available & (reliability: 328.0) & (original description: Putative CHMP6, Description = Vacuolar sorting-associated-like protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold31856_19452-22733' '(at5g22950 : 108.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38439 : 107.0) no description available & (reliability: 216.0) & (original description: Putative CHMP3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold39861_13467-19480' '(at4g29160 : 192.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 177.0) no description available & (gnl|cdd|86302 : 109.0) no description available & (reliability: 384.0) & (original description: Putative SNF7, Description = Charged multivesicular body protein 4, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold41201_11913-17620' '(gnl|cdd|38121 : 184.0) no description available & (at5g09260 : 177.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|86302 : 99.1) no description available & (reliability: 344.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold57618_102-9400' '(at5g22950 : 202.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38439 : 202.0) no description available & (reliability: 404.0) & (original description: Putative CHMP3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.5scaffold141_840325-850655' '(at5g09260 : 191.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 184.0) no description available & (gnl|cdd|86302 : 100.0) no description available & (reliability: 362.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00005140ctg007_19879-24927' '(at2g06530 : 249.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38440 : 241.0) no description available & (gnl|cdd|86302 : 117.0) no description available & (reliability: 498.0) & (original description: Putative vps2, Description = Charged multivesicular body protein 2a, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00007335ctg017_1627-4179' '(at2g19830 : 171.0) SNF7.2; INVOLVED IN: vesicle-mediated transport; LOCATED IN: ESCRT III complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT4G29160.3); Has 1789 Blast hits to 1789 proteins in 248 species: Archae - 16; Bacteria - 15; Metazoa - 681; Fungi - 406; Plants - 433; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36869 : 167.0) no description available & (gnl|cdd|86302 : 106.0) no description available & (reliability: 342.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00016695ctg000_1-5095' '(at5g04850 : 328.0) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (gnl|cdd|36868 : 228.0) no description available & (gnl|cdd|86302 : 119.0) no description available & (reliability: 656.0) & (original description: Putative CHMP5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00028440ctg000_2299-9389' '(at4g29160 : 188.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 179.0) no description available & (gnl|cdd|86302 : 108.0) no description available & (reliability: 376.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00206_147577-150185' '(at1g17730 : 274.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 230.0) no description available & (reliability: 548.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00271_767265-777524' '(at5g44560 : 222.0) VPS2.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38440 : 213.0) no description available & (gnl|cdd|86302 : 96.1) no description available & (reliability: 444.0) & (original description: Putative SLP, Description = Charged multivesicular body protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00525_557043-563177' '(at3g10640 : 324.0) VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G04850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36868 : 226.0) no description available & (gnl|cdd|86302 : 121.0) no description available & (reliability: 648.0) & (original description: Putative chmp5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00841_52525-58037' '(gnl|cdd|38439 : 206.0) no description available & (at5g22950 : 204.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86302 : 81.4) no description available & (reliability: 408.0) & (original description: Putative chmp3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf01146_501854-513930' '(at4g29160 : 198.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 186.0) no description available & (gnl|cdd|86302 : 110.0) no description available & (reliability: 396.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf02790_490268-496450' '(at2g06530 : 251.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38440 : 240.0) no description available & (gnl|cdd|86302 : 117.0) no description available & (reliability: 502.0) & (original description: Putative vps2, Description = Charged multivesicular body protein 2a, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf03138_215547-238417' '(at5g04850 : 327.0) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (gnl|cdd|36868 : 228.0) no description available & (gnl|cdd|86302 : 120.0) no description available & (reliability: 654.0) & (original description: Putative chmp5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf03351_381973-393049' '(at5g09260 : 195.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 185.0) no description available & (gnl|cdd|86302 : 99.5) no description available & (reliability: 384.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04316_1137615-1144960' '(at4g29160 : 189.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 177.0) no description available & (gnl|cdd|86302 : 108.0) no description available & (reliability: 378.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04560_198803-213369' '(gnl|cdd|38439 : 206.0) no description available & (at5g22950 : 205.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative chmp3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04675_50034-58628' '(at4g29160 : 211.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 178.0) no description available & (gnl|cdd|86302 : 110.0) no description available & (reliability: 422.0) & (original description: Putative BnaA07g00950D, Description = BnaA07g00950D protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf05272_122810-125822' '(at1g17730 : 266.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 221.0) no description available & (reliability: 532.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09116_386185-388360' '(at1g03950 : 124.0) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 111.0) no description available & (reliability: 248.0) & (original description: Putative VPS2B, Description = Vacuolar sorting-associated protein 2-like protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09116_388361-391487' '(at1g03950 : 96.7) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 92.0) no description available & (reliability: 193.4) & (original description: Putative At1g03950, Description = Vacuolar sorting-associated protein 2-like protein, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09792_186346-194008' '(at1g03950 : 223.0) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 203.0) no description available & (gnl|cdd|86302 : 102.0) no description available & (reliability: 446.0) & (original description: Putative SLP, Description = Subunit of the ESCRT-III complex, PFAM = PF03357)' T
'27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf10542_71652-79673' '(at3g62080 : 287.0) SNF7 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); Has 1192 Blast hits to 1169 proteins in 233 species: Archae - 26; Bacteria - 65; Metazoa - 638; Fungi - 121; Plants - 165; Viruses - 1; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|38122 : 173.0) no description available & (reliability: 574.0) & (original description: Putative BnaC08g32010D, Description = BnaC08g32010D protein, PFAM = PF03357)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'nbv0.5scaffold299_618653-627053' '(at5g67480 : 369.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 213.0) no description available & (reliability: 738.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF00651;PF02135)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben044scf00053993ctg000_1123-6216' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 233.0) no description available & (reliability: 730.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf00168_1158580-1163542' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 237.0) no description available & (reliability: 714.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf00991_797862-801690' '(at5g67480 : 395.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 225.0) no description available & (reliability: 790.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF00651;PF02135)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf13139_18494-32439' '(at5g67480 : 363.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 215.0) no description available & (reliability: 726.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF02135;PF00651)' T
'27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf16613_510682-514524' '(at5g67480 : 393.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 226.0) no description available & (reliability: 786.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF02135;PF00651)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.3scaffold11003_908-4743' '(at3g43590 : 90.5) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400005910, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.3scaffold38669_13405-19604' '(at3g43590 : 250.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative BnaA06g20160D, Description = BnaA06g20160D protein, PFAM = PF00098;PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold1049_304912-311556' '(at4g00980 : 83.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = , PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold1052_21850-26514' '(at5g07350 : 286.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 156.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 572.0) & (original description: Putative SN4TDR, Description = Nuclease domain-containing protein 1, PFAM = PF00567;PF00565)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold2198_179343-185008' '(at3g43590 : 93.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative At3g43590, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00002913ctg008_8029-10949' '(at4g00980 : 82.4) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00004264ctg003_1065-10240' '(at5g07350 : 1260.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 647.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 2520.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00567)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00006091ctg011_10253-13611' '(at3g43590 : 151.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400005910, Description = Zinc knuckle family protein, PFAM = PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00006091ctg016_189-4066' '(at3g43590 : 89.4) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Os11g0573200, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00014502ctg004_18575-25420' '(at3g02820 : 197.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|71399 : 108.0) no description available & (reliability: 394.0) & (original description: Putative BnaCnng05970D, Description = TIMELESS-interacting protein, PFAM = PF07962;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00019064ctg003_4340-23191' '(at4g19190 : 328.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Zinc finger, CCHC-type (InterPro:IPR001878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38998 : 118.0) no description available & (reliability: 656.0) & (original description: Putative At4g19190, Description = BnaA01g09930D protein, PFAM = PF15288;PF10197)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00025628ctg009_2247-5038' '(at5g49400 : 138.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative TIDP3543, Description = BnaC02g39060D protein, PFAM = PF13917)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00027521ctg007_2840-5090' '(at4g00980 : 83.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00029709ctg009_940-4861' '(at3g43590 : 97.1) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA06g20160D, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00207_542391-571201' '(at3g43590 : 149.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG401021491, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00207_543893-570733' '(at3g43590 : 152.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaC03g54400D, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00377_212187-219640' '(at3g02820 : 198.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|71399 : 109.0) no description available & (gnl|cdd|38214 : 87.4) no description available & (reliability: 396.0) & (original description: Putative BnaCnng05970D, Description = BnaCnng05970D protein, PFAM = PF00098;PF07962)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00595_978744-983813' '(at5g52380 : 243.0) VASCULAR-RELATED NAC-DOMAIN 6; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT3G43590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39601 : 86.8) no description available & (reliability: 486.0) & (original description: Putative At5g52380, Description = At5g52380, PFAM = PF00098;PF00098;PF14392;PF14392;PF14392)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf01688_260951-280883' '(at4g19190 : 334.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Zinc finger, CCHC-type (InterPro:IPR001878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38998 : 105.0) no description available & (reliability: 668.0) & (original description: Putative At4g19190, Description = BnaA01g09930D protein, PFAM = PF15288;PF10197)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02175_79167-115294' '(at4g00980 : 93.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative HACRE1, Description = Copia-like retrotransposon, PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02581_327922-336456' '(at5g07350 : 1252.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 636.0) no description available & (gnl|cdd|84869 : 102.0) no description available & (reliability: 2504.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00567)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02679_36962-39756' '(at5g49400 : 136.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative TIDP3543, Description = BnaC02g39060D protein, PFAM = PF13917)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf03091_51813-56804' '(at3g62330 : 376.0) Zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 1256 Blast hits to 1123 proteins in 138 species: Archae - 0; Bacteria - 13; Metazoa - 788; Fungi - 82; Plants - 113; Viruses - 7; Other Eukaryotes - 253 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative BnaA09g39810D, Description = BnaA09g39810D protein, PFAM = )' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf03226_471183-474040' '(at4g00980 : 85.9) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf04093_102354-105013' '(at4g00980 : 89.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = , PFAM = PF14223)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf05077_178630-184829' '(at3g43590 : 248.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative PGSC0003DMG400002995, Description = Zinc finger, CCHC-type, PFAM = PF00098;PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf07579_418002-441084' '(at5g07350 : 1276.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 635.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 2552.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00565;PF00567)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf07579_419927-422671' '(at5g07350 : 216.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 116.0) no description available & (reliability: 432.0) & (original description: Putative SN4TDR, Description = Nuclease domain-containing protein 1, PFAM = PF00565;PF00567)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf08415_135122-140889' '(at5g52380 : 234.0) VASCULAR-RELATED NAC-DOMAIN 6; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT3G43590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39601 : 89.1) no description available & (reliability: 468.0) & (original description: Putative At5g52380, Description = At5g52380, PFAM = PF14392;PF14392;PF14392;PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf11802_199608-213319' '(at3g43590 : 243.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative Sb05g022420, Description = Putative uncharacterized protein Sb05g022420, PFAM = PF00098;PF00098;PF00098)' T
'27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf13289_209037-215603' '(at3g43590 : 244.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative Sb05g022420, Description = Putative uncharacterized protein Sb05g022420, PFAM = PF00098;PF00098;PF00098)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold6778_16216-18878' '(p27484|grp2_nicsy : 127.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 119.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 238.0) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00098;PF00098;PF00313)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold96043_532-3460' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 88.6) no description available & (gnl|cdd|35331 : 86.0) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold617_550151-552872' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 93.2) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 244.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold617_550169-573595' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.3) no description available & (gnl|cdd|35331 : 86.7) no description available & (reliability: 248.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold2809_24299-27071' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 90.5) no description available & (gnl|cdd|35331 : 86.3) no description available & (reliability: 248.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 184.0) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00002658ctg002_2536-5118' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.7) no description available & (gnl|cdd|35331 : 88.7) no description available & (reliability: 244.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00003840ctg012_4402-7082' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|36139 : 86.5) no description available & (at4g38680 : 85.9) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00313;PF00098;PF00098)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00004829ctg009_2555-5178' '(p27484|grp2_nicsy : 129.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 87.3) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 194.8) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf00929_63150-67295' '(p49310|grp1_sinal : 129.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 125.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 85.6) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 238.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf01847_878226-880801' '(p27484|grp2_nicsy : 135.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 81.9) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 194.8) & (original description: Putative nab1, Description = Cold shock domain protein 1, PFAM = PF00313;PF00098)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 174.0) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf03214_20133-23489' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.0) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 244.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf03953_148970-151950' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 87.5) no description available & (gnl|cdd|31068 : 84.3) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf06203_17991-20910' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 86.6) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf09268_154841-157649' '(q03878|grp1_dauca : 138.0) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35371 : 87.8) no description available & (gnl|cdd|31068 : 86.6) no description available & (reliability: 254.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold2054_78792-81475' '(at4g24660 : 186.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 106.0) no description available & (reliability: 372.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold9921_42128-45585' '(at1g75240 : 177.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 354.0) & (original description: Putative ZHD6, Description = Zinc-finger homeodomain protein 6, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold11898_11876-15028' '(at5g65410 : 81.3) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold15096_1507-4043' '(at1g14440 : 132.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold15396_31888-34685' '(at5g15210 : 155.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 101.0) no description available & (reliability: 310.0) & (original description: Putative ZHD1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold64545_2810-6356' '(at1g14440 : 209.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 418.0) & (original description: Putative ZHD4, Description = Zinc-finger homeodomain protein 4, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold125992_1-1844' '(at3g28920 : 195.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 390.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.5scaffold1791_105966-108450' '(at1g14440 : 109.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative HB33, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00001404ctg001_17539-20650' '(at4g24660 : 84.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00008312ctg013_543-3282' '(at2g18350 : 108.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00012106ctg012_4115-7377' '(at2g18350 : 188.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 111.0) no description available & (reliability: 376.0) & (original description: Putative ZHD7, Description = Zinc-finger homeodomain protein 7, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00021_262620-265255' '(at5g15210 : 155.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 99.6) no description available & (reliability: 310.0) & (original description: Putative hb1, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00305_14729-17661' '(at2g18350 : 187.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 109.0) no description available & (reliability: 374.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00339_1371044-1374464' '(at3g28917 : 102.0) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 96.5) no description available & (reliability: 194.2) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00350_451246-454783' '(at1g75240 : 173.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 107.0) no description available & (reliability: 346.0) & (original description: Putative ZHD2, Description = Zinc finger-homeodomain protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00705_580180-583822' '(at1g14440 : 205.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 410.0) & (original description: Putative ZHD6, Description = Zinc-finger homeodomain protein 6, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00966_112910-115704' '(at5g15210 : 159.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 101.0) no description available & (reliability: 318.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01326_188626-191699' '(at3g28920 : 200.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 103.0) no description available & (reliability: 400.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01372_647840-656248' '(at1g14440 : 202.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 404.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01970_642201-645353' '(at5g65410 : 83.2) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf03421_545709-548392' '(at4g24660 : 160.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 80.4) no description available & (reliability: 320.0) & (original description: Putative hb2, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf03474_87933-91006' '(at3g28920 : 196.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 109.0) no description available & (reliability: 392.0) & (original description: Putative ZHD11, Description = Zinc-finger homeodomain protein 11, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04054_135454-139013' '(at4g24660 : 199.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 110.0) no description available & (reliability: 398.0) & (original description: Putative ZHD1, Description = Zinc finger homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04113_1665609-1669066' '(at1g75240 : 167.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 334.0) & (original description: Putative ZHD2, Description = Zinc finger-homeodomain protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04950_532523-536210' '(at4g24660 : 175.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 350.0) & (original description: Putative ZHD1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05060_326492-328773' '(at3g28917 : 89.7) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 85.0) no description available & (reliability: 168.0) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05060_340664-343731' '(at3g28920 : 197.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 394.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05565_238414-240950' '(at1g14440 : 132.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf09271_41666-47264' '(at4g24660 : 201.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 107.0) no description available & (reliability: 402.0) & (original description: Putative hb2, Description = ZF-HD homeobox protein, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf20961_93022-98497' '(at2g02540 : 180.0) Zinc finger homeobox protein. Expressed in vascular tissue. In a yeast one hybrid system was not able to transactivate a reporter gene.; homeobox protein 21 (HB21); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 31 (TAIR:AT1G14440.2); Has 496 Blast hits to 486 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68346 : 104.0) no description available & (reliability: 360.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf20961_95167-98518' '(at4g24660 : 181.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 106.0) no description available & (reliability: 362.0) & (original description: Putative ZHD1, Description = Zinc finger homeodomain protein 1, PFAM = PF04770)' T
'27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf39169_1483-4887' '(at4g24660 : 192.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 112.0) no description available & (reliability: 384.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T
'27.3.81' 'RNA.regulation of transcription.S1FA' '' ''
'27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben044scf00029945ctg008_2542-8002' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 604.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T
'27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben101scf09644_28633-35099' '(at1g14410 : 301.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 602.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T
'27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben101scf14523_42031-47491' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 598.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T
'27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'nbv0.3scaffold37801_9777-13483' '(at4g37740 : 90.9) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08879;PF08880)' T
'27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'nbv0.5scaffold3677_213965-226761' '(at4g37740 : 90.1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T
'27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf01121_148949-154898' '(at3g52910 : 177.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 85.8) no description available & (reliability: 354.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08880;PF08879)' T
'27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf02897_214283-220699' '(at3g52910 : 190.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 85.0) no description available & (reliability: 380.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08880;PF08879)' T
'27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf05222_398663-410073' '(at3g52910 : 209.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 84.6) no description available & (reliability: 418.0) & (original description: Putative BnaC03g20100D, Description = BnaC03g20100D protein, PFAM = PF08880;PF08879)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.3scaffold3972_50284-53216' '(at1g14685 : 240.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 211.0) no description available & (reliability: 480.0) & (original description: Putative BPC2, Description = Protein BASIC PENTACYSTEINE2, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.5scaffold2018_56672-60010' '(at5g42520 : 337.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 214.0) no description available & (reliability: 674.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.5scaffold5670_47515-50441' '(at1g14685 : 243.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 210.0) no description available & (reliability: 486.0) & (original description: Putative BPC2, Description = Protein BASIC PENTACYSTEINE2, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00152_1802084-1805380' '(at5g42520 : 335.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 214.0) no description available & (reliability: 670.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00508_964227-967397' '(at5g42520 : 341.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 206.0) no description available & (reliability: 682.0) & (original description: Putative BBR/BPC3, Description = GAGA-binding transcriptional activator, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00990_1-2592' '(at5g42520 : 357.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 206.0) no description available & (reliability: 714.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf04052_179990-182835' '(at1g14685 : 300.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 222.0) no description available & (reliability: 600.0) & (original description: Putative BPC1, Description = Protein BASIC PENTACYSTEINE1, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf05146_80397-83329' '(at1g14685 : 228.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 209.0) no description available & (reliability: 456.0) & (original description: Putative BBR, Description = GAGA-binding transcriptional activator, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf06267_4200-7534' '(at5g42520 : 231.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 193.0) no description available & (reliability: 462.0) & (original description: Putative Os06g0130600, Description = Barley B recombinant-like protein D, PFAM = PF06217)' T
'27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf10919_150350-153508' '(at2g21240 : 301.0) basic pentacysteine 4 (BPC4); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 5 (TAIR:AT4G38910.2); Has 263 Blast hits to 247 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 40; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|69723 : 194.0) no description available & (reliability: 602.0) & (original description: Putative BPC4, Description = Protein BASIC PENTACYSTEINE4, PFAM = PF06217)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'nbv0.3scaffold542_61031-71559' '(at5g13730 : 304.0) Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.; sigma factor 4 (SIG4); FUNCTIONS IN: DNA-directed RNA polymerase activity, sigma factor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30914 : 217.0) no description available & (reliability: 608.0) & (original description: Putative sig4, Description = Sigma factor, PFAM = PF04545;PF04542;PF04539)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'nbv0.5scaffold1676_411675-420018' '(at2g36990 : 459.0) Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.; RNApolymerase sigma-subunit F (SIGF); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 23918 Blast hits to 23899 proteins in 2801 species: Archae - 0; Bacteria - 17084; Metazoa - 1; Fungi - 2; Plants - 241; Viruses - 15; Other Eukaryotes - 6575 (source: NCBI BLink). & (gnl|cdd|82219 : 253.0) no description available & (reliability: 918.0) & (original description: Putative sig6, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben044scf00034446ctg000_2171-8736' '(at1g08540 : 355.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 205.0) no description available & (reliability: 710.0) & (original description: Putative rpoD, Description = RNA polymerase sigma factor SigA, PFAM = PF04539;PF04542)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf00471_1-6568' '(at1g08540 : 547.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 301.0) no description available & (reliability: 1094.0) & (original description: Putative sig2, Description = Sigma factor, PFAM = PF00140;PF04545;PF04539;PF04542)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf00530_630485-637486' '(at5g24120 : 529.0) Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.; sigma factor E (SIGE); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82219 : 157.0) no description available & (reliability: 1058.0) & (original description: Putative sig5, Description = Sigma factor, PFAM = PF04542;PF04539;PF04539;PF04545)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf02217_37514-52345' '(at3g53920 : 378.0) Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.; RNApolymerase sigma-subunit C (SIGC); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 22698 Blast hits to 22688 proteins in 2768 species: Archae - 0; Bacteria - 16386; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 4; Other Eukaryotes - 6035 (source: NCBI BLink). & (gnl|cdd|82219 : 189.0) no description available & (reliability: 756.0) & (original description: Putative sig3, Description = Sigma factor, PFAM = PF04539;PF04542;PF04545)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03115_346424-353312' '(at1g64860 : 533.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 189.0) no description available & (reliability: 1066.0) & (original description: Putative sig1, Description = RNA polymerase sigma factor 1, PFAM = PF04542;PF04545;PF04539)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03154_12390-18707' '(at5g13730 : 305.0) Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.; sigma factor 4 (SIG4); FUNCTIONS IN: DNA-directed RNA polymerase activity, sigma factor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30914 : 221.0) no description available & (reliability: 610.0) & (original description: Putative sig4, Description = Sigma factor, PFAM = PF04542;PF04545;PF12945;PF04539)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03576_92132-99478' '(at1g64860 : 594.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 183.0) no description available & (reliability: 1188.0) & (original description: Putative sig1, Description = Sigma factor, PFAM = PF04545;PF04542;PF04539)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf05483_182608-189786' '(at1g08540 : 471.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 292.0) no description available & (reliability: 942.0) & (original description: Putative sig2, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf12983_180936-187956' '(at1g64860 : 587.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 179.0) no description available & (reliability: 1174.0) & (original description: Putative sig1, Description = Sigma factor, PFAM = PF04545;PF04539;PF04542)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf14311_110030-117542' '(at2g36990 : 472.0) Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.; RNApolymerase sigma-subunit F (SIGF); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 23918 Blast hits to 23899 proteins in 2801 species: Archae - 0; Bacteria - 17084; Metazoa - 1; Fungi - 2; Plants - 241; Viruses - 15; Other Eukaryotes - 6575 (source: NCBI BLink). & (gnl|cdd|82219 : 253.0) no description available & (reliability: 944.0) & (original description: Putative sig6, Description = Sigma factor, PFAM = PF04539;PF04545;PF04542)' T
'27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf16148_109506-117445' '(at3g53920 : 378.0) Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.; RNApolymerase sigma-subunit C (SIGC); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 22698 Blast hits to 22688 proteins in 2768 species: Archae - 0; Bacteria - 16386; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 4; Other Eukaryotes - 6035 (source: NCBI BLink). & (gnl|cdd|81791 : 180.0) no description available & (reliability: 756.0) & (original description: Putative sig3, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T
'27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'nbv0.3scaffold65149_5572-13488' '(at1g10720 : 174.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T
'27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf01774_218463-224875' '(at1g10720 : 183.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T
'27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf05035_500760-506930' '(at1g10720 : 183.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T
'27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf07797_153340-161779' '(at1g10720 : 174.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T
'27.3.87' 'RNA.regulation of transcription.VOZ' '' ''
'27.3.88' 'RNA.regulation of transcription.rcd1-like' '' ''
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.3scaffold39807_688-3965' '(at4g18830 : 109.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 84.5) no description available & (reliability: 218.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.3scaffold94420_2370-4768' '(at5g04820 : 166.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold67_63470-66495' '(at5g01840 : 92.4) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 184.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1339_408852-411679' '(at2g36050 : 85.9) ovate family protein 15 (OFP15); LOCATED IN: chloroplast; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 18 (TAIR:AT3G52540.1); Has 245 Blast hits to 245 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 244; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative Sb05g003530, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1645_289342-292646' '(at4g18830 : 107.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 214.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1881_30422-33823' '(at2g18500 : 101.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 202.0) & (original description: Putative OFP6, Description = ATOFP3/OFP3, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold3073_186818-191436' '(at5g58360 : 97.4) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00003220ctg020_304-3789' '(at2g18500 : 100.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 84.5) no description available & (reliability: 200.0) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00010468ctg035_4797-8114' '(at5g19650 : 82.0) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00024423ctg008_1789-4679' '(at5g58360 : 103.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400030384, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00028647ctg003_2591-5595' '(at5g01840 : 92.0) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 88.0) no description available & (reliability: 184.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00044928ctg001_480-3505' '(at5g01840 : 92.8) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 185.6) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00049515ctg002_1-2153' '(at1g06920 : 92.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 184.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00050859ctg004_1257-4200' '(at5g04820 : 99.8) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 81.4) no description available & (reliability: 199.6) & (original description: Putative ATOFP18, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00058761ctg002_11792-13702' '(at2g18500 : 100.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01290_215138-218010' '(at5g58360 : 104.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 208.0) & (original description: Putative BnaA05g12010D, Description = BnaA05g12010D protein, PFAM = PF04844;PF13724)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01371_308532-311195' '(at2g18500 : 98.6) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01372_310715-313587' '(at5g04820 : 104.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative OFP15, Description = AtOFP15, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01417_501567-504559' '(at5g01840 : 91.7) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 183.4) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF13724;PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01834_467244-469987' '(at5g04820 : 132.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 81.8) no description available & (reliability: 264.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02030_110989-114177' '(at1g79960 : 119.0) ovate family protein 14 (OFP14); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 13 (TAIR:AT5G04820.1); Has 451 Blast hits to 451 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 29; Plants - 394; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400005682, Description = Ovate family protein 14, putative, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02319_786719-789759' '(at5g19650 : 82.4) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02563_177789-181844' '(at2g18500 : 124.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 86.1) no description available & (reliability: 248.0) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02783_130448-133302' '(at5g04820 : 88.6) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative ATOFP18, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf03693_554496-557866' '(at2g18500 : 87.8) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf04608_266379-269116' '(at5g04820 : 161.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf05948_296310-302791' '(at4g18830 : 106.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 82.6) no description available & (reliability: 212.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08034_56743-59294' '(at3g52525 : 88.6) ovate family protein 6 (OFP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: Ovate family protein (TAIR:AT2G36026.1); Has 453 Blast hits to 451 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08341_1122144-1125319' '(at5g19650 : 84.3) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative OFP6, Description = Ovate family protein, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08931_34155-37395' '(at5g19650 : 89.0) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf09232_74226-77251' '(at1g06920 : 93.2) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 186.4) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf10774_228935-231531' '(at2g36026 : 117.0) Ovate family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 6 (TAIR:AT3G52525.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T
'27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf13680_7917-10924' '(at1g06920 : 97.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T
'27.3.90' 'RNA.regulation of transcription.Tify' '' ''
'27.3.90.1' 'RNA.regulation of transcription.Tify.Tify' '' ''
'27.3.90.2' 'RNA.regulation of transcription.Tify.JAZ' '' ''
'27.3.90.3' 'RNA.regulation of transcription.Tify.PPD family' '' ''
'27.3.90.4' 'RNA.regulation of transcription.Tify.ZML' '' ''
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold867_4445-8436' '(at5g13150 : 553.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 465.0) no description available & (gnl|cdd|86233 : 348.0) no description available & (reliability: 1106.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1043_57224-61217' '(at1g04500 : 182.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 81.4) no description available & (reliability: 364.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1502_66799-69345' '(gnl|cdd|84686 : 87.2) no description available & (at4g36020 : 86.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00098;PF00098;PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1520_45795-64106' '(at5g43100 : 733.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 241.0) no description available & (gnl|cdd|84452 : 125.0) no description available & (q6yny7|asp1_orysa : 107.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1466.0) & (original description: Putative Sb02g038150, Description = Putative uncharacterized protein Sb02g038150, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold2748_64118-66751' '(at2g36000 : 188.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 100.0) no description available & (gnl|cdd|36481 : 87.8) no description available & (reliability: 376.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold3958_37903-46306' '(at1g77930 : 266.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35934 : 88.6) no description available & (gnl|cdd|30832 : 85.3) no description available & (reliability: 532.0) & (original description: Putative At1g77930, Description = At1g77930, PFAM = PF00226)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold4961_1545-14995' '(at3g20800 : 508.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 426.0) no description available & (gnl|cdd|38246 : 422.0) no description available & (reliability: 1016.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold5093_29623-36145' '(at1g45207 : 285.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 87.0) no description available & (reliability: 570.0) & (original description: Putative At1g45207, Description = Remorin-like protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold5531_32409-43239' '(at1g07705 : 630.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 97.0) no description available & (reliability: 1254.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold6593_52905-59155' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 137.0) no description available & (reliability: 1278.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold6778_16216-18878' '(p27484|grp2_nicsy : 127.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 119.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 220.0) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00098;PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold7577_51496-54401' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold8206_29215-42355' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 489.0) no description available & (gnl|cdd|47550 : 249.0) no description available & (p23111|cdc2_maize : 224.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold10644_22210-25556' '(at1g64830 : 364.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 220.0) no description available & (gnl|cdd|84452 : 97.2) no description available & (reliability: 690.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold12126_2830-38684' '(at2g01540 : 209.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 3447 Blast hits to 2959 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 600; Plants - 764; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|36248 : 195.0) no description available & (gnl|cdd|84577 : 80.8) no description available & (reliability: 416.0) & (original description: Putative CAR7, Description = Protein C2-DOMAIN ABA-RELATED 7, PFAM = PF00168)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold12284_1693-4802' '(at4g14465 : 200.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 398.0) & (original description: Putative AHL20, Description = AT-hook motif nuclear-localized protein 20, PFAM = PF03479)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold13020_20528-24556' '(at4g17900 : 243.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 184.0) no description available & (reliability: 486.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold13781_30093-38138' '(at3g19130 : 421.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 90.5) no description available & (reliability: 790.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold14565_1389-11440' '(at5g58470 : 155.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 88.4) no description available & (reliability: 310.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00641;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15063_24702-37309' '(at5g16680 : 327.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15604_282-4976' '(at1g32540 : 153.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative LOL3, Description = Protein LOL3, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15996_34310-37303' '(at4g00840 : 156.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold16643_28536-34244' '(at1g56460 : 150.0) HIT zinc finger ;PAPA-1-like conserved region; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1). & (gnl|cdd|68370 : 106.0) no description available & (reliability: 300.0) & (original description: Putative PAPA1, Description = PAPA-1-like family protein, PFAM = PF04438;PF04795)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold18993_1370-3897' '(at3g48550 : 101.0) BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400018091, Description = OSIGBa0148P16.3 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold19066_16662-28794' '(at5g45550 : 389.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 316.0) no description available & (gnl|cdd|86392 : 243.0) no description available & (reliability: 766.0) & (original description: Putative mats, Description = MOB kinase activator 1B, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20361_18123-24835' '(at1g07360 : 603.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT2G29580.1); Has 18250 Blast hits to 13471 proteins in 794 species: Archae - 12; Bacteria - 1319; Metazoa - 6997; Fungi - 3518; Plants - 3570; Viruses - 267; Other Eukaryotes - 2567 (source: NCBI BLink). & (gnl|cdd|35375 : 464.0) no description available & (reliability: 1206.0) & (original description: Putative rbm22, Description = Pre-mRNA-splicing factor RBM22, PFAM = PF16131;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20397_5557-17320' '(at1g20110 : 473.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|85407 : 92.7) no description available & (reliability: 946.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF08416;PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20804_4804-22406' '(at2g30580 : 401.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 129.0) no description available & (reliability: 760.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold21033_21633-25377' '(at1g32540 : 162.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative LOL1, Description = Protein LOL1, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold21204_23156-26672' '(at1g64830 : 340.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 87.2) no description available & (reliability: 642.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold22022_9135-24112' '(at2g33835 : 96.7) Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.; FRIGIDA-ESSENTIAL 1 (FES1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of vernalization response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, vascular tissue, root tip; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 279 Blast hits to 165 proteins in 46 species: Archae - 0; Bacteria - 31; Metazoa - 18; Fungi - 38; Plants - 89; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400045292, Description = Zinc finger family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold22231_18766-25227' '(at3g48440 : 297.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 213.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 96.5) no description available & (reliability: 594.0) & (original description: Putative At3g48440, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold23921_1178-10558' '(at3g48440 : 328.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 221.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 113.0) no description available & (reliability: 656.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642;PF14608)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24265_22297-29425' '(at1g47500 : 429.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 130.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 858.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24796_9495-18297' '(at1g19860 : 119.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400003555, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24828_23084-28244' '(at4g26000 : 185.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 107.0) no description available & (reliability: 370.0) & (original description: Putative FLK, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold26608_16496-27103' '(at1g43850 : 458.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29020_13396-16746' '(at4g17900 : 332.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 196.0) no description available & (reliability: 664.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29241_14811-23400' '(at3g48050 : 998.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 234.0) no description available & (gnl|cdd|72853 : 189.0) no description available & (reliability: 1996.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29888_5162-14103' '(at2g28450 : 741.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, RNA methyltransferase activity, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), (Uracil-5)-methyltransferase (InterPro:IPR010280); BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1). & (gnl|cdd|37398 : 283.0) no description available & (gnl|cdd|32446 : 149.0) no description available & (reliability: 1482.0) & (original description: Putative At2g28450, Description = Zinc finger CCCH domain-containing protein 24, PFAM = PF05958;PF13847;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32168_1-5386' '(at1g06770 : 192.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative PGSC0003DMG400004205, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32470_16556-25249' '(at2g47850 : 369.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 346.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 738.0) & (original description: Putative Os01g0258700, Description = Zinc finger CCCH domain-containing protein 6, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32764_8172-14611' '(at2g47850 : 452.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 338.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 123.0) no description available & (reliability: 904.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32870_2873-11613' '(at2g20280 : 218.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 142.0) no description available & (gnl|cdd|34849 : 91.8) no description available & (reliability: 436.0) & (original description: Putative Zc3h15, Description = Zinc finger CCCH domain-containing protein 15, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold35057_4402-10124' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold35278_6390-13591' '(at5g11470 : 125.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At5g11470, Description = BnaA03g03350D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold36333_16287-19702' '(at1g25510 : 423.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 238.0) no description available & (reliability: 842.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold37247_10214-19511' '(at1g20110 : 419.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 89.0) no description available & (reliability: 838.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold39713_15659-18660' '(at2g23945 : 162.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G30030.1); Has 2014 Blast hits to 2006 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 70; Plants - 1675; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36553 : 116.0) no description available & (reliability: 324.0) & (original description: Putative , Description = , PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40306_12327-22472' '(at1g64260 : 134.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 268.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF10551;PF03108;PF04434;PF00564)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40424_12739-17287' '(at1g45207 : 187.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40516_6070-10175' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 464.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1050.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40737_1-19071' '(at5g40660 : 220.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 128.0) no description available & (gnl|cdd|70990 : 125.0) no description available & (reliability: 440.0) & (original description: Putative At5g40660, Description = Putative ovule protein, PFAM = PF07542)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40827_5481-11436' '(at5g40660 : 363.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 253.0) no description available & (gnl|cdd|70990 : 142.0) no description available & (reliability: 726.0) & (original description: Putative OJ1003_C06.132, Description = Os07g0644000 protein, PFAM = PF07542)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold42777_6051-18141' '(at3g12680 : 507.0) Member of the floral homeotic AGAMOUS pathway.; ENHANCER OF AG-4 1 (HUA1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G47850.3); Has 2136 Blast hits to 795 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 89; Plants - 1572; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (q9swf9|zfnl_pea : 187.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (gnl|cdd|36890 : 93.5) no description available & (reliability: 1014.0) & (original description: Putative HUA1, Description = Zinc finger CCCH domain-containing protein 37, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43008_670-9648' '(at5g54310 : 354.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 178.0) no description available & (gnl|cdd|85433 : 156.0) no description available & (reliability: 708.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43494_10047-15650' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.2) no description available & (reliability: 314.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43494_10267-15169' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 83.3) no description available & (reliability: 314.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold44626_4292-17050' '(at2g02070 : 282.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold45460_8698-15513' '(at5g23290 : 201.0) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38258 : 156.0) no description available & (gnl|cdd|29840 : 96.5) no description available & (reliability: 402.0) & (original description: Putative pfd5, Description = Putative prefoldin subunit 5, PFAM = PF02996)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold45559_10856-16219' '(at1g04500 : 176.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.6) no description available & (reliability: 352.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold47963_1234-7204' '(at5g13240 : 322.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 167.0) no description available & (gnl|cdd|38314 : 151.0) no description available & (reliability: 644.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold48421_4287-9423' '(at1g01160 : 86.7) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold49267_2490-6299' '(at3g45260 : 298.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative IDD4, Description = Protein indeterminate-domain 4, chloroplastic, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold49492_4456-15380' '(at1g69710 : 860.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 25088 Blast hits to 10396 proteins in 690 species: Archae - 87; Bacteria - 2712; Metazoa - 10178; Fungi - 1575; Plants - 3087; Viruses - 5; Other Eukaryotes - 7444 (source: NCBI BLink). & (gnl|cdd|34783 : 131.0) no description available & (gnl|cdd|36640 : 102.0) no description available & (reliability: 1684.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold50457_1-9205' '(at1g01930 : 427.0) zinc finger protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 1975 Blast hits to 1659 proteins in 367 species: Archae - 3; Bacteria - 303; Metazoa - 582; Fungi - 382; Plants - 105; Viruses - 11; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|37716 : 378.0) no description available & (reliability: 854.0) & (original description: Putative Os04g0574600, Description = Os04g0574600 protein, PFAM = PF13857)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold54978_1525-7773' '(at2g02160 : 284.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 169.0) no description available & (reliability: 568.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold56348_950-13016' '(at1g19860 : 222.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative At1g19860, Description = Zinc finger CCCH domain-containing protein 6, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold56720_8640-12835' '(at1g64260 : 181.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 95.8) no description available & (reliability: 362.0) & (original description: Putative Sb08g020220, Description = Putative uncharacterized protein Sb08g020220, PFAM = PF03108;PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold57443_19713-22917' '(at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold60037_1-5593' '(p93788|remo_soltu : 103.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 97.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold60198_8708-11823' '(at5g07900 : 154.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36481 : 102.0) no description available & (gnl|cdd|66247 : 93.1) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold62127_2920-11321' '(at1g43850 : 564.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold63180_6945-10050' '(at1g58330 : 144.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p23923|hbp1b_wheat : 87.4) Transcription factor HBP-1b(c38) - Triticum aestivum (Wheat) & (reliability: 288.0) & (original description: Putative PGSC0003DMG400011102, Description = DOG1 domain-containing protein, PFAM = PF14144)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold63293_1576-10931' '(at2g30580 : 410.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 126.0) no description available & (reliability: 774.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold65184_1782-7384' '(at1g53860 : 296.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|67381 : 100.0) no description available & (reliability: 592.0) & (original description: Putative BnaCnng57840D, Description = BnaCnng57840D protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold66919_7166-10059' '(at1g20110 : 161.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 163.2) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold68436_1-7937' '(at4g21430 : 404.0) B160; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 965 Blast hits to 873 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 24; Plants - 623; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|36570 : 248.0) no description available & (reliability: 808.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF08879;PF02373)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold77643_1529-5241' '(at3g60400 : 532.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G06810.1); Has 395 Blast hits to 388 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1064.0) & (original description: Putative MTERF18, Description = Transcription termination factor MTEF18, mitochondrial, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold78059_4088-7550' '(at5g66730 : 289.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold81250_4030-6917' '(at4g38160 : 434.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 129.0) no description available & (gnl|cdd|66247 : 125.0) no description available & (reliability: 868.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold81378_2773-6227' '(at3g18490 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 239.0) no description available & (gnl|cdd|84452 : 89.5) no description available & (reliability: 964.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold91268_1-4827' '(at3g63140 : 584.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 84.6) no description available & (reliability: 1168.0) & (original description: Putative csp41, Description = MRNA-binding protein, PFAM = PF01370)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold92387_1-5066' '(at1g70150 : 390.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893); Has 188 Blast hits to 183 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 18; Plants - 88; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative At1g70150, Description = Zinc ion binding protein, PFAM = PF01753)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold96338_1754-4508' '(at1g64260 : 113.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold97774_1-4162' '(at1g03840 : 285.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold105250_1-3368' '(at1g49920 : 110.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 216.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold106441_1-3304' '(at5g58760 : 358.0) Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.; damaged DNA binding 2 (DDB2); FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Zinc finger, CCHC-type (InterPro:IPR001878), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DROUGHT SENSITIVE 1 (TAIR:AT1G80710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39529 : 184.0) no description available & (reliability: 716.0) & (original description: Putative DDB2, Description = Protein DAMAGED DNA-BINDING 2, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold107_623374-635072' '(at1g07705 : 650.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 96.2) no description available & (reliability: 1242.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold122_214907-237940' '(at3g04970 : 521.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36526 : 271.0) no description available & (gnl|cdd|34870 : 96.6) no description available & (reliability: 1042.0) & (original description: Putative PAT17, Description = Probable protein S-acyltransferase 17, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold131_851822-854920' '(at4g17900 : 304.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 188.0) no description available & (reliability: 608.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold133_304913-309475' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold283_877439-880212' '(at1g11650 : 146.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 84.3) no description available & (reliability: 292.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold293_308164-312722' '(at1g21150 : 137.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 112.0) no description available & (gnl|cdd|36481 : 90.9) no description available & (reliability: 274.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold426_486252-498884' '(at2g47850 : 297.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 225.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 81.9) no description available & (reliability: 594.0) & (original description: Putative C3H35, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold459_326685-338852' '(at4g26000 : 361.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 158.0) no description available & (reliability: 722.0) & (original description: Putative FLK, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold509_708876-713444' '(at4g17900 : 313.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 195.0) no description available & (reliability: 626.0) & (original description: Putative BnaC08g07590D, Description = BnaC08g07590D protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold527_675270-680735' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 98.2) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold587_232306-238482' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 308.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF00564;PF04434;PF03108)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold684_13548-17896' '(at1g64260 : 105.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold740_492019-499412' '(at5g45550 : 422.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 335.0) no description available & (gnl|cdd|86392 : 257.0) no description available & (reliability: 820.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold776_173983-182187' '(at1g20110 : 433.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 89.7) no description available & (reliability: 866.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold798_24646-35661' '(p93788|remo_soltu : 98.2) Remorin (pp34) - Solanum tuberosum (Potato) & (at5g23750 : 84.3) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G48940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold904_122565-126679' '(at2g33640 : 221.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PAT19, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold914_177327-196303' '(at1g64830 : 263.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 165.0) no description available & (reliability: 506.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1287_119784-130540' '(at5g54310 : 220.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 168.0) no description available & (gnl|cdd|85433 : 146.0) no description available & (reliability: 440.0) & (original description: Putative smap1, Description = ArfGap-domain-containing protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1293_48480-53658' '(at1g15910 : 494.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 166.0) no description available & (reliability: 966.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03469;PF03470)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1341_19045-28121' '(at3g48670 : 421.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 165.0) no description available & (reliability: 758.0) & (original description: Putative FDM3, Description = Putative domain XH, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1553_273586-276590' '(at4g00840 : 133.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1653_122435-127461' '(at3g21100 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative At3g21100, Description = Putative uncharacterized protein At3g21100, PFAM = PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1703_208059-212313' '(at5g66730 : 273.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1745_92086-98613' '(gnl|cdd|36553 : 116.0) no description available & (at5g10760 : 114.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1757_39033-44938' '(at5g06250 : 179.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 358.0) & (original description: Putative ABI2, Description = B3 DNA-binding domain protein, PFAM = PF02362)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1895_156554-180562' '(at4g38170 : 536.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1072.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1897_250874-259950' '(at3g21810 : 113.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative pco137268b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1912_15012-20200' '(at3g17611 : 285.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 125.0) no description available & (reliability: 570.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF00641;PF01694)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1912_371313-379988' '(at4g15080 : 755.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G22180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36525 : 145.0) no description available & (gnl|cdd|65336 : 93.4) no description available & (reliability: 1510.0) & (original description: Putative PAT19, Description = Probable protein S-acyltransferase 19, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2031_369460-374604' '(at5g03500 : 154.0) Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03220.1). & (gnl|cdd|35790 : 119.0) no description available & (gnl|cdd|69503 : 112.0) no description available & (reliability: 308.0) & (original description: Putative Med7, Description = Putative Mediator of RNA polymerase II transcription subunit, PFAM = PF05983)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2049_298212-306155' '(at5g56930 : 145.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2091_217467-219988' '(at4g00840 : 81.3) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2253_22060-47481' '(gnl|cdd|72855 : 170.0) no description available & (at5g11470 : 160.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative BnaA03g03350D, Description = Putative ovule protein, PFAM = PF00076;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2314_279011-300301' '(at4g20380 : 114.0) LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge; LSD1 zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 317 Blast hits to 247 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHS4, Description = Protein LSD1, PFAM = PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2345_191881-194765' '(at2g34620 : 351.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G03050.1); Has 1033 Blast hits to 730 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|66247 : 157.0) no description available & (gnl|cdd|36481 : 90.2) no description available & (reliability: 702.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2625_157747-167296' '(at4g21610 : 110.0) Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.; lsd one like 2 (LOL2); CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 291 Blast hits to 191 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOL1, Description = AtLOL1, PFAM = PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2672_222846-228570' '(at1g06770 : 189.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative glysoja_002556, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2721_108928-132694' '(gnl|cdd|38246 : 168.0) no description available & (gnl|cdd|80055 : 158.0) no description available & (at5g12980 : 156.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT3G20800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PIM1, Description = Phytochrome interacting molecule 1, PFAM = PF04078;PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2745_96368-105078' '(at2g20280 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 249.0) no description available & (gnl|cdd|34849 : 149.0) no description available & (reliability: 704.0) & (original description: Putative dfrp1, Description = Translation machinery-associated protein 46, PFAM = PF16543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2849_71770-80211' '(at5g56930 : 134.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2904_3626-13785' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 292.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF04434;PF10551;PF03108;PF00564)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2922_18534-28438' '(at5g13240 : 333.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 170.0) no description available & (gnl|cdd|38314 : 157.0) no description available & (reliability: 666.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2990_162637-166028' '(gnl|cdd|39379 : 127.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 93.2) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 82.8) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 173.4) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3000_230926-233855' '(at2g36000 : 227.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 114.0) no description available & (gnl|cdd|36481 : 89.0) no description available & (reliability: 454.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3000_230974-233858' '(at2g36000 : 223.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 112.0) no description available & (gnl|cdd|36481 : 87.1) no description available & (reliability: 446.0) & (original description: Putative At2g36000, Description = Mitochondrial transcription termination factor, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3211_287579-291853' '(at4g20380 : 154.0) LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge; LSD1 zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 317 Blast hits to 247 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative LOL2, Description = Protein LOL2, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3435_34313-39783' '(at5g40660 : 135.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 120.0) no description available & (reliability: 270.0) & (original description: Putative At5g40660, Description = Putative ovule protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3459_110-6529' '(at1g09920 : 236.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3871_202969-206084' '(at5g64950 : 151.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 107.0) no description available & (gnl|cdd|66247 : 98.5) no description available & (reliability: 302.0) & (original description: Putative PGSC0003DMG400027538, Description = Putative ovule protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4004_70285-79832' '(at5g19350 : 389.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29846 Blast hits to 17541 proteins in 840 species: Archae - 12; Bacteria - 2412; Metazoa - 15092; Fungi - 3490; Plants - 6065; Viruses - 0; Other Eukaryotes - 2775 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (reliability: 778.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4495_56415-59122' '(at5g59550 : 84.7) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4577_36428-55032' '(at2g45640 : 179.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 168.0) no description available & (gnl|cdd|38601 : 145.0) no description available & (reliability: 358.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5540_44769-49916' '(at3g56330 : 428.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT5G15810.1); Has 951 Blast hits to 937 proteins in 347 species: Archae - 257; Bacteria - 66; Metazoa - 191; Fungi - 140; Plants - 103; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|36467 : 232.0) no description available & (gnl|cdd|32052 : 195.0) no description available & (reliability: 856.0) & (original description: Putative trm1, Description = tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase Trm1, PFAM = PF02005)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5619_1-4220' '(at1g74120 : 369.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 15 (TAIR:AT5G54180.1); Has 926 Blast hits to 761 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative MTERF15, Description = Transcription termination factor MTERF15, mitochondrial, PFAM = PF02536;PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5661_10539-19686' '(at5g54310 : 368.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 188.0) no description available & (gnl|cdd|85433 : 157.0) no description available & (reliability: 736.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6181_34923-54861' '(at1g43850 : 488.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6271_102552-106963' '(at5g07030 : 486.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (reliability: 932.0) & (original description: Putative BnaA09g34280D, Description = BnaA09g34280D protein, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6403_70124-74073' '(at1g49920 : 96.7) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6764_44495-54435' '(at5g56900 : 597.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37687 : 400.0) no description available & (gnl|cdd|86708 : 131.0) no description available & (reliability: 1194.0) & (original description: Putative At5g56900, Description = Putative ovule protein, PFAM = PF04677;PF04676)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6919_11400-24219' '(at5g16680 : 355.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 174.0) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold7303_41785-51047' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 137.0) no description available & (gnl|cdd|37097 : 124.0) no description available & (reliability: 606.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8112_9088-16352' '(at3g26935 : 568.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 234.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1136.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8202_23412-27704' '(at1g01160 : 85.9) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8233_4343-7877' '(at1g01300 : 556.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 266.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1026.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8595_1433-9334' '(p82277|rrp2_spiol : 265.0) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (at3g52150 : 259.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 33 (TAIR:AT3G52380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35346 : 90.2) no description available & (reliability: 518.0) & (original description: Putative At3g52150, Description = Putative uncharacterized protein At3g52150, PFAM = PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold9022_896-4143' '(at2g02080 : 253.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IDD4, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold9138_1754-5916' '(at1g64260 : 121.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00000877ctg015_1162-8177' '(at2g32080 : 419.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 214.0) no description available & (gnl|cdd|68420 : 105.0) no description available & (reliability: 838.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00001096ctg028_25353-29915' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00001384ctg018_15388-20162' '(at3g54826 : 156.0) Zim17-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 403 Blast hits to 403 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 127; Plants - 101; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38487 : 90.9) no description available & (gnl|cdd|72806 : 81.9) no description available & (reliability: 312.0) & (original description: Putative Os02g0819700, Description = Os02g0819700 protein, PFAM = PF05180)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00002208ctg002_1997-4650' '(at5g56930 : 94.7) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative PGSC0003DMG400014565, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00003381ctg002_2101-11357' '(at2g41835 : 317.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 172.0) no description available & (reliability: 634.0) & (original description: Putative SAP11, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11, PFAM = PF01428;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00003483ctg005_442-5356' '(at1g04500 : 172.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 84.9) no description available & (reliability: 344.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004133ctg003_875-4440' '(at5g06250 : 184.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 368.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004376ctg001_1-12378' '(at5g03500 : 185.0) Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03220.1). & (gnl|cdd|35790 : 144.0) no description available & (gnl|cdd|69503 : 134.0) no description available & (reliability: 370.0) & (original description: Putative med7, Description = Putative mediator complex subunit 7, PFAM = PF05983)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004829ctg009_2555-5178' '(p27484|grp2_nicsy : 129.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 87.3) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 191.8) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005580ctg002_14020-19424' '(at3g51950 : 230.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005768ctg000_1155-4267' '(at1g21150 : 106.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 81.9) no description available & (reliability: 212.0) & (original description: Putative PGSC0003DMG400031415, Description = Putative ovule protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005769ctg013_1-5695' '(at1g65260 : 352.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q03943|im30_pea : 346.0) Membrane-associated 30 kDa protein, chloroplast precursor (M30) - Pisum sativum (Garden pea) & (gnl|cdd|32027 : 128.0) no description available & (reliability: 704.0) & (original description: Putative IM30, Description = Membrane-associated 30 kDa protein, chloroplastic, PFAM = PF04012)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005931ctg003_8396-18210' '(at3g48440 : 312.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 206.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 624.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF14608;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005969ctg015_1-4018' '(at3g06660 : 149.0) PAPA-1-like family protein / zinc finger (HIT type) family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1); Has 668 Blast hits to 539 proteins in 161 species: Archae - 0; Bacteria - 83; Metazoa - 198; Fungi - 84; Plants - 88; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|68370 : 98.6) no description available & (reliability: 298.0) & (original description: Putative BnaC09g07650D, Description = BnaC09g07650D protein, PFAM = PF04795;PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006054ctg001_475-4774' '(at5g66730 : 291.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006149ctg005_12924-16342' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 105.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 174.8) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF13637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006248ctg002_2070-6387' '(at5g66730 : 278.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006413ctg010_1-3168' '(at3g04570 : 202.0) AT-hook motif nuclear-localized protein 19 (AHL19); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 7030 Blast hits to 3903 proteins in 396 species: Archae - 17; Bacteria - 3505; Metazoa - 1173; Fungi - 108; Plants - 1514; Viruses - 84; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 404.0) & (original description: Putative AHL20, Description = AT-hook motif nuclear-localized protein 20, PFAM = PF03479)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008017ctg012_13360-23634' '(at5g36740 : 491.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008076ctg012_2093-6871' '(at1g23750 : 171.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ino1, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008590ctg000_1-8786' '(at3g21810 : 120.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative pco137268b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00009819ctg006_1-6400' '(at3g19130 : 400.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 87.0) no description available & (p19683|roc4_nicsy : 82.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 766.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010287ctg009_16890-22505' '(at3g09320 : 394.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G04270.1); Has 5137 Blast hits to 5129 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2212; Fungi - 755; Plants - 839; Viruses - 0; Other Eukaryotes - 1331 (source: NCBI BLink). & (gnl|cdd|36529 : 210.0) no description available & (gnl|cdd|34870 : 112.0) no description available & (reliability: 788.0) & (original description: Putative PAT16, Description = Probable protein S-acyltransferase 16, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010380ctg013_13513-17386' '(at2g39380 : 506.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86233 : 492.0) no description available & (gnl|cdd|37555 : 490.0) no description available & (reliability: 1006.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010399ctg010_9306-12286' '(at2g37550 : 325.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 231.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 640.0) & (original description: Putative v1g26599, Description = Predicted protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010620ctg000_1-5450' '(at3g26935 : 624.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 253.0) no description available & (gnl|cdd|34870 : 138.0) no description available & (reliability: 1248.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010662ctg008_3665-8521' '(gnl|cdd|38246 : 178.0) no description available & (at3g20800 : 162.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 162.0) no description available & (reliability: 324.0) & (original description: Putative CDP1, Description = Cell differentiation protein rcd1, PFAM = PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00011335ctg004_13705-24184' '(at1g43850 : 473.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00011865ctg008_3527-9582' '(at1g23750 : 134.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012077ctg012_1-1924' '(at1g64830 : 259.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (gnl|cdd|84452 : 83.0) no description available & (reliability: 508.0) & (original description: Putative BnaA08g07350D, Description = BnaA08g07350D protein, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012383ctg000_2764-6955' '(at1g49920 : 101.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012660ctg006_1-3753' '(at5g58470 : 158.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00013637ctg009_1968-6327' '(at4g02220 : 456.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 265.0) no description available & (gnl|cdd|67794 : 102.0) no description available & (reliability: 912.0) & (original description: Putative pdcd2, Description = Programmed cell death protein 2, PFAM = PF01753;PF04194)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00014124ctg003_1-4847' '(at4g24630 : 472.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 229.0) no description available & (gnl|cdd|34870 : 128.0) no description available & (reliability: 944.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00014695ctg011_8250-12176' '(at4g02990 : 658.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G44020.1); Has 1500 Blast hits to 957 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 3; Plants - 1315; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|66247 : 295.0) no description available & (gnl|cdd|36481 : 154.0) no description available & (reliability: 1316.0) & (original description: Putative MTERF4, Description = Transcription termination factor MTERF4, chloroplastic, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00016215ctg012_1-3019' '(at2g14255 : 259.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34870 : 105.0) no description available & (gnl|cdd|36525 : 101.0) no description available & (reliability: 518.0) & (original description: Putative TIP1, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00016791ctg002_30796-33891' '(at4g38160 : 434.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 130.0) no description available & (gnl|cdd|66247 : 126.0) no description available & (reliability: 868.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017061ctg005_2298-6245' '(at5g06810 : 435.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 870.0) & (original description: Putative BnaC09g32350D, Description = BnaC09g32350D protein, PFAM = PF02536;PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017084ctg001_7384-11862' '(at4g17900 : 333.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 193.0) no description available & (reliability: 666.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017675ctg008_4978-11210' '(at2g41835 : 308.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 166.0) no description available & (reliability: 616.0) & (original description: Putative SEF2, Description = Somatic embryogenesis zinc finger 2, PFAM = PF01428;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00018899ctg007_5607-9169' '(at3g62130 : 610.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|36762 : 318.0) no description available & (gnl|cdd|30866 : 120.0) no description available & (reliability: 1220.0) & (original description: Putative LCD, Description = L-cysteine desulfhydrase, PFAM = PF00266)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00019172ctg003_3725-7014' '(at5g37540 : 522.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 200.0) no description available & (reliability: 1044.0) & (original description: Putative At1g66180, Description = Putative ovule protein, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00019316ctg006_4290-8035' '(at5g13150 : 542.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 336.0) no description available & (reliability: 1084.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00020633ctg008_4421-8041' '(at3g58130 : 160.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 121.0) no description available & (reliability: 320.0) & (original description: Putative BnaA09g37280D, Description = Putative N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00021556ctg045_3203-8555' '(at2g02160 : 300.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 176.0) no description available & (reliability: 600.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF15663;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00022374ctg002_447-4184' '(at2g14255 : 268.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34870 : 101.0) no description available & (gnl|cdd|36525 : 97.6) no description available & (reliability: 536.0) & (original description: Putative PIGV, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00022632ctg016_1465-5745' '(p93788|remo_soltu : 162.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 126.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00023298ctg002_1821-6913' '(at5g40660 : 363.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 255.0) no description available & (gnl|cdd|70990 : 143.0) no description available & (reliability: 726.0) & (original description: Putative Sb02g041060, Description = Putative uncharacterized protein Sb02g041060, PFAM = PF07542)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00023656ctg004_17699-23588' '(at1g30320 : 285.0) Remorin family protein; FUNCTIONS IN: DNA binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 12397 Blast hits to 7447 proteins in 1066 species: Archae - 25; Bacteria - 2897; Metazoa - 2750; Fungi - 978; Plants - 862; Viruses - 38; Other Eukaryotes - 4847 (source: NCBI BLink). & (gnl|cdd|67381 : 100.0) no description available & (reliability: 570.0) & (original description: Putative BnaC03g59630D, Description = BnaC03g59630D protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00024269ctg006_3282-7291' '(at2g20280 : 157.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 132.0) no description available & (gnl|cdd|34849 : 84.5) no description available & (reliability: 314.0) & (original description: Putative 22194, Description = Zinc finger CCCH domain-containing protein 11, PFAM = PF16543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025209ctg010_565-6299' '(at1g11650 : 297.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35353 : 89.6) no description available & (p28644|roc1_spiol : 85.5) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 594.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025873ctg002_1-8124' '(at5g16680 : 337.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025970ctg000_1260-7430' '(at4g00840 : 268.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|36529 : 202.0) no description available & (gnl|cdd|34870 : 116.0) no description available & (reliability: 536.0) & (original description: Putative PAT12, Description = Probable protein S-acyltransferase 12, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025992ctg001_7344-21410' '(gnl|cdd|72855 : 205.0) no description available & (at5g11470 : 197.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative pco136762b, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00027690ctg010_8472-14321' '(at2g39830 : 606.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 222.0) no description available & (reliability: 1212.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030018ctg004_1640-11451' '(at2g39830 : 520.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 186.0) no description available & (reliability: 1040.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF00412;PF12315;PF12315)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030025ctg001_28614-31641' '(at4g14465 : 190.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 346.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030662ctg021_34080-39141' '(at2g05160 : 463.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030685ctg009_13091-19169' '(at1g49920 : 142.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.6) no description available & (reliability: 280.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF00564;PF03108;PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030940ctg014_494-7664' '(at3g19130 : 423.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 93.2) no description available & (reliability: 798.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00031036ctg001_16736-25281' '(at3g21480 : 341.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37254 : 158.0) no description available & (reliability: 682.0) & (original description: Putative , Description = Mitochondrial substrate carrier family protein ucpB, PFAM = PF16770)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00032243ctg022_10698-20172' '(at1g20110 : 359.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 87.4) no description available & (reliability: 718.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00032772ctg005_20162-22869' '(at5g59550 : 84.3) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00033034ctg000_1-5390' '(at5g61190 : 273.0) putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 3024 Blast hits to 2428 proteins in 238 species: Archae - 10; Bacteria - 118; Metazoa - 1187; Fungi - 140; Plants - 554; Viruses - 10; Other Eukaryotes - 1005 (source: NCBI BLink). & (gnl|cdd|86646 : 205.0) no description available & (reliability: 546.0) & (original description: Putative BnaA09g39750D, Description = BnaA09g39750D protein, PFAM = PF14418;PF01936)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035018ctg001_1-5057' '(at2g02160 : 268.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 171.0) no description available & (reliability: 536.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035147ctg005_6228-11877' '(at1g31040 : 244.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 177.0) no description available & (reliability: 488.0) & (original description: Putative Sb04g004830, Description = Putative uncharacterized protein Sb04g004830, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035380ctg003_21417-32312' '(at1g78540 : 534.0) Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor.; SH2 domain protein B (SHB); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: stem, flower, root, leaf; CONTAINS InterPro DOMAIN/s: SH2 motif (InterPro:IPR000980), STAT transcription factor, core (InterPro:IPR001217), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: SH2 domain protein A (TAIR:AT1G17040.1). & (reliability: 1068.0) & (original description: Putative SHB, Description = SH2 domain protein B, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035700ctg006_8541-11387' '(at1g51200 : 129.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 127.0) no description available & (q9llx1|isap1_orysa : 90.1) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039201ctg001_1-3650' '(at4g32720 : 242.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37066 : 93.6) no description available & (gnl|cdd|47984 : 85.2) no description available & (reliability: 484.0) & (original description: Putative LA1, Description = RNA-binding La domain-containing protein, PFAM = PF05383;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039364ctg008_7540-10033' '(at1g79220 : 341.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 154.0) no description available & (gnl|cdd|36481 : 101.0) no description available & (reliability: 682.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039750ctg019_5110-14357' '(at5g15810 : 876.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 622.0) no description available & (gnl|cdd|85826 : 352.0) no description available & (reliability: 1752.0) & (original description: Putative trmt1, Description = Putative tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00042937ctg005_3000-7919' '(at2g05160 : 343.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF12872;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00043398ctg002_214-5466' '(at5g63830 : 397.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39518 : 296.0) no description available & (reliability: 794.0) & (original description: Putative , Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00046380ctg002_1-5267' '(at5g54310 : 231.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 174.0) no description available & (gnl|cdd|85433 : 136.0) no description available & (reliability: 462.0) & (original description: Putative smap1, Description = ArfGap-domain-containing protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00046504ctg003_1469-8719' '(at1g07705 : 570.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 194.0) no description available & (gnl|cdd|37361 : 98.2) no description available & (reliability: 1058.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00047070ctg003_535-3943' '(at4g24015 : 85.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative RHA4A, Description = RING-H2 zinc finger protein RHA4a, PFAM = PF13639)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00048058ctg002_10926-16101' '(at5g54310 : 317.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 186.0) no description available & (gnl|cdd|85433 : 151.0) no description available & (reliability: 634.0) & (original description: Putative v1g130736, Description = Predicted protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00048350ctg001_1595-4701' '(at1g79220 : 344.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 155.0) no description available & (gnl|cdd|36481 : 101.0) no description available & (reliability: 688.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00049407ctg014_11920-17503' '(at4g27680 : 404.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 321.0) no description available & (gnl|cdd|30812 : 146.0) no description available & (p54774|cdc48_soybn : 109.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 808.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00050344ctg004_364-12741' '(at5g12350 : 831.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (gnl|cdd|34783 : 135.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1662.0) & (original description: Putative At5g12350, Description = Regulator of chromosome condensation-like protein with FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00052259ctg003_430-5272' '(at5g55580 : 525.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 119.0) no description available & (gnl|cdd|66247 : 100.0) no description available & (reliability: 1050.0) & (original description: Putative MTERF9, Description = Transcription termination factor MTERF9, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00053960ctg002_9805-15518' '(at1g75340 : 119.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 238.0) & (original description: Putative NbCG1b, Description = Nuclear pore complex protein CG1b, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00054677ctg002_12663-17629' '(at3g13810 : 292.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 552.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00055743ctg001_6174-13229' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 141.0) no description available & (gnl|cdd|31068 : 93.6) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 848.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00056520ctg000_548-9399' '(at3g48050 : 1028.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 246.0) no description available & (gnl|cdd|72853 : 188.0) no description available & (reliability: 2056.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00057914ctg002_1-600' '(at4g26000 : 98.2) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative FLK, Description = K Homology domain-containing protein, PFAM = PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00057914ctg003_2891-8342' '(at4g26000 : 318.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 112.0) no description available & (reliability: 636.0) & (original description: Putative FLK, Description = Poly(RC)-binding protein, putative, PFAM = PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00059466ctg000_955-6722' '(at1g03840 : 324.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative IDD2, Description = Protein indeterminate-domain 2, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101ctg15646_1-4670' '(at2g30580 : 186.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101ctg16134_499-7003' '(at1g09920 : 236.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00051_31911-45531' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (p28644|roc1_spiol : 86.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 848.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00066_499988-503276' '(at1g64260 : 99.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative Sb07g022850, Description = Putative ovule protein, PFAM = PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00073_556921-564547' '(at1g29800 : 618.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37054 : 418.0) no description available & (gnl|cdd|32754 : 142.0) no description available & (reliability: 1236.0) & (original description: Putative At1g29800, Description = Putative uncharacterized protein At1g29800, PFAM = PF01363;PF04366)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00104_190843-208553' '(at1g06770 : 285.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37871 : 138.0) no description available & (reliability: 570.0) & (original description: Putative Os03g0798200, Description = Os03g0798200 protein, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00109_448945-455054' '(at5g13990 : 550.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 458.0) no description available & (gnl|cdd|86233 : 344.0) no description available & (reliability: 1044.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00109_572107-577188' '(at4g14605 : 524.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1482 Blast hits to 884 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 1279; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|66247 : 126.0) no description available & (gnl|cdd|36481 : 98.6) no description available & (reliability: 1048.0) & (original description: Putative MTERF5, Description = Transcription termination factor MTERF5, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00110_568781-574192' '(at4g01730 : 374.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G33640.1); Has 4882 Blast hits to 4865 proteins in 242 species: Archae - 0; Bacteria - 0; Metazoa - 2140; Fungi - 628; Plants - 869; Viruses - 0; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|36525 : 134.0) no description available & (gnl|cdd|34870 : 93.2) no description available & (reliability: 748.0) & (original description: Putative PAT18, Description = Protein S-acyltransferase 18, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00116_122260-127710' '(at4g21430 : 277.0) B160; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 965 Blast hits to 873 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 24; Plants - 623; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|36570 : 157.0) no description available & (reliability: 554.0) & (original description: Putative glysoja_028624, Description = Lysine-specific demethylase 3B, putative isoform 1, PFAM = PF08879)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00163_1208547-1212043' '(at5g19910 : 218.0) MED31; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med31 (InterPro:IPR008831). & (gnl|cdd|69205 : 163.0) no description available & (gnl|cdd|39289 : 123.0) no description available & (reliability: 436.0) & (original description: Putative MED31, Description = Mediator of RNA polymerase II transcription subunit 31, PFAM = PF05669)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00163_1272825-1275730' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00240_436498-442100' '(at1g53860 : 290.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|67381 : 95.4) no description available & (reliability: 580.0) & (original description: Putative BnaCnng57840D, Description = BnaCnng57840D protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00264_371573-374744' '(at1g21000 : 291.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86704 : 194.0) no description available & (reliability: 582.0) & (original description: Putative BnaC08g07590D, Description = BnaC08g07590D protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00271_171163-174680' '(at5g45120 : 585.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G16563.1); Has 2287 Blast hits to 2274 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 201; Plants - 1822; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|36553 : 174.0) no description available & (reliability: 1170.0) & (original description: Putative At5g45120, Description = Aspartyl protease family protein, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00271_841425-845705' '(at1g32540 : 152.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative LOL3, Description = Protein LOL3, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00288_679039-682289' '(at5g58430 : 799.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein B1 (EXO70B1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B2 (TAIR:AT1G07000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 549.0) no description available & (gnl|cdd|86233 : 521.0) no description available & (reliability: 1598.0) & (original description: Putative EXO70B1, Description = Exocyst complex component EXO70B1, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00290_250099-262377' '(at5g19420 : 1472.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 2944.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF16627;PF16457;PF08381;PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00313_889925-901938' '(gnl|cdd|38246 : 193.0) no description available & (at3g20800 : 181.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 174.0) no description available & (reliability: 362.0) & (original description: Putative PIM1, Description = Cell differentiation protein rcd1, putative, expressed, PFAM = PF04078;PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00321_177412-184697' '(at3g19130 : 411.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 90.9) no description available & (p19683|roc4_nicsy : 81.6) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00339_1371044-1374464' '(at3g28917 : 102.0) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 96.5) no description available & (reliability: 204.0) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_184083-187204' '(at1g21150 : 135.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 103.0) no description available & (gnl|cdd|66247 : 103.0) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400006304, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_202028-205110' '(at5g07900 : 147.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 110.0) no description available & (gnl|cdd|36481 : 99.4) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_214524-218740' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 96.7) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400006304, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_215628-218643' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 97.5) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_218947-222086' '(at5g07900 : 134.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 100.0) no description available & (gnl|cdd|36481 : 90.2) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00349_635924-642178' '(at5g10770 : 450.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 220.0) no description available & (gnl|cdd|84452 : 94.9) no description available & (q6yny7|asp1_orysa : 80.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-2, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00366_1155121-1161583' '(at1g67325 : 304.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1). & (reliability: 608.0) & (original description: Putative At1g67325, Description = RanBP2-type zinc finger protein At1g67325, PFAM = PF00641;PF00641;PF00641)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00369_81833-87677' '(at3g50700 : 270.0) zinc finger protein, similar to maize Indeterminate1 (ID1); indeterminate(ID)-domain 2 (IDD2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 54862 Blast hits to 20312 proteins in 388 species: Archae - 0; Bacteria - 661; Metazoa - 50262; Fungi - 473; Plants - 881; Viruses - 5; Other Eukaryotes - 2580 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative IDD2, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00369_2551967-2557180' '(at4g11060 : 271.0) mitochondrially targeted single-stranded DNA binding protein (MTSSB); FUNCTIONS IN: single-stranded DNA binding; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18580.1); Has 3842 Blast hits to 3842 proteins in 1060 species: Archae - 0; Bacteria - 2446; Metazoa - 112; Fungi - 0; Plants - 68; Viruses - 25; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|36866 : 155.0) no description available & (reliability: 542.0) & (original description: Putative At4g11060, Description = Single-stranded DNA-binding protein, mitochondrial, PFAM = PF00436)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00421_17902-24158' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 308.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF04434;PF03108)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00435_560161-584811' '(at3g20800 : 513.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 430.0) no description available & (gnl|cdd|38246 : 426.0) no description available & (reliability: 1026.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00479_195117-207684' '(at1g07840 : 227.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38327 : 94.8) no description available & (reliability: 454.0) & (original description: Putative At1g07840, Description = AT1G07840 protein, PFAM = PF04000)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00479_381213-386058' '(at1g23750 : 175.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_44125-48523' '(at2g39380 : 512.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|37555 : 498.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (reliability: 1002.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_45061-48445' '(at3g55150 : 293.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|37555 : 287.0) no description available & (gnl|cdd|86233 : 276.0) no description available & (reliability: 586.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_1246624-1250433' '(at3g45260 : 274.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00496_40065-49483' '(at2g20280 : 351.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 246.0) no description available & (gnl|cdd|34849 : 151.0) no description available & (reliability: 702.0) & (original description: Putative dfrp1, Description = Translation machinery-associated protein 46, PFAM = PF16543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00505_124997-134437' '(at2g47850 : 377.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 355.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 109.0) no description available & (reliability: 754.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00509_34608-86140' '(at3g45260 : 320.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative IDD9, Description = Protein indeterminate-domain 9, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00539_843501-847053' '(at5g27280 : 201.0) Zim17-type zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT1G68730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38487 : 107.0) no description available & (gnl|cdd|72806 : 98.4) no description available & (reliability: 402.0) & (original description: Putative ZFP130, Description = Transcription factor ZFP130, PFAM = PF05180)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00542_815086-818375' '(at5g37540 : 527.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 201.0) no description available & (reliability: 1054.0) & (original description: Putative At5g37540, Description = AT5g37540/mpa22_p_70, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00555_49401-55217' '(at2g36930 : 180.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); Has 726 Blast hits to 418 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 301; Fungi - 225; Plants - 112; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38618 : 95.9) no description available & (reliability: 360.0) & (original description: Putative Os08g0564500, Description = Os08g0564500 protein, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00613_637916-641368' '(at1g58330 : 147.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (o24160|tga21_tobac : 88.2) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 294.0) & (original description: Putative PGSC0003DMG400004453, Description = DOG1 domain-containing protein, PFAM = PF14144)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00683_46281-53309' '(at2g05160 : 350.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00712_671002-677673' '(at2g33640 : 555.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink). & (gnl|cdd|36525 : 151.0) no description available & (gnl|cdd|65336 : 92.3) no description available & (reliability: 1110.0) & (original description: Putative PAT21, Description = Protein S-acyltransferase 21, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00713_458144-468047' '(at3g53710 : 420.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 6 (AGD6); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 (TAIR:AT2G37550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 293.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 840.0) & (original description: Putative AGD6, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD6, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00725_298420-301874' '(at3g18490 : 491.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 237.0) no description available & (gnl|cdd|84452 : 88.4) no description available & (reliability: 982.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00735_615479-624123' '(at2g41835 : 322.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 178.0) no description available & (reliability: 644.0) & (original description: Putative SAP16, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16, PFAM = PF01428;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00755_97246-101441' '(at1g64260 : 179.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 95.0) no description available & (reliability: 358.0) & (original description: Putative Sb08g020220, Description = Putative uncharacterized protein Sb08g020220, PFAM = PF03108;PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00761_538944-541369' '(at3g12630 : 106.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 92.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 88.6) no description available & (reliability: 212.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00820_340624-350747' '(at1g65260 : 370.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q8s0j7|im30_orysa : 340.0) Probable membrane-associated 30 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|32027 : 145.0) no description available & (reliability: 740.0) & (original description: Putative VIPP1, Description = Membrane-associated protein VIPP1, chloroplastic, PFAM = PF04012)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00859_177166-181104' '(at3g26935 : 251.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 172.0) no description available & (gnl|cdd|34870 : 109.0) no description available & (reliability: 502.0) & (original description: Putative PAT05, Description = Palmitoyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00859_177244-180269' '(at3g26935 : 154.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 102.0) no description available & (gnl|cdd|34870 : 82.4) no description available & (reliability: 308.0) & (original description: Putative PAT05, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00867_116903-121346' '(at5g07030 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 194.0) no description available & (reliability: 926.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00876_26538-30022' '(at1g01300 : 541.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 252.0) no description available & (gnl|cdd|84452 : 106.0) no description available & (reliability: 1006.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00941_304807-307922' '(at5g64950 : 154.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 103.0) no description available & (gnl|cdd|66247 : 100.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00960_341234-359081' '(at1g77930 : 280.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35934 : 85.1) no description available & (reliability: 560.0) & (original description: Putative At1g77930, Description = At1g77930, PFAM = PF00226)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00994_774162-779034' '(at1g64260 : 128.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 92.7) no description available & (reliability: 256.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01001_12791-18224' '(at3g51950 : 245.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative At3g51950, Description = Zinc finger CCCH domain-containing protein 46, PFAM = PF00076;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01017_656385-661299' '(at1g04500 : 171.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 85.3) no description available & (reliability: 342.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_508050-520656' '(at2g37520 : 842.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G53680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1684.0) & (original description: Putative At2g37520, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein, PFAM = PF16135;PF16135)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_721623-728601' '(at2g37550 : 383.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 271.0) no description available & (gnl|cdd|85433 : 139.0) no description available & (reliability: 758.0) & (original description: Putative BnaC04g27040D, Description = BnaC04g27040D protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_1321744-1327746' '(at3g09320 : 395.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G04270.1); Has 5137 Blast hits to 5129 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2212; Fungi - 755; Plants - 839; Viruses - 0; Other Eukaryotes - 1331 (source: NCBI BLink). & (gnl|cdd|36529 : 213.0) no description available & (gnl|cdd|34870 : 115.0) no description available & (reliability: 790.0) & (original description: Putative PAT16, Description = Probable protein S-acyltransferase 16, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01027_61673-66677' '(at1g64260 : 154.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 82.3) no description available & (reliability: 308.0) & (original description: Putative At3g06940, Description = Putative mudrA protein, PFAM = PF00564;PF04434;PF03108;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01042_260848-266761' '(at1g30320 : 251.0) Remorin family protein; FUNCTIONS IN: DNA binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 12397 Blast hits to 7447 proteins in 1066 species: Archae - 25; Bacteria - 2897; Metazoa - 2750; Fungi - 978; Plants - 862; Viruses - 38; Other Eukaryotes - 4847 (source: NCBI BLink). & (gnl|cdd|67381 : 97.7) no description available & (reliability: 502.0) & (original description: Putative BnaC03g59630D, Description = BnaC03g59630D protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01055_206395-210500' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 463.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1050.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01109_446727-450387' '(at5g54180 : 464.0) plastid transcriptionally active 15 (PTAC15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G14605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 97.5) no description available & (gnl|cdd|66247 : 85.4) no description available & (reliability: 928.0) & (original description: Putative MTERF8, Description = Transcription termination factor MTERF8, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01143_1264720-1268639' '(at5g61010 : 476.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 397.0) no description available & (gnl|cdd|86233 : 286.0) no description available & (reliability: 952.0) & (original description: Putative EXO70E2, Description = AT5G61010 protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01155_164742-170575' '(at1g23750 : 174.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ino1, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01188_174132-177360' '(at5g64950 : 147.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 94.0) no description available & (gnl|cdd|66247 : 81.9) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400027540, Description = Putative ovule protein, PFAM = PF02536;PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01194_33607-50270' '(at4g27680 : 494.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 400.0) no description available & (gnl|cdd|30812 : 203.0) no description available & (p54774|cdc48_soybn : 154.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 988.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01241_793996-800209' '(at2g02070 : 291.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01243_339148-344658' '(at1g70150 : 454.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893); Has 188 Blast hits to 183 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 18; Plants - 88; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At1g70150, Description = Zinc ion binding protein, PFAM = PF01753)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01269_426979-433787' '(at4g27000 : 389.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01295_560782-571093' '(at5g18550 : 335.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 331.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 106.0) no description available & (reliability: 654.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01372_122068-124976' '(at2g36000 : 218.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 108.0) no description available & (gnl|cdd|36481 : 86.3) no description available & (reliability: 436.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01385_848406-855652' '(at1g47500 : 414.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 828.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01401_21584-27362' '(at2g45640 : 179.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 169.0) no description available & (gnl|cdd|38601 : 147.0) no description available & (reliability: 358.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01409_1319401-1326113' '(at1g07360 : 603.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT2G29580.1); Has 18250 Blast hits to 13471 proteins in 794 species: Archae - 12; Bacteria - 1319; Metazoa - 6997; Fungi - 3518; Plants - 3570; Viruses - 267; Other Eukaryotes - 2567 (source: NCBI BLink). & (gnl|cdd|35375 : 464.0) no description available & (reliability: 1206.0) & (original description: Putative rbm22, Description = Pre-mRNA-splicing factor RBM22, PFAM = PF00076;PF16131)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01432_603059-616285' '(at2g23380 : 828.0) Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.; CURLY LEAF (CLF); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT4G02020.1); Has 5951 Blast hits to 5285 proteins in 534 species: Archae - 0; Bacteria - 530; Metazoa - 2584; Fungi - 730; Plants - 989; Viruses - 16; Other Eukaryotes - 1102 (source: NCBI BLink). & (q8s4p6|ez1_maize : 781.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (gnl|cdd|36295 : 395.0) no description available & (gnl|cdd|47645 : 113.0) no description available & (reliability: 1656.0) & (original description: Putative CLF, Description = Histone-lysine N-methyltransferase CLF, PFAM = PF00856)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01453_944724-965052' '(at4g24630 : 496.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 237.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 992.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01455_211784-228310' '(at5g22480 : 694.0) ZPR1 zinc-finger domain protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, ZPR1-type (InterPro:IPR004457); BEST Arabidopsis thaliana protein match is: ZPR1 zinc-finger domain protein (TAIR:AT5G37340.3); Has 1143 Blast hits to 605 proteins in 280 species: Archae - 310; Bacteria - 0; Metazoa - 225; Fungi - 282; Plants - 53; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|37914 : 531.0) no description available & (gnl|cdd|47978 : 201.0) no description available & (reliability: 1364.0) & (original description: Putative zpr1, Description = Zinc finger protein ZPR1, PFAM = PF03367;PF03367)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01460_47227-51423' '(at1g68200 : 199.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01462_289172-292618' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01517_918360-922495' '(at1g33420 : 631.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 734 Blast hits to 722 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 264; Plants - 211; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|37055 : 131.0) no description available & (reliability: 1262.0) & (original description: Putative At1g33420, Description = PHD finger protein At1g33420, PFAM = PF00628)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01523_112862-118970' '(at5g63830 : 419.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39518 : 302.0) no description available & (reliability: 838.0) & (original description: Putative , Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01550_120298-130828' '(at4g27680 : 629.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 455.0) no description available & (gnl|cdd|30812 : 205.0) no description available & (p54774|cdc48_soybn : 165.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1258.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01553_245950-250498' '(at1g45207 : 187.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01559_368162-378195' '(at4g15080 : 748.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G22180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36525 : 145.0) no description available & (gnl|cdd|65336 : 93.1) no description available & (reliability: 1496.0) & (original description: Putative PAT19, Description = Probable protein S-acyltransferase 19, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01582_1310590-1319963' '(at1g32540 : 198.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative LOL1, Description = Protein LOL1, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01586_4384-8084' '(at1g64260 : 143.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 90.8) no description available & (reliability: 286.0) & (original description: Putative At1g06740, Description = Putative oxysterol-binding protein 5-like, PFAM = PF04434;PF03108;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01587_363476-370112' '(at3g18620 : 358.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 4961 Blast hits to 4959 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2163; Fungi - 692; Plants - 838; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|36527 : 186.0) no description available & (gnl|cdd|34870 : 91.2) no description available & (reliability: 716.0) & (original description: Putative PAT11, Description = Protein S-acyltransferase 11, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01599_288375-291478' '(at1g21150 : 155.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 109.0) no description available & (gnl|cdd|36481 : 92.5) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01612_207044-209421' '(at1g07130 : 161.0) Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping.; STN1; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: telomere capping; LOCATED IN: nuclear chromosome, telomeric region; EXPRESSED IN: root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); Has 110 Blast hits to 110 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 2; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72955 : 84.6) no description available & (reliability: 322.0) & (original description: Putative STN1, Description = CST complex subunit STN1, PFAM = PF01336)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01634_162721-172263' '(at3g57170 : 444.0) N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36397 : 303.0) no description available & (gnl|cdd|68593 : 174.0) no description available & (reliability: 888.0) & (original description: Putative BnaA09g36520D, Description = BnaA09g36520D protein, PFAM = PF05024)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01639_774812-781261' '(at1g03840 : 325.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_58673-63673' '(at4g00840 : 86.3) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_60669-71229' '(at4g00840 : 338.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|36529 : 214.0) no description available & (gnl|cdd|34870 : 122.0) no description available & (reliability: 676.0) & (original description: Putative PAT12, Description = Probable protein S-acyltransferase 12, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_63715-66612' '(gnl|cdd|36529 : 127.0) no description available & (at4g00840 : 119.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|34870 : 99.7) no description available & (reliability: 238.0) & (original description: Putative REAM, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_297992-302708' '(at2g45820 : 96.3) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 92.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 178.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01663_174-14473' '(at5g36740 : 473.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01664_364723-372908' '(at1g20110 : 438.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 95.5) no description available & (gnl|cdd|36940 : 82.8) no description available & (reliability: 876.0) & (original description: Putative FREE1, Description = Protein FREE1, PFAM = PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01671_574036-584886' '(at1g49920 : 140.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.9) no description available & (reliability: 274.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF04434;PF03108;PF10551;PF00564)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01697_1691193-1694956' '(at1g32540 : 177.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative lsd1, Description = Protein LSD1, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01718_800910-804636' '(gnl|cdd|36553 : 122.0) no description available & (at3g18490 : 119.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01735_243718-247223' '(at2g44020 : 715.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 1566 Blast hits to 959 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|66247 : 307.0) no description available & (gnl|cdd|36481 : 156.0) no description available & (reliability: 1430.0) & (original description: Putative mTRF1, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01739_449657-457717' '(at1g31040 : 246.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 176.0) no description available & (reliability: 492.0) & (original description: Putative Sb04g004830, Description = Putative uncharacterized protein Sb04g004830, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01749_470242-472757' '(gnl|cdd|38383 : 156.0) no description available & (at1g51200 : 155.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 104.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 310.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01754;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01773_716236-719773' '(at3g62130 : 606.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|36762 : 315.0) no description available & (gnl|cdd|30866 : 119.0) no description available & (reliability: 1212.0) & (original description: Putative LCD, Description = L-cysteine desulfhydrase, PFAM = PF00266)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01779_350532-365347' '(at4g26000 : 359.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 156.0) no description available & (reliability: 718.0) & (original description: Putative BnaC08g12060D, Description = BnaC08g12060D protein, PFAM = PF00013;PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01795_1252952-1260589' '(at1g43850 : 291.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01812_502437-514602' '(at1g08680 : 348.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.; ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2). & (gnl|cdd|35921 : 110.0) no description available & (gnl|cdd|85433 : 97.3) no description available & (reliability: 696.0) & (original description: Putative Os03g0323500, Description = Os03g0323500 protein, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01818_811449-817366' '(at3g26935 : 358.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 220.0) no description available & (gnl|cdd|34870 : 128.0) no description available & (reliability: 716.0) & (original description: Putative PAT06, Description = Probable protein S-acyltransferase 6, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01819_233475-238797' '(at2g02160 : 300.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 175.0) no description available & (reliability: 600.0) & (original description: Putative PGSC0003DMG400016400, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF00642;PF15663)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01819_239673-249933' '(at2g02170 : 345.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 3690 Blast hits to 2594 proteins in 496 species: Archae - 6; Bacteria - 904; Metazoa - 645; Fungi - 344; Plants - 595; Viruses - 5; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|67381 : 116.0) no description available & (reliability: 690.0) & (original description: Putative At1g30320, Description = Remorin family protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01822_1673427-1677651' '(at4g02220 : 167.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 127.0) no description available & (gnl|cdd|67794 : 97.6) no description available & (reliability: 334.0) & (original description: Putative PDCD2, Description = Programmed cell death protein 2, PFAM = PF04194)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01824_155806-161437' '(p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 95.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01826_239936-246081' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01826_733652-744990' '(at3g48440 : 334.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 224.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 117.0) no description available & (reliability: 668.0) & (original description: Putative BnaC03g51070D, Description = BnaC03g51070D protein, PFAM = PF14608;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01847_878226-880801' '(p27484|grp2_nicsy : 135.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 81.9) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 193.4) & (original description: Putative nab1, Description = Cold shock domain protein 1, PFAM = PF00313;PF00098)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01876_29903-43304' '(at2g30580 : 377.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 125.0) no description available & (reliability: 690.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01887_756672-763685' '(at1g47490 : 365.0) RNA-binding protein 47C (RBP47C); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C' (TAIR:AT1G47500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35370 : 127.0) no description available & (gnl|cdd|31068 : 96.3) no description available & (reliability: 730.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47C, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01933_1484873-1499941' '(at3g54826 : 153.0) Zim17-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 403 Blast hits to 403 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 127; Plants - 101; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38487 : 89.7) no description available & (gnl|cdd|72806 : 81.9) no description available & (reliability: 306.0) & (original description: Putative Os02g0819700, Description = Os02g0819700 protein, PFAM = PF05180)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01985_485236-490440' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 174.8) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01998_777379-781941' '(at1g03840 : 328.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02001_221571-229859' '(at1g20110 : 374.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 88.6) no description available & (reliability: 748.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02008_1567-4769' '(at1g55460 : 500.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (gnl|cdd|38048 : 313.0) no description available & (reliability: 1000.0) & (original description: Putative KIN, Description = DNA/RNA-binding protein KIN17, PFAM = PF10357)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02021_113584-118255' '(at3g63140 : 586.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 84.2) no description available & (reliability: 1172.0) & (original description: Putative CSP41A, Description = Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic, PFAM = PF01370)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02042_365543-371933' '(at1g03840 : 282.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02066_145401-154219' '(at3g48670 : 473.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 164.0) no description available & (reliability: 852.0) & (original description: Putative At5g59390, Description = Transcription regulator-like, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02164_617548-624263' '(at1g07840 : 232.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38327 : 99.0) no description available & (reliability: 464.0) & (original description: Putative At1g07840, Description = AT1G07840 protein, PFAM = PF04000)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02237_84746-89940' '(at4g38170 : 527.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1054.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02255_78968-82064' '(at1g64260 : 86.3) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02268_7420-15563' '(at4g39870 : 343.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT2G05590.2). & (gnl|cdd|37583 : 150.0) no description available & (gnl|cdd|87300 : 133.0) no description available & (reliability: 686.0) & (original description: Putative LOC100192992, Description = TLDc, PFAM = PF07534)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02272_23193-27111' '(at1g64260 : 150.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.9) no description available & (reliability: 300.0) & (original description: Putative Sb03g002010, Description = Putative uncharacterized protein Sb03g002010, PFAM = PF03108;PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02291_290273-305428' '(at1g77060 : 502.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G21440.1); Has 8811 Blast hits to 8811 proteins in 1498 species: Archae - 116; Bacteria - 4944; Metazoa - 32; Fungi - 514; Plants - 174; Viruses - 0; Other Eukaryotes - 3031 (source: NCBI BLink). & (q05957|cppm_diaca : 365.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|32583 : 257.0) no description available & (gnl|cdd|36474 : 193.0) no description available & (reliability: 1004.0) & (original description: Putative bcpA, Description = Carboxyvinyl-carboxyphosphonate phosphorylmutase, PFAM = PF13714)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02303_71017-81673' '(at1g07705 : 637.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 197.0) no description available & (gnl|cdd|37361 : 97.4) no description available & (reliability: 1220.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02354_1050028-1057743' '(at4g32720 : 358.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47984 : 82.2) no description available & (gnl|cdd|37066 : 80.9) no description available & (reliability: 716.0) & (original description: Putative Os02g0610400, Description = Os02g0610400 protein, PFAM = PF00076;PF08777;PF05383)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02360_109106-115983' '(at4g06634 : 379.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1). & (reliability: 758.0) & (original description: Putative pho, Description = Transcriptional repressor protein YY1, PFAM = PF00096;PF00096;PF00096;PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02361_344525-354443' '(at4g22910 : 643.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 472.0) no description available & (gnl|cdd|29257 : 138.0) no description available & (reliability: 1248.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02384_117731-121555' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02423_262410-276187' '(at3g21480 : 330.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37254 : 152.0) no description available & (reliability: 660.0) & (original description: Putative , Description = PAX-interacting protein 1, PFAM = PF16770)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02429_496904-500016' '(at1g21150 : 123.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 100.0) no description available & (gnl|cdd|66247 : 99.6) no description available & (reliability: 246.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02437_214992-234243' '(at1g75340 : 166.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 332.0) & (original description: Putative NbCG1b, Description = Nuclear pore complex protein CG1b, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02509_1070318-1072857' '(at3g12630 : 152.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 132.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 127.0) no description available & (reliability: 304.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02541_872239-879044' '(gnl|cdd|69947 : 441.0) no description available & (at4g21790 : 428.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative tom1, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02541_883577-886344' '(at4g27000 : 147.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 82.7) no description available & (reliability: 294.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02549_205194-224236' '(at2g02080 : 296.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative BnaA06g34340D, Description = BnaA06g34340D protein, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02583_690083-692913' '(at4g36020 : 91.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (gnl|cdd|84686 : 84.1) no description available & (reliability: 182.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00098;PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02615_61404-67923' '(at1g09920 : 230.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BnaC05g07400D, Description = TRAF-type zinc finger protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 162.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02659_318381-321682' '(at1g09750 : 452.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 197.0) no description available & (reliability: 904.0) & (original description: Putative cpa63, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02668_2335-7534' '(at5g12440 : 315.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G21100.2). & (reliability: 630.0) & (original description: Putative Os07g0682400, Description = Zinc finger CCCH domain-containing protein 53, PFAM = PF00642;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02700_168316-172055' '(at4g26400 : 84.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02720_1043379-1046638' '(at1g23280 : 229.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 217.0) no description available & (gnl|cdd|68448 : 209.0) no description available & (reliability: 458.0) & (original description: Putative v1g121253, Description = Predicted protein, PFAM = PF01778)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02723_35966-41331' '(at4g31540 : 254.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37555 : 236.0) no description available & (gnl|cdd|86233 : 209.0) no description available & (reliability: 508.0) & (original description: Putative TCM_034688, Description = Exocyst subunit exo70 family protein G1, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02732_153027-164011' '(at5g15810 : 879.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 624.0) no description available & (gnl|cdd|85826 : 349.0) no description available & (reliability: 1758.0) & (original description: Putative trmt1, Description = tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02744_32350-39869' '(at1g23280 : 292.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 288.0) no description available & (gnl|cdd|68448 : 278.0) no description available & (reliability: 584.0) & (original description: Putative Mak16, Description = Protein MAK16 homolog, PFAM = PF01778;PF04874)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02753_137061-142817' '(at3g09210 : 341.0) plastid transcriptionally active 13 (PTAC13); FUNCTIONS IN: transcription elongation regulator activity; INVOLVED IN: positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), Translation protein SH3-like, subgroup (InterPro:IPR014722), KOW (InterPro:IPR005824); Has 3797 Blast hits to 3795 proteins in 1334 species: Archae - 0; Bacteria - 2562; Metazoa - 0; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 1202 (source: NCBI BLink). & (gnl|cdd|48005 : 80.0) no description available & (reliability: 682.0) & (original description: Putative PTAC, Description = Plastid transcriptionally active, PFAM = PF02357)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02830_362872-366083' '(at5g07900 : 167.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36481 : 87.5) no description available & (gnl|cdd|66247 : 80.0) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400007323, Description = , PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02831_692982-697051' '(at1g55110 : 296.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02837_864459-868627' '(at1g53490 : 355.0) RING/U-box superfamily protein; Has 175 Blast hits to 173 proteins in 83 species: Archae - 2; Bacteria - 14; Metazoa - 69; Fungi - 24; Plants - 38; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative HEI10, Description = E3 ubiquitin-protein ligase CCNB1IP1 homolog, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02910_112145-118538' '(p93788|remo_soltu : 137.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 104.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03766;PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02996_245805-249559' '(at5g13150 : 535.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 342.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03018_748286-750759' '(at3g12630 : 145.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 128.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 126.0) no description available & (reliability: 290.0) & (original description: Putative SAP1, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 1, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03035_8262-12116' '(at2g33845 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative Os01g0754100, Description = DNA-binding protein-related-like, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03060_194190-197086' '(at1g09950 : 132.0) RESPONSE TO ABA AND SALT 1 (RAS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT1G58330.1); Has 520 Blast hits to 520 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400004967, Description = , PFAM = PF14144)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03104_445746-460069' '(at1g11650 : 422.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 92.4) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 844.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03128_174689-186800' '(at1g19860 : 213.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At1g19860, Description = Zinc finger CCCH domain-containing protein 6, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03156_55202-65540' '(at5g58470 : 155.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 88.8) no description available & (reliability: 310.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00641;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03171_331556-342435' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 99.3) no description available & (reliability: 292.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF03108;PF04434;PF10551;PF00564)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03184_88094-97793' '(at4g26000 : 414.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 162.0) no description available & (reliability: 828.0) & (original description: Putative PEP, Description = RNA-binding KH domain-containing protein PEPPER, PFAM = PF00013;PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03184_809628-812623' '(at2g23945 : 102.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G30030.1); Has 2014 Blast hits to 2006 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 70; Plants - 1675; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03224_587171-592797' '(at1g15910 : 537.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 163.0) no description available & (reliability: 1050.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03470;PF03469)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03240_188602-191948' '(at1g66180 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (reliability: 1052.0) & (original description: Putative BnaC04g55960D, Description = BnaC04g55960D protein, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03271_234680-239416' '(at5g55580 : 516.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 122.0) no description available & (gnl|cdd|66247 : 104.0) no description available & (reliability: 1032.0) & (original description: Putative MTERF9, Description = Transcription termination factor MTERF9, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03295_1085400-1087915' '(at1g51200 : 154.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 149.0) no description available & (q9llx1|isap1_orysa : 102.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03337_246359-249493' '(at3g60670 : 242.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 159.0) no description available & (reliability: 484.0) & (original description: Putative ZOSMA_74G00570, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03340_626282-629872' '(at2g44020 : 710.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 1566 Blast hits to 959 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|66247 : 311.0) no description available & (gnl|cdd|36481 : 157.0) no description available & (reliability: 1420.0) & (original description: Putative mTRF1, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03351_200012-205982' '(at5g13240 : 330.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 172.0) no description available & (gnl|cdd|38314 : 157.0) no description available & (reliability: 660.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03371_7528-13098' '(at3g26935 : 629.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 253.0) no description available & (gnl|cdd|34870 : 136.0) no description available & (reliability: 1258.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03374_210041-215859' '(at3g60670 : 177.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 138.0) no description available & (reliability: 354.0) & (original description: Putative PHYPADRAFT_228346, Description = Predicted protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03374_210073-214269' '(at3g60670 : 175.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 138.0) no description available & (reliability: 350.0) & (original description: Putative At2g01818, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03432_57016-88105' '(gnl|cdd|72855 : 208.0) no description available & (at5g11470 : 189.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative pco136762b, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03435_84915-91570' '(at1g60560 : 1112.0) SWIM zinc finger family protein; BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT4G13970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2224.0) & (original description: Putative BnaA01g22430D, Description = BnaA01g22430D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03436_387930-390619' '(at5g33340 : 130.0) Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation.; CONSTITUTIVE DISEASE RESISTANCE 1 (CDR1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G64830.1); Has 3792 Blast hits to 3768 proteins in 339 species: Archae - 0; Bacteria - 0; Metazoa - 807; Fungi - 843; Plants - 1930; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|36553 : 102.0) no description available & (reliability: 260.0) & (original description: Putative AP51, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03444_332935-338413' '(at5g40660 : 365.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 255.0) no description available & (gnl|cdd|70990 : 142.0) no description available & (reliability: 730.0) & (original description: Putative BnaA04g10520D, Description = BnaA04g10520D protein, PFAM = PF07542)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03444_333491-338362' '(at5g40660 : 134.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 121.0) no description available & (reliability: 268.0) & (original description: Putative At5g40660, Description = ATP synthase mitochondrial F1 complex assembly factor 2, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03461_7275-13765' '(at1g26660 : 154.0) Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053). & (gnl|cdd|38257 : 82.5) no description available & (reliability: 308.0) & (original description: Putative Sb02g038240, Description = Putative uncharacterized protein Sb02g038240, PFAM = PF02996)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03461_223050-230237' '(at1g69420 : 605.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36525 : 137.0) no description available & (gnl|cdd|65336 : 89.2) no description available & (reliability: 1210.0) & (original description: Putative PAT22, Description = Probable protein S-acyltransferase 22, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03463_202454-218296' '(at5g37055 : 203.0) Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.; SERRATED LEAVES AND EARLY FLOWERING (SEF); CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative SWC6, Description = SWR1 complex subunit 6, PFAM = PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03486_146599-153310' '(at3g60800 : 420.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186; Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|36529 : 276.0) no description available & (gnl|cdd|34870 : 119.0) no description available & (reliability: 840.0) & (original description: Putative PAT14, Description = Probable protein S-acyltransferase 14, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03532_139392-143535' '(gnl|cdd|37555 : 499.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (at3g55150 : 437.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03555_172486-176153' '(at3g59080 : 648.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 269.0) no description available & (gnl|cdd|84452 : 94.2) no description available & (q6yny7|asp1_orysa : 82.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative ACRE36, Description = Avr9/Cf-9 rapidly elicited protein 36, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03572_15117-20310' '(at3g21100 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03584_541556-549508' '(at5g45550 : 436.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 338.0) no description available & (gnl|cdd|86392 : 259.0) no description available & (reliability: 850.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03597_36166-45160' '(at3g20800 : 498.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 433.0) no description available & (gnl|cdd|38246 : 428.0) no description available & (reliability: 996.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03613_75571-84166' '(at4g22140 : 316.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 610.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03619_304140-307659' '(at1g64830 : 342.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 88.8) no description available & (q6yny7|asp1_orysa : 80.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 652.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03628_68236-83042' '(at3g58130 : 315.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 247.0) no description available & (gnl|cdd|66288 : 98.9) no description available & (reliability: 630.0) & (original description: Putative LOC100283695, Description = N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = PF02585)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03670_460471-463772' '(at1g09750 : 469.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (reliability: 938.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03705_356054-361400' '(at1g31040 : 246.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 176.0) no description available & (reliability: 492.0) & (original description: Putative Sb10g026620, Description = Putative uncharacterized protein Sb10g026620, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03723_250919-253832' '(at5g41060 : 106.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G26935.1); Has 5132 Blast hits to 5125 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 730; Plants - 844; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400028962, Description = S-acyltransferase, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03729_30209-46081' '(at1g32540 : 155.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative LOL2, Description = Protein LOL2, PFAM = PF06943;PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03731_235757-245187' '(at5g54310 : 395.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 186.0) no description available & (gnl|cdd|85433 : 157.0) no description available & (reliability: 790.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03770_214718-220230' '(at3g17611 : 352.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 170.0) no description available & (reliability: 704.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF01694;PF00641)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03786_291959-302005' '(gnl|cdd|38246 : 233.0) no description available & (gnl|cdd|80055 : 230.0) no description available & (at3g20800 : 223.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03793_256081-289952' '(at4g00850 : 108.0) Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA; GRF1-interacting factor 3 (GIF3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 2 (TAIR:AT1G01160.1); Has 414 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 2; Metazoa - 279; Fungi - 27; Plants - 81; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative GIF3, Description = GRF1-interacting factor 3, PFAM = PF05030)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03801_348069-357072' '(at2g39830 : 609.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 215.0) no description available & (reliability: 1218.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03805_72625-79461' '(at2g32080 : 412.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 213.0) no description available & (gnl|cdd|68420 : 104.0) no description available & (reliability: 824.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03863_48276-52202' '(at5g06810 : 429.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative BnaC09g32350D, Description = BnaC09g32350D protein, PFAM = PF02536;PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03886_312120-320173' '(at3g26935 : 575.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 246.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1150.0) & (original description: Putative PAT05, Description = Probable protein S-acyltransferase 5, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03930_573420-611374' '(at5g19420 : 828.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 134.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1656.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03949_613933-616913' '(at4g38160 : 418.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 119.0) no description available & (gnl|cdd|66247 : 117.0) no description available & (reliability: 836.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03981_54060-64359' '(at2g28450 : 748.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, RNA methyltransferase activity, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), (Uracil-5)-methyltransferase (InterPro:IPR010280); BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1). & (gnl|cdd|37398 : 292.0) no description available & (gnl|cdd|32446 : 149.0) no description available & (reliability: 1496.0) & (original description: Putative At2g28450, Description = Zinc finger CCCH domain-containing protein 24, PFAM = PF13847;PF05958;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04000_241133-247418' '(at2g47350 : 223.0) HIT zinc finger ;PAPA-1-like conserved region; CONTAINS InterPro DOMAIN/s: PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: PAPA-1-like family protein / zinc finger (HIT type) family protein (TAIR:AT3G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68370 : 110.0) no description available & (reliability: 446.0) & (original description: Putative At2g47350, Description = At2g47350, PFAM = PF04795;PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04015_267799-278456' '(at5g43100 : 659.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 247.0) no description available & (gnl|cdd|84452 : 133.0) no description available & (q6yny7|asp1_orysa : 98.6) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1318.0) & (original description: Putative ASP2, Description = Aspartic proteinase-like protein 2, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04019_505456-522609' '(at2g47850 : 457.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 336.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 122.0) no description available & (reliability: 914.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04078_142697-147617' '(at1g49920 : 135.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 86.5) no description available & (reliability: 254.0) & (original description: Putative At3g05850, Description = Putative ovule protein, PFAM = PF10551;PF03108;PF00564;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04122_304896-314679' '(at4g00990 : 424.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 247.0) no description available & (reliability: 796.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF02373;PF08879)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04122_309120-312489' '(at4g00990 : 125.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 104.0) no description available & (reliability: 232.0) & (original description: Putative glysoja_014359, Description = Transcription factor jumonji (JmjC) domain protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04206_214589-220986' '(at4g28820 : 95.9) HIT-type Zinc finger family protein; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38068 : 84.8) no description available & (reliability: 191.8) & (original description: Putative PHYPADRAFT_173627, Description = Predicted protein, PFAM = PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04220_520822-530151' '(at3g21810 : 130.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG401024331, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04223_189720-192728' '(p27484|grp2_nicsy : 98.6) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g17870 : 96.3) Encodes COLD SHOCK DOMAIN PROTEIN 3 (CSP3), involved in the acquisition of freezing tolerance.; cold shock domain protein 3 (CSP3); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: response to cold, DNA duplex unwinding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 72472 Blast hits to 41123 proteins in 2889 species: Archae - 51; Bacteria - 27281; Metazoa - 11105; Fungi - 2852; Plants - 6181; Viruses - 14957; Other Eukaryotes - 10045 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 192.6) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00313;PF00098;PF00098)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04254_162118-171506' '(at5g45550 : 321.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 263.0) no description available & (gnl|cdd|86392 : 211.0) no description available & (reliability: 612.0) & (original description: Putative mobC, Description = MOB kinase activator-like 1 homolog C, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04283_1027175-1032382' '(at3g63140 : 585.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 83.9) no description available & (reliability: 1170.0) & (original description: Putative CSP41A, Description = Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic, PFAM = PF01370)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04300_249151-280599' '(at3g04970 : 523.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36526 : 271.0) no description available & (gnl|cdd|34870 : 95.9) no description available & (reliability: 1046.0) & (original description: Putative PAT17, Description = Probable protein S-acyltransferase 17, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 163.2) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04347_258331-261853' '(at1g01300 : 549.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 263.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1018.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04361_17827-31020' '(at2g30580 : 398.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 128.0) no description available & (reliability: 750.0) & (original description: Putative DRIP1, Description = E3 ubiquitin protein ligase DRIP1, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04411_235207-245041' '(at3g57170 : 457.0) N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36397 : 311.0) no description available & (gnl|cdd|68593 : 172.0) no description available & (reliability: 914.0) & (original description: Putative BnaA09g36520D, Description = BnaA09g36520D protein, PFAM = PF05024)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_271508-274598' '(at3g18490 : 159.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 159.0) no description available & (reliability: 318.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_404977-408473' '(at3g18490 : 155.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 136.0) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_425293-428681' '(at3g18490 : 152.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 124.0) no description available & (reliability: 304.0) & (original description: Putative PGSC0003DMG400027447, Description = , PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_451359-454985' '(gnl|cdd|36553 : 103.0) no description available & (at2g03200 : 96.7) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_454919-457750' '(at3g18490 : 135.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 126.0) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04511_10064-12948' '(at2g34620 : 355.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G03050.1); Has 1033 Blast hits to 730 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|66247 : 155.0) no description available & (gnl|cdd|36481 : 89.8) no description available & (reliability: 710.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04554_774967-790116' '(at4g26000 : 352.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 154.0) no description available & (reliability: 704.0) & (original description: Putative PEP, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013;PF00013)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04582_96077-98683' '(at2g36320 : 128.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1); Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2; Bacteria - 0; Metazoa - 450; Fungi - 9; Plants - 480; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38383 : 113.0) no description available & (reliability: 256.0) & (original description: Putative BnaAnng21800D, Description = BnaAnng21800D protein, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04714_205464-262041' '(at3g60670 : 242.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 159.0) no description available & (reliability: 484.0) & (original description: Putative RCOM_1610740, Description = Zinc ion binding protein, putative, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04724_92741-97602' '(at1g64260 : 114.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.5) no description available & (reliability: 228.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF04434;PF10551)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04724_93462-96941' '(at1g64255 : 87.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, PMZ-type (InterPro:IPR006564), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72786 : 84.2) no description available & (reliability: 174.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF03108)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04804_119829-124382' '(p93788|remo_soltu : 144.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 113.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04819_454133-458607' '(at2g47350 : 190.0) HIT zinc finger ;PAPA-1-like conserved region; CONTAINS InterPro DOMAIN/s: PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: PAPA-1-like family protein / zinc finger (HIT type) family protein (TAIR:AT3G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68370 : 96.7) no description available & (reliability: 380.0) & (original description: Putative BnaA05g00590D, Description = BnaA05g00590D protein, PFAM = PF04438;PF04795)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04847_417949-440512' '(at1g55750 : 627.0) BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); CONTAINS InterPro DOMAIN/s: Kelch related (InterPro:IPR013089), BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (TAIR:AT3G61420.1); Has 363 Blast hits to 357 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 134; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37285 : 289.0) no description available & (reliability: 1254.0) & (original description: Putative BSD10, Description = Putative RNA polymerase II transcription factor B subunit 1-1, PFAM = PF08567;PF03909)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04893_247309-255233' '(at4g24630 : 483.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 227.0) no description available & (gnl|cdd|34870 : 122.0) no description available & (reliability: 966.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04899_194645-204642' '(at4g21610 : 110.0) Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.; lsd one like 2 (LOL2); CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 291 Blast hits to 191 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOL1, Description = AtLOL1, PFAM = PF06943;PF06943)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04953_522367-526807' '(at5g03150 : 293.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative JKD, Description = Zinc finger protein JACKDAW, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04992_193161-196539' '(at2g33845 : 168.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04995_709451-724967' '(at1g45207 : 339.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 96.2) no description available & (reliability: 678.0) & (original description: Putative At1g45207, Description = Remorin-like protein, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05004_504552-508573' '(at4g31540 : 951.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86233 : 432.0) no description available & (gnl|cdd|37555 : 395.0) no description available & (reliability: 1902.0) & (original description: Putative BnaA01g34780D, Description = BnaA01g34780D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05060_326492-328773' '(at3g28917 : 89.7) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 85.0) no description available & (reliability: 179.4) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05100_189922-198973' '(p82277|rrp2_spiol : 264.0) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (at3g52150 : 258.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 33 (TAIR:AT3G52380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35346 : 89.8) no description available & (reliability: 516.0) & (original description: Putative BnaA04g05670D, Description = BnaA04g05670D protein, PFAM = PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05118_443029-451331' '(at2g45820 : 93.6) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 91.7) Remorin (pp34) - Solanum tuberosum (Potato) & (gnl|cdd|67381 : 83.5) no description available & (reliability: 180.2) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05175_167470-172155' '(at3g25700 : 494.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 661 Blast hits to 418 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 4; Plants - 631; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36553 : 211.0) no description available & (reliability: 988.0) & (original description: Putative At3g25700, Description = Aspartyl protease family protein, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05206_104552-107742' '(at1g55460 : 497.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (gnl|cdd|38048 : 313.0) no description available & (reliability: 994.0) & (original description: Putative KIN, Description = DNA/RNA-binding protein KIN17, PFAM = PF10357)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05245_5548-9308' '(at4g19650 : 519.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: mitochondrial transcription termination factor-related / mTERF-related (TAIR:AT5G45113.1); Has 236 Blast hits to 231 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 229; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative BnaC01g11990D, Description = BnaC01g11990D protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05283_161210-189040' '(gnl|cdd|72855 : 170.0) no description available & (at5g11470 : 161.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaA03g03350D, Description = Putative ovule protein, PFAM = PF01426;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05323_189915-205245' '(at2g33835 : 97.1) Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.; FRIGIDA-ESSENTIAL 1 (FES1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of vernalization response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, vascular tissue, root tip; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 279 Blast hits to 165 proteins in 46 species: Archae - 0; Bacteria - 31; Metazoa - 18; Fungi - 38; Plants - 89; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative POPTR_0004s04680g, Description = Zinc finger family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05346_371217-374903' '(at1g67340 : 459.0) HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1); Has 623 Blast hits to 604 proteins in 167 species: Archae - 0; Bacteria - 161; Metazoa - 77; Fungi - 145; Plants - 151; Viruses - 2; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative At1g67340, Description = F-box protein At1g67340, PFAM = PF01753)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05348_432167-434685' '(gnl|cdd|38383 : 144.0) no description available & (at1g12440 : 123.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G12040.2); Has 1075 Blast hits to 1057 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 9; Plants - 482; Viruses - 6; Other Eukaryotes - 126 (source: NCBI BLink). & (q9llx1|isap1_orysa : 85.9) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 246.0) & (original description: Putative SAP7, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 7, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05494_53205-57869' '(at3g44150 : 288.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative BnaA06g38910D, Description = BnaA06g38910D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05574_407617-415216' '(at2g39830 : 662.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 223.0) no description available & (reliability: 1324.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05583_122931-129392' '(at3g48440 : 319.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 234.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 638.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05596_142081-145397' '(at1g64830 : 390.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 214.0) no description available & (reliability: 758.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05621_842054-845542' '(at1g67340 : 459.0) HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1); Has 623 Blast hits to 604 proteins in 167 species: Archae - 0; Bacteria - 161; Metazoa - 77; Fungi - 145; Plants - 151; Viruses - 2; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative At1g67340, Description = F-box protein At1g67340, PFAM = PF01753)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05813_151962-156493' '(at1g45207 : 172.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05821_168762-175835' '(at3g26935 : 537.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 248.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1074.0) & (original description: Putative PAT04, Description = Palmitoyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05822_511146-519977' '(at5g58760 : 707.0) Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.; damaged DNA binding 2 (DDB2); FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Zinc finger, CCHC-type (InterPro:IPR001878), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DROUGHT SENSITIVE 1 (TAIR:AT1G80710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39529 : 357.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 1414.0) & (original description: Putative DDB2, Description = Protein DAMAGED DNA-BINDING 2, PFAM = PF00400)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05827_297656-303429' '(at3g18580 : 258.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: mitochondrially targeted single-stranded DNA binding protein (TAIR:AT4G11060.1); Has 3646 Blast hits to 3646 proteins in 1001 species: Archae - 0; Bacteria - 2307; Metazoa - 115; Fungi - 0; Plants - 68; Viruses - 24; Other Eukaryotes - 1132 (source: NCBI BLink). & (gnl|cdd|36866 : 135.0) no description available & (reliability: 516.0) & (original description: Putative At3g18580, Description = Single-strand DNA-binding protein, PFAM = PF00436)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05948_249368-256300' '(at1g29800 : 655.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37054 : 415.0) no description available & (gnl|cdd|32754 : 148.0) no description available & (reliability: 1310.0) & (original description: Putative At1g29800, Description = Putative uncharacterized protein At1g29800, PFAM = PF04366;PF01363)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06016_34840-43360' '(at1g05055 : 601.0) Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.; general transcription factor II H2 (GTF2H2); CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), TFIIH basal transcription factor complex, subunit SSL1 (InterPro:IPR012170), Zinc finger, RING-type (InterPro:IPR001841), TFIIH C1-like, C-terminal (InterPro:IPR004595), von Willebrand factor, type A (InterPro:IPR002035); Has 470 Blast hits to 463 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 160; Plants - 39; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38018 : 492.0) no description available & (gnl|cdd|67664 : 348.0) no description available & (reliability: 1202.0) & (original description: Putative GTF2H2, Description = General transcription factor IIH subunit 2, PFAM = PF07975;PF04056)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06084_29752-36492' '(at1g11650 : 418.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 143.0) no description available & (gnl|cdd|31068 : 97.0) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 836.0) & (original description: Putative RBP45B, Description = Polyadenylate-binding protein RBP45B, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06144_15582-19480' '(gnl|cdd|86233 : 478.0) no description available & (gnl|cdd|37555 : 476.0) no description available & (at2g39380 : 435.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06200_291598-295943' '(at4g28440 : 177.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G33845.1); Has 214 Blast hits to 214 proteins in 47 species: Archae - 22; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06267_36902-45628' '(at1g19860 : 126.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400003556, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06275_327112-330503' '(gnl|cdd|36553 : 156.0) no description available & (at3g18490 : 154.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06311_182158-187880' '(at5g58470 : 150.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 86.5) no description available & (reliability: 300.0) & (original description: Putative BnaCnng31980D, Description = BnaCnng31980D protein, PFAM = PF00076;PF00641)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06394_470212-473469' '(at1g66810 : 201.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G68200.1); Has 998 Blast hits to 914 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 425; Fungi - 99; Plants - 223; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative At1g66810, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06408_372999-376127' '(at1g58330 : 125.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative PGSC0003DMG400011102, Description = DOG1 domain-containing protein, PFAM = PF14144)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06436_108459-114474' '(at2g45640 : 182.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 169.0) no description available & (gnl|cdd|38601 : 146.0) no description available & (reliability: 364.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06512_334-3510' '(at4g17900 : 273.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 189.0) no description available & (reliability: 546.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06517_71391-77292' '(at1g09920 : 233.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06518_28079-35983' '(at1g45207 : 207.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 83.1) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06525_123685-127067' '(at1g74120 : 372.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 15 (TAIR:AT5G54180.1); Has 926 Blast hits to 761 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative MTERF15, Description = Transcription termination factor MTERF15, mitochondrial, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06590_702369-706319' '(gnl|cdd|86233 : 476.0) no description available & (gnl|cdd|37555 : 470.0) no description available & (at3g09520 : 434.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative BnaA06g04270D, Description = BnaA06g04270D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06625_255312-273317' '(at5g53540 : 570.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35956 : 434.0) no description available & (gnl|cdd|30812 : 204.0) no description available & (p54774|cdc48_soybn : 170.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1138.0) & (original description: Putative atad1b, Description = ATPase family AAA domain-containing protein 1-B, PFAM = PF00004)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06626_95464-100570' '(at2g05160 : 458.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF12872;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06726_12805-15238' '(at3g18870 : 272.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 839 Blast hits to 671 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66247 : 107.0) no description available & (reliability: 544.0) & (original description: Putative At3g18870, Description = At3g18870, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06778_407970-414627' '(at2g24830 : 379.0) zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), D111/G-patch (InterPro:IPR000467); Has 706 Blast hits to 687 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 400; Fungi - 113; Plants - 123; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37396 : 310.0) no description available & (reliability: 758.0) & (original description: Putative Os02g0793000, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF01585)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06933_211153-220677' '(at1g75340 : 164.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 328.0) & (original description: Putative CG1, Description = Zinc finger CCCH domain-containing protein 16, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07024_230744-235105' '(at1g53490 : 405.0) RING/U-box superfamily protein; Has 175 Blast hits to 173 proteins in 83 species: Archae - 2; Bacteria - 14; Metazoa - 69; Fungi - 24; Plants - 38; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative HEI10, Description = E3 ubiquitin-protein ligase CCNB1IP1 homolog, PFAM = PF14634)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07030_391701-399259' '(at1g32130 : 370.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (gnl|cdd|69433 : 266.0) no description available & (gnl|cdd|37004 : 252.0) no description available & (reliability: 740.0) & (original description: Putative IWS2, Description = INTERACTS WITH SPT6-like protein IWS2, PFAM = PF08711)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07051_39066-43993' '(at3g60400 : 530.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G06810.1); Has 395 Blast hits to 388 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative MTERF18, Description = Transcription termination factor MTEF18, mitochondrial, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07054_91667-114221' '(at1g64830 : 349.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 216.0) no description available & (gnl|cdd|84452 : 95.7) no description available & (reliability: 680.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07054_137716-141062' '(at1g64830 : 325.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 215.0) no description available & (gnl|cdd|84452 : 100.0) no description available & (reliability: 610.0) & (original description: Putative At2g28010, Description = Aspartyl protease-like protein, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07058_550514-568868' '(at5g19420 : 902.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 143.0) no description available & (gnl|cdd|36640 : 109.0) no description available & (reliability: 1804.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF01363;PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07255_146789-151638' '(at2g21710 : 726.0) embryo defective 2219 (EMB2219); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 149.0) no description available & (gnl|cdd|36481 : 125.0) no description available & (reliability: 1452.0) & (original description: Putative MTERF2, Description = Transcription termination factor MTERF2, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07365_81816-99477' '(at2g14255 : 694.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35729 : 338.0) no description available & (gnl|cdd|34870 : 118.0) no description available & (reliability: 1388.0) & (original description: Putative PAT23, Description = Probable protein S-acyltransferase 23, PFAM = PF12796;PF12796;PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07457_202485-208443' '(at1g23750 : 136.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative POPTR_0010s05070g, Description = DNA-binding family protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07466_505223-517513' '(at3g12680 : 508.0) Member of the floral homeotic AGAMOUS pathway.; ENHANCER OF AG-4 1 (HUA1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G47850.3); Has 2136 Blast hits to 795 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 89; Plants - 1572; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (q9swf9|zfnl_pea : 185.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (gnl|cdd|36890 : 93.5) no description available & (reliability: 1016.0) & (original description: Putative HUA1, Description = Zinc finger CCCH domain-containing protein 37, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07474_36027-56329' '(at1g43850 : 489.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07590_280106-309123' '(at5g43100 : 737.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 241.0) no description available & (gnl|cdd|84452 : 126.0) no description available & (q6yny7|asp1_orysa : 109.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1474.0) & (original description: Putative ASP2, Description = Aspartic proteinase-like protein 2, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07743_121833-127487' '(at1g45207 : 177.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07788_260915-264021' '(at1g79220 : 344.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 156.0) no description available & (gnl|cdd|36481 : 102.0) no description available & (reliability: 688.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07790_337509-345441' '(gnl|cdd|69947 : 442.0) no description available & (at4g21790 : 387.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07850_243783-250169' '(at2g36080 : 185.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 364.0) & (original description: Putative ARF32, Description = B3 domain-containing protein At3g11580, PFAM = PF02362)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07882_201109-203624' '(gnl|cdd|38383 : 154.0) no description available & (at1g51200 : 148.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 97.1) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative SAP2, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 2, PFAM = PF01754;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07899_23189-29886' '(at1g56460 : 150.0) HIT zinc finger ;PAPA-1-like conserved region; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1). & (gnl|cdd|68370 : 106.0) no description available & (reliability: 300.0) & (original description: Putative PAPA1, Description = PAPA-1-like family protein, PFAM = PF04795;PF04438)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07944_542126-558243' '(q8s4p6|ez1_maize : 811.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (at2g23380 : 810.0) Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.; CURLY LEAF (CLF); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT4G02020.1); Has 5951 Blast hits to 5285 proteins in 534 species: Archae - 0; Bacteria - 530; Metazoa - 2584; Fungi - 730; Plants - 989; Viruses - 16; Other Eukaryotes - 1102 (source: NCBI BLink). & (gnl|cdd|36295 : 409.0) no description available & (gnl|cdd|47645 : 111.0) no description available & (reliability: 1620.0) & (original description: Putative CLF, Description = Histone-lysine N-methyltransferase CLF, PFAM = PF00856)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07981_150993-154846' '(at1g21000 : 196.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86704 : 166.0) no description available & (reliability: 392.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08018_38853-41401' '(at3g48550 : 100.0) BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400018091, Description = OSJNBa0044M19.6 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08206_212655-217791' '(at1g01160 : 87.8) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative AN3, Description = GRF1-interacting factor 2, PFAM = PF05030)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08390_631617-640948' '(at2g01650 : 431.0) encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.; plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|37910 : 184.0) no description available & (reliability: 862.0) & (original description: Putative PUX2, Description = Plant UBX domain-containing protein 2, PFAM = PF00789;PF09409)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08504_329348-334410' '(at3g51950 : 276.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08519_312668-318547' '(at2g02160 : 266.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 173.0) no description available & (reliability: 532.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08566_323382-339018' '(gnl|cdd|69947 : 370.0) no description available & (at4g21790 : 333.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08581_179949-182581' '(at4g30410 : 98.2) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative MTR_4g129560, Description = Sequence-specific DNA-binding transcription factors protein, putative, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08587_4230-9621' '(at2g45820 : 101.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 101.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 200.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08617_142951-148869' '(at5g10770 : 443.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 219.0) no description available & (gnl|cdd|84452 : 93.8) no description available & (q6yny7|asp1_orysa : 80.1) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 886.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-2, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08651_458768-465483' '(at1g23280 : 290.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 286.0) no description available & (gnl|cdd|68448 : 281.0) no description available & (reliability: 580.0) & (original description: Putative MAK16, Description = Protein MAK16 homolog, PFAM = PF01778;PF04874)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08702_70573-77320' '(at5g04270 : 285.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G09320.1); Has 5087 Blast hits to 5085 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2174; Fungi - 756; Plants - 837; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36529 : 204.0) no description available & (gnl|cdd|34870 : 114.0) no description available & (reliability: 570.0) & (original description: Putative PAT15, Description = Probable protein S-acyltransferase 15, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08709_175503-178804' '(at2g39710 : 545.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 188.0) no description available & (gnl|cdd|84452 : 83.8) no description available & (reliability: 992.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08855_147258-152047' '(at2g01818 : 170.0) PLATZ transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 397 Blast hits to 397 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 109.0) no description available & (reliability: 340.0) & (original description: Putative BnaA06g34640D, Description = BnaA06g34640D protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08859_32596-39197' '(at5g19350 : 442.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29846 Blast hits to 17541 proteins in 840 species: Archae - 12; Bacteria - 2412; Metazoa - 15092; Fungi - 3490; Plants - 6065; Viruses - 0; Other Eukaryotes - 2775 (source: NCBI BLink). & (gnl|cdd|35370 : 146.0) no description available & (gnl|cdd|31068 : 96.7) no description available & (q08937|roc2_nicsy : 89.4) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (reliability: 884.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08872_19090-24515' '(at5g61190 : 266.0) putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 3024 Blast hits to 2428 proteins in 238 species: Archae - 10; Bacteria - 118; Metazoa - 1187; Fungi - 140; Plants - 554; Viruses - 10; Other Eukaryotes - 1005 (source: NCBI BLink). & (gnl|cdd|86646 : 203.0) no description available & (reliability: 532.0) & (original description: Putative BnaA09g39750D, Description = BnaA09g39750D protein, PFAM = PF14418;PF01936)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08890_19911-26129' '(at1g31040 : 100.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 88.0) no description available & (reliability: 200.0) & (original description: Putative PGSC0003DMG400038899, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08892_1821-23178' '(at1g70810 : 213.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|84577 : 80.4) no description available & (reliability: 426.0) & (original description: Putative CAR10, Description = Protein C2-DOMAIN ABA-RELATED 10, PFAM = PF00168)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08894_32933-44293' '(at1g07705 : 650.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 97.8) no description available & (reliability: 1234.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08984_147852-163794' '(at3g18620 : 336.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 4961 Blast hits to 4959 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2163; Fungi - 692; Plants - 838; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|36527 : 187.0) no description available & (gnl|cdd|34870 : 86.2) no description available & (reliability: 672.0) & (original description: Putative PAT11, Description = Protein S-acyltransferase 11, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09063_29224-37201' '(at1g43850 : 282.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09087_120869-124020' '(at1g21150 : 147.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 92.5) no description available & (gnl|cdd|66247 : 87.3) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400027560, Description = Putative ovule protein, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09130_153779-161213' '(at5g45550 : 423.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 337.0) no description available & (gnl|cdd|86392 : 258.0) no description available & (reliability: 824.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09189_11426-13923' '(at1g12440 : 141.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G12040.2); Has 1075 Blast hits to 1057 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 9; Plants - 482; Viruses - 6; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38383 : 140.0) no description available & (q9llx1|isap1_orysa : 94.4) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative SAP7, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 7, PFAM = PF01754;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09401_25757-39210' '(at3g56330 : 468.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT5G15810.1); Has 951 Blast hits to 937 proteins in 347 species: Archae - 257; Bacteria - 66; Metazoa - 191; Fungi - 140; Plants - 103; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|36467 : 262.0) no description available & (gnl|cdd|32052 : 225.0) no description available & (reliability: 936.0) & (original description: Putative trm1, Description = tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase Trm1, PFAM = PF02005)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09452_121601-141551' '(at5g43100 : 725.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 258.0) no description available & (gnl|cdd|84452 : 133.0) no description available & (q6yny7|asp1_orysa : 111.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative At3g50050, Description = Putative uncharacterized protein At3g50050, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09489_47337-54398' '(at4g06634 : 379.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1). & (reliability: 758.0) & (original description: Putative pho, Description = Transcriptional repressor protein YY1, PFAM = PF00096;PF00096;PF00096)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09489_68276-72658' '(gnl|cdd|38514 : 143.0) no description available & (at1g16430 : 139.0) Surfeit locus protein 5 subunit 22 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med22 (InterPro:IPR009332); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 5 subunit 22 of Mediator complex (TAIR:AT1G07950.1); Has 238 Blast hits to 238 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 12; Plants - 53; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|69686 : 135.0) no description available & (reliability: 278.0) & (original description: Putative MED22B, Description = Mediator of RNA polymerase II transcription subunit 22b, PFAM = PF06179)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09534_50880-67114' '(at3g60800 : 440.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186; Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|36529 : 280.0) no description available & (gnl|cdd|34870 : 121.0) no description available & (reliability: 880.0) & (original description: Putative PAT14, Description = Probable protein S-acyltransferase 14, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09628_63936-71196' '(at1g32130 : 373.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (gnl|cdd|69433 : 265.0) no description available & (gnl|cdd|37004 : 251.0) no description available & (reliability: 746.0) & (original description: Putative IWS1, Description = Transcription elongation factor (TFIIS) family protein, PFAM = PF08711)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09698_59031-64840' '(at2g41835 : 307.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 171.0) no description available & (reliability: 614.0) & (original description: Putative SAP16, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16, PFAM = PF01428;PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09767_108148-112506' '(at1g49920 : 88.2) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF03108;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09812_49576-61540' '(at1g20110 : 472.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|85407 : 93.5) no description available & (reliability: 944.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363;PF08416)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09869_135644-144518' '(at3g56930 : 496.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G05070.1). & (gnl|cdd|36525 : 237.0) no description available & (gnl|cdd|34870 : 119.0) no description available & (reliability: 992.0) & (original description: Putative PGSC0003DMG400007187, Description = S-acyltransferase, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10015_974619-978556' '(at3g55150 : 583.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|86233 : 512.0) no description available & (gnl|cdd|37555 : 507.0) no description available & (reliability: 1166.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10048_337343-342308' '(at2g05160 : 469.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10056_90722-103359' '(at4g38170 : 598.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF10551;PF04434)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10067_96-3283' '(at5g64950 : 261.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 112.0) no description available & (gnl|cdd|66247 : 107.0) no description available & (reliability: 522.0) & (original description: Putative At5g64950, Description = Emb}, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10203_2180-7355' '(at1g65260 : 204.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q8s0j7|im30_orysa : 198.0) Probable membrane-associated 30 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (reliability: 408.0) & (original description: Putative pspA, Description = Phage shock protein A, PspA, PFAM = PF04012)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10305_89330-94448' '(at5g05070 : 456.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G40990.1); Has 5095 Blast hits to 5086 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 760; Plants - 842; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|36525 : 226.0) no description available & (gnl|cdd|34870 : 113.0) no description available & (reliability: 912.0) & (original description: Putative PAT03, Description = Probable protein S-acyltransferase 3, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10305_137887-145505' '(at3g56930 : 499.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G05070.1). & (gnl|cdd|36525 : 238.0) no description available & (gnl|cdd|34870 : 117.0) no description available & (reliability: 998.0) & (original description: Putative PAT03, Description = Probable protein S-acyltransferase 3, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10579_204759-213445' '(at3g48050 : 1064.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 249.0) no description available & (gnl|cdd|72853 : 189.0) no description available & (reliability: 2128.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10630_296263-301325' '(at3g43230 : 665.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G29800.1); Has 4080 Blast hits to 3974 proteins in 331 species: Archae - 0; Bacteria - 230; Metazoa - 2175; Fungi - 711; Plants - 392; Viruses - 3; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|37054 : 397.0) no description available & (gnl|cdd|67959 : 162.0) no description available & (reliability: 1330.0) & (original description: Putative Sb02g039290, Description = Putative uncharacterized protein Sb02g039290, PFAM = PF01363;PF04366)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10877_64717-77396' '(at5g56900 : 770.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37687 : 506.0) no description available & (gnl|cdd|86708 : 131.0) no description available & (reliability: 1540.0) & (original description: Putative At5g56900, Description = Zinc finger CCCH domain-containing protein 64, PFAM = PF04676;PF04677)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10968_402271-404723' '(at3g12630 : 113.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 92.4) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 91.3) no description available & (reliability: 226.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11019_109177-117133' '(at5g59730 : 128.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H7 (EXO70H7); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H6 (TAIR:AT1G07725.1); Has 772 Blast hits to 760 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 5; Plants - 633; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37555 : 122.0) no description available & (gnl|cdd|86233 : 113.0) no description available & (reliability: 256.0) & (original description: Putative EXO70H1, Description = Exocyst subunit exo70 family protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11061_1626-26002' '(gnl|cdd|69947 : 367.0) no description available & (at4g21790 : 335.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11103_230140-237903' '(at2g32080 : 417.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 214.0) no description available & (gnl|cdd|68420 : 105.0) no description available & (reliability: 834.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11153_105493-119417' '(at1g78930 : 511.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|66247 : 193.0) no description available & (gnl|cdd|36481 : 102.0) no description available & (reliability: 1022.0) & (original description: Putative mterf3, Description = mTERF domain-containing protein, mitochondrial, PFAM = PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11168_19908-24384' '(at2g36930 : 160.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); Has 726 Blast hits to 418 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 301; Fungi - 225; Plants - 112; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38618 : 93.2) no description available & (reliability: 320.0) & (original description: Putative Os08g0564500, Description = Os08g0564500 protein, PFAM = PF12171)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11361_230047-234604' '(at4g02220 : 453.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 268.0) no description available & (gnl|cdd|67794 : 97.2) no description available & (reliability: 906.0) & (original description: Putative At4g02220, Description = MYND type zinc finger and programmed cell death 2 C-terminal domain-containing protein, PFAM = PF04194;PF01753)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11702_32077-36405' '(at5g26600 : 565.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36762 : 304.0) no description available & (gnl|cdd|30866 : 138.0) no description available & (reliability: 1056.0) & (original description: Putative cef1, Description = Isopenicillin N epimerase, PFAM = PF00266)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11996_44139-49322' '(at1g04500 : 181.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 81.0) no description available & (reliability: 362.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12127_50168-52746' '(at3g12630 : 102.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|38383 : 97.0) no description available & (q9llx1|isap1_orysa : 84.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: Putative AN1, Description = Zinc finger protein, PFAM = PF01428)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12159_993692-1014538' '(at2g30580 : 423.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 137.0) no description available & (reliability: 804.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12320_179396-193385' '(at5g19420 : 1556.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 128.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 3112.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF13713;PF16457;PF01363;PF16627)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12415_22929-26698' '(at1g70810 : 198.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 181.0) no description available & (reliability: 396.0) & (original description: Putative C2, Description = GTPase activating protein 1, PFAM = PF00168)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12582_5069-7524' '(at2g36320 : 149.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1); Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2; Bacteria - 0; Metazoa - 450; Fungi - 9; Plants - 480; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38383 : 147.0) no description available & (q9llx1|isap1_orysa : 97.8) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative SAP4, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 4, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12639_5028-13231' '(at5g18550 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 341.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 694.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12715_118958-129512' '(at5g56930 : 147.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12825_14272-16775' '(at1g51200 : 151.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 146.0) no description available & (q9llx1|isap1_orysa : 107.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 302.0) & (original description: Putative SAP9, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 9, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12835_34771-49872' '(at4g23540 : 772.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G34357.1); Has 378 Blast hits to 366 proteins in 171 species: Archae - 0; Bacteria - 6; Metazoa - 125; Fungi - 137; Plants - 63; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|36462 : 298.0) no description available & (gnl|cdd|87454 : 110.0) no description available & (reliability: 1544.0) & (original description: Putative , Description = , PFAM = PF08161)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12994_69504-72919' '(at1g25510 : 414.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 235.0) no description available & (reliability: 824.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13268_64622-68529' '(at3g09520 : 587.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37555 : 526.0) no description available & (gnl|cdd|86233 : 522.0) no description available & (reliability: 1068.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13762_169389-175939' '(at4g27000 : 390.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 92.0) no description available & (p19683|roc4_nicsy : 82.8) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 780.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13950_169630-175663' '(at1g21150 : 139.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 96.6) no description available & (gnl|cdd|36481 : 92.1) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf14042_63259-66578' '(at2g39710 : 540.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 192.0) no description available & (gnl|cdd|84452 : 93.8) no description available & (reliability: 1062.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15360_45141-54318' '(at4g32720 : 367.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47984 : 89.5) no description available & (gnl|cdd|37066 : 84.4) no description available & (reliability: 734.0) & (original description: Putative LA1, Description = La protein 1, PFAM = PF08777;PF00076;PF05383)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15538_30780-34760' '(at4g17600 : 249.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative Lil3:1, Description = AT4g17600/dl4835w, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15568_121138-126652' '(at3g48940 : 105.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 210.0) & (original description: Putative REM1, Description = Remorin 1, PFAM = PF03766;PF03763)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15653_81353-93154' '(at3g58130 : 312.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 248.0) no description available & (gnl|cdd|66288 : 98.5) no description available & (reliability: 624.0) & (original description: Putative LOC100283695, Description = N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = PF02585)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15694_81217-85938' '(at3g53680 : 245.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative TCM_040248, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain, putative, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15972_353089-356478' '(at5g61010 : 272.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 197.0) no description available & (gnl|cdd|86233 : 135.0) no description available & (reliability: 544.0) & (original description: Putative BnaC02g37970D, Description = Exocyst complex component 7, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16022_233313-240704' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 136.0) no description available & (reliability: 1286.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16127_8294-16196' '(at2g47850 : 331.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 300.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 101.0) no description available & (reliability: 662.0) & (original description: Putative Os01g0257400, Description = Zinc finger CCCH domain-containing protein 5, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16197_336556-340199' '(at3g59080 : 632.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 265.0) no description available & (gnl|cdd|84452 : 90.7) no description available & (reliability: 1264.0) & (original description: Putative ACRE36, Description = Avr9/Cf-9 rapidly elicited protein 36, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16530_66149-77564' '(at4g17600 : 218.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf17127_31534-46685' '(p93788|remo_soltu : 109.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 89.7) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf17473_35109-46600' '(at5g58470 : 177.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 83.0) no description available & (reliability: 354.0) & (original description: Putative TAF15B, Description = Transcription initiation factor TFIID subunit 15b, PFAM = PF00641;PF00076)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18157_2764-6719' '(at1g68200 : 187.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18268_7170-25797' '(at5g15810 : 852.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 613.0) no description available & (gnl|cdd|85826 : 338.0) no description available & (reliability: 1704.0) & (original description: Putative trmt1, Description = tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18401_51459-55139' '(at1g09750 : 457.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 186.0) no description available & (reliability: 914.0) & (original description: Putative cpa63, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18513_1-4727' '(at3g17611 : 355.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 170.0) no description available & (reliability: 710.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF01694;PF00641)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20097_66767-72155' '(at1g64260 : 151.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 117.0) no description available & (reliability: 302.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434;PF03108)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20787_13751-19564' '(at5g45550 : 393.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 322.0) no description available & (gnl|cdd|86392 : 247.0) no description available & (reliability: 774.0) & (original description: Putative mats, Description = MOB kinase activator 1B, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20828_20665-27363' '(at3g26935 : 536.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 246.0) no description available & (gnl|cdd|34870 : 130.0) no description available & (reliability: 1072.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf21890_78185-85432' '(at2g30580 : 166.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf23254_32912-38675' '(at4g24630 : 475.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 226.0) no description available & (gnl|cdd|34870 : 130.0) no description available & (reliability: 950.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf23876_74425-77941' '(at1g64830 : 344.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 206.0) no description available & (gnl|cdd|84452 : 87.6) no description available & (reliability: 654.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf27226_51215-55194' '(at4g31540 : 553.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37555 : 304.0) no description available & (gnl|cdd|86233 : 301.0) no description available & (reliability: 1106.0) & (original description: Putative BnaA01g34780D, Description = BnaA01g34780D protein, PFAM = PF03081)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf27305_77328-93859' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 488.0) no description available & (gnl|cdd|47550 : 250.0) no description available & (p29619|cdc22_orysa : 226.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf29588_70608-77655' '(at5g45550 : 386.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 315.0) no description available & (gnl|cdd|86392 : 243.0) no description available & (reliability: 754.0) & (original description: Putative MOB1B, Description = MOB kinase activator 1B, PFAM = PF03637)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf30681_8711-10897' '(at2g03050 : 270.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 93 (EMB93); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to singlet oxygen, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66247 : 127.0) no description available & (gnl|cdd|36481 : 85.9) no description available & (reliability: 540.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf31903_1-3859' '(at4g24015 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative RHA4A, Description = Probable E3 ubiquitin-protein ligase RHA4A, PFAM = PF13639)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf32603_23042-25494' '(at1g51200 : 150.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 145.0) no description available & (q9llx1|isap1_orysa : 104.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 300.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428;PF01754)' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf33312_14771-27903' '(at5g16680 : 327.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T
'27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf38001_2407-5249' '(at1g11650 : 219.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative dbdA, Description = Nuclear acid binding protein, putative, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold209_141287-149419' '(at5g19960 : 153.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.5) no description available & (reliability: 306.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold477_8649-12471' '(gnl|cdd|35753 : 104.0) no description available & (at5g59950 : 94.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (reliability: 189.4) & (original description: Putative aly, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold843_92001-96927' '(gnl|cdd|39859 : 350.0) no description available & (q27k34|pla2_orysa : 267.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 248.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 496.0) & (original description: Putative TEL2, Description = Terminal ear1-like 2 protein, PFAM = PF04059;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold955_12727-16731' '(at5g66010 : 162.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|39412 : 108.0) no description available & (reliability: 324.0) & (original description: Putative At5g66010, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold1613_81586-91207' '(at3g25470 : 380.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 265.0) no description available & (reliability: 760.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01479;PF01728)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold1756_76984-80927' '(at1g13190 : 195.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55670.1); Has 32447 Blast hits to 17825 proteins in 1064 species: Archae - 7; Bacteria - 12227; Metazoa - 10368; Fungi - 2543; Plants - 3608; Viruses - 174; Other Eukaryotes - 3520 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative F3F19.21, Description = F3F19.21 protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold1963_1118-16296' '(at5g15270 : 235.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 206.0) no description available & (reliability: 470.0) & (original description: Putative BnaC09g54720D, Description = BnaC09g54720D protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold2785_73314-78509' '(at3g15010 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 106.0) no description available & (p82277|rrp2_spiol : 88.2) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 314.0) & (original description: Putative Os01g0614500, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold3476_58763-63989' '(at3g19090 : 204.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 190.0) no description available & (gnl|cdd|47984 : 86.8) no description available & (reliability: 408.0) & (original description: Putative FIP1, Description = La-related protein 7, PFAM = PF05383;PF07145)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold6759_38510-45402' '(at2g44710 : 486.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 165.0) no description available & (reliability: 972.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold7128_5267-23321' '(at1g09700 : 87.8) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative Sb07g019380, Description = Putative uncharacterized protein Sb07g019380, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold9236_19751-24275' '(at4g28990 : 98.2) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative BnaA01g07930D, Description = BnaA01g07930D protein, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold9467_16468-21341' '(p19682|roc3_nicsy : 461.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 277.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 107.0) no description available & (gnl|cdd|47687 : 84.5) no description available & (reliability: 554.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold10143_28025-31678' '(at3g56860 : 284.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|39406 : 99.0) no description available & (reliability: 568.0) & (original description: Putative UBA2B, Description = UBP1-associated protein 2B, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold12342_31817-41991' '(at3g20890 : 238.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G66010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36579 : 216.0) no description available & (reliability: 476.0) & (original description: Putative HNRH1, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold14818_1743-10312' '(at1g32790 : 301.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold14993_1587-6588' '(at1g14340 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative Zm.3709, Description = Putative RNA recognition motif containing family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold15109_50324-56975' '(at5g46840 : 305.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative At5g46840, Description = At5g46840, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold18559_8396-12106' '(at1g58470 : 204.0) encodes an RNA-binding protein; RNA-binding protein 1 (RBP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55550.4); Has 25375 Blast hits to 16260 proteins in 820 species: Archae - 0; Bacteria - 1958; Metazoa - 13222; Fungi - 2417; Plants - 5451; Viruses - 0; Other Eukaryotes - 2327 (source: NCBI BLink). & (gnl|cdd|39406 : 177.0) no description available & (reliability: 408.0) & (original description: Putative RBP1, Description = RNA-binding protein 1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold20378_1-9903' '(at2g43410 : 519.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35367 : 82.8) no description available & (reliability: 1038.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF07744;PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold20951_8630-17389' '(at4g03110 : 490.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 395.0) no description available & (reliability: 980.0) & (original description: Putative BRN2, Description = RNA-binding protein BRN2, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold23420_20731-23700' '(at5g09880 : 138.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 115.0) no description available & (reliability: 276.0) & (original description: Putative pco133413, Description = RNA-binding protein 39, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold25061_3679-11508' '(at5g56140 : 391.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36801 : 216.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 782.0) & (original description: Putative At5g56140, Description = KH domain-containing protein At5g56140, PFAM = PF16544)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold27151_15032-20163' '(at2g37340 : 181.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00076;PF00098;PF00098)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold28852_1197-5397' '(at3g13224 : 241.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 148.0) no description available & (reliability: 482.0) & (original description: Putative GTBP2, Description = G-strand specific single-stranded telomere-binding protein 2, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold29721_7978-11669' '(at3g07810 : 363.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 208.0) no description available & (p19682|roc3_nicsy : 86.3) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 80.5) no description available & (reliability: 726.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold31302_1-7982' '(at5g15270 : 112.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 106.0) no description available & (reliability: 224.0) & (original description: Putative PGSC0003DMG400025983, Description = RNA-binding KH domain-containing protein isoform 2, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold32036_756-7370' '(at3g21215 : 329.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 5454 Blast hits to 2765 proteins in 341 species: Archae - 4; Bacteria - 269; Metazoa - 1333; Fungi - 651; Plants - 2326; Viruses - 357; Other Eukaryotes - 514 (source: NCBI BLink). & (gnl|cdd|36670 : 148.0) no description available & (reliability: 658.0) & (original description: Putative prp3, Description = Proline rich protein 3, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold33592_16268-20173' '(at4g35785 : 128.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 81.8) no description available & (reliability: 256.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold33748_9333-16435' '(gnl|cdd|38156 : 120.0) no description available & (at5g47210 : 89.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold33873_464-5267' '(gnl|cdd|39859 : 338.0) no description available & (q27k34|pla2_orysa : 265.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 246.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 492.0) & (original description: Putative TE1, Description = Protein terminal ear1, PFAM = PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold34754_1-3892' '(at3g13224 : 247.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 148.0) no description available & (p28644|roc1_spiol : 85.9) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 494.0) & (original description: Putative rbp, Description = RNA recognition motif containing protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold35090_8828-18238' '(at3g04610 : 414.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 142.0) no description available & (reliability: 828.0) & (original description: Putative FLK, Description = Flowering locus K homology domain, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold37967_6188-13228' '(at1g80930 : 813.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 752.0) no description available & (gnl|cdd|86149 : 108.0) no description available & (reliability: 1626.0) & (original description: Putative CWC22, Description = Cwc22 pre-mRNA splicing factor, PFAM = PF02847;PF02854)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold41293_3806-7536' '(at5g19030 : 99.4) RNA-binding (RRM/RBD/RNP motifs) family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400030795, Description = BnaAnng22790D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold44592_5166-10489' '(at5g59950 : 192.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 135.0) no description available & (reliability: 384.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold45242_10417-17064' '(at1g17640 : 218.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 187.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 94.0) no description available & (reliability: 436.0) & (original description: Putative RNP, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold52565_3019-13755' '(at4g21670 : 976.0) encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.; C-terminal domain phosphatase-like 1 (CPL1); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits to 317 proteins in 105 species: Archae - 0; Bacteria - 31; Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35544 : 249.0) no description available & (reliability: 1952.0) & (original description: Putative CPL1, Description = RNA polymerase II C-terminal domain phosphatase-like 1, PFAM = PF03031;PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold52607_9556-14240' '(at1g76460 : 196.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 144.0) no description available & (reliability: 392.0) & (original description: Putative At1g20880, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold54642_418-4882' '(at2g26695 : 161.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 86.7) no description available & (reliability: 322.0) & (original description: Putative At2g26695, Description = At2g26695, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold55134_614-6102' '(at4g17720 : 278.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold55950_1-7897' '(at1g75670 : 213.0) DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At1g75670, Description = DNA-directed RNA polymerase, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold56507_4533-8580' '(at5g55670 : 110.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 220.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold58196_1-12172' '(at1g55140 : 229.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.2) no description available & (reliability: 450.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold58926_5189-8803' '(at1g09700 : 82.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold61167_3528-10290' '(p19684|roc5_nicsy : 455.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at3g52380 : 276.0) chloroplast RNA-binding protein; chloroplast RNA-binding protein 33 (CP33); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 514069 Blast hits to 499112 proteins in 22048 species: Archae - 10752; Bacteria - 302541; Metazoa - 101965; Fungi - 16255; Plants - 33338; Viruses - 35348; Other Eukaryotes - 13870 (source: NCBI BLink). & (gnl|cdd|35349 : 92.8) no description available & (gnl|cdd|47687 : 80.3) no description available & (reliability: 552.0) & (original description: Putative CP33, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold61978_2844-11363' '(at2g28380 : 322.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative DBR4, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold62355_1-11254' '(at5g02530 : 146.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (gnl|cdd|35753 : 118.0) no description available & (reliability: 292.0) & (original description: Putative aly, Description = RNA and export factor-binding protein 2, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold62549_720-10032' '(at1g09230 : 316.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative SNRNP65, Description = U11/U12 small nuclear ribonucleoprotein 65 kDa protein, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold70505_160-8280' '(at3g04500 : 170.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 137.0) no description available & (reliability: 340.0) & (original description: Putative acp2, Description = RNA-binding protein 42, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold71545_1-5481' '(at3g04500 : 208.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 174.0) no description available & (reliability: 416.0) & (original description: Putative acp2, Description = RNA-binding protein 42, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold73345_1-6871' '(at4g11970 : 305.0) YTH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 30 (TAIR:AT1G30460.1). & (gnl|cdd|37113 : 210.0) no description available & (gnl|cdd|67749 : 130.0) no description available & (reliability: 610.0) & (original description: Putative At4g11970, Description = YTH family protein, PFAM = PF04146)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold74935_3017-7422' '(at5g55550 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 189.0) no description available & (reliability: 448.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold75978_2927-5940' '(at3g56860 : 139.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 90.2) no description available & (reliability: 278.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold76700_1-5286' '(at5g61030 : 132.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (p49310|grp1_sinal : 81.3) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold78383_775-7489' '(at5g46250 : 250.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 1643 Blast hits to 1641 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 943; Fungi - 256; Plants - 299; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37066 : 227.0) no description available & (gnl|cdd|47984 : 117.0) no description available & (reliability: 500.0) & (original description: Putative LARP6A, Description = La-related protein 6A, PFAM = PF00076;PF05383)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold96043_532-3460' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 88.6) no description available & (gnl|cdd|35331 : 86.0) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.3scaffold126044_1-1841' '(at3g10400 : 176.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative SNRNP31, Description = U11/U12 small nuclear ribonucleoprotein 31 kDa protein, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold27_966501-982696' '(at1g09230 : 409.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative SNRNP65, Description = U11/U12 small nuclear ribonucleoprotein 65 kDa protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold60_317958-326228' '(at4g28990 : 117.0) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative BnaA01g07930D, Description = BnaA01g07930D protein, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold70_1033849-1363366' '(at1g29400 : 573.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 281.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold231_204518-208340' '(gnl|cdd|35753 : 131.0) no description available & (at5g02530 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (reliability: 250.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold284_816407-827516' '(at1g17370 : 571.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 1132.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold448_2475-9059' '(at4g16830 : 149.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 21958 Blast hits to 10880 proteins in 1019 species: Archae - 12; Bacteria - 7276; Metazoa - 6848; Fungi - 1552; Plants - 2999; Viruses - 314; Other Eukaryotes - 2957 (source: NCBI BLink). & (gnl|cdd|38156 : 132.0) no description available & (reliability: 298.0) & (original description: Putative rgga, Description = Nuclear RNA binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold453_36733-43820' '(at3g15010 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 102.0) no description available & (p82277|rrp2_spiol : 87.4) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 314.0) & (original description: Putative TCM_024877, Description = RNA-binding family protein isoform 1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold589_331407-339608' '(at3g14450 : 327.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076;PF07145)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold617_550151-552872' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 93.2) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 258.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold617_550169-573595' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.3) no description available & (gnl|cdd|35331 : 86.7) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold625_135687-150799' '(gnl|cdd|35340 : 116.0) no description available & (at4g00830 : 90.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 180.2) & (original description: Putative pco093723, Description = Heterogeneous nuclear ribonucleoprotein A1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold625_141857-150877' '(gnl|cdd|35340 : 118.0) no description available & (at4g00830 : 93.6) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 187.2) & (original description: Putative pco093723, Description = Putative RNA-binding protein 46-like, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold745_387166-407678' '(at5g09880 : 431.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 378.0) no description available & (reliability: 862.0) & (original description: Putative RBM39, Description = RBM39, PFAM = PF00076;PF00076;PF15519)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold823_403262-415994' '(at2g44710 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 172.0) no description available & (reliability: 348.0) & (original description: Putative Os07g0180800, Description = Putative nucleolin 2-like, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold889_405453-411742' '(gnl|cdd|38156 : 139.0) no description available & (at4g17520 : 112.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative RggA, Description = Nuclear RNA binding protein A, PFAM = PF09598;PF04774)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold1213_419632-428461' '(at2g25970 : 247.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (gnl|cdd|36889 : 157.0) no description available & (reliability: 494.0) & (original description: Putative At2g25970, Description = F17H15.1/F17H15.1, PFAM = PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold1257_450118-467887' '(at2g21440 : 662.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 324.0) no description available & (reliability: 1324.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold1288_399483-421191' '(at5g15270 : 242.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 205.0) no description available & (reliability: 484.0) & (original description: Putative PCBP, Description = RNA-binding KH domain-containing protein isoform 1, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold1427_417662-422465' '(gnl|cdd|39859 : 339.0) no description available & (q27k34|pla2_orysa : 265.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 246.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 492.0) & (original description: Putative TE1, Description = Protein terminal ear1, PFAM = PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold1653_122435-127461' '(at3g21100 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At3g21100, Description = Putative uncharacterized protein At3g21100, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2186_228963-360042' '(at3g04500 : 236.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 201.0) no description available & (reliability: 472.0) & (original description: Putative v1g108798, Description = Predicted protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2221_202682-214853' '(at5g16260 : 453.0) Encodes a RNA binding protein ELF9 (EARLY FLOWERING9). Loss of ELF9 function in the Wassilewskija ecotype causes early flowering in short days. ELF9 reduces SOC1 (SUPPRESSOR OF OVEREXPRESSION OF CO1) transcript levels, possibly via nonsense-mediated mRNA decay.; EARLY FLOWERING 9 (ELF9); FUNCTIONS IN: mRNA binding, RNA binding; INVOLVED IN: negative regulation of flower development, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), GYF (InterPro:IPR003169); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36761 : 281.0) no description available & (reliability: 906.0) & (original description: Putative Sb05g002130, Description = Putative uncharacterized protein Sb05g002130, PFAM = PF14237;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2238_337613-346810' '(at3g52660 : 405.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 335.0) no description available & (reliability: 810.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2738_148885-160677' '(at2g28380 : 280.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2809_24299-27071' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 90.5) no description available & (gnl|cdd|35331 : 86.3) no description available & (reliability: 260.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold2897_26628-35684' '(at5g04430 : 297.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 229.0) no description available & (reliability: 594.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold3158_230876-241898' '(at5g01270 : 823.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 265.0) no description available & (reliability: 1646.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF03031;PF00035)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold3311_200933-207147' '(at1g29400 : 684.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 191.0) no description available & (q27k34|pla2_orysa : 124.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1368.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF04059;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold3534_155243-158799' '(at3g13180 : 148.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 96.2) no description available & (gnl|cdd|30493 : 83.9) no description available & (reliability: 296.0) & (original description: Putative BnaA01g29950D, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01189)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold3708_6924-18661' '(at3g54230 : 662.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (reliability: 1324.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF01585;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold4272_199295-202132' '(at2g26695 : 151.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 82.5) no description available & (reliability: 302.0) & (original description: Putative At2g26695, Description = At2g26695, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold4559_32647-141893' '(at5g04430 : 105.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 92.4) no description available & (reliability: 210.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold4851_236392-240437' '(at5g55670 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (gnl|cdd|40046 : 86.3) no description available & (reliability: 304.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold5066_76398-82843' '(gnl|cdd|38156 : 139.0) no description available & (at4g17520 : 134.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold5411_119578-126901' '(at2g44710 : 276.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 172.0) no description available & (gnl|cdd|34868 : 81.7) no description available & (reliability: 552.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold5499_30141-41161' '(at1g17370 : 538.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1076.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold5643_15924-19398' '(gnl|cdd|37351 : 193.0) no description available & (at1g80930 : 190.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative cwc22, Description = Pre-mRNA-splicing factor cwc22, PFAM = )' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold5650_123793-129138' '(at5g61030 : 116.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative GRP, Description = RNA-binding (RRM/RBD/RNP motif) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold6691_32427-51686' '(at5g25060 : 1007.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 737.0) no description available & (reliability: 2014.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF00076;PF01805;PF08312)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold6787_32779-36085' '(at5g19030 : 80.5) RNA-binding (RRM/RBD/RNP motifs) family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400030795, Description = At5g19030, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold7546_28488-33695' '(at1g21320 : 132.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BnaA07g37330D, Description = BnaA07g37330D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold7768_48224-55428' '(at2g44710 : 273.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 167.0) no description available & (gnl|cdd|34868 : 89.0) no description available & (reliability: 546.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold7926_39072-42376' '(at3g26420 : 110.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49311|grp2_sinal : 83.6) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 220.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'nbv0.5scaffold9192_3328-11032' '(at2g17975 : 267.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT2G26695.1); Has 1281 Blast hits to 744 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 88; Plants - 606; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|39399 : 104.0) no description available & (reliability: 534.0) & (original description: Putative Sb06g000870, Description = Putative uncharacterized protein Sb06g000870, PFAM = PF00641;PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben044scf00000391ctg017_92931-97982' '(gnl|cdd|39859 : 346.0) no description available & (q27k34|pla2_orysa : 270.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 249.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 136.0) no description available & (reliability: 498.0) & (original description: Putative TEL2, Description = Terminal ear1-like 2 protein, PFAM = PF04059;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00002011ctg011_10775-14744' '(at4g10110 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (gnl|cdd|35353 : 106.0) no description available & (reliability: 304.0) & (original description: Putative Os01g0876500, Description = Os01g0876500 protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00002447ctg009_1850-5530' '(at5g61030 : 121.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 242.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00002658ctg002_2536-5118' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.7) no description available & (gnl|cdd|35331 : 88.7) no description available & (reliability: 258.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00002863ctg017_5594-8976' '(at2g26695 : 151.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 82.1) no description available & (reliability: 302.0) & (original description: Putative Os06g0141200, Description = Os06g0141200 protein, PFAM = PF00641;PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben044scf00003057ctg019_191-5032' '(at2g26695 : 159.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 88.3) no description available & (reliability: 318.0) & (original description: Putative umc1283, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben044scf00003057ctg021_1916-3929' '(at2g26695 : 153.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 86.3) no description available & (reliability: 306.0) & (original description: Putative Sb03g024900, Description = Putative uncharacterized protein Sb03g024900, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben044scf00003563ctg002_1791-6018' '(at4g09040 : 183.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|35333 : 84.7) no description available & (q08935|roc1_nicsy : 80.9) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 366.0) & (original description: Putative At4g09040, Description = At4g09040, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00003895ctg002_2273-9556' '(gnl|cdd|35371 : 149.0) no description available & (at1g78260 : 140.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47687 : 82.6) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400030803, Description = RNA-binding protein 38, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00003996ctg002_23425-31319' '(at1g60650 : 153.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 996832 Blast hits to 989721 proteins in 35749 species: Archae - 21265; Bacteria - 589617; Metazoa - 208621; Fungi - 26263; Plants - 58603; Viruses - 68007; Other Eukaryotes - 24456 (source: NCBI BLink). & (p10979|grpa_maize : 95.9) Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea mays (Maize) & (gnl|cdd|47687 : 86.8) no description available & (reliability: 306.0) & (original description: Putative RZ1B, Description = Glycine-rich RNA-binding protein RZ1B, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00004226ctg006_1294-6191' '(at5g59950 : 110.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 93.9) no description available & (reliability: 220.0) & (original description: Putative aly, Description = RNA and export factor-binding protein 2, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'niben044scf00004333ctg026_944-7413' '(at1g22910 : 178.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G33470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 158.0) no description available & (reliability: 356.0) & (original description: Putative Sb03g041530, Description = Putative uncharacterized protein Sb03g041530, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00004629ctg001_10175-16839' '(at2g44710 : 277.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 168.0) no description available & (gnl|cdd|34868 : 82.8) no description available & (reliability: 554.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00004960ctg001_3352-8706' '(at5g15270 : 525.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 1050.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00005034ctg002_4700-10497' '(at1g09700 : 203.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben044scf00005580ctg002_14020-19424' '(at3g51950 : 230.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00005890ctg008_2354-6176' '(gnl|cdd|35753 : 139.0) no description available & (at5g02530 : 126.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (reliability: 252.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00006067ctg013_3737-11081' '(at3g55340 : 243.0) Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.; phragmoplastin interacting protein 1 (PHIP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 17490 Blast hits to 13137 proteins in 598 species: Archae - 10; Bacteria - 621; Metazoa - 8175; Fungi - 2466; Plants - 2451; Viruses - 16; Other Eukaryotes - 3751 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative NCL, Description = BnaA09g34920D protein, PFAM = PF00076;PF00076;PF00098)' T
'27.4' 'RNA.RNA binding' 'niben044scf00006142ctg030_1-7505' '(at5g15270 : 487.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 292.0) no description available & (reliability: 974.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00007081ctg010_1-6490' '(at4g10610 : 196.0) RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).; RNA-BINDING PROTEIN 37 (RBP37); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 11 (TAIR:AT1G32790.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00007742ctg002_4752-10844' '(at5g37720 : 178.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 128.0) no description available & (reliability: 356.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'niben044scf00008452ctg009_1-11398' '(at5g04430 : 329.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 241.0) no description available & (reliability: 658.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00008631ctg002_4753-13207' '(at2g25970 : 228.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (gnl|cdd|36889 : 155.0) no description available & (reliability: 456.0) & (original description: Putative At2g25970, Description = F17H15.1/F17H15.1, PFAM = PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00009083ctg008_667-17703' '(at2g21440 : 657.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 320.0) no description available & (reliability: 1314.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00011663ctg002_3706-12046' '(at4g28990 : 84.7) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative L484_001933, Description = TATA-binding protein-associated factor 2N, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben044scf00012146ctg006_2299-6917' '(at1g80930 : 484.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 463.0) no description available & (gnl|cdd|86149 : 110.0) no description available & (reliability: 968.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = PF02854)' T
'27.4' 'RNA.RNA binding' 'niben044scf00012208ctg029_1-4301' '(at3g13224 : 241.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 129.0) no description available & (reliability: 482.0) & (original description: Putative rbp, Description = RNA recognition motif containing protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00012608ctg000_2977-7019' '(at4g35785 : 149.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 80.7) no description available & (reliability: 298.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00012693ctg004_1-6001' '(at5g53060 : 587.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1). & (gnl|cdd|37401 : 215.0) no description available & (reliability: 1174.0) & (original description: Putative BnaA02g10500D, Description = BnaA02g10500D protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00012940ctg003_2028-8934' '(at2g38610 : 377.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 211.0) no description available & (gnl|cdd|29005 : 148.0) no description available & (reliability: 742.0) & (original description: Putative qkib, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00013051ctg010_4205-12043' '(at3g25470 : 327.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 225.0) no description available & (reliability: 654.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01728;PF01479)' T
'27.4' 'RNA.RNA binding' 'niben044scf00015409ctg008_1-2699' '(at5g61030 : 136.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q08937|roc2_nicsy : 95.1) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 90.3) no description available & (reliability: 272.0) & (original description: Putative RBG3, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00016826ctg000_4996-12176' '(at1g73530 : 134.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaC02g22240D, Description = BnaC02g22240D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00017222ctg012_282-3635' '(at3g04610 : 198.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00017296ctg002_5045-8385' '(at2g26695 : 106.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At2g26695, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben044scf00017465ctg001_2651-5848' '(at4g13850 : 130.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|47687 : 88.0) no description available & (gnl|cdd|35371 : 80.5) no description available & (reliability: 260.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00018442ctg004_14054-19855' '(at1g76460 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 162.0) no description available & (reliability: 590.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00018646ctg010_100-5326' '(at3g19090 : 280.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 258.0) no description available & (gnl|cdd|47984 : 86.0) no description available & (reliability: 560.0) & (original description: Putative LARP6C, Description = La-related protein 6C, PFAM = PF07145;PF05383;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00018787ctg000_900-9199' '(at5g19960 : 160.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (reliability: 320.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00019506ctg007_1-6099' '(at1g32790 : 347.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00020321ctg006_18129-24833' '(at3g13700 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 244.0) no description available & (reliability: 590.0) & (original description: Putative BnaC05g39630D, Description = BnaC05g39630D protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00020493ctg000_1095-5589' '(at1g21320 : 153.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative RBP2, Description = RNA-binding protein 2, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00020580ctg004_1-4054' '(gnl|cdd|37351 : 475.0) no description available & (at1g80930 : 470.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|86149 : 111.0) no description available & (reliability: 940.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = PF02854)' T
'27.4' 'RNA.RNA binding' 'niben044scf00022745ctg009_1-10030' '(at3g54230 : 588.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (reliability: 1176.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00023967ctg003_23650-29883' '(at2g35410 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G09040.1); Has 25515 Blast hits to 17648 proteins in 833 species: Archae - 12; Bacteria - 2210; Metazoa - 12015; Fungi - 3602; Plants - 4930; Viruses - 0; Other Eukaryotes - 2746 (source: NCBI BLink). & (p19684|roc5_nicsy : 123.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35333 : 87.0) no description available & (reliability: 450.0) & (original description: Putative PGSC0003DMG400017519, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00024267ctg000_1-2659' '(at1g37140 : 117.0) a member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only.; MEI2 C-terminal RRM only like 1 (MCT1); CONTAINS InterPro DOMAIN/s: RNA recognition motif 2 (InterPro:IPR007201); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 1 (TAIR:AT3G26120.1); Has 331 Blast hits to 331 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 29; Plants - 216; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|39859 : 114.0) no description available & (q27k34|pla2_orysa : 111.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative LHD2, Description = MEI2-like protein 1, PFAM = PF04059)' T
'27.4' 'RNA.RNA binding' 'niben044scf00025779ctg004_43229-46726' '(at3g12640 : 124.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA01g30430D, Description = Os04g0306800 protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00027081ctg024_10475-14931' '(at3g54770 : 180.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, gynoecium, carpel, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 164.0) no description available & (reliability: 360.0) & (original description: Putative ARP1, Description = Probable RNA-binding protein ARP1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00027296ctg001_1523-4638' '(at3g04500 : 82.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative At3g04500, Description = RNA-binding protein 42, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben044scf00027401ctg011_1-2295' '(at2g28380 : 254.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben044scf00027674ctg019_1-8657' '(at4g24270 : 553.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 280.0) no description available & (reliability: 1106.0) & (original description: Putative EMB140, Description = Squamous cell carcinoma antigen recognized by T-cells 3, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00028406ctg012_1-4290' '(at1g21320 : 129.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative NSRA, Description = Nuclear speckle RNA-binding protein A, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00030134ctg010_3062-10117' '(at5g09880 : 239.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 222.0) no description available & (reliability: 478.0) & (original description: Putative rbm39, Description = RNA-binding protein 39, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00030413ctg002_1-7821' '(gnl|cdd|35340 : 118.0) no description available & (at4g00830 : 91.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 183.4) & (original description: Putative Os12g0577001, Description = Os12g0577001 protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00031169ctg002_4255-9200' '(at1g07350 : 123.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (gnl|cdd|47687 : 81.0) no description available & (reliability: 222.0) & (original description: Putative SR45A, Description = Serine/arginine-rich splicing factor SR45a, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00032374ctg004_2766-11769' '(at2g37510 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|47687 : 80.7) no description available & (reliability: 250.0) & (original description: Putative LOC100283990, Description = RNA binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00034294ctg002_1618-5987' '(at3g07810 : 335.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 221.0) no description available & (q08935|roc1_nicsy : 83.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 670.0) & (original description: Putative msi1, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00034658ctg013_6013-21692' '(at5g15270 : 248.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 205.0) no description available & (reliability: 496.0) & (original description: Putative PCBP, Description = K Homology domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00035393ctg006_1-5954' '(at3g08620 : 362.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT2G38610.2); Has 1326 Blast hits to 1325 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 803; Fungi - 146; Plants - 286; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 207.0) no description available & (gnl|cdd|29005 : 145.0) no description available & (reliability: 724.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T
'27.4' 'RNA.RNA binding' 'niben044scf00036252ctg002_664-4669' '(at3g52660 : 405.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 336.0) no description available & (reliability: 810.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00038001ctg003_11882-25984' '(at5g04430 : 295.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 232.0) no description available & (reliability: 590.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben044scf00041452ctg000_6545-18795' '(at3g45630 : 351.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 221.0) no description available & (gnl|cdd|34774 : 218.0) no description available & (reliability: 690.0) & (original description: Putative NOT4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00043590ctg000_361-8288' '(at4g36960 : 417.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G07810.1); Has 349914 Blast hits to 333627 proteins in 17318 species: Archae - 7092; Bacteria - 199106; Metazoa - 73875; Fungi - 10838; Plants - 25006; Viruses - 24105; Other Eukaryotes - 9892 (source: NCBI BLink). & (gnl|cdd|39406 : 120.0) no description available & (reliability: 834.0) & (original description: Putative PHYPADRAFT_156290, Description = Predicted protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00047876ctg005_1-4725' '(at2g33435 : 134.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.1); Has 62164 Blast hits to 35633 proteins in 1636 species: Archae - 185; Bacteria - 4712; Metazoa - 29770; Fungi - 5811; Plants - 3284; Viruses - 214; Other Eukaryotes - 18188 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At2g33435, Description = Splicing factor U2AF 50 kDa subunit, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben044scf00048777ctg000_2747-12028' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00059813ctg000_262-3855' '(p49314|roc2_nicpl : 386.0) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 254.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35349 : 96.7) no description available & (gnl|cdd|31068 : 83.6) no description available & (reliability: 508.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben044scf00061512ctg000_1-7006' '(at1g09660 : 311.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36801 : 195.0) no description available & (gnl|cdd|29005 : 146.0) no description available & (reliability: 622.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf00025_128-7927' '(at5g46250 : 235.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 1643 Blast hits to 1641 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 943; Fungi - 256; Plants - 299; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37066 : 219.0) no description available & (gnl|cdd|47984 : 113.0) no description available & (reliability: 470.0) & (original description: Putative LARP6A, Description = La-related protein 6A, PFAM = PF05383)' T
'27.4' 'RNA.RNA binding' 'niben101scf00159_693771-703778' '(at3g07810 : 374.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 231.0) no description available & (reliability: 748.0) & (original description: Putative MSI2H, Description = RNA-binding protein Musashi homolog 2, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00163_24541-36737' '(at1g76460 : 293.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 160.0) no description available & (reliability: 586.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00215_309653-313381' '(at5g61030 : 136.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19683|roc4_nicsy : 98.2) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 92.6) no description available & (gnl|cdd|35339 : 81.2) no description available & (reliability: 272.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00234_122888-130219' '(at3g21215 : 321.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 5454 Blast hits to 2765 proteins in 341 species: Archae - 4; Bacteria - 269; Metazoa - 1333; Fungi - 651; Plants - 2326; Viruses - 357; Other Eukaryotes - 514 (source: NCBI BLink). & (gnl|cdd|36670 : 145.0) no description available & (reliability: 642.0) & (original description: Putative prp3, Description = Proline rich protein 3, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00262_306509-313121' '(at3g08620 : 363.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT2G38610.2); Has 1326 Blast hits to 1325 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 803; Fungi - 146; Plants - 286; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 211.0) no description available & (gnl|cdd|29005 : 150.0) no description available & (reliability: 726.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf00298_55188-73379' '(at3g14100 : 433.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (gnl|cdd|35370 : 133.0) no description available & (reliability: 866.0) & (original description: Putative ouBP, Description = Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00338_303368-310592' '(at3g55340 : 243.0) Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.; phragmoplastin interacting protein 1 (PHIP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 17490 Blast hits to 13137 proteins in 598 species: Archae - 10; Bacteria - 621; Metazoa - 8175; Fungi - 2466; Plants - 2451; Viruses - 16; Other Eukaryotes - 3751 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative NCL, Description = BnaA09g34920D protein, PFAM = PF00076;PF00076;PF00098)' T
'27.4' 'RNA.RNA binding' 'niben101scf00341_287912-291942' '(at5g55670 : 150.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (gnl|cdd|40046 : 89.0) no description available & (reliability: 300.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00366_1155121-1161583' '(at1g67325 : 304.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1). & (reliability: 608.0) & (original description: Putative At1g67325, Description = RanBP2-type zinc finger protein At1g67325, PFAM = PF00641;PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf00414_1115640-1131307' '(at3g13180 : 758.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 355.0) no description available & (gnl|cdd|30493 : 265.0) no description available & (reliability: 1516.0) & (original description: Putative sun, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01029;PF01189)' T
'27.4' 'RNA.RNA binding' 'niben101scf00414_1126268-1129824' '(at3g13180 : 134.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 90.5) no description available & (reliability: 268.0) & (original description: Putative BnaA01g29950D, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01189)' T
'27.4' 'RNA.RNA binding' 'niben101scf00438_136623-149050' '(at2g43410 : 515.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35345 : 91.9) no description available & (reliability: 1030.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF00076;PF00076;PF00076;PF07744)' T
'27.4' 'RNA.RNA binding' 'niben101scf00508_881161-891151' '(at1g75670 : 211.0) DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At1g75670, Description = DNA-directed RNA polymerase, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben101scf00574_1104849-1108033' '(gnl|cdd|35337 : 179.0) no description available & (at5g12190 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G14870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative sap14, Description = Pre-mRNA branch site protein p14, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00661_288850-305341' '(at1g70200 : 185.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 4744 Blast hits to 3664 proteins in 382 species: Archae - 19; Bacteria - 294; Metazoa - 1723; Fungi - 497; Plants - 212; Viruses - 61; Other Eukaryotes - 1938 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative PGSC0003DMG400015575, Description = F20P5.8, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben101scf00671_65252-69501' '(at5g66010 : 268.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|36579 : 166.0) no description available & (reliability: 536.0) & (original description: Putative Os11g0133600, Description = Heterogeneous nuclear ribonucleoprotein, putative, expressed, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00705_515426-533700' '(at4g24270 : 765.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 402.0) no description available & (gnl|cdd|34710 : 95.6) no description available & (reliability: 1530.0) & (original description: Putative EMB140, Description = Protein embryo defective 140, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00739_204779-231357' '(at2g26695 : 160.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 87.1) no description available & (reliability: 320.0) & (original description: Putative umc1283, Description = Uncharacterized RNA-binding protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf00739_275013-277949' '(at2g26695 : 149.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 84.0) no description available & (reliability: 298.0) & (original description: Putative umc1283, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf00739_275178-282737' '(at2g26695 : 155.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 84.0) no description available & (reliability: 310.0) & (original description: Putative BnaA07g12870D, Description = BnaA07g12870D protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf00744_195353-209420' '(at1g09700 : 184.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf00755_31866-42091' '(at3g04610 : 372.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 131.0) no description available & (reliability: 744.0) & (original description: Putative flk, Description = Poly(RC)-binding protein 1, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf00825_456219-463465' '(at1g29400 : 725.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 360.0) no description available & (gnl|cdd|67666 : 193.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'niben101scf00856_23297-33346' '(at3g04610 : 399.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 142.0) no description available & (reliability: 798.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf00870_1801477-1807309' '(at1g17640 : 219.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 174.0) no description available & (p19682|roc3_nicsy : 101.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 87.8) no description available & (reliability: 438.0) & (original description: Putative Os08g0492100, Description = Os08g0492100 protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00892_109970-115110' '(at4g20030 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative PGSC0003DMG400009433, Description = At4g20030, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00929_63150-67295' '(p49310|grp1_sinal : 129.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 125.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 85.6) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 250.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf00938_131087-139526' '(at5g04600 : 229.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39409 : 142.0) no description available & (reliability: 458.0) & (original description: Putative nifk, Description = Ribosomal biogenesis protein Gar2, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01001_12791-18224' '(at3g51950 : 245.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative At3g51950, Description = Zinc finger CCCH domain-containing protein 46, PFAM = PF00076;PF00642)' T
'27.4' 'RNA.RNA binding' 'niben101scf01009_298394-303667' '(at2g37340 : 195.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01033_273862-283284' '(at1g70650 : 247.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 206.0) no description available & (gnl|cdd|34682 : 90.7) no description available & (reliability: 494.0) & (original description: Putative UEV1B, Description = Ubiquitin-conjugating enzyme E2 variant 1B, PFAM = PF00179)' T
'27.4' 'RNA.RNA binding' 'niben101scf01037_101488-105686' '(at3g08000 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 3547 Blast hits to 3487 proteins in 342 species: Archae - 0; Bacteria - 132; Metazoa - 639; Fungi - 851; Plants - 1534; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative GRP1, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01056_16530-144020' '(at5g25060 : 1071.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 766.0) no description available & (reliability: 2142.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF00076;PF08312;PF01805)' T
'27.4' 'RNA.RNA binding' 'niben101scf01063_377604-387821' '(at4g17720 : 281.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01101_393516-408045' '(at5g01270 : 792.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 266.0) no description available & (reliability: 1584.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF00035;PF03031)' T
'27.4' 'RNA.RNA binding' 'niben101scf01109_35666-58208' '(at1g32790 : 386.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01109_68121-75777' '(at1g32790 : 342.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01111_42697-49973' '(at4g11970 : 343.0) YTH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 30 (TAIR:AT1G30460.1). & (gnl|cdd|37113 : 252.0) no description available & (gnl|cdd|67749 : 129.0) no description available & (reliability: 686.0) & (original description: Putative v1g17350, Description = Predicted protein, PFAM = PF04146)' T
'27.4' 'RNA.RNA binding' 'niben101scf01181_259535-263170' '(at1g09700 : 81.3) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf01190_227377-240805' '(q27k34|pla2_orysa : 120.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 112.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39859 : 106.0) no description available & (gnl|cdd|67666 : 88.2) no description available & (reliability: 224.0) & (original description: Putative TEL1, Description = Terminal EAR1-like 1, PFAM = PF04059)' T
'27.4' 'RNA.RNA binding' 'niben101scf01234_46539-51489' '(at3g07810 : 353.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 230.0) no description available & (q08935|roc1_nicsy : 88.2) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 83.2) no description available & (reliability: 706.0) & (original description: Putative At5g47620, Description = Putative RNA-binding protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01240_714535-739398' '(at2g26695 : 107.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative At2g26695, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf01240_737132-740338' '(at2g26695 : 153.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 83.2) no description available & (reliability: 306.0) & (original description: Putative Os01g0555100, Description = Os01g0555100 protein, PFAM = PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf01289_376686-381704' '(at3g54770 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, gynoecium, carpel, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 158.0) no description available & (reliability: 348.0) & (original description: Putative BnaA04g27710D, Description = BnaA04g27710D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01305_201369-218288' '(at1g80930 : 790.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 766.0) no description available & (gnl|cdd|86149 : 109.0) no description available & (reliability: 1580.0) & (original description: Putative CWC22, Description = Cwc22 pre-mRNA splicing factor, PFAM = PF02854;PF02847)' T
'27.4' 'RNA.RNA binding' 'niben101scf01365_71351-79174' '(at1g51510 : 174.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 163.0) no description available & (reliability: 348.0) & (original description: Putative tsu, Description = RNA-binding protein 8A, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01414_238618-245008' '(at1g29400 : 686.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 350.0) no description available & (gnl|cdd|67666 : 189.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1372.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'niben101scf01448_204578-210335' '(at3g27700 : 492.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01517_429420-437796' '(at3g14450 : 308.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01553_249962-260419' '(at4g36960 : 422.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G07810.1); Has 349914 Blast hits to 333627 proteins in 17318 species: Archae - 7092; Bacteria - 199106; Metazoa - 73875; Fungi - 10838; Plants - 25006; Viruses - 24105; Other Eukaryotes - 9892 (source: NCBI BLink). & (gnl|cdd|39406 : 128.0) no description available & (p19682|roc3_nicsy : 84.3) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 844.0) & (original description: Putative BnaA03g53770D, Description = BnaA03g53770D protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01579_179086-184409' '(at5g59950 : 162.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 131.0) no description available & (reliability: 324.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01579_267128-272510' '(at3g46020 : 111.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59860.1); Has 998870 Blast hits to 994912 proteins in 36005 species: Archae - 21618; Bacteria - 598911; Metazoa - 204417; Fungi - 25050; Plants - 56514; Viruses - 69090; Other Eukaryotes - 23270 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaA02g06700D, Description = BnaA02g06700D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01611_819412-847163' '(at5g25060 : 1080.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 775.0) no description available & (reliability: 2160.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF08312;PF00076;PF01805)' T
'27.4' 'RNA.RNA binding' 'niben101scf01642_132314-140011' '(at4g03110 : 463.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 349.0) no description available & (reliability: 926.0) & (original description: Putative BRN1, Description = RNA-binding protein BRN1, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01727_364929-369930' '(at1g14340 : 202.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PGSC0003DMG400025609, Description = RNA recognition motif containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01734_9158-20319' '(at3g25470 : 387.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 270.0) no description available & (reliability: 774.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01479;PF01728)' T
'27.4' 'RNA.RNA binding' 'niben101scf01752_1047948-1053750' '(at3g07810 : 380.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 232.0) no description available & (q08935|roc1_nicsy : 82.8) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 760.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01759_412939-422174' '(at2g28380 : 297.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative DRB5, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf01785_123354-130593' '(at1g29400 : 593.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 363.0) no description available & (gnl|cdd|67666 : 196.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01812_233379-248627' '(at2g44710 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 171.0) no description available & (reliability: 348.0) & (original description: Putative Os07g0180800, Description = Putative nucleolin 2-like, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01818_236889-246404' '(at3g45630 : 361.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 220.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 712.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T
'27.4' 'RNA.RNA binding' 'niben101scf01866_94301-97184' '(at3g46020 : 96.3) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59860.1); Has 998870 Blast hits to 994912 proteins in 36005 species: Archae - 21618; Bacteria - 598911; Metazoa - 204417; Fungi - 25050; Plants - 56514; Viruses - 69090; Other Eukaryotes - 23270 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative MtrDRAFT_AC149210g20v2, Description = RNA-binding region RNP-1 (RNA recognition motif), PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01938_468271-471284' '(at3g56860 : 139.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 90.2) no description available & (reliability: 278.0) & (original description: Putative UBA1A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01948_70479-75550' '(p19682|roc3_nicsy : 480.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 285.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 107.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 570.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01982_84992-93196' '(at5g19960 : 136.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (reliability: 272.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01985_357385-365200' '(at4g03110 : 468.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 392.0) no description available & (reliability: 936.0) & (original description: Putative BRN1, Description = RNA-binding protein BRN1, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T
'27.4' 'RNA.RNA binding' 'niben101scf02001_96520-122950' '(at4g35785 : 146.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 292.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02048_107716-112716' '(at3g07810 : 323.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 224.0) no description available & (q08935|roc1_nicsy : 85.5) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 646.0) & (original description: Putative DAZAP1, Description = Daz-associated protein 1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02078_926130-933841' '(at1g17640 : 218.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 189.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 93.6) no description available & (reliability: 436.0) & (original description: Putative RNP, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02294_164453-172466' '(at1g51580 : 281.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 210.0) no description available & (reliability: 534.0) & (original description: Putative HEN4, Description = RNA-binding KH domain protein, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02399_128727-140330' '(gnl|cdd|37401 : 187.0) no description available & (at1g51580 : 183.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative PGSC0003DMG400016189, Description = RNA-binding KH domain-containing protein, putative isoform 4, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02407_147290-156852' '(at2g44710 : 499.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 165.0) no description available & (reliability: 998.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02468_87694-99303' '(at5g04430 : 332.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 238.0) no description available & (reliability: 664.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02471_499374-506911' '(at2g44710 : 476.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 173.0) no description available & (reliability: 952.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02475_886289-905678' '(at1g09230 : 385.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative SNRNP65, Description = RNA-binding protein 40, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02509_941672-952991' '(at3g12640 : 334.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (gnl|cdd|38906 : 189.0) no description available & (reliability: 668.0) & (original description: Putative At3g12640, Description = RNA binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076;PF01480)' T
'27.4' 'RNA.RNA binding' 'niben101scf02517_1668622-1678597' '(at5g19960 : 95.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02547_68436-76701' '(at5g06210 : 153.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 86.4) no description available & (q05966|grp10_brana : 81.3) Glycine-rich RNA-binding protein 10 - Brassica napus (Rape) & (reliability: 306.0) & (original description: Putative At5g06210, Description = Putative uncharacterized protein At5g06210, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02625_147996-157106' '(p19683|roc4_nicsy : 504.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 250.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 102.0) no description available & (gnl|cdd|47687 : 83.7) no description available & (reliability: 500.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02665_1528443-1536444' '(at2g38610 : 445.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 228.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 820.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T
'27.4' 'RNA.RNA binding' 'niben101scf02668_2335-7534' '(at5g12440 : 315.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G21100.2). & (reliability: 596.0) & (original description: Putative Os07g0682400, Description = Zinc finger CCCH domain-containing protein 53, PFAM = PF00642;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02669_551013-570546' '(at2g28380 : 291.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative DRB2, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf02774_332527-338281' '(at5g37720 : 179.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 127.0) no description available & (reliability: 358.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'niben101scf02797_54276-59866' '(at3g13224 : 249.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 150.0) no description available & (p49313|roc1_nicpl : 86.3) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 498.0) & (original description: Putative GTBP1, Description = G-strand specific single-stranded telomere-binding protein 1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02803_438799-441583' '(at3g10400 : 186.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative SNRNP31, Description = U11/U12 small nuclear ribonucleoprotein 31 kDa protein, PFAM = PF00076;PF00098)' T
'27.4' 'RNA.RNA binding' 'niben101scf02819_781311-796854' '(at5g04430 : 203.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 112.0) no description available & (reliability: 406.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02819_785803-788288' '(gnl|cdd|37402 : 128.0) no description available & (at5g04430 : 107.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02821_589845-596950' '(at5g46840 : 302.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative Sb01g000750, Description = Putative uncharacterized protein Sb01g000750, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02840_145429-152993' '(at5g15270 : 494.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 988.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02840_146722-150142' '(at5g15270 : 224.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 128.0) no description available & (reliability: 448.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02844_1278381-1286161' '(at5g46840 : 311.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative At5g46840, Description = At5g46840, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02864_691839-699319' '(at2g44710 : 275.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 168.0) no description available & (gnl|cdd|34868 : 94.8) no description available & (reliability: 550.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02892_183034-196914' '(at1g09660 : 323.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36801 : 196.0) no description available & (gnl|cdd|29005 : 146.0) no description available & (reliability: 646.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf02945_250462-257471' '(at3g16810 : 619.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|37261 : 372.0) no description available & (reliability: 1238.0) & (original description: Putative APUM24, Description = Pumilio homolog 24, PFAM = PF08144)' T
'27.4' 'RNA.RNA binding' 'niben101scf02947_79611-92223' '(at5g09880 : 440.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 378.0) no description available & (reliability: 880.0) & (original description: Putative RBM39, Description = RBM39, PFAM = PF15519;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02947_84420-87384' '(at5g09880 : 142.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 117.0) no description available & (reliability: 284.0) & (original description: Putative pco133413, Description = RNA-binding protein 39, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02949_384972-388915' '(at1g13190 : 203.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55670.1); Has 32447 Blast hits to 17825 proteins in 1064 species: Archae - 7; Bacteria - 12227; Metazoa - 10368; Fungi - 2543; Plants - 3608; Viruses - 174; Other Eukaryotes - 3520 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative F3F19.21, Description = F3F19.21 protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02971_14146-22694' '(at3g14450 : 332.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf02982_350032-354502' '(at4g13850 : 149.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03878|grp1_dauca : 96.7) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (gnl|cdd|47687 : 86.1) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 298.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03015_490276-518577' '(at5g15270 : 242.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 209.0) no description available & (reliability: 484.0) & (original description: Putative PCBP, Description = RNA-binding KH domain-containing protein isoform 1, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf03018_172094-175116' '(at3g56860 : 141.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 84.0) no description available & (reliability: 282.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03036_864366-872006' '(at2g43370 : 288.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U1 small nuclear ribonucleoprotein-70K (TAIR:AT3G50670.1); Has 272 Blast hits to 272 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35336 : 167.0) no description available & (reliability: 576.0) & (original description: Putative SNRNP35, Description = U11/U12 small nuclear ribonucleoprotein 35 kDa protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03080_110647-115849' '(gnl|cdd|37066 : 255.0) no description available & (at3g19090 : 240.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|47984 : 85.6) no description available & (reliability: 480.0) & (original description: Putative LARP6C, Description = La-related protein 6C, PFAM = PF05383;PF07145;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03213_31677-38857' '(at1g73530 : 133.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative BnaC02g22240D, Description = BnaC02g22240D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03214_20133-23489' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.0) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 258.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03254_1221284-1228071' '(at3g27700 : 492.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03273_346573-366806' '(at5g25060 : 994.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 735.0) no description available & (reliability: 1988.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF08312;PF00076;PF01805)' T
'27.4' 'RNA.RNA binding' 'niben101scf03273_352965-358400' '(at5g25060 : 189.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 177.0) no description available & (reliability: 378.0) & (original description: Putative RRC1, Description = U2 snRNP-associated SURP motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03300_215650-221158' '(gnl|cdd|37066 : 250.0) no description available & (at3g19090 : 242.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|47984 : 86.0) no description available & (reliability: 484.0) & (original description: Putative FIP1, Description = La-related protein 7, PFAM = PF05383;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03403_94644-100280' '(at1g09700 : 200.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf03526_138490-143493' '(at1g60000 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q08935|roc1_nicsy : 154.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|84495 : 84.1) no description available & (gnl|cdd|35349 : 83.2) no description available & (reliability: 540.0) & (original description: Putative rbp33, Description = 33 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03572_15117-20310' '(at3g21100 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03673_330971-335213' '(at5g66010 : 267.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|36579 : 165.0) no description available & (reliability: 534.0) & (original description: Putative Os11g0133600, Description = Heterogeneous nuclear ribonucleoprotein, putative, expressed, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03708_53316-58543' '(at1g70650 : 379.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|39399 : 112.0) no description available & (reliability: 758.0) & (original description: Putative At1g70650, Description = Zinc finger (Ran-binding) domain-containing protein, PFAM = PF00641;PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf03778_245147-251851' '(at3g13700 : 311.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 244.0) no description available & (reliability: 622.0) & (original description: Putative At3g13700, Description = RNA recognition motif-containing protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03863_52330-65627' '(at3g15010 : 160.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 100.0) no description available & (p82277|rrp2_spiol : 86.7) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 320.0) & (original description: Putative Ccrd_018189, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03918_16679-27235' '(at3g04500 : 255.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 206.0) no description available & (reliability: 510.0) & (original description: Putative v1g108798, Description = Predicted protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03932_401104-409954' '(at5g46190 : 550.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G18375.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37401 : 243.0) no description available & (reliability: 1100.0) & (original description: Putative At4g18375, Description = KH domain-containing protein At4g18375, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf03948_91284-107583' '(at3g04610 : 380.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 165.0) no description available & (reliability: 760.0) & (original description: Putative FLK, Description = Flowering locus K homology domain, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf03949_726806-733240' '(at1g33470 : 179.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 162.0) no description available & (reliability: 358.0) & (original description: Putative Sb03g041530, Description = Putative uncharacterized protein Sb03g041530, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03953_148970-151950' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 87.5) no description available & (gnl|cdd|31068 : 84.3) no description available & (reliability: 260.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03963_73499-79788' '(at5g04600 : 231.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39409 : 145.0) no description available & (reliability: 462.0) & (original description: Putative nifk, Description = Ribosomal biogenesis protein Gar2, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03978_948306-955506' '(at4g17720 : 254.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative BPA1, Description = Protein vip1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf03986_8291-12630' '(at4g17720 : 264.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative BPA1, Description = Protein vip1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04081_1140-11841' '(at4g19610 : 725.0) nucleotide binding;nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G08695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35333 : 458.0) no description available & (reliability: 1450.0) & (original description: Putative MRD1, Description = Multiple RNA-binding domain-containing protein 1, PFAM = PF00076;PF00076;PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04099_875535-884030' '(at1g32790 : 409.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04103_1027545-1036321' '(at4g28990 : 91.3) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative At4g28990, Description = TATA-binding protein-associated factor 2N, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben101scf04156_41830-48636' '(at5g53060 : 596.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1). & (gnl|cdd|37401 : 218.0) no description available & (reliability: 1192.0) & (original description: Putative BnaA02g10500D, Description = BnaA02g10500D protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf04285_451168-455642' '(at1g14340 : 215.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative PGSC0003DMG400025609, Description = RNA recognition motif containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04329_549086-559882' '(at3g52660 : 432.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 362.0) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 864.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04362_272460-280667' '(at5g04280 : 140.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT1G60650.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49310|grp1_sinal : 94.4) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 85.3) no description available & (reliability: 280.0) & (original description: Putative RZ1B, Description = Glycine-rich RNA-binding protein RZ1B, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04444_602592-606712' '(at5g55670 : 144.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 288.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04485_189874-194193' '(at4g14300 : 272.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G33410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39406 : 201.0) no description available & (gnl|cdd|31068 : 83.6) no description available & (reliability: 544.0) & (original description: Putative RNP1, Description = Heterogeneous nuclear ribonucleoprotein 1, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04528_1111018-1117614' '(at5g54580 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative Os08g0139000, Description = Os08g0139000 protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04582_167022-177192' '(at3g20930 : 383.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 19538 Blast hits to 16159 proteins in 695 species: Archae - 6; Bacteria - 989; Metazoa - 10059; Fungi - 2542; Plants - 4206; Viruses - 0; Other Eukaryotes - 1736 (source: NCBI BLink). & (gnl|cdd|47687 : 83.0) no description available & (reliability: 766.0) & (original description: Putative At3g20930, Description = Putative uncharacterized protein At3g20930, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04632_806432-811251' '(at5g06210 : 150.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05966|grp10_brana : 81.3) Glycine-rich RNA-binding protein 10 - Brassica napus (Rape) & (reliability: 300.0) & (original description: Putative At5g06210, Description = Putative uncharacterized protein At5g06210, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04653_244146-251031' '(p19683|roc4_nicsy : 486.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 249.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 102.0) no description available & (gnl|cdd|47687 : 83.0) no description available & (reliability: 498.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04754_374798-383808' '(at1g29400 : 691.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 187.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1382.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'niben101scf04847_188225-192354' '(at5g55670 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 278.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf04861_130268-149404' '(at2g21440 : 560.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 327.0) no description available & (reliability: 1120.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05173_40343-48142' '(gnl|cdd|38156 : 96.6) no description available & (at4g17520 : 94.7) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF09598;PF04774)' T
'27.4' 'RNA.RNA binding' 'niben101scf05306_288341-293600' '(at2g37340 : 200.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05308_55620-82208' '(gnl|cdd|35340 : 176.0) no description available & (at4g00830 : 135.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (gnl|cdd|84495 : 84.5) no description available & (reliability: 270.0) & (original description: Putative Sb08g019135, Description = Putative RNA-binding protein 46-like, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05308_65623-76931' '(gnl|cdd|35340 : 129.0) no description available & (at4g00830 : 105.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 210.0) & (original description: Putative Os12g0577001, Description = Os12g0577001 protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05354_411-8115' '(at2g17975 : 273.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT2G26695.1); Has 1281 Blast hits to 744 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 88; Plants - 606; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|39399 : 112.0) no description available & (reliability: 546.0) & (original description: Putative Sb06g000870, Description = Putative uncharacterized protein Sb06g000870, PFAM = PF00641;PF00641;PF00641)' T
'27.4' 'RNA.RNA binding' 'niben101scf05396_694375-697634' '(at3g15010 : 266.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 118.0) no description available & (reliability: 532.0) & (original description: Putative UBA2A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05412_293096-304118' '(at5g01270 : 792.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 263.0) no description available & (reliability: 1584.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF00035;PF03031)' T
'27.4' 'RNA.RNA binding' 'niben101scf05437_648393-654615' '(p19682|roc3_nicsy : 439.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 260.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35367 : 118.0) no description available & (gnl|cdd|47687 : 84.1) no description available & (reliability: 520.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05442_459397-463365' '(p49314|roc2_nicpl : 375.0) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 249.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35349 : 92.8) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 498.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05487_226935-238151' '(at3g04610 : 370.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 161.0) no description available & (reliability: 740.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf05516_243493-249957' '(at5g55550 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 188.0) no description available & (reliability: 448.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05519_90434-96486' '(at2g41060 : 287.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: UBP1-associated protein 2A (TAIR:AT3G56860.5); Has 20258 Blast hits to 14290 proteins in 711 species: Archae - 0; Bacteria - 976; Metazoa - 9998; Fungi - 2289; Plants - 4483; Viruses - 115; Other Eukaryotes - 2397 (source: NCBI BLink). & (gnl|cdd|39406 : 99.0) no description available & (reliability: 574.0) & (original description: Putative BnaC04g24810D, Description = BnaC04g24810D protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05528_184405-192208' '(at5g56140 : 384.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36801 : 216.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 768.0) & (original description: Putative At5g56140, Description = KH domain-containing protein At5g56140, PFAM = PF16544)' T
'27.4' 'RNA.RNA binding' 'niben101scf05553_465661-473567' '(gnl|cdd|35371 : 151.0) no description available & (at1g78260 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47687 : 83.4) no description available & (reliability: 274.0) & (original description: Putative glysoja_021766, Description = RNA-binding protein 38, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05694_32549-37832' '(p19684|roc5_nicsy : 439.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at3g52380 : 269.0) chloroplast RNA-binding protein; chloroplast RNA-binding protein 33 (CP33); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 514069 Blast hits to 499112 proteins in 22048 species: Archae - 10752; Bacteria - 302541; Metazoa - 101965; Fungi - 16255; Plants - 33338; Viruses - 35348; Other Eukaryotes - 13870 (source: NCBI BLink). & (gnl|cdd|35349 : 91.3) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 538.0) & (original description: Putative CP33, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf05726_121483-125305' '(at5g59950 : 96.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 95.9) no description available & (reliability: 193.4) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'niben101scf05841_148924-171242' '(at3g62800 : 164.0) Encodes a nuclear dsRNA-binding protein that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression.; double-stranded-RNA-binding protein 4; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 3 (TAIR:AT3G26932.2); Has 937 Blast hits to 871 proteins in 285 species: Archae - 0; Bacteria - 437; Metazoa - 161; Fungi - 4; Plants - 271; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative DBR4, Description = dsRNA-binding protein 2, PFAM = PF00035;PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf05855_365084-372683' '(at5g15270 : 109.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 107.0) no description available & (reliability: 218.0) & (original description: Putative glysoja_001001, Description = Poly(RC)-binding protein 4, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf05929_214374-273144' '(at5g43960 : 270.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35339 : 234.0) no description available & (q08935|roc1_nicsy : 152.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29630 : 111.0) no description available & (reliability: 520.0) & (original description: Putative BnaC09g17770D, Description = BnaC09g17770D protein, PFAM = PF00076;PF00076;PF00076;PF02136)' T
'27.4' 'RNA.RNA binding' 'niben101scf05963_17228-20574' '(at3g26420 : 137.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49311|grp2_sinal : 107.0) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 82.2) no description available & (reliability: 274.0) & (original description: Putative RZ1A, Description = Glycine-rich RNA-binding protein RZ1A, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06045_52306-97695' '(at1g55140 : 239.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.6) no description available & (reliability: 448.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T
'27.4' 'RNA.RNA binding' 'niben101scf06078_248033-256658' '(gnl|cdd|38156 : 136.0) no description available & (at5g47210 : 113.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'niben101scf06105_347286-351221' '(at4g10110 : 179.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (gnl|cdd|35353 : 108.0) no description available & (reliability: 358.0) & (original description: Putative At4g10110, Description = At4g10100, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06203_17991-20910' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 86.6) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06240_35489-41156' '(at3g26420 : 125.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49310|grp1_sinal : 90.9) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 81.4) no description available & (gnl|cdd|35371 : 80.9) no description available & (reliability: 250.0) & (original description: Putative RZ1A, Description = Glycine-rich RNA-binding protein RZ1A, PFAM = PF00076;PF00098)' T
'27.4' 'RNA.RNA binding' 'niben101scf06249_114429-119384' '(at1g51510 : 177.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 171.0) no description available & (reliability: 354.0) & (original description: Putative Y14, Description = Exon junction complex protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06276_2803-10424' '(at3g14450 : 328.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative CID9, Description = Polyadenylate-binding protein-interacting protein 9, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06291_359143-373457' '(at3g45630 : 368.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 222.0) no description available & (gnl|cdd|34774 : 220.0) no description available & (reliability: 722.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T
'27.4' 'RNA.RNA binding' 'niben101scf06332_219393-226531' '(at5g54580 : 138.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At5g54580, Description = Putative uncharacterized protein At5g54580, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf06376_90662-103221' '(at1g09700 : 88.2) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative Sb07g019380, Description = Putative uncharacterized protein Sb07g019380, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf06590_76568-82801' '(at3g45630 : 265.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|34774 : 133.0) no description available & (gnl|cdd|37279 : 131.0) no description available & (reliability: 508.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF14570)' T
'27.4' 'RNA.RNA binding' 'niben101scf06814_142623-146058' '(at1g80930 : 193.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 184.0) no description available & (reliability: 386.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = )' T
'27.4' 'RNA.RNA binding' 'niben101scf06990_154102-168028' '(at5g04430 : 333.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 243.0) no description available & (reliability: 666.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf07049_178136-187318' '(at2g44710 : 488.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 166.0) no description available & (reliability: 976.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07066_462722-472451' '(at2g42240 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 168.0) no description available & (reliability: 540.0) & (original description: Putative BnaC03g23650D, Description = BnaC03g23650D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07152_406136-416664' '(at5g04430 : 297.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 229.0) no description available & (reliability: 594.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf07163_257915-261803' '(at3g07810 : 374.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 241.0) no description available & (q08935|roc1_nicsy : 84.7) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 748.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07227_83409-88465' '(at2g37340 : 184.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07321_107705-132022' '(at4g24270 : 776.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 414.0) no description available & (gnl|cdd|34710 : 92.5) no description available & (reliability: 1552.0) & (original description: Putative EMB140, Description = Protein embryo defective 140, PFAM = PF05391;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07402_612515-618284' '(at5g37720 : 177.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 132.0) no description available & (reliability: 354.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF00076;PF13865)' T
'27.4' 'RNA.RNA binding' 'niben101scf07578_28492-33949' '(at4g09040 : 181.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|35333 : 86.6) no description available & (q08935|roc1_nicsy : 82.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 362.0) & (original description: Putative At4g09040, Description = At4g09040, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07580_841287-848181' '(at2g38610 : 379.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 208.0) no description available & (gnl|cdd|29005 : 148.0) no description available & (reliability: 742.0) & (original description: Putative how, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf07590_143731-152364' '(at1g32790 : 375.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07682_138848-145754' '(at3g07810 : 359.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 205.0) no description available & (p19682|roc3_nicsy : 82.4) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 718.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07704_49892-57144' '(at1g60650 : 159.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 996832 Blast hits to 989721 proteins in 35749 species: Archae - 21265; Bacteria - 589617; Metazoa - 208621; Fungi - 26263; Plants - 58603; Viruses - 68007; Other Eukaryotes - 24456 (source: NCBI BLink). & (gnl|cdd|47687 : 89.1) no description available & (p49311|grp2_sinal : 88.2) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 318.0) & (original description: Putative RZ1C, Description = Glycine-rich RNA-binding protein RZ1C, PFAM = PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07713_59899-69958' '(at3g07810 : 372.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 231.0) no description available & (q08935|roc1_nicsy : 80.1) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 744.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf07863_89968-93875' '(at4g35785 : 129.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 81.0) no description available & (reliability: 258.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf08142_2186-5547' '(at3g15010 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 101.0) no description available & (reliability: 590.0) & (original description: Putative UBA2A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf08156_672741-676180' '(at1g33520 : 314.0) Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;; modifier of snc1, 2 (MOS2); CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT4G25020.1); Has 453 Blast hits to 441 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 80; Plants - 100; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|39516 : 233.0) no description available & (reliability: 628.0) & (original description: Putative MOS2, Description = Protein MOS2, PFAM = PF12656)' T
'27.4' 'RNA.RNA binding' 'niben101scf08206_77066-83808' '(at1g32790 : 392.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF00076;PF00076;PF07145)' T
'27.4' 'RNA.RNA binding' 'niben101scf08357_277051-282414' '(at5g15270 : 526.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 1052.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf08368_511165-527455' '(at1g70650 : 245.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 201.0) no description available & (gnl|cdd|34682 : 91.9) no description available & (reliability: 490.0) & (original description: Putative spm2, Description = Ubiquitin-conjugating enzyme E2 variant 2, PFAM = PF00179)' T
'27.4' 'RNA.RNA binding' 'niben101scf08459_118301-137994' '(at1g53650 : 326.0) RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins.; CTC-interacting domain 8 (CID8); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 9 (TAIR:AT3G14450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf08478_30128-50271' '(at3g23900 : 282.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), RNA recognition motif, RNP-1 (InterPro:IPR000504), Immunoglobulin E-set (InterPro:IPR014756), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Filamin/ABP280 repeat-like (InterPro:IPR017868); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.1). & (gnl|cdd|47857 : 87.6) no description available & (reliability: 564.0) & (original description: Putative BnaA01g23470D, Description = BnaA01g23470D protein, PFAM = PF00076;PF00630)' T
'27.4' 'RNA.RNA binding' 'niben101scf08691_104583-109250' '(p49313|roc1_nicpl : 343.0) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 260.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35353 : 99.6) no description available & (gnl|cdd|47687 : 82.2) no description available & (reliability: 520.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf08772_365629-371975' '(at3g27700 : 528.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 1056.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf08926_727882-739130' '(at2g38610 : 418.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 214.0) no description available & (gnl|cdd|29005 : 144.0) no description available & (reliability: 820.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T
'27.4' 'RNA.RNA binding' 'niben101scf09268_154841-157649' '(q03878|grp1_dauca : 138.0) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35371 : 87.8) no description available & (gnl|cdd|31068 : 86.6) no description available & (reliability: 258.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09284_50339-62842' '(at3g54230 : 749.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (gnl|cdd|35376 : 82.5) no description available & (reliability: 1498.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF01585;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09317_98363-104652' '(gnl|cdd|38156 : 111.0) no description available & (at5g47210 : 89.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'niben101scf09321_246940-253656' '(at3g13700 : 316.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 250.0) no description available & (reliability: 632.0) & (original description: Putative At3g13700, Description = RNA recognition motif-containing protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09456_92564-99009' '(gnl|cdd|38156 : 110.0) no description available & (at5g47210 : 106.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'niben101scf09725_22593-28541' '(at5g32450 : 311.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09729_14306-18558' '(at5g55670 : 142.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 284.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09782_35636-42993' '(at4g35785 : 130.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 260.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf09906_285922-299544' '(at2g38610 : 389.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 206.0) no description available & (gnl|cdd|29005 : 141.0) no description available & (reliability: 756.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T
'27.4' 'RNA.RNA binding' 'niben101scf10067_209974-213185' '(at2g41060 : 209.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: UBP1-associated protein 2A (TAIR:AT3G56860.5); Has 20258 Blast hits to 14290 proteins in 711 species: Archae - 0; Bacteria - 976; Metazoa - 9998; Fungi - 2289; Plants - 4483; Viruses - 115; Other Eukaryotes - 2397 (source: NCBI BLink). & (gnl|cdd|39406 : 97.8) no description available & (reliability: 418.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf10498_65094-74846' '(at3g20890 : 235.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G66010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36579 : 215.0) no description available & (reliability: 470.0) & (original description: Putative HNRH1, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf10616_145259-156143' '(at5g61030 : 122.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 89.1) no description available & (p19683|roc4_nicsy : 85.1) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 244.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf10712_97893-104047' '(at2g37340 : 180.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf11443_257332-260438' '(at3g15010 : 199.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 81.7) no description available & (reliability: 398.0) & (original description: Putative UBA2C, Description = BnaA05g14580D protein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf11767_326894-335544' '(at3g14450 : 315.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076;PF07145)' T
'27.4' 'RNA.RNA binding' 'niben101scf12017_645974-659983' '(at3g59980 : 258.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 5867 Blast hits to 5867 proteins in 2108 species: Archae - 266; Bacteria - 4355; Metazoa - 277; Fungi - 157; Plants - 151; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (gnl|cdd|37452 : 194.0) no description available & (gnl|cdd|48401 : 170.0) no description available & (q9zts1|sym_orysa : 142.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative AIMP1, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T
'27.4' 'RNA.RNA binding' 'niben101scf12154_135663-159945' '(at5g59950 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 133.0) no description available & (reliability: 314.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf12560_57390-61743' '(at1g21320 : 155.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative RBP2, Description = RNA-binding protein 2, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf13141_290638-299329' '(at1g21320 : 132.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative c406, Description = RNA-binding protein with multiple splicing, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf13180_305907-313366' '(at1g76460 : 214.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 145.0) no description available & (gnl|cdd|47687 : 80.3) no description available & (reliability: 428.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf13929_2847-17956' '(at5g59950 : 161.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 132.0) no description available & (reliability: 322.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf14009_26877-32115' '(at5g40490 : 275.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 237026 Blast hits to 70789 proteins in 2918 species: Archae - 339; Bacteria - 59623; Metazoa - 97059; Fungi - 16957; Plants - 23804; Viruses - 2447; Other Eukaryotes - 36797 (source: NCBI BLink). & (gnl|cdd|39406 : 147.0) no description available & (p28644|roc1_spiol : 84.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 550.0) & (original description: Putative rbp, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf14017_108484-116950' '(at1g51510 : 172.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 168.0) no description available & (reliability: 344.0) & (original description: Putative tsu, Description = RNA-binding protein 8A, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf14180_144150-149887' '(at3g19090 : 265.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 247.0) no description available & (reliability: 530.0) & (original description: Putative BnaC05g33830D, Description = BnaC05g33830D protein, PFAM = PF05383;PF00076;PF07145)' T
'27.4' 'RNA.RNA binding' 'niben101scf14591_15174-32777' '(at3g52660 : 442.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 365.0) no description available & (reliability: 884.0) & (original description: Putative BnaA09g33060D, Description = BnaA09g33060D protein, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf15533_111323-134423' '(at4g21670 : 1006.0) encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.; C-terminal domain phosphatase-like 1 (CPL1); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits to 317 proteins in 105 species: Archae - 0; Bacteria - 31; Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35544 : 251.0) no description available & (reliability: 2012.0) & (original description: Putative CPL1, Description = RNA polymerase II C-terminal domain phosphatase-like 1, PFAM = PF00035;PF00035;PF03031)' T
'27.4' 'RNA.RNA binding' 'niben101scf15694_131321-136479' '(at2g37510 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|47687 : 80.3) no description available & (reliability: 250.0) & (original description: Putative LOC100283990, Description = RNA binding protein, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf16657_111795-121054' '(at1g17370 : 562.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 89.7) no description available & (reliability: 1120.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf16768_128488-132814' '(at3g13224 : 237.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 147.0) no description available & (reliability: 474.0) & (original description: Putative GTBP2, Description = G-strand specific single-stranded telomere-binding protein 2, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf16833_37522-41285' '(at5g61030 : 142.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19683|roc4_nicsy : 101.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.1) no description available & (reliability: 284.0) & (original description: Putative RBG3, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf17514_159229-168874' '(at4g00830 : 517.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (gnl|cdd|35340 : 380.0) no description available & (gnl|cdd|47687 : 91.4) no description available & (reliability: 1034.0) & (original description: Putative At4g00830, Description = AT4g00830/A_TM018A10_14, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf17652_50650-60927' '(at2g43410 : 513.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35345 : 90.4) no description available & (reliability: 1026.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF07744;PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf17947_71646-181592' '(at1g29400 : 687.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 347.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T
'27.4' 'RNA.RNA binding' 'niben101scf18000_52701-59422' '(at1g17370 : 608.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1194.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf19133_341092-349148' '(at1g21320 : 175.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative c406, Description = Putative uncharacterized protein c406, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf23355_169824-174773' '(q08935|roc1_nicsy : 345.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (at2g37220 : 263.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35353 : 102.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 526.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf23481_17119-23673' '(at5g09880 : 164.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 150.0) no description available & (reliability: 328.0) & (original description: Putative rbm23, Description = RNA-binding protein 39, PFAM = PF00076;PF10243)' T
'27.4' 'RNA.RNA binding' 'niben101scf26315_28752-36040' '(at2g28380 : 278.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative DRB2, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T
'27.4' 'RNA.RNA binding' 'niben101scf28181_11978-15429' '(at1g33520 : 325.0) Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;; modifier of snc1, 2 (MOS2); CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT4G25020.1); Has 453 Blast hits to 441 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 80; Plants - 100; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|39516 : 232.0) no description available & (reliability: 650.0) & (original description: Putative MOS2, Description = Protein MOS2, PFAM = PF12656)' T
'27.4' 'RNA.RNA binding' 'niben101scf32522_14156-17494' '(at4g13850 : 152.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03878|grp1_dauca : 95.9) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (gnl|cdd|47687 : 88.4) no description available & (gnl|cdd|35371 : 82.1) no description available & (reliability: 304.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T
'27.4' 'RNA.RNA binding' 'niben101scf34790_7964-17006' '(gnl|cdd|38156 : 114.0) no description available & (at4g16830 : 100.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 21958 Blast hits to 10880 proteins in 1019 species: Archae - 12; Bacteria - 7276; Metazoa - 6848; Fungi - 1552; Plants - 2999; Viruses - 314; Other Eukaryotes - 2957 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T
'27.4' 'RNA.RNA binding' 'niben101scf34874_16250-21994' '(at5g51410 : 359.0) LUC7 N_terminus domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1). & (gnl|cdd|66842 : 216.0) no description available & (gnl|cdd|36015 : 188.0) no description available & (reliability: 718.0) & (original description: Putative sato3, Description = Salt tolerance protein 3, PFAM = PF03194)' T
'27.4' 'RNA.RNA binding' 'niben101scf35572_107768-112256' '(at5g55550 : 220.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 195.0) no description available & (reliability: 440.0) & (original description: Putative msi1, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T
'27.1001' 'RNA' 'monomethylphosphate' 'RNA (actually small nuclear RNA)' M
'28' 'DNA' '' ''
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold129_159316-163036' '(gnl|cdd|36151 : 412.0) no description available & (at5g62410 : 411.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (gnl|cdd|73032 : 195.0) no description available & (reliability: 822.0) & (original description: Putative SMC2, Description = SMC2, PFAM = PF02463)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold1709_74028-91144' '(at5g57160 : 441.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 334.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 238.0) no description available & (reliability: 882.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF04679)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold2237_49484-58373' '(at5g35910 : 400.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 214.0) no description available & (gnl|cdd|30697 : 93.8) no description available & (reliability: 800.0) & (original description: Putative srm, Description = Exosome component 10, PFAM = PF01612;PF00570)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold3008_39737-56122' '(at1g65780 : 726.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 453.0) no description available & (gnl|cdd|31309 : 157.0) no description available & (reliability: 1452.0) & (original description: Putative At4g05540, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF02891;PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold5229_50516-58141' '(at1g48650 : 164.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative F23H14, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold7046_1342-16506' '(at3g18630 : 404.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|81482 : 353.0) no description available & (gnl|cdd|38205 : 341.0) no description available & (reliability: 808.0) & (original description: Putative UNG, Description = Uracil-DNA glycosylase, mitochondrial, PFAM = PF03167)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold9903_20860-47925' '(at3g06980 : 573.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 305.0) no description available & (gnl|cdd|30859 : 258.0) no description available & (p46942|db10_nicsy : 114.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1146.0) & (original description: Putative Os03g0108600, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold10715_33902-37915' '(at1g01370 : 81.6) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative H3, Description = Histone H3, PFAM = PF00125)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12119_5296-13817' '(at1g67630 : 704.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 437.0) no description available & (gnl|cdd|34811 : 212.0) no description available & (reliability: 1408.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = PF04042;PF08418)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12742_12259-42048' '(at2g28290 : 1130.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 849.0) no description available & (q7g8y3|isw2_orysa : 347.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 338.0) no description available & (reliability: 2260.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00271;PF14619;PF00176)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12742_16781-20518' '(at2g28290 : 94.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative CHR3, Description = ATP-dependent helicase SYD, PFAM = PF14619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14555_17988-40663' '(at4g00660 : 651.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 611.0) no description available & (gnl|cdd|30859 : 287.0) no description available & (p35683|if4a_orysa : 212.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1302.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14555_20103-32165' '(at4g00660 : 811.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 777.0) no description available & (gnl|cdd|30859 : 365.0) no description available & (p35683|if4a_orysa : 287.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1622.0) & (original description: Putative ste13, Description = Putative ATP-dependent RNA helicase ste13, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14844_24529-30794' '(at1g08260 : 719.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 704.0) no description available & (gnl|cdd|30766 : 154.0) no description available & (reliability: 1438.0) & (original description: Putative nimP, Description = DNA polymerase, PFAM = PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14886_37303-40080' '(at2g35920 : 120.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At2g35920, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17095_13363-19881' '(at3g53110 : 533.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 439.0) no description available & (gnl|cdd|30859 : 257.0) no description available & (p41380|if4a3_nicpl : 199.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1066.0) & (original description: Putative helC, Description = LOS4, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17149_29991-39363' '(o48901|dpod1_soybn : 721.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Glycine max (Soybean) & (at5g63960 : 701.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 564.0) no description available & (gnl|cdd|86240 : 283.0) no description available & (reliability: 1402.0) & (original description: Putative polD, Description = DNA polymerase, PFAM = PF03104)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17445_33235-41645' '(at5g44800 : 431.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative LOC100383315, Description = Chromodomain-helicase-DNA-binding protein 5, PFAM = PF06465)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold20156_1547-6301' '(at1g08130 : 318.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (gnl|cdd|36185 : 317.0) no description available & (gnl|cdd|80824 : 202.0) no description available & (reliability: 636.0) & (original description: Putative lig1, Description = DNA ligase, PFAM = PF04679)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23003_15-6608' '(at2g05210 : 198.0) Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; Protection of Telomeres 1a (AtPOT1a); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72969 : 112.0) no description available & (gnl|cdd|39954 : 109.0) no description available & (reliability: 396.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23603_9765-16971' '(at1g34380 : 329.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 149.0) no description available & (reliability: 658.0) & (original description: Putative KK1_009244, Description = 5'-3' exonuclease, PFAM = PF02739;PF01367)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23736_6204-10182' '(at5g65630 : 265.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 205.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 508.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold27151_3574-9344' '(at3g55060 : 490.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 980.0) & (original description: Putative BnaC06g15600D, Description = BnaC06g15600D protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold27521_17696-26621' '(at4g32700 : 507.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|31092 : 222.0) no description available & (reliability: 1014.0) & (original description: Putative TEB, Description = DNA polymerase theta, PFAM = PF00476)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold28236_15446-23847' '(at1g10520 : 454.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 209.0) no description available & (gnl|cdd|37745 : 175.0) no description available & (reliability: 908.0) & (original description: Putative polb, Description = DNA polymerase lambda, PFAM = PF00533;PF14792;PF14716;PF10391)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29326_11620-38959' '(at2g01130 : 1517.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 953.0) no description available & (gnl|cdd|31829 : 474.0) no description available & (reliability: 3034.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF07717;PF00035;PF00271;PF00270;PF04408)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29326_11862-23285' '(at2g01130 : 1185.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 855.0) no description available & (gnl|cdd|31829 : 457.0) no description available & (reliability: 2370.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00271;PF00270;PF04408;PF07717)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29609_711-18192' '(at1g67320 : 638.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 371.0) no description available & (gnl|cdd|86545 : 223.0) no description available & (reliability: 1276.0) & (original description: Putative prim2, Description = DNA primase large subunit, PFAM = PF04104)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29832_2708-24601' '(at2g13370 : 1927.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1089.0) no description available & (q7g8y3|isw2_orysa : 436.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 307.0) no description available & (reliability: 3854.0) & (original description: Putative chd1, Description = Chromodomain-helicase-DNA-binding protein 1, PFAM = PF00385;PF00176;PF00271;PF13907)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold30981_5220-8088' '(at5g01290 : 184.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 160.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold35076_8679-22022' '(at5g06310 : 238.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 135.0) no description available & (gnl|cdd|72969 : 106.0) no description available & (reliability: 430.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF16686;PF02765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold35732_2236-8387' '(at5g32440 : 204.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 408.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38137_523-8766' '(at5g32440 : 204.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 408.0) & (original description: Putative PGSC0003DMG400028628, Description = Ubiquitin system component Cue protein, putative, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38179_12903-18092' '(at5g08020 : 835.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 171.0) no description available & (reliability: 1670.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF16900;PF04057;PF01336;PF08646)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38771_1-18345' '(at5g63920 : 193.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 92.0) no description available & (reliability: 386.0) & (original description: Putative TOP3A, Description = DNA topoisomerase, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold39408_10859-17433' '(at5g17690 : 188.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 169.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 376.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold42425_13036-16889' '(at3g18950 : 497.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 139.0) no description available & (gnl|cdd|35495 : 84.7) no description available & (reliability: 994.0) & (original description: Putative wdrp, Description = F-box and wd40 domain protein, putative, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold43593_11987-17675' '(at4g26110 : 392.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein1;1 (NAP1;1); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair, nucleosome assembly; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 303.0) no description available & (gnl|cdd|85149 : 269.0) no description available & (reliability: 784.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold44037_1-8769' '(at1g18800 : 283.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 154.0) no description available & (gnl|cdd|85149 : 141.0) no description available & (reliability: 566.0) & (original description: Putative NRP2, Description = NAP1-related protein 2, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold46655_1-5695' '(at1g18800 : 222.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 148.0) no description available & (gnl|cdd|85149 : 142.0) no description available & (reliability: 444.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold50129_10123-15131' '(at5g23120 : 212.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 209.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 95.1) no description available & (reliability: 406.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold50680_3167-10814' '(at1g18800 : 275.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 179.0) no description available & (gnl|cdd|85149 : 140.0) no description available & (reliability: 550.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold51991_620-6164' '(at5g35910 : 361.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 226.0) no description available & (gnl|cdd|85567 : 89.9) no description available & (reliability: 722.0) & (original description: Putative EXOSX, Description = Exosome component 10, PFAM = PF01612;PF08066)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold55085_530-13363' '(at1g31360 : 402.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (gnl|cdd|35574 : 183.0) no description available & (gnl|cdd|30860 : 169.0) no description available & (reliability: 804.0) & (original description: Putative RECQ1, Description = RECQ1, PFAM = PF09382;PF00271;PF00570;PF16124)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold56763_8296-12888' '(at5g57160 : 189.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36184 : 164.0) no description available & (q7x7e9|dnl4_orysa : 143.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF04675)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold58100_35-8613' '(at3g23890 : 1571.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1523.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (gnl|cdd|35576 : 1047.0) no description available & (gnl|cdd|47740 : 636.0) no description available & (reliability: 3142.0) & (original description: Putative TOP2, Description = DNA topoisomerase 2, PFAM = PF16898;PF02518;PF01751;PF00204;PF00521)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold63421_295-6236' '(at1g05900 : 248.0) endonuclease III 2 (NTH2); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), Helix-hairpin-helix motif (InterPro:IPR000445), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT2G31450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37132 : 236.0) no description available & (gnl|cdd|30526 : 142.0) no description available & (reliability: 496.0) & (original description: Putative nth1, Description = Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF00730;PF00633)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold71266_8833-14221' '(at2g32010 : 811.0) Encodes an inositol polyphosphate 5Ã-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.; CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1). & (gnl|cdd|35786 : 233.0) no description available & (gnl|cdd|47467 : 199.0) no description available & (reliability: 1622.0) & (original description: Putative IP5P6, Description = Type IV inositol polyphosphate 5-phosphatase 6, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold74304_2797-8333' '(at5g32440 : 207.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 414.0) & (original description: Putative At5g32440, Description = Ubiquitin system component Cue protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold76139_1-6382' '(at3g13170 : 465.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 351.0) no description available & (gnl|cdd|31883 : 215.0) no description available & (reliability: 930.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold81472_1-6211' '(at1g70070 : 412.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 331.0) no description available & (gnl|cdd|34219 : 245.0) no description available & (reliability: 824.0) & (original description: Putative helY, Description = Superfamily II RNA helicase, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold89048_1139-8335' '(at3g06400 : 558.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 538.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 377.0) no description available & (gnl|cdd|84584 : 254.0) no description available & (reliability: 1058.0) & (original description: Putative isw, Description = ISWI chromatin-remodeling complex ATPase ISW2, PFAM = PF13892;PF00176)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold107736_1-3061' '(gnl|cdd|30860 : 184.0) no description available & (gnl|cdd|35572 : 164.0) no description available & (at5g27680 : 134.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5_439567-468689' '(at2g35920 : 1428.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (gnl|cdd|36138 : 997.0) no description available & (gnl|cdd|31829 : 513.0) no description available & (reliability: 2856.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF04408;PF00270;PF07717;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold8_1983916-1994901' '(at1g05630 : 1477.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34970 : 143.0) no description available & (gnl|cdd|35786 : 125.0) no description available & (reliability: 2942.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold68_868618-883764' '(at1g65810 : 301.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 159.0) no description available & (reliability: 602.0) & (original description: Putative PGSC0003DMG400037817, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold76_740730-757880' '(at5g63920 : 774.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 653.0) no description available & (gnl|cdd|30896 : 294.0) no description available & (reliability: 1548.0) & (original description: Putative top3, Description = DNA topoisomerase, PFAM = PF01751;PF01131)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold99_99440-121146' '(at2g42120 : 716.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 640.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 500.0) no description available & (gnl|cdd|67651 : 177.0) no description available & (reliability: 1432.0) & (original description: Putative POLD2, Description = DNA polymerase delta small subunit, PFAM = PF04042)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold103_177605-193606' '(at5g44750 : 965.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48487 : 528.0) no description available & (gnl|cdd|37304 : 479.0) no description available & (reliability: 1930.0) & (original description: Putative REV1, Description = DNA repair protein REV1, PFAM = PF11799;PF00817;PF16589)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold111_1146819-1153584' '(at4g00660 : 734.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 702.0) no description available & (gnl|cdd|30859 : 355.0) no description available & (p35683|if4a_orysa : 279.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1468.0) & (original description: Putative ddx6, Description = Probable ATP-dependent RNA helicase ddx6, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold112_156372-170369' '(at5g35910 : 703.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 399.0) no description available & (gnl|cdd|85567 : 136.0) no description available & (reliability: 1406.0) & (original description: Putative RRP6L2, Description = Protein RRP6-like 2, PFAM = PF08066;PF01612;PF00570)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold373_537815-548885' '(at5g06310 : 315.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 174.0) no description available & (gnl|cdd|72969 : 114.0) no description available & (reliability: 600.0) & (original description: Putative POT1B, Description = Protection of telomeres protein 1b, PFAM = PF02765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold446_130975-137737' '(at3g47490 : 229.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease domain-containing protein (TAIR:AT1G18680.1). & (reliability: 458.0) & (original description: Putative At3g47490, Description = HNH endonuclease, PFAM = PF01844)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold561_492265-497859' '(at2g19480 : 345.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 281.0) no description available & (gnl|cdd|85149 : 251.0) no description available & (reliability: 690.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold567_182527-199933' '(at5g44800 : 1313.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (gnl|cdd|35605 : 604.0) no description available & (q7g8y3|isw2_orysa : 346.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 306.0) no description available & (reliability: 2626.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00176;PF06465;PF00628;PF00271;PF00385;PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold584_211646-238605' '(at5g04130 : 649.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 615.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 606.0) no description available & (gnl|cdd|35576 : 360.0) no description available & (reliability: 1298.0) & (original description: Putative gyrB, Description = DNA gyrase subunit B, PFAM = PF00204;PF02518)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold584_614123-642714' '(at2g13840 : 481.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|30958 : 147.0) no description available & (reliability: 962.0) & (original description: Putative BnaA03g38520D, Description = BnaA03g38520D protein, PFAM = PF02811)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold646_24224-72235' '(q9lre6|dpod1_orysa : 998.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 965.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 944.0) no description available & (gnl|cdd|84550 : 448.0) no description available & (reliability: 1930.0) & (original description: Putative DPD1, Description = DNA polymerase, PFAM = PF14260;PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold922_452957-464262' '(at5g58720 : 303.0) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative Zm.2642, Description = , PFAM = PF08590;PF01713)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold963_522988-525854' '(at1g51080 : 165.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold970_64194-66328' '(at1g20960 : 357.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 309.0) no description available & (gnl|cdd|31397 : 147.0) no description available & (reliability: 714.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1155_192273-204632' '(at1g21690 : 564.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (gnl|cdd|36207 : 369.0) no description available & (gnl|cdd|80670 : 314.0) no description available & (reliability: 1128.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1190_357577-375797' '(at5g22010 : 863.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37179 : 263.0) no description available & (gnl|cdd|81320 : 199.0) no description available & (reliability: 1726.0) & (original description: Putative RFC1, Description = Replication factor C subunit 1, PFAM = PF08519;PF00004;PF00533)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1399_28260-36852' '(at5g26680 : 610.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 590.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 442.0) no description available & (gnl|cdd|29030 : 397.0) no description available & (reliability: 1220.0) & (original description: Putative FEN1, Description = Flap endonuclease 1, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1448_200636-223437' '(at2g13370 : 1949.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1105.0) no description available & (q7g8y3|isw2_orysa : 431.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 308.0) no description available & (reliability: 3898.0) & (original description: Putative CHR5, Description = Protein CHROMATIN REMODELING 5, PFAM = PF13907;PF00385;PF00271;PF00176)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1884_160517-172406' '(at4g00660 : 622.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 598.0) no description available & (gnl|cdd|30859 : 291.0) no description available & (p41378|if4a_wheat : 209.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1244.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2304_21668-34257' '(at3g06400 : 1640.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1592.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1088.0) no description available & (gnl|cdd|84584 : 338.0) no description available & (reliability: 3200.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF09111;PF09110;PF00176;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2477_39117-55925' '(at5g16270 : 329.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 207.0) no description available & (gnl|cdd|68400 : 153.0) no description available & (reliability: 658.0) & (original description: Putative rec8, Description = Double-strand-break repair protein rad21-like protein, PFAM = PF04825;PF04824)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2591_201547-207235' '(at4g26110 : 387.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein1;1 (NAP1;1); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair, nucleosome assembly; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 318.0) no description available & (gnl|cdd|85149 : 277.0) no description available & (reliability: 774.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2970_181643-195634' '(at1g65810 : 660.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 418.0) no description available & (gnl|cdd|31309 : 164.0) no description available & (reliability: 1320.0) & (original description: Putative At5g37140, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF00580;PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 520.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3349_295269-362836' '(at1g18800 : 257.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 170.0) no description available & (gnl|cdd|85149 : 132.0) no description available & (reliability: 514.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3370_16264-23470' '(at1g34380 : 402.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 159.0) no description available & (reliability: 804.0) & (original description: Putative BnaC06g08260D, Description = BnaC06g08260D protein, PFAM = PF02739;PF01367)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3379_156029-174831' '(at4g36050 : 578.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|31052 : 170.0) no description available & (gnl|cdd|36508 : 92.0) no description available & (reliability: 1156.0) & (original description: Putative APE2, Description = DNA-(apurinic or apyrimidinic site) lyase 2, PFAM = PF06839;PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3398_1-7402' '(at2g26280 : 466.0) smr (Small MutS Related) domain-containing protein mRNA, complete cds; CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative glysoja_039984, Description = NEDD4-binding protein 2, PFAM = PF08590)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3474_112738-137898' '(at1g08840 : 1212.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 784.0) no description available & (gnl|cdd|72120 : 196.0) no description available & (reliability: 2424.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF13087;PF08696;PF13086;PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3598_58860-236510' '(gnl|cdd|30860 : 343.0) no description available & (gnl|cdd|35572 : 261.0) no description available & (at1g60930 : 201.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF16124;PF00271;PF09382;PF14493;PF00570)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4020_18344-60705' '(at1g58060 : 1402.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 784.0) no description available & (gnl|cdd|31829 : 270.0) no description available & (reliability: 2804.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX57, PFAM = PF00270;PF04408;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4086_63465-72407' '(at5g37030 : 511.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Helicase domain, viral-like (InterPro:IPR000606); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G37150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37012 : 319.0) no description available & (gnl|cdd|31309 : 151.0) no description available & (reliability: 1022.0) & (original description: Putative At5g37030, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13086;PF13087)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4128_101597-116439' '(at2g42120 : 711.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 636.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 482.0) no description available & (gnl|cdd|67651 : 175.0) no description available & (reliability: 1422.0) & (original description: Putative cdc1, Description = DNA polymerase delta subunit 2, PFAM = PF04042)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4381_79176-99612' '(at3g10690 : 1219.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (q7xzf7|gyra_orysa : 1171.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81634 : 1016.0) no description available & (gnl|cdd|35576 : 436.0) no description available & (reliability: 2438.0) & (original description: Putative GYRA, Description = DNA gyrase subunit A, chloroplastic/mitochondrial, PFAM = PF03989;PF03989;PF03989;PF03989;PF03989;PF03989;PF00521)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_92618-126877' '(at2g28290 : 1134.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 846.0) no description available & (q7g8y3|isw2_orysa : 348.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 340.0) no description available & (reliability: 2268.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619;PF00176;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_97129-100828' '(at2g28290 : 114.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_97724-114702' '(at2g28290 : 117.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4842_158819-172127' '(at1g65580 : 1357.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 236.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 2714.0) & (original description: Putative IP5P15, Description = Type II inositol polyphosphate 5-phosphatase 15, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 598.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5372_10266-71156' '(at1g35530 : 878.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|31308 : 431.0) no description available & (gnl|cdd|35575 : 430.0) no description available & (reliability: 1756.0) & (original description: Putative mph1, Description = ATP-dependent DNA helicase MPH1, PFAM = PF00271;PF04851)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5372_10384-58702' '(at1g35530 : 817.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|35575 : 433.0) no description available & (gnl|cdd|31308 : 432.0) no description available & (reliability: 1634.0) & (original description: Putative v1g133840, Description = Predicted protein, PFAM = PF04851;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5433_127537-132343' '(at5g23520 : 188.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400023332, Description = Smr (Small MutS Related) domain-containing protein, putative isoform 1, PFAM = PF08590;PF01713)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 612.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6231_1173-6114' '(at1g26840 : 350.0) Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.; origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39757 : 236.0) no description available & (gnl|cdd|69009 : 210.0) no description available & (reliability: 700.0) & (original description: Putative ORC6, Description = Origin of replication complex subunit 6, PFAM = PF05460)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6337_6837-15893' '(at1g18800 : 284.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 152.0) no description available & (gnl|cdd|85149 : 133.0) no description available & (reliability: 568.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6809_1606-7425' '(at5g32440 : 196.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 392.0) & (original description: Putative BnaC03g59170D, Description = BnaC03g59170D protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6885_1-32162' '(at1g66730 : 1577.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 807.0) no description available & (gnl|cdd|80824 : 419.0) no description available & (reliability: 3154.0) & (original description: Putative LIG6, Description = DNA ligase 6, PFAM = PF04675;PF04679;PF07522;PF01068)' T
'28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044ctg26121602_1610-3904' '(at1g51080 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000427ctg010_1-13492' '(at3g04260 : 627.0) plastid transcriptionally active 3 (PTAC3); FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: plastid chromosome, nucleus, chloroplast, nucleoid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 11987 Blast hits to 8407 proteins in 477 species: Archae - 24; Bacteria - 285; Metazoa - 3588; Fungi - 1065; Plants - 3982; Viruses - 208; Other Eukaryotes - 2835 (source: NCBI BLink). & (reliability: 1254.0) & (original description: Putative oxer4, Description = DNA-binding proteinPTAC3, PFAM = PF02037)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000806ctg000_1-13698' '(at3g10690 : 659.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (gnl|cdd|81634 : 653.0) no description available & (q7xzf7|gyra_orysa : 639.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|35576 : 264.0) no description available & (reliability: 1318.0) & (original description: Putative gyrA, Description = DNA gyrase subunit A, PFAM = PF00521)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000939ctg006_7408-12144' '(at2g19480 : 314.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 242.0) no description available & (gnl|cdd|85149 : 226.0) no description available & (reliability: 628.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00001099ctg005_235-9667' '(at5g11170 : 789.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 612.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (p35683|if4a_orysa : 243.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1578.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00001414ctg006_2380-6162' '(at4g00660 : 370.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 349.0) no description available & (gnl|cdd|30859 : 172.0) no description available & (p41381|if4a8_tobac : 124.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (reliability: 740.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00002213ctg012_1-10490' '(at4g14700 : 958.0) Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator.; origin recognition complex 1 (ORC1A); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin of replication complex 1B (TAIR:AT4G12620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36727 : 615.0) no description available & (gnl|cdd|72858 : 235.0) no description available & (reliability: 1894.0) & (original description: Putative ORC1, Description = Origin of replication complex subunit 1, PFAM = PF01426;PF00004;PF00628)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00002645ctg010_1-2441' '(at5g17780 : 194.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 104.0) no description available & (reliability: 374.0) & (original description: Putative BDG1, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003065ctg001_8188-22959' '(o48653|dpola_orysa : 1808.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 1736.0) Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36188 : 1272.0) no description available & (gnl|cdd|84550 : 377.0) no description available & (reliability: 3472.0) & (original description: Putative Os01g0868300, Description = DNA polymerase alpha catalytic subunit, PFAM = PF03104;PF00136;PF08996;PF12254)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003137ctg015_1-4598' '(at5g56780 : 268.0) effector of transcription2 (ET2); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26170.1); Has 86 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative ET3, Description = AtET3, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003466ctg011_1-3358' '(at1g73875 : 206.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative At1g73875, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003868ctg027_893-10189' '(at5g40840 : 138.0) Cohesion family protein SYN2 (SYN2).; SYN2; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909); BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4 (TAIR:AT5G16270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 106.0) no description available & (reliability: 276.0) & (original description: Putative PGSC0003DMG401020221, Description = , PFAM = PF04825;PF04824)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00004794ctg000_7498-18246' '(at5g04895 : 359.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|36138 : 209.0) no description available & (gnl|cdd|86655 : 100.0) no description available & (reliability: 718.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF04408)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00004794ctg004_1-2310' '(at5g04895 : 233.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005024ctg004_1-4482' '(at3g53320 : 85.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005295ctg000_28427-35532' '(at1g01370 : 122.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 116.0) no description available & (gnl|cdd|47735 : 113.0) no description available & (q5dwi3|h3_marpo : 87.0) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 244.0) & (original description: Putative HTR12, Description = Histone H3-like centromeric protein HTR12, PFAM = PF00125)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005785ctg006_3734-8144' '(at5g63920 : 234.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 178.0) no description available & (gnl|cdd|73184 : 119.0) no description available & (reliability: 468.0) & (original description: Putative top3a, Description = DNA topoisomerase, PFAM = PF01131)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00006897ctg002_13277-19205' '(at5g04110 : 160.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative GYRB3, Description = Putative ovule protein, PFAM = PF01448)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007678ctg000_4953-10715' '(at2g26280 : 608.0) smr (Small MutS Related) domain-containing protein mRNA, complete cds; CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative Sb01g045220, Description = Putative uncharacterized protein Sb01g045220, PFAM = PF01713;PF08590)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007888ctg001_7757-19029' '(at2g30800 : 1340.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 469.0) no description available & (gnl|cdd|31829 : 261.0) no description available & (reliability: 2680.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF01424;PF07717;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007952ctg005_1-1988' '(at5g57160 : 166.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 108.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 104.0) no description available & (reliability: 332.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007992ctg002_3260-6804' '(at5g17690 : 145.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 110.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 290.0) & (original description: Putative lhp1, Description = Putative chromo domain protein LHP1-like, PFAM = PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00008501ctg006_1-3343' '(at5g56950 : 233.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 232.0) no description available & (gnl|cdd|85149 : 204.0) no description available & (reliability: 466.0) & (original description: Putative 1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00009996ctg030_5190-14914' '(at2g31450 : 369.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 347.0) no description available & (gnl|cdd|30526 : 207.0) no description available & (reliability: 738.0) & (original description: Putative NTH1, Description = Endonuclease III homolog 1, chloroplastic, PFAM = PF00633;PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010363ctg001_26162-29226' '(at1g58060 : 199.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 120.0) no description available & (reliability: 398.0) & (original description: Putative RG11, Description = ATP-dependent RNA helicase DHX29, PFAM = PF04408)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010381ctg000_1-2370' '(at3g22470 : 159.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF12854;PF13041;PF13041)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010727ctg000_1-6200' '(at3g53110 : 298.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 240.0) no description available & (gnl|cdd|28928 : 153.0) no description available & (p41378|if4a_wheat : 89.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 596.0) & (original description: Putative helC, Description = LOS4, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011038ctg011_595-8822' '(at3g54350 : 166.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 164.0) no description available & (reliability: 332.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF13325;PF00498)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011038ctg011_687-9256' '(at3g54350 : 152.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 120.0) no description available & (reliability: 304.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF13325)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011859ctg010_1-1362' '(at5g09600 : 86.7) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 173.4) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_1747-24721' '(at2g28290 : 1140.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 847.0) no description available & (q7g8y3|isw2_orysa : 346.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 337.0) no description available & (reliability: 2280.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00271;PF00176;PF14619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_2658-19504' '(at2g28290 : 117.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_16245-20099' '(at2g28290 : 114.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHR3, Description = ATP-dependent helicase SYD, PFAM = PF14619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012862ctg006_30204-34902' '(q9lre6|dpod1_orysa : 369.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 351.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 276.0) no description available & (reliability: 702.0) & (original description: Putative cdc6, Description = DNA polymerase, PFAM = PF14260;PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00013879ctg000_1927-10182' '(at4g24790 : 551.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 296.0) no description available & (gnl|cdd|32641 : 259.0) no description available & (reliability: 1102.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015420ctg009_8852-14871' '(at2g42320 : 542.0) nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1084.0) & (original description: Putative A20, Description = Putative uncharacterized protein A20, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015587ctg003_1-6812' '(at4g15850 : 500.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 312.0) no description available & (gnl|cdd|30859 : 147.0) no description available & (reliability: 1000.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015587ctg004_1-2173' '(at4g15850 : 120.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 93.9) no description available & (reliability: 240.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015650ctg010_8255-12039' '(at3g22470 : 421.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 323.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 820.0) & (original description: Putative , Description = ATP binding,nucleic acid binding,helicases, putative, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015665ctg002_16726-23920' '(at3g53440 : 136.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); Has 4379 Blast hits to 2740 proteins in 256 species: Archae - 0; Bacteria - 81; Metazoa - 1861; Fungi - 384; Plants - 214; Viruses - 25; Other Eukaryotes - 1814 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400000839, Description = Homeodomain-like superfamily protein, putative, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00016565ctg011_1-1972' '(at5g44800 : 87.4) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative Os02g0817000, Description = Os02g0817000 protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018030ctg004_4170-14647' '(at5g55300 : 778.0) Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Functions in stem cell maintenance at all stages of shoot and floral meristems and in the regulation of gene silencing.; DNA topoisomerase I alpha (TOP1ALPHA); FUNCTIONS IN: protein binding, DNA topoisomerase type I activity; INVOLVED IN: in 8 processes; LOCATED IN: chromosome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499); BEST Arabidopsis thaliana protein match is: DNA topoisomerase 1 beta (TAIR:AT5G55310.1). & (gnl|cdd|36199 : 772.0) no description available & (p93119|top1_dauca : 709.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (gnl|cdd|47742 : 499.0) no description available & (reliability: 1556.0) & (original description: Putative TOP1, Description = DNA topoisomerase 1, PFAM = PF14370;PF02919;PF01028)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018262ctg003_1-3123' '(at4g32700 : 343.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|82231 : 133.0) no description available & (reliability: 686.0) & (original description: Putative TEB, Description = DNA polymerase theta, PFAM = PF00476)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018262ctg005_4203-24062' '(at4g32700 : 1257.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 711.0) no description available & (gnl|cdd|31397 : 299.0) no description available & (reliability: 2514.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018449ctg003_2784-8173' '(at3g55490 : 199.0) GINS complex protein; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf3 (InterPro:IPR010492), GINS complex (InterPro:IPR021151); BEST Arabidopsis thaliana protein match is: GINS complex protein (TAIR:AT1G19080.2); Has 336 Blast hits to 336 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 114; Plants - 49; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36322 : 133.0) no description available & (gnl|cdd|87078 : 131.0) no description available & (reliability: 398.0) & (original description: Putative TTN10, Description = At1g19080, PFAM = PF05916)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00020680ctg000_13593-23408' '(at3g53110 : 578.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 462.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p41380|if4a3_nicpl : 210.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1156.0) & (original description: Putative RH38, Description = DEAD-box ATP-dependent RNA helicase 38, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00020982ctg005_1-5525' '(at5g56950 : 378.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 280.0) no description available & (gnl|cdd|85149 : 247.0) no description available & (reliability: 756.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00021872ctg006_9103-14657' '(at5g58720 : 90.9) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00022637ctg006_11045-15294' '(at3g06980 : 155.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 98.9) no description available & (gnl|cdd|28928 : 89.8) no description available & (reliability: 310.0) & (original description: Putative HEL, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00023067ctg000_1-9476' '(at1g05630 : 1413.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 127.0) no description available & (gnl|cdd|47467 : 126.0) no description available & (reliability: 2770.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024580ctg000_623-7173' '(at1g63160 : 605.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (gnl|cdd|36209 : 558.0) no description available & (gnl|cdd|80670 : 338.0) no description available & (reliability: 1210.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024841ctg002_8872-17395' '(at2g37440 : 526.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 193.0) no description available & (reliability: 1052.0) & (original description: Putative IP5P8, Description = Type I inositol polyphosphate 5-phosphatase 8, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024853ctg005_1-4100' '(at4g25120 : 266.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3Ã- to 5Ã-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (gnl|cdd|30559 : 101.0) no description available & (gnl|cdd|37319 : 98.9) no description available & (reliability: 532.0) & (original description: Putative SRS2, Description = ATP-dependent DNA helicase pcrA, PFAM = PF13361)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00025188ctg009_18191-26249' '(at2g03390 : 352.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 95.7) no description available & (reliability: 704.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF08755;PF02151)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00025913ctg011_2037-6105' '(at5g65630 : 284.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 526.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00026031ctg000_1-7636' '(at1g14900 : 80.9) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028097ctg002_1592-7312' '(at1g65780 : 382.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 238.0) no description available & (gnl|cdd|31309 : 88.1) no description available & (reliability: 764.0) & (original description: Putative At5g37030, Description = TPR and ankyrin repeat-containing protein 1, PFAM = PF13087;PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028186ctg003_5204-17558' '(at4g15570 : 288.0) Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.; MAGATAMA 3 (MAA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen-pistil interaction, pollen tube guidance, embryo sac development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G16800.1); Has 6636 Blast hits to 6003 proteins in 1303 species: Archae - 237; Bacteria - 1922; Metazoa - 1300; Fungi - 1113; Plants - 639; Viruses - 442; Other Eukaryotes - 983 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative MAA3, Description = Putative helicase DDB-G0274399, PFAM = PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028700ctg010_1-3730' '(at1g80040 : 135.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). & (reliability: 262.0) & (original description: Putative BnaA07g07960D, Description = BnaA07g07960D protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00029460ctg008_179-6197' '(at1g65580 : 745.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 204.0) no description available & (gnl|cdd|47467 : 196.0) no description available & (reliability: 1490.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030042ctg015_21023-26182' '(at2g48030 : 462.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 924.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030192ctg008_1980-6229' '(at5g16690 : 194.0) Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 3 (ORC3); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 3, N-terminal (InterPro:IPR010748), Origin recognition complex, subunit 3 (InterPro:IPR020795); Has 319 Blast hits to 284 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 89; Plants - 45; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ORC3, Description = Origin recognition complex subunit 3, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030273ctg001_1992-6175' '(at3g21530 : 469.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00031300ctg000_1-5373' '(at1g67320 : 419.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 258.0) no description available & (gnl|cdd|86545 : 179.0) no description available & (reliability: 838.0) & (original description: Putative pri2, Description = DNA primase large subunit, PFAM = PF04104)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00032010ctg006_1662-5216' '(at1g74350 : 759.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|73157 : 130.0) no description available & (p38478|ymf40_marpo : 80.1) Hypothetical 57.7 kDa protein in 18S rRNA intron 1 (ORF 502) - Marchantia polymorpha (Liverwort) & (reliability: 1518.0) & (original description: Putative Os06g0634100, Description = Os06g0634100 protein, PFAM = PF00078;PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00032025ctg010_9842-15067' '(at5g49010 : 211.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 134.0) no description available & (gnl|cdd|38386 : 123.0) no description available & (reliability: 422.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00033454ctg004_2558-11821' '(at1g27850 : 410.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative PGSC0003DMG400017461, Description = AT3g09000/T16O11_4, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00035094ctg001_7809-10622' '(gnl|cdd|37652 : 383.0) no description available & (at1g77180 : 377.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|66416 : 232.0) no description available & (reliability: 754.0) & (original description: Putative snw1, Description = Snw1 protein, PFAM = PF02731)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00036265ctg000_3086-7979' '(at1g11800 : 416.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 254.0) no description available & (reliability: 832.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00036674ctg007_29504-39951' '(at1g20960 : 3085.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 2157.0) no description available & (gnl|cdd|31397 : 523.0) no description available & (reliability: 6170.0) & (original description: Putative BRR2A, Description = DExH-box ATP-dependent RNA helicase DExH12, PFAM = PF00270;PF00270;PF02889;PF02889)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00037381ctg000_1-17097' '(at4g32700 : 1649.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 712.0) no description available & (gnl|cdd|31397 : 301.0) no description available & (reliability: 3298.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00041069ctg015_1-7077' '(at5g46280 : 968.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35700 : 938.0) no description available & (q43704|mcm3_maize : 824.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (gnl|cdd|47677 : 583.0) no description available & (reliability: 1936.0) & (original description: Putative ROA1, Description = DNA replication licensing factor MCM3 homolog 1, PFAM = PF14551;PF17207;PF00493)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00041244ctg005_146-3526' '(at4g30100 : 250.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative At2g19120, Description = Putative helicase MAGATAMA 3, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00043987ctg002_2963-10476' '(at2g47330 : 965.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (gnl|cdd|35560 : 810.0) no description available & (gnl|cdd|30859 : 385.0) no description available & (p46942|db10_nicsy : 328.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1930.0) & (original description: Putative RH24, Description = DEAD-box ATP-dependent RNA helicase 24, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00046334ctg001_1573-8764' '(at3g13170 : 472.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 357.0) no description available & (gnl|cdd|31883 : 220.0) no description available & (reliability: 944.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1006.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00048279ctg004_1-4187' '(at5g44750 : 103.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = DNA repair protein REV1, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00050980ctg000_1-5359' '(at4g12740 : 466.0) HhH-GPD base excision DNA repair family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), DNA glycosylase (InterPro:IPR011257), NUDIX hydrolase domain (InterPro:IPR000086), HhH-GPD domain (InterPro:IPR003265); Has 55833 Blast hits to 29061 proteins in 2861 species: Archae - 372; Bacteria - 10631; Metazoa - 17750; Fungi - 4523; Plants - 1695; Viruses - 834; Other Eukaryotes - 20028 (source: NCBI BLink). & (gnl|cdd|37668 : 369.0) no description available & (gnl|cdd|31387 : 314.0) no description available & (reliability: 932.0) & (original description: Putative Mutyh, Description = Adenine DNA glycosylase, PFAM = PF14815;PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00052854ctg001_1-3888' '(at1g07540 : 152.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative TBP1, Description = Putative telomere repeat-binding protein 5-like, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00053274ctg003_138-2894' '(at1g70070 : 189.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 101.0) no description available & (reliability: 378.0) & (original description: Putative ISE2, Description = DEAD-box ATP-dependent RNA helicase ISE2, PFAM = PF08148)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00053439ctg000_1-1255' '(at3g18600 : 149.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 140.0) no description available & (gnl|cdd|28928 : 110.0) no description available & (reliability: 298.0) & (original description: Putative has1, Description = ATP-dependent RNA helicase HAS1, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00057225ctg000_450-9117' '(at2g23840 : 318.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes - 2425 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative mcrA, Description = HNH endonuclease family protein, PFAM = PF14279)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101ctg15694_297-3157' '(at1g51080 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00039_92538-108403' '(at4g30870 : 640.0) Encodes an Arabidopsis homolog of the endonuclease MSU81. T-DNA insertion lines of AtMSU81 have a deficiency in homologous recombination in somatic cells but only after genotoxic stress. Crosses with a hyperrecombinogenic mutant of the AtRecQ4A helicase resulted in synthetic lethality in the double mutant.; MMS AND UV SENSITIVE 81 (MUS81); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT5G39770.1); Has 631 Blast hits to 481 proteins in 192 species: Archae - 11; Bacteria - 4; Metazoa - 158; Fungi - 249; Plants - 48; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|37590 : 227.0) no description available & (reliability: 1280.0) & (original description: Putative MUS81, Description = Crossover junction endonuclease MUS81, PFAM = PF02732)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00058_217830-221587' '(at3g21530 : 468.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00069_30754-62251' '(at2g47680 : 1100.0) zinc finger (CCCH type) helicase family protein; FUNCTIONS IN: helicase activity, zinc ion binding, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 9601 Blast hits to 8936 proteins in 1526 species: Archae - 0; Bacteria - 3317; Metazoa - 2456; Fungi - 1337; Plants - 806; Viruses - 205; Other Eukaryotes - 1480 (source: NCBI BLink). & (gnl|cdd|36138 : 446.0) no description available & (gnl|cdd|31829 : 272.0) no description available & (reliability: 2200.0) & (original description: Putative At2g47680, Description = DExH-box ATP-dependent RNA helicase DExH8, PFAM = PF00271;PF00270;PF00642)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00073_8694-17818' '(at4g18820 : 900.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G45720.1); Has 12659 Blast hits to 12635 proteins in 2803 species: Archae - 377; Bacteria - 7447; Metazoa - 406; Fungi - 391; Plants - 312; Viruses - 22; Other Eukaryotes - 3704 (source: NCBI BLink). & (gnl|cdd|36207 : 372.0) no description available & (gnl|cdd|32641 : 238.0) no description available & (reliability: 1800.0) & (original description: Putative At4g18820, Description = Protein STICHEL-like 3, PFAM = PF13177;PF12169)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00109_556341-567213' '(gnl|cdd|36427 : 150.0) no description available & (at5g40840 : 139.0) Cohesion family protein SYN2 (SYN2).; SYN2; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909); BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4 (TAIR:AT5G16270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68400 : 112.0) no description available & (reliability: 278.0) & (original description: Putative rad21, Description = UPF0183 protein C16orf70-like protein, PFAM = PF04825;PF04824)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00110_230182-237507' '(at3g53440 : 139.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); Has 4379 Blast hits to 2740 proteins in 256 species: Archae - 0; Bacteria - 81; Metazoa - 1861; Fungi - 384; Plants - 214; Viruses - 25; Other Eukaryotes - 1814 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400000839, Description = At3g53440, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00128_120045-124530' '(at2g37440 : 323.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 252.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 646.0) & (original description: Putative At2g37440, Description = DNAse I-like superfamily protein, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00144_252452-257483' '(at1g74350 : 915.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|73157 : 131.0) no description available & (p38478|ymf40_marpo : 80.9) Hypothetical 57.7 kDa protein in 18S rRNA intron 1 (ORF 502) - Marchantia polymorpha (Liverwort) & (reliability: 1830.0) & (original description: Putative Os06g0634100, Description = Os06g0634100 protein, PFAM = PF01348;PF00078)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00180_541-5401' '(at1g11190 : 457.0) Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).; bifunctional nuclease i (BFN1); FUNCTIONS IN: T/G mismatch-specific endonuclease activity, endoribonuclease activity, producing 5'-phosphomonoesters, single-stranded DNA specific endodeoxyribonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 701 Blast hits to 698 proteins in 200 species: Archae - 0; Bacteria - 187; Metazoa - 0; Fungi - 98; Plants - 121; Viruses - 4; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|85937 : 407.0) no description available & (reliability: 914.0) & (original description: Putative tbn1, Description = Putative endonuclease, PFAM = PF02265)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00189_692234-703212' '(at4g01020 : 1847.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|36140 : 624.0) no description available & (gnl|cdd|31829 : 477.0) no description available & (reliability: 3694.0) & (original description: Putative At4g01020, Description = ATP-dependent RNA helicase DEAH11, chloroplastic, PFAM = PF00271;PF01485;PF04408;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00215_663804-671947' '(at5g17690 : 187.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 155.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 374.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00218_104091-108256' '(at5g46920 : 1110.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73157 : 153.0) no description available & (gnl|cdd|39965 : 102.0) no description available & (p38456|ymf11_marpo : 97.1) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (reliability: 2220.0) & (original description: Putative At5g46920, Description = Intron maturase, type II family protein, PFAM = PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00338_169753-229092' '(at5g63920 : 527.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 229.0) no description available & (gnl|cdd|73184 : 121.0) no description available & (reliability: 1054.0) & (original description: Putative TOP3A, Description = DNA topoisomerase, PFAM = PF01396;PF01131;PF00098;PF00098;PF06839)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00351_574649-578635' '(at5g65630 : 281.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 201.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 538.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00366_151923-169742' '(at1g67320 : 653.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 380.0) no description available & (gnl|cdd|86545 : 229.0) no description available & (reliability: 1306.0) & (original description: Putative prim2, Description = DNA primase large subunit, PFAM = PF04104)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00369_337479-355768' '(at5g27680 : 412.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35572 : 257.0) no description available & (gnl|cdd|30860 : 212.0) no description available & (reliability: 824.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270;PF00271;PF16124)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00457_741114-743866' '(gnl|cdd|36687 : 119.0) no description available & (at1g06230 : 108.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|47625 : 90.7) no description available & (reliability: 212.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF00439)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00496_19789-23048' '(at5g02820 : 664.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|38006 : 420.0) no description available & (gnl|cdd|81366 : 280.0) no description available & (reliability: 1328.0) & (original description: Putative TOP6A, Description = DNA topoisomerase 6 subunit A, PFAM = PF04406)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00542_125056-137636' '(at5g37630 : 959.0) EMBRYO DEFECTIVE 2656 (EMB2656); FUNCTIONS IN: binding; INVOLVED IN: mitotic chromosome condensation, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 333 Blast hits to 316 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 113; Fungi - 138; Plants - 47; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37236 : 149.0) no description available & (gnl|cdd|34815 : 113.0) no description available & (reliability: 1918.0) & (original description: Putative EMB2656, Description = Embryo defective protein 2656, PFAM = PF12719)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00567_379369-384828' '(at5g45400 : 733.0) RPA70C; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33; Bacteria - 8; Metazoa - 314; Fungi - 240; Plants - 399; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|72071 : 219.0) no description available & (reliability: 1466.0) & (original description: Putative RPA1C, Description = Replication protein A 70 kDa DNA-binding subunit C, PFAM = PF00098;PF00098;PF00098;PF16900;PF01336;PF04057;PF08646)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00573_4729-14513' '(at1g20960 : 1114.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 1014.0) no description available & (gnl|cdd|31397 : 482.0) no description available & (reliability: 2228.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF02889;PF02889;PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00621_423462-427291' '(at3g21530 : 468.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00635_24594-31223' '(at2g03390 : 398.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 114.0) no description available & (reliability: 796.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF08755;PF02151)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00646_568797-590146' '(at4g15570 : 963.0) Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.; MAGATAMA 3 (MAA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen-pistil interaction, pollen tube guidance, embryo sac development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G16800.1); Has 6636 Blast hits to 6003 proteins in 1303 species: Archae - 237; Bacteria - 1922; Metazoa - 1300; Fungi - 1113; Plants - 639; Viruses - 442; Other Eukaryotes - 983 (source: NCBI BLink). & (gnl|cdd|37012 : 318.0) no description available & (gnl|cdd|31309 : 184.0) no description available & (reliability: 1926.0) & (original description: Putative MAA3, Description = Probable helicase MAGATAMA 3, PFAM = PF13086;PF13086;PF13087)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00653_44242-59531' '(at5g23520 : 226.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PGSC0003DMG400023332, Description = Putative uncharacterized protein Sb06g017530, PFAM = PF01713;PF08590)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00661_99060-107430' '(at1g10520 : 701.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 288.0) no description available & (gnl|cdd|37745 : 237.0) no description available & (reliability: 1402.0) & (original description: Putative poll, Description = DNA pol lambda, PFAM = PF10391;PF14716;PF00533;PF14792;PF14791)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00672_442202-473562' '(at2g28290 : 1169.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 850.0) no description available & (q7g8y3|isw2_orysa : 350.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 337.0) no description available & (reliability: 2338.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00176;PF14619;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00690_566438-572249' '(at2g42320 : 493.0) nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative A20, Description = Putative uncharacterized protein A20, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00751_148666-157864' '(at3g50360 : 205.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (gnl|cdd|35251 : 163.0) no description available & (p05434|catr_chlre : 158.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 115.0) no description available & (reliability: 410.0) & (original description: Putative CTN, Description = Caltractin, PFAM = PF13499;PF13405)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00752_70654-72956' '(at5g09600 : 87.0) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 174.0) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00788_39287-58045' '(at4g31570 : 1028.0) CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink). & (gnl|cdd|35383 : 101.0) no description available & (reliability: 2056.0) & (original description: Putative BnaA01g34800D, Description = BnaA01g34800D protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00797_1903019-1925649' '(at2g13370 : 1969.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1110.0) no description available & (q7g8y3|isw2_orysa : 435.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 308.0) no description available & (reliability: 3938.0) & (original description: Putative CHR5, Description = Protein CHROMATIN REMODELING 5, PFAM = PF00271;PF00385;PF00176;PF13907)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00821_1093744-1151573' '(at3g47490 : 231.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease domain-containing protein (TAIR:AT1G18680.1). & (reliability: 462.0) & (original description: Putative At3g47490, Description = HNH endonuclease, PFAM = PF01844)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00842_3151-5561' '(at5g60230 : 152.0) putative subunit of tRNA splicing endonuclease; splicing endonuclease 2 (SEN2); CONTAINS InterPro DOMAIN/s: tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), tRNA-intron endonuclease (InterPro:IPR006676), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 1 (TAIR:AT3G45590.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 110.0) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (gnl|cdd|39883 : 108.0) no description available & (reliability: 304.0) & (original description: Putative SEN1, Description = tRNA-splicing endonuclease subunit Sen2-2, PFAM = PF01974;PF02778)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00869_740149-748799' '(at3g23890 : 1566.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1509.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (gnl|cdd|35576 : 1054.0) no description available & (gnl|cdd|47740 : 633.0) no description available & (reliability: 3132.0) & (original description: Putative TOP2, Description = DNA topoisomerase 2, PFAM = PF16898;PF00521;PF01751;PF02518;PF00204)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00873_108687-118317' '(at1g03750 : 1152.0) switch 2 (SWI2); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1); Has 20033 Blast hits to 14398 proteins in 1655 species: Archae - 120; Bacteria - 5954; Metazoa - 4199; Fungi - 4321; Plants - 1927; Viruses - 177; Other Eukaryotes - 3335 (source: NCBI BLink). & (gnl|cdd|35608 : 649.0) no description available & (gnl|cdd|30899 : 270.0) no description available & (q7g8y3|isw2_orysa : 127.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2304.0) & (original description: Putative SWI2, Description = Switch 2, PFAM = PF00176;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00984_148103-154333' '(at2g01900 : 536.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 259.0) no description available & (gnl|cdd|47467 : 202.0) no description available & (reliability: 1072.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01005_459274-506273' '(at2g14050 : 968.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35698 : 566.0) no description available & (gnl|cdd|31434 : 412.0) no description available & (q43704|mcm3_maize : 207.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1936.0) & (original description: Putative MCM9, Description = Probable DNA helicase MCM9, PFAM = PF00493;PF17207)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01033_71841-74564' '(at1g14900 : 80.1) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF00538;PF02178;PF02178;PF02178)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01061_6068-18355' '(at5g06310 : 250.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 139.0) no description available & (gnl|cdd|72969 : 114.0) no description available & (reliability: 456.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01072_169384-179928' '(at5g41150 : 1153.0) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins; ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); Has 503 Blast hits to 463 proteins in 204 species: Archae - 16; Bacteria - 0; Metazoa - 188; Fungi - 168; Plants - 53; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|35663 : 766.0) no description available & (gnl|cdd|32131 : 137.0) no description available & (reliability: 2306.0) & (original description: Putative rad1, Description = DNA repair endonuclease UVH1, PFAM = PF02732)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01075_160854-170228' '(at1g73875 : 438.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37549 : 164.0) no description available & (gnl|cdd|34836 : 105.0) no description available & (reliability: 876.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01075_161441-169689' '(at1g73875 : 399.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37549 : 146.0) no description available & (gnl|cdd|34836 : 97.3) no description available & (reliability: 798.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01076_451822-459540' '(at1g01370 : 129.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 118.0) no description available & (gnl|cdd|47735 : 115.0) no description available & (q5dwi3|h3_marpo : 88.6) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 258.0) & (original description: Putative HTR12, Description = Histone H3-like centromeric protein HTR12, PFAM = PF00125)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 540.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01124_2743415-2754254' '(at5g41150 : 1111.0) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins; ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); Has 503 Blast hits to 463 proteins in 204 species: Archae - 16; Bacteria - 0; Metazoa - 188; Fungi - 168; Plants - 53; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|35663 : 766.0) no description available & (gnl|cdd|32131 : 138.0) no description available & (reliability: 2222.0) & (original description: Putative UVH1, Description = DNA repair endonuclease UVH1, PFAM = PF02732)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01190_17401-26894' '(at2g16440 : 1137.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35699 : 860.0) no description available & (gnl|cdd|47677 : 619.0) no description available & (q43704|mcm3_maize : 301.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2274.0) & (original description: Putative MCM4, Description = DNA replication licensing factor MCM4, PFAM = PF14551;PF17207;PF00493)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01249_3771-8761' '(at2g01900 : 410.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 261.0) no description available & (gnl|cdd|47467 : 223.0) no description available & (reliability: 820.0) & (original description: Putative BnaAnng33950D, Description = BnaAnng33950D protein, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01281_206566-216003' '(gnl|cdd|37891 : 738.0) no description available & (at5g67630 : 709.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31417 : 586.0) no description available & (reliability: 1418.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01281_765315-795336' '(at3g06980 : 562.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 301.0) no description available & (gnl|cdd|30859 : 263.0) no description available & (p35683|if4a_orysa : 103.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1124.0) & (original description: Putative Os03g0108600, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01284_448792-501472' '(at5g04895 : 1770.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|36138 : 917.0) no description available & (gnl|cdd|31829 : 260.0) no description available & (reliability: 3540.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF00035;PF07717;PF04408)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01341_230806-249418' '(at5g44750 : 982.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48487 : 527.0) no description available & (gnl|cdd|37304 : 481.0) no description available & (reliability: 1964.0) & (original description: Putative REV1, Description = DNA repair protein REV1, PFAM = PF11799;PF00817;PF16589)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01382_431314-450462' '(at5g22010 : 874.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37179 : 276.0) no description available & (gnl|cdd|81320 : 216.0) no description available & (reliability: 1748.0) & (original description: Putative RFC1, Description = Replication factor C subunit 1, PFAM = PF00533;PF00004;PF08519)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01382_520131-531083' '(at4g15850 : 649.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 432.0) no description available & (gnl|cdd|30859 : 215.0) no description available & (q41382|rh7_spiol : 115.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1298.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01402_58520-61467' '(at2g47450 : 365.0) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.; CHAOS (CAO); FUNCTIONS IN: chromatin binding; INVOLVED IN: response to high light intensity, protein import into chloroplast thylakoid membrane; LOCATED IN: chloroplast thylakoid membrane, chloroplast, signal recognition particle, chloroplast targeting, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Chromo domain-like (InterPro:IPR016197), Chromo domain (InterPro:IPR000953), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.5); Has 25373 Blast hits to 13489 proteins in 848 species: Archae - 87; Bacteria - 2575; Metazoa - 11620; Fungi - 2006; Plants - 1049; Viruses - 137; Other Eukaryotes - 7899 (source: NCBI BLink). & (q8lsq2|sr43c_orysa : 311.0) Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|29261 : 86.3) no description available & (reliability: 730.0) & (original description: Putative CAO, Description = Signal recognition particle 43 kDa protein, chloroplastic, PFAM = PF12796;PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01440_177928-191518' '(at5g06260 : 542.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37768 : 403.0) no description available & (gnl|cdd|47882 : 167.0) no description available & (reliability: 1084.0) & (original description: Putative BnaA10g30570D, Description = BnaA10g30570D protein, PFAM = PF07534)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01460_166368-172864' '(at3g55490 : 201.0) GINS complex protein; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf3 (InterPro:IPR010492), GINS complex (InterPro:IPR021151); BEST Arabidopsis thaliana protein match is: GINS complex protein (TAIR:AT1G19080.2); Has 336 Blast hits to 336 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 114; Plants - 49; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36322 : 135.0) no description available & (gnl|cdd|87078 : 130.0) no description available & (reliability: 402.0) & (original description: Putative TTN10, Description = At1g19080, PFAM = PF05916)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01479_180813-199232' '(at1g65810 : 660.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 418.0) no description available & (gnl|cdd|31309 : 163.0) no description available & (reliability: 1320.0) & (original description: Putative At5g37160, Description = Similarity to DNA helicase, PFAM = PF13086;PF13087;PF00580)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01479_185244-199244' '(at1g65810 : 659.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 419.0) no description available & (gnl|cdd|31309 : 164.0) no description available & (reliability: 1318.0) & (original description: Putative At5g37140, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087;PF00580)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01494_512165-537230' '(at1g10520 : 707.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 291.0) no description available & (gnl|cdd|37745 : 237.0) no description available & (reliability: 1414.0) & (original description: Putative poll, Description = DNA polymerase lambda, PFAM = PF10391;PF14792;PF14791;PF00533;PF14716)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01494_562806-571457' '(at1g59990 : 590.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (gnl|cdd|35554 : 310.0) no description available & (gnl|cdd|30859 : 112.0) no description available & (reliability: 1180.0) & (original description: Putative rh22, Description = DEA(D/H)-box RNA helicase family protein, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01513_35336-40849' '(at4g12740 : 467.0) HhH-GPD base excision DNA repair family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), DNA glycosylase (InterPro:IPR011257), NUDIX hydrolase domain (InterPro:IPR000086), HhH-GPD domain (InterPro:IPR003265); Has 55833 Blast hits to 29061 proteins in 2861 species: Archae - 372; Bacteria - 10631; Metazoa - 17750; Fungi - 4523; Plants - 1695; Viruses - 834; Other Eukaryotes - 20028 (source: NCBI BLink). & (gnl|cdd|37668 : 370.0) no description available & (gnl|cdd|31387 : 315.0) no description available & (reliability: 934.0) & (original description: Putative Mutyh, Description = Adenine DNA glycosylase, PFAM = PF14815;PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01538_16751-23122' '(at5g17690 : 165.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 144.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01634_554198-570034' '(at2g41460 : 517.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31052 : 260.0) no description available & (p51173|apea_dicdi : 221.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (gnl|cdd|36508 : 215.0) no description available & (reliability: 1034.0) & (original description: Putative ARP, Description = DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, PFAM = PF02037;PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01664_223974-234202' '(at5g66130 : 480.0) Encodes a homolog to yeast RAD17. Involved in the regulation of DNA damage repair and homologous recombination. Mutant has increased sensitivity to MMS and increased telomere lengths.; RADIATION SENSITIVE 17 (ATRAD17); INVOLVED IN: regulation of DNA repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Checkpoint protein Rad24 (InterPro:IPR004582); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G77620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37181 : 265.0) no description available & (gnl|cdd|66861 : 156.0) no description available & (reliability: 960.0) & (original description: Putative RAD17, Description = Cell cycle checkpoint protein RAD17, PFAM = PF03215)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01697_1942926-1947037' '(at5g46580 : 984.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G16390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1968.0) & (original description: Putative At5g46580, Description = Pentatricopeptide repeat-containing protein At5g46580, chloroplastic, PFAM = PF13041;PF13812;PF17177)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01716_87586-92065' '(at4g29910 : 518.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37754 : 326.0) no description available & (reliability: 1036.0) & (original description: Putative ORC5, Description = Origin of replication complex subunit 5, PFAM = PF13191;PF14630)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01727_736310-829496' '(at1g18800 : 279.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 175.0) no description available & (gnl|cdd|85149 : 138.0) no description available & (reliability: 558.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01739_221380-240126' '(at5g44800 : 1640.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (gnl|cdd|35605 : 604.0) no description available & (q7g8y3|isw2_orysa : 345.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 305.0) no description available & (reliability: 3280.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06465;PF00176;PF00628;PF00385;PF00385;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01749_258043-288608' '(at2g28290 : 1144.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 849.0) no description available & (q7g8y3|isw2_orysa : 347.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 338.0) no description available & (reliability: 2288.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619;PF00271;PF00176)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01749_262583-266312' '(at2g28290 : 113.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01764_244388-253386' '(at3g18600 : 714.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 637.0) no description available & (gnl|cdd|30859 : 329.0) no description available & (p46942|db10_nicsy : 181.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1428.0) & (original description: Putative RH51, Description = DEAD-box ATP-dependent RNA helicase 51, PFAM = PF13959;PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01777_45258-50298' '(at2g19480 : 299.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 231.0) no description available & (gnl|cdd|85149 : 217.0) no description available & (reliability: 598.0) & (original description: Putative 1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01782_392457-415925' '(at3g09100 : 563.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 264.0) no description available & (gnl|cdd|85390 : 179.0) no description available & (reliability: 1126.0) & (original description: Putative At3g09100, Description = mRNA capping enzyme family protein, PFAM = PF01331;PF03919;PF00782)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01782_407200-410068' '(at5g01290 : 181.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 158.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01789_205180-213363' '(at2g07690 : 1117.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (gnl|cdd|35702 : 986.0) no description available & (gnl|cdd|47677 : 586.0) no description available & (q43704|mcm3_maize : 289.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2234.0) & (original description: Putative MCM5, Description = DNA replication licensing factor MCM5, PFAM = PF00493;PF17207;PF14551)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01802_202968-217119' '(o48653|dpola_orysa : 1785.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 1706.0) Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36188 : 1250.0) no description available & (gnl|cdd|84550 : 378.0) no description available & (reliability: 3412.0) & (original description: Putative POLA1, Description = DNA polymerase, PFAM = PF00136;PF08996;PF03104;PF12254)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01826_802747-810851' '(at3g48425 : 546.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins in 1998 species: Archae - 119; Bacteria - 3923; Metazoa - 218; Fungi - 82; Plants - 109; Viruses - 0; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|36508 : 215.0) no description available & (gnl|cdd|31052 : 166.0) no description available & (p51173|apea_dicdi : 124.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (reliability: 1092.0) & (original description: Putative APE1L, Description = DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01831_314963-360214' '(at5g57160 : 783.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 689.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 507.0) no description available & (gnl|cdd|80824 : 181.0) no description available & (reliability: 1566.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF01068;PF04679;PF04675)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01852_331002-334819' '(at1g62670 : 409.0) Encodes a pentatricopeptide repeat protein required for 5' end processing of nad9 and cox3 mRNAs in mitochondria.; rna processing factor 2 (RPF2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G62930.1); Has 71790 Blast hits to 15506 proteins in 316 species: Archae - 6; Bacteria - 84; Metazoa - 1433; Fungi - 1460; Plants - 65974; Viruses - 0; Other Eukaryotes - 2833 (source: NCBI BLink). & (q76c99|rf1_orysa : 290.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 794.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01888_763768-773265' '(at1g21690 : 567.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (gnl|cdd|36207 : 372.0) no description available & (gnl|cdd|80670 : 318.0) no description available & (reliability: 1134.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF08542;PF00004)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01977_91980-98965' '(at1g01370 : 122.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 116.0) no description available & (gnl|cdd|47735 : 113.0) no description available & (q5dwi3|h3_marpo : 87.0) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 244.0) & (original description: Putative HTR12, Description = Centromeric histone, PFAM = PF00125)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01978_128084-136081' '(at1g18800 : 221.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 143.0) no description available & (gnl|cdd|85149 : 139.0) no description available & (reliability: 442.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02012_75524-91416' '(at1g70070 : 1503.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 889.0) no description available & (gnl|cdd|34219 : 503.0) no description available & (reliability: 3006.0) & (original description: Putative ISE2, Description = DExH-box ATP-dependent RNA helicase DExH15 chloroplastic, PFAM = PF00271;PF00270;PF08148)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02015_518129-526956' '(at2g23840 : 318.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes - 2425 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative mcrA, Description = HNH endonuclease family protein, PFAM = PF14279)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02030_113634-130146' '(at1g79950 : 1055.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of transcription, DNA-dependent, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3149 Blast hits to 2661 proteins in 831 species: Archae - 223; Bacteria - 987; Metazoa - 718; Fungi - 431; Plants - 207; Viruses - 6; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36347 : 727.0) no description available & (gnl|cdd|31392 : 235.0) no description available & (reliability: 2110.0) & (original description: Putative Os01g0592900, Description = Os01g0592900 protein, PFAM = PF06733;PF13307)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02031_701500-707940' '(at2g19480 : 390.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 294.0) no description available & (gnl|cdd|85149 : 265.0) no description available & (reliability: 780.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02031_956762-963341' '(at2g19490 : 516.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82947 : 460.0) no description available & (gnl|cdd|36646 : 196.0) no description available & (reliability: 1032.0) & (original description: Putative recA, Description = Protein RecA, PFAM = PF00154)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02045_602681-607378' '(at1g12300 : 106.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 69404 Blast hits to 15469 proteins in 318 species: Archae - 6; Bacteria - 74; Metazoa - 1057; Fungi - 1243; Plants - 64555; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (p93263|mete_mescr : 92.4) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Mesembryanthemum crystallinum (Common ice pl & (gnl|cdd|37474 : 87.8) no description available & (reliability: 200.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF13041;PF01717;PF01535)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02100_19942-23411' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 260.0) no description available & (gnl|cdd|30471 : 161.0) no description available & (reliability: 628.0) & (original description: Putative PHYPADRAFT_217626, Description = Predicted protein, PFAM = PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02105_25809-32345' '(at1g31360 : 166.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative RQL2, Description = ATP-dependent DNA helicase Q-like 2, PFAM = PF00570)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02107_273703-277772' '(at1g30010 : 954.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT5G46920.1); Has 4269 Blast hits to 4093 proteins in 800 species: Archae - 33; Bacteria - 3762; Metazoa - 5; Fungi - 54; Plants - 249; Viruses - 3; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|73157 : 163.0) no description available & (p38456|ymf11_marpo : 124.0) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39965 : 104.0) no description available & (reliability: 1908.0) & (original description: Putative Sb01g044780, Description = Putative uncharacterized protein Sb01g044780, PFAM = PF00078;PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02190_430006-440192' '(at2g43900 : 1488.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 221.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 2976.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02195_389756-393446' '(at3g50390 : 482.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 159.0) no description available & (gnl|cdd|35495 : 104.0) no description available & (reliability: 926.0) & (original description: Putative wdrp, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02197_141692-147580' '(at1g77470 : 543.0) Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.; replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink). & (gnl|cdd|36208 : 425.0) no description available & (gnl|cdd|80670 : 311.0) no description available & (reliability: 1086.0) & (original description: Putative RFC3, Description = Replication factor C subunit 3, PFAM = PF08542;PF00004)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02230_391208-450920' '(q9lre6|dpod1_orysa : 1789.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1749.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 1569.0) no description available & (gnl|cdd|30766 : 582.0) no description available & (reliability: 3498.0) & (original description: Putative POLD1, Description = DNA polymerase delta catalytic subunit, PFAM = PF00136;PF14260;PF03104)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02266_120656-156136' '(at3g48900 : 581.0) single-stranded DNA endonuclease family protein; FUNCTIONS IN: chromatin binding, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair, chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), Chromo domain-like (InterPro:IPR016197), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Chromo domain (InterPro:IPR000953), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37730 : 212.0) no description available & (gnl|cdd|29030 : 205.0) no description available & (reliability: 1162.0) & (original description: Putative GEN2, Description = Flap endonuclease GEN-like 2, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02306_220409-228305' '(at5g49010 : 211.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 134.0) no description available & (gnl|cdd|38386 : 123.0) no description available & (reliability: 422.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02320_74043-75728' '(at1g20960 : 387.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 322.0) no description available & (gnl|cdd|86167 : 132.0) no description available & (reliability: 774.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF02889)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02334_155388-160570' '(at1g63990 : 530.0) Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction.; sporulation 11-2 (SPO11-2); FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding; INVOLVED IN: in 11 processes; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 890 Blast hits to 889 proteins in 304 species: Archae - 214; Bacteria - 14; Metazoa - 169; Fungi - 107; Plants - 162; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|38006 : 331.0) no description available & (gnl|cdd|31883 : 198.0) no description available & (reliability: 1060.0) & (original description: Putative spo11, Description = Meiotic recombination protein SPO11-2, PFAM = PF04406)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02392_31053-35120' '(at5g65630 : 290.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 200.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 542.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02402_117299-147547' '(at4g00660 : 813.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 779.0) no description available & (gnl|cdd|30859 : 364.0) no description available & (p35683|if4a_orysa : 287.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative RH8, Description = DEAD-box ATP-dependent RNA helicase 8, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02405_603195-612901' '(at3g53110 : 501.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 407.0) no description available & (gnl|cdd|30859 : 223.0) no description available & (p41380|if4a3_nicpl : 172.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1002.0) & (original description: Putative DBP5, Description = LOS4, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02423_345956-367322' '(at5g16690 : 576.0) Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 3 (ORC3); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 3, N-terminal (InterPro:IPR010748), Origin recognition complex, subunit 3 (InterPro:IPR020795); Has 319 Blast hits to 284 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 89; Plants - 45; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|70496 : 234.0) no description available & (gnl|cdd|37749 : 110.0) no description available & (reliability: 1152.0) & (original description: Putative ORC3, Description = Origin of replication complex subunit 3, PFAM = PF07034;PF07034)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02444_10406-101005' '(at1g35530 : 728.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|35575 : 284.0) no description available & (gnl|cdd|31308 : 284.0) no description available & (reliability: 1456.0) & (original description: Putative TCM_036398, Description = DEAD/DEAH box RNA helicase family protein, putative isoform 2, PFAM = PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02451_499003-606110' '(at5g63920 : 1118.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 496.0) no description available & (gnl|cdd|30896 : 342.0) no description available & (reliability: 2236.0) & (original description: Putative TOP3A, Description = DNA topoisomerase 3-alpha, PFAM = PF01751;PF01396;PF06839;PF00098;PF00098;PF01131;PF01131)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02486_354227-367818' '(at5g26680 : 603.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 581.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 437.0) no description available & (gnl|cdd|29030 : 387.0) no description available & (reliability: 1206.0) & (original description: Putative FEN1, Description = Flap endonuclease 1, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02544_24228-29121' '(at1g11800 : 395.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 254.0) no description available & (reliability: 790.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02558_33900-39423' '(at1g77180 : 343.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|37652 : 301.0) no description available & (gnl|cdd|66416 : 180.0) no description available & (reliability: 686.0) & (original description: Putative puff, Description = Puff-specific protein Bx42, PFAM = PF02731)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02627_12982-23537' '(at3g20540 : 1159.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (gnl|cdd|31092 : 252.0) no description available & (gnl|cdd|36168 : 113.0) no description available & (reliability: 2318.0) & (original description: Putative POLIA, Description = DNA polymerase I A, chloroplastic/mitochondrial, PFAM = PF01612;PF00476)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02693_246369-256020' '(at4g02060 : 1182.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (gnl|cdd|35703 : 1038.0) no description available & (gnl|cdd|47677 : 643.0) no description available & (q43704|mcm3_maize : 275.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2364.0) & (original description: Putative MCM7, Description = DNA replication licensing factor MCM7, PFAM = PF00493;PF17207;PF14551)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02752_502737-521035' '(at3g06400 : 1652.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1627.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1094.0) no description available & (gnl|cdd|84584 : 334.0) no description available & (reliability: 3286.0) & (original description: Putative CHR17, Description = ISWI chromatin-remodeling complex ATPase CHR17, PFAM = PF00176;PF00271;PF09111;PF09110)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02793_1174733-1188294' '(at3g58560 : 893.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 347.0) no description available & (gnl|cdd|34836 : 173.0) no description available & (reliability: 1786.0) & (original description: Putative At3g58560, Description = Endonuclease/exonuclease/phosphatase, PFAM = PF15801;PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02793_1728417-1750996' '(at2g42120 : 687.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 616.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 483.0) no description available & (gnl|cdd|67651 : 176.0) no description available & (reliability: 1374.0) & (original description: Putative POLD2, Description = DNA polymerase delta small subunit, PFAM = PF04042)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02819_426588-431903' '(at5g32440 : 211.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 422.0) & (original description: Putative At5g32440, Description = Ubiquitin system component Cue protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02829_921379-926208' '(at3g63240 : 743.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 189.0) no description available & (reliability: 1486.0) & (original description: Putative IP5P4, Description = Type I inositol polyphosphate 5-phosphatase 4, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02831_611011-617805' '(at5g56950 : 317.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 295.0) no description available & (gnl|cdd|85149 : 257.0) no description available & (reliability: 634.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02846_65920-72328' '(at2g31270 : 261.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|39959 : 161.0) no description available & (gnl|cdd|87677 : 124.0) no description available & (reliability: 522.0) & (original description: Putative , Description = , PFAM = PF08839;PF16679)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02853_514370-523441' '(at4g24790 : 545.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 293.0) no description available & (gnl|cdd|32641 : 249.0) no description available & (reliability: 1090.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02887_105419-117897' '(at1g09815 : 127.0) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative POLD4, Description = At1g09815, PFAM = PF04081)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02927_1025244-1039436' '(at3g58560 : 924.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 352.0) no description available & (gnl|cdd|34836 : 180.0) no description available & (reliability: 1848.0) & (original description: Putative CCR4-2, Description = Carbon catabolite repressor protein 4 homolog 2, PFAM = PF03372;PF15801)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03006_604073-614612' '(at3g57060 : 1758.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (gnl|cdd|35635 : 1015.0) no description available & (gnl|cdd|34701 : 351.0) no description available & (reliability: 3516.0) & (original description: Putative CPD1501, Description = Chromosome condensation complex protein, PFAM = PF12765;PF12717;PF12922)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03100_168240-179697' '(at5g32440 : 211.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 422.0) & (original description: Putative BnaC07g09870D, Description = BnaC07g09870D protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03224_991541-999694' '(at5g32440 : 190.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 380.0) & (original description: Putative Os08g0314200, Description = Os08g0314200 protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03236_421279-436627' '(at1g18800 : 255.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 172.0) no description available & (gnl|cdd|85149 : 129.0) no description available & (reliability: 510.0) & (original description: Putative nfa103, Description = Nucleosome/chromatin assembly factor A, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03283_569822-577365' '(at3g10140 : 418.0) RECA homolog 3 (RECA3); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19406 Blast hits to 19280 proteins in 5632 species: Archae - 329; Bacteria - 14407; Metazoa - 165; Fungi - 231; Plants - 211; Viruses - 99; Other Eukaryotes - 3964 (source: NCBI BLink). & (gnl|cdd|29984 : 381.0) no description available & (gnl|cdd|36646 : 150.0) no description available & (reliability: 836.0) & (original description: Putative recA, Description = Protein RecA, PFAM = PF00154)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03293_53151-65692' '(at3g58560 : 893.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 344.0) no description available & (gnl|cdd|34836 : 173.0) no description available & (reliability: 1786.0) & (original description: Putative CCR4-1, Description = Carbon catabolite repressor protein 4 homolog 1, PFAM = PF15801;PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03321_415233-425280' '(at2g43900 : 1501.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 228.0) no description available & (gnl|cdd|47467 : 214.0) no description available & (reliability: 3002.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03424_100610-107323' '(at2g05210 : 224.0) Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; Protection of Telomeres 1a (AtPOT1a); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39954 : 134.0) no description available & (gnl|cdd|72969 : 112.0) no description available & (reliability: 448.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03455_553628-561795' '(at5g46280 : 973.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35700 : 938.0) no description available & (q43704|mcm3_maize : 829.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (gnl|cdd|47677 : 584.0) no description available & (reliability: 1946.0) & (original description: Putative ROA1, Description = DNA replication licensing factor MCM3 homolog 1, PFAM = PF00493;PF17207;PF14551)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03595_453452-456712' '(at1g18680 : 196.0) HNH endonuclease domain-containing protein; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease (TAIR:AT3G47490.1); Has 84 Blast hits to 84 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At1g18680, Description = HNH endonuclease domain-containing protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03595_1980343-1995868' '(at3g18630 : 375.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|81482 : 328.0) no description available & (gnl|cdd|38205 : 319.0) no description available & (reliability: 750.0) & (original description: Putative ung, Description = UDG, PFAM = PF03167)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03710_1199273-1204843' '(at1g77470 : 529.0) Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.; replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink). & (gnl|cdd|36208 : 420.0) no description available & (gnl|cdd|80670 : 310.0) no description available & (reliability: 1058.0) & (original description: Putative RFC5, Description = Replication factor C subunit 5, PFAM = PF08542;PF00004)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03785_50916-58953' '(at2g03390 : 394.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 111.0) no description available & (reliability: 788.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF02151;PF08755)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03965_1535-25320' '(at3g09100 : 828.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 343.0) no description available & (gnl|cdd|85390 : 229.0) no description available & (reliability: 1656.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF03919;PF01331;PF00782)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04096_246876-268267' '(at3g48900 : 575.0) single-stranded DNA endonuclease family protein; FUNCTIONS IN: chromatin binding, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair, chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), Chromo domain-like (InterPro:IPR016197), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Chromo domain (InterPro:IPR000953), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37730 : 210.0) no description available & (gnl|cdd|29030 : 203.0) no description available & (reliability: 1150.0) & (original description: Putative GEN2, Description = Flap endonuclease GEN-like 2, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04109_497191-507412' '(at1g48650 : 161.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04113_1420569-1423567' '(at1g19480 : 314.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 263.0) no description available & (gnl|cdd|30471 : 177.0) no description available & (reliability: 616.0) & (original description: Putative glysoja_023078, Description = Putative DNA-3-methyladenine glycosylase yfjP, PFAM = PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04180_26969-41172' '(at2g31450 : 340.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 320.0) no description available & (gnl|cdd|30526 : 203.0) no description available & (reliability: 680.0) & (original description: Putative NTHL1, Description = Endonuclease III-like protein 1, PFAM = PF00730;PF00633)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04198_437447-470503' '(at5g04130 : 1049.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 1020.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 943.0) no description available & (gnl|cdd|35576 : 594.0) no description available & (reliability: 2098.0) & (original description: Putative GYRB, Description = DNA gyrase subunit B, chloroplastic/mitochondrial, PFAM = PF02518;PF00986;PF01751;PF00204)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04198_798338-830260' '(at2g13840 : 491.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|30958 : 149.0) no description available & (reliability: 982.0) & (original description: Putative BnaA03g38520D, Description = BnaA03g38520D protein, PFAM = PF02811)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04232_43501-53798' '(at2g47330 : 994.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (gnl|cdd|35560 : 823.0) no description available & (gnl|cdd|30859 : 388.0) no description available & (p46942|db10_nicsy : 325.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1988.0) & (original description: Putative RH24, Description = DEAD-box ATP-dependent RNA helicase 24, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04313_30472-33661' '(at3g50360 : 210.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (gnl|cdd|35251 : 162.0) no description available & (p05434|catr_chlre : 157.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 110.0) no description available & (reliability: 420.0) & (original description: Putative ce1, Description = Centrin, PFAM = PF13499;PF13499)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04375_843660-848843' '(at5g23520 : 246.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PGSC0003DMG400023332, Description = Putative uncharacterized protein Sb06g017530, PFAM = PF01713;PF08590)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04383_110318-114171' '(at3g18950 : 464.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 127.0) no description available & (gnl|cdd|35495 : 82.8) no description available & (reliability: 928.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04418_947256-974343' '(at2g35920 : 524.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (gnl|cdd|36138 : 407.0) no description available & (gnl|cdd|31829 : 240.0) no description available & (reliability: 1048.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04758_42397-49488' '(at5g45400 : 742.0) RPA70C; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33; Bacteria - 8; Metazoa - 314; Fungi - 240; Plants - 399; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|72071 : 218.0) no description available & (reliability: 1484.0) & (original description: Putative RPA1C, Description = Replication protein A 70 kDa DNA-binding subunit C, PFAM = PF08646;PF01336;PF04057;PF16900;PF00098;PF00098)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04764_607508-666034' '(at4g32700 : 968.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 513.0) no description available & (gnl|cdd|31092 : 290.0) no description available & (reliability: 1936.0) & (original description: Putative helq, Description = DNA polymerase theta, PFAM = PF00476;PF00270;PF00271;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04787_375431-379160' '(at3g18950 : 461.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 118.0) no description available & (gnl|cdd|35495 : 81.3) no description available & (reliability: 922.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04889_56755-61115' '(at5g56780 : 249.0) effector of transcription2 (ET2); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26170.1); Has 86 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative ET3, Description = AtET3, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04905_15058-24235' '(at1g27850 : 476.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). & (reliability: 952.0) & (original description: Putative PGSC0003DMG400017461, Description = , PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04944_56085-83070' '(at5g11350 : 335.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G73875.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37549 : 172.0) no description available & (gnl|cdd|34836 : 92.3) no description available & (reliability: 670.0) & (original description: Putative DXPS3, Description = CCR4 homolog 3, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04994_36264-49108' '(at1g47510 : 382.0) Encodes a phosphatidylinositol polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA.; inositol polyphosphate 5-phosphatase 11 (5PTASE11); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G65580.1). & (gnl|cdd|35786 : 187.0) no description available & (gnl|cdd|34970 : 161.0) no description available & (reliability: 764.0) & (original description: Putative IP5P11, Description = Type IV inositol polyphosphate 5-phosphatase 11, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05025_998359-1013956' '(at5g35910 : 759.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 438.0) no description available & (gnl|cdd|85567 : 161.0) no description available & (reliability: 1518.0) & (original description: Putative RRP6L2, Description = Protein RRP6-like 2, PFAM = PF01612;PF00570;PF08066)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05040_22046-40861' '(at1g05630 : 616.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative D50, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05056_245894-253286' '(at1g63160 : 612.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (gnl|cdd|36209 : 562.0) no description available & (gnl|cdd|80670 : 341.0) no description available & (reliability: 1224.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05056_395117-404649' '(at2g31450 : 368.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 346.0) no description available & (gnl|cdd|30526 : 207.0) no description available & (reliability: 736.0) & (original description: Putative NTH1, Description = Endonuclease III homolog 1, chloroplastic, PFAM = PF00730;PF00633)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05081_47571-57863' '(at2g37025 : 118.0) TRF-like 8 (TRFL8); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 6 (TAIR:AT1G72650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative MYB28, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05107_56174-60191' '(at3g02065 : 676.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 312.0) no description available & (gnl|cdd|30859 : 287.0) no description available & (p46942|db10_nicsy : 231.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1352.0) & (original description: Putative RH41, Description = DEAD-box ATP-dependent RNA helicase 41, PFAM = PF04438;PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1008.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05183_160088-165552' '(at5g49010 : 238.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 141.0) no description available & (gnl|cdd|38386 : 135.0) no description available & (reliability: 476.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916;PF16922)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05206_3703-10506' '(at3g12530 : 229.0) PSF2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Psf2 (InterPro:IPR007257), GINS complex, subunit Psf2, subgroup (InterPro:IPR016906); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86554 : 206.0) no description available & (gnl|cdd|39274 : 197.0) no description available & (reliability: 458.0) & (original description: Putative GINS2, Description = DNA replication complex GINS protein PSF2, PFAM = PF05916)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05301_580030-585120' '(at2g48030 : 464.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05311_9576-15395' '(at5g32440 : 209.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 418.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05367_122569-138996' '(at3g54350 : 251.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 177.0) no description available & (reliability: 502.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF00498;PF13325)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05422_141133-148282' '(at1g34380 : 403.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 160.0) no description available & (reliability: 806.0) & (original description: Putative BnaC06g08260D, Description = BnaC06g08260D protein, PFAM = PF01367;PF02739)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05483_611482-622959' '(at3g22790 : 785.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (gnl|cdd|35383 : 119.0) no description available & (gnl|cdd|71206 : 119.0) no description available & (reliability: 1466.0) & (original description: Putative KIP1, Description = BnaA03g14020D protein, PFAM = PF07765)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05535_13358-17616' '(at5g04050 : 688.0) RNA-directed DNA polymerase (reverse transcriptase); FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1); Has 3089 Blast hits to 3057 proteins in 1086 species: Archae - 3; Bacteria - 2166; Metazoa - 8; Fungi - 43; Plants - 770; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|73157 : 122.0) no description available & (gnl|cdd|39965 : 85.1) no description available & (reliability: 1376.0) & (original description: Putative At5g04050, Description = RNA-directed DNA polymerase (Reverse transcriptase), PFAM = PF00078;PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05671_28703-85987' '(at4g32700 : 1516.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 578.0) no description available & (gnl|cdd|31397 : 294.0) no description available & (reliability: 3032.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00476;PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05674_655096-658535' '(at3g50390 : 492.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 143.0) no description available & (gnl|cdd|35487 : 96.4) no description available & (reliability: 940.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05805_240707-246515' '(at4g36050 : 126.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative apex2, Description = DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF06839)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05932_597753-606989' '(at5g26680 : 616.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 595.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 441.0) no description available & (gnl|cdd|29030 : 396.0) no description available & (reliability: 1232.0) & (original description: Putative FEN1b, Description = Flap endonuclease 1-B, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06008_1-4775' '(at5g08020 : 847.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 172.0) no description available & (reliability: 1694.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF04057;PF16900;PF08646;PF01336)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06091_642418-648635' '(at5g32440 : 202.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 404.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06189_407432-410172' '(at5g04110 : 130.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF01448)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06280_4716-7819' '(at2g47450 : 352.0) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.; CHAOS (CAO); FUNCTIONS IN: chromatin binding; INVOLVED IN: response to high light intensity, protein import into chloroplast thylakoid membrane; LOCATED IN: chloroplast thylakoid membrane, chloroplast, signal recognition particle, chloroplast targeting, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Chromo domain-like (InterPro:IPR016197), Chromo domain (InterPro:IPR000953), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.5); Has 25373 Blast hits to 13489 proteins in 848 species: Archae - 87; Bacteria - 2575; Metazoa - 11620; Fungi - 2006; Plants - 1049; Viruses - 137; Other Eukaryotes - 7899 (source: NCBI BLink). & (q8lsq2|sr43c_orysa : 295.0) Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|29261 : 90.1) no description available & (reliability: 704.0) & (original description: Putative CAO, Description = Signal recognition particle 43 kDa protein, chloroplastic, PFAM = PF00385;PF13857)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06295_520713-523441' '(at3g45590 : 272.0) Encodes a catalytic subunit of tRNA splicing endonuclease.; splicing endonuclease 1 (SEN1); FUNCTIONS IN: tRNA-intron endonuclease activity, nuclease activity, nucleic acid binding; INVOLVED IN: tRNA splicing, via endonucleolytic cleavage and ligation; LOCATED IN: tRNA-intron endonuclease complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-intron endonuclease (InterPro:IPR006676), tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 2 (TAIR:AT5G60230.2); Has 489 Blast hits to 489 proteins in 224 species: Archae - 131; Bacteria - 0; Metazoa - 123; Fungi - 137; Plants - 68; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 216.0) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (gnl|cdd|39883 : 200.0) no description available & (gnl|cdd|82925 : 85.3) no description available & (reliability: 544.0) & (original description: Putative SEN1, Description = tRNA-splicing endonuclease subunit Sen2-1, PFAM = PF01974;PF02778)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06375_157245-166328' '(at4g30100 : 1607.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|37012 : 499.0) no description available & (gnl|cdd|31309 : 199.0) no description available & (reliability: 3214.0) & (original description: Putative At2g19120, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06424_236653-245185' '(at2g31270 : 115.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|87677 : 115.0) no description available & (gnl|cdd|39959 : 93.9) no description available & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF08839)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06525_52987-70717' '(at2g32000 : 1373.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: endomembrane system, chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), DNA topoisomerase, type IA, core (InterPro:IPR000380), Toprim domain (InterPro:IPR006171), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37168 : 642.0) no description available & (gnl|cdd|30896 : 405.0) no description available & (reliability: 2746.0) & (original description: Putative top3b, Description = DNA topoisomerase, PFAM = PF01751;PF01131)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06603_146652-160645' '(at3g16710 : 176.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G41170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative , Description = , PFAM = PF12854;PF01535;PF01535;PF13041;PF13041)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06737_29658-37639' '(at4g24790 : 570.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 309.0) no description available & (gnl|cdd|32641 : 265.0) no description available & (reliability: 1140.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06825_18753-26624' '(at2g31270 : 115.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|87677 : 113.0) no description available & (gnl|cdd|39959 : 101.0) no description available & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF08839)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06862_126070-134730' '(at2g02480 : 1061.0) STICHEL mutant shows trichomes with fewer than normal branches.; STICHEL (STI); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding; INVOLVED IN: trichome differentiation, trichome branching; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins in 2818 species: Archae - 391; Bacteria - 8894; Metazoa - 533; Fungi - 525; Plants - 301; Viruses - 38; Other Eukaryotes - 4678 (source: NCBI BLink). & (gnl|cdd|36207 : 333.0) no description available & (gnl|cdd|32641 : 287.0) no description available & (reliability: 2122.0) & (original description: Putative STI, Description = Protein STICHEL, PFAM = PF13177;PF12169)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07002_50703-53772' '(at1g66730 : 207.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 183.0) no description available & (gnl|cdd|80824 : 122.0) no description available & (reliability: 414.0) & (original description: Putative adl1, Description = DNA ligase, PFAM = PF01068)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07002_52792-89309' '(at1g66730 : 1217.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 513.0) no description available & (gnl|cdd|80824 : 224.0) no description available & (reliability: 2434.0) & (original description: Putative cdc17, Description = DNA ligase, PFAM = PF01068;PF07522;PF04675)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07034_603004-614315' '(at3g54350 : 189.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 187.0) no description available & (reliability: 378.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF00498;PF13325)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07058_251214-255848' '(at1g26840 : 360.0) Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.; origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39757 : 238.0) no description available & (gnl|cdd|69009 : 212.0) no description available & (reliability: 720.0) & (original description: Putative ORC6, Description = Origin of replication complex subunit 6, PFAM = PF05460)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07113_56279-70523' '(at3g01810 : 442.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 812.0) & (original description: Putative BnaC04g02610D, Description = BnaC04g02610D protein, PFAM = PF10358)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07147_409878-416982' '(at3g13170 : 460.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 370.0) no description available & (gnl|cdd|31883 : 228.0) no description available & (reliability: 920.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07182_73453-80179' '(at2g31270 : 275.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|39959 : 174.0) no description available & (gnl|cdd|87677 : 134.0) no description available & (reliability: 550.0) & (original description: Putative , Description = , PFAM = PF08839;PF16679)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07183_17445-33163' '(at5g11170 : 787.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 611.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (p35683|if4a_orysa : 244.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1574.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07191_232290-237051' '(at5g23120 : 219.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 216.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 96.3) no description available & (gnl|cdd|38720 : 80.4) no description available & (reliability: 402.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07227_67261-72369' '(at3g55060 : 500.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 1000.0) & (original description: Putative BnaC06g15600D, Description = BnaC06g15600D protein, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07231_1-4757' '(at1g18680 : 232.0) HNH endonuclease domain-containing protein; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease (TAIR:AT3G47490.1); Has 84 Blast hits to 84 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative F6A14.21, Description = F6A14.21 protein, PFAM = PF01844)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07253_373015-381844' '(at1g65780 : 544.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 311.0) no description available & (gnl|cdd|31309 : 140.0) no description available & (reliability: 1088.0) & (original description: Putative At1g65810, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07287_152925-156006' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 259.0) no description available & (gnl|cdd|30471 : 159.0) no description available & (reliability: 614.0) & (original description: Putative BnaA06g13680D, Description = BnaA06g13680D protein, PFAM = PF00730)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07388_90784-93626' '(gnl|cdd|36777 : 243.0) no description available & (at5g57450 : 217.0) Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation; homolog of X-ray repair cross complementing 3 (XRCC3) (XRCC3); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51C (TAIR:AT2G45280.1); Has 2317 Blast hits to 2308 proteins in 507 species: Archae - 430; Bacteria - 4; Metazoa - 689; Fungi - 429; Plants - 393; Viruses - 0; Other Eukaryotes - 372 (source: NCBI BLink). & (gnl|cdd|29989 : 213.0) no description available & (reliability: 434.0) & (original description: Putative XRCC3, Description = DNA repair protein XRCC3 homolog, PFAM = PF08423)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07638_480935-488680' '(at5g11170 : 783.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 610.0) no description available & (gnl|cdd|30859 : 358.0) no description available & (p35683|if4a_orysa : 244.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1566.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07792_67673-84277' '(at1g65780 : 716.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 449.0) no description available & (gnl|cdd|31309 : 157.0) no description available & (reliability: 1432.0) & (original description: Putative At4g05540, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087;PF02891)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07981_198852-211017' '(at3g53110 : 577.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 464.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p41380|if4a3_nicpl : 210.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1154.0) & (original description: Putative DBP5, Description = ATP-dependent RNA helicase DBP5, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08111_265663-268384' '(at1g14900 : 83.6) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_36388-46241' '(at1g08840 : 252.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 217.0) no description available & (gnl|cdd|31309 : 111.0) no description available & (reliability: 504.0) & (original description: Putative DNA2, Description = DNA2, PFAM = PF13087;PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_36428-38930' '(at1g08840 : 118.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 83.5) no description available & (reliability: 236.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_37215-46018' '(at1g08840 : 122.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 112.0) no description available & (reliability: 244.0) & (original description: Putative dna2, Description = DNA replication ATP-dependent helicase Dna2, PFAM = PF13086)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08134_80892-91306' '(at5g55310 : 780.0) Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.; DNA topoisomerase 1 beta (TOP1BETA); FUNCTIONS IN: DNA topoisomerase type I activity; INVOLVED IN: DNA topological change; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type (InterPro:IPR013030), DNA topoisomerase I, DNA binding, eukaryotic-type (InterPro:IPR008336), DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010); BEST Arabidopsis thaliana protein match is: DNA topoisomerase I alpha (TAIR:AT5G55300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36199 : 776.0) no description available & (p93119|top1_dauca : 704.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (gnl|cdd|47742 : 504.0) no description available & (reliability: 1560.0) & (original description: Putative TOP1, Description = DNA topoisomerase 1, PFAM = PF14370;PF02919;PF01028)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08137_310334-317057' '(at5g22110 : 684.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|39022 : 345.0) no description available & (gnl|cdd|67651 : 168.0) no description available & (reliability: 1368.0) & (original description: Putative DPB2, Description = DNA polymerase epsilon subunit B, PFAM = PF04042;PF12213)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08156_561221-626140' '(at1g31360 : 969.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (gnl|cdd|35574 : 533.0) no description available & (gnl|cdd|30860 : 456.0) no description available & (reliability: 1938.0) & (original description: Putative MED34, Description = Mediator of RNA polymerase II transcription subunit 34, PFAM = PF00570;PF00270;PF00271;PF09382;PF16124)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08195_567258-579100' '(at1g29630 : 635.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37729 : 399.0) no description available & (gnl|cdd|29030 : 288.0) no description available & (q75li2|fen1b_orysa : 95.1) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative fenB, Description = Nuclease, Rad2 family, PFAM = PF00752;PF00867)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08228_429108-435231' '(at1g09815 : 139.0) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative POLD4, Description = At1g09815, PFAM = PF04081)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08333_855663-859438' '(at1g77180 : 580.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|37652 : 516.0) no description available & (gnl|cdd|66416 : 236.0) no description available & (reliability: 1160.0) & (original description: Putative SKIP, Description = SNW/SKI-interacting protein, PFAM = PF02731)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08526_118532-128218' '(at4g09730 : 665.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (gnl|cdd|35552 : 345.0) no description available & (gnl|cdd|30859 : 290.0) no description available & (p46942|db10_nicsy : 176.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1330.0) & (original description: Putative Os01g0184500, Description = DEAD-box ATP-dependent RNA helicase 39, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08621_14316-34298' '(at1g35530 : 412.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|31308 : 276.0) no description available & (gnl|cdd|35575 : 261.0) no description available & (reliability: 824.0) & (original description: Putative fml1, Description = Fanconi anemia group M protein, PFAM = PF04851)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08724_154599-164299' '(at1g20960 : 3081.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 2147.0) no description available & (gnl|cdd|31397 : 521.0) no description available & (reliability: 6162.0) & (original description: Putative BRR2A, Description = DExH-box ATP-dependent RNA helicase DExH12, PFAM = PF02889;PF02889;PF00270;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08724_490722-498192' '(at1g18800 : 272.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 144.0) no description available & (gnl|cdd|85149 : 138.0) no description available & (reliability: 544.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08755_356618-367804' '(at4g31210 : 1150.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), DNA topoisomerase I, bacterial-type (InterPro:IPR005733), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 21441 Blast hits to 18441 proteins in 2923 species: Archae - 440; Bacteria - 10015; Metazoa - 1777; Fungi - 750; Plants - 256; Viruses - 35; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|82830 : 825.0) no description available & (gnl|cdd|37167 : 484.0) no description available & (reliability: 2300.0) & (original description: Putative topA, Description = DNA topoisomerase 1, PFAM = PF01131;PF01396;PF01751;PF13368;PF13368)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09123_291572-315362' '(at3g09100 : 861.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 349.0) no description available & (gnl|cdd|85390 : 238.0) no description available & (reliability: 1722.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF01331;PF03919;PF00782)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09150_65892-80326' '(at3g06400 : 1535.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1488.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1007.0) no description available & (gnl|cdd|84584 : 339.0) no description available & (reliability: 2998.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF00271;PF09111;PF09110;PF00176)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09284_163519-167684' '(at5g46920 : 1110.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73157 : 154.0) no description available & (p38456|ymf11_marpo : 144.0) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39965 : 105.0) no description available & (reliability: 2220.0) & (original description: Putative At5g46920, Description = Intron maturase, type II family protein, PFAM = PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09547_121768-127150' '(at2g32010 : 815.0) Encodes an inositol polyphosphate 5Ã-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.; CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1). & (gnl|cdd|35786 : 225.0) no description available & (gnl|cdd|47467 : 197.0) no description available & (reliability: 1630.0) & (original description: Putative IP5P6, Description = Type IV inositol polyphosphate 5-phosphatase 6, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09596_189561-197545' '(at2g37440 : 528.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 231.0) no description available & (gnl|cdd|47467 : 194.0) no description available & (reliability: 1056.0) & (original description: Putative IP5P8, Description = Type I inositol polyphosphate 5-phosphatase 8, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09649_204219-213533' '(at4g09730 : 683.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (gnl|cdd|35552 : 343.0) no description available & (gnl|cdd|30859 : 292.0) no description available & (p46942|db10_nicsy : 177.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1366.0) & (original description: Putative RH39, Description = DEAD-box ATP-dependent RNA helicase 39, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09654_305439-308451' '(at1g14900 : 83.2) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative HMGa, Description = HMG-Y-related protein A, PFAM = PF00538;PF02178;PF02178;PF02178)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09760_110998-146496' '(at4g25120 : 1173.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3Ã- to 5Ã-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (gnl|cdd|30559 : 364.0) no description available & (gnl|cdd|37319 : 194.0) no description available & (reliability: 2346.0) & (original description: Putative SRS2, Description = ATP-dependent DNA helicase SRS2-like protein At4g25120, PFAM = PF00580;PF13361)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09908_17323-39416' '(at4g36050 : 425.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|31052 : 164.0) no description available & (gnl|cdd|36508 : 94.3) no description available & (reliability: 850.0) & (original description: Putative BnaC01g02590D, Description = BnaC01g02590D protein, PFAM = PF03372;PF06839)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_95884-123814' '(at1g08840 : 1354.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 884.0) no description available & (gnl|cdd|72120 : 244.0) no description available & (reliability: 2708.0) & (original description: Putative emb2411, Description = Embryo defective protein 2411, PFAM = PF13086;PF13086;PF13087;PF08696;PF01930)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_99466-103448' '(at1g08840 : 192.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|72120 : 159.0) no description available & (gnl|cdd|37016 : 142.0) no description available & (reliability: 384.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF08696)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_118326-128773' '(at1g08840 : 336.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 289.0) no description available & (gnl|cdd|31309 : 167.0) no description available & (reliability: 672.0) & (original description: Putative dna2, Description = DNA replication ATP-dependent helicase/nuclease DNA2, PFAM = PF13087)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10041_15798-39654' '(q9lre6|dpod1_orysa : 1003.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 969.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 948.0) no description available & (gnl|cdd|84550 : 447.0) no description available & (reliability: 1938.0) & (original description: Putative DPD1, Description = DNA polymerase, PFAM = PF00136;PF14260)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10144_219119-234567' '(at1g67500 : 1318.0) Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; recovery protein 3 (REV3); CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1). & (gnl|cdd|36186 : 1085.0) no description available & (gnl|cdd|30766 : 361.0) no description available & (q9lre6|dpod1_orysa : 294.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (reliability: 2636.0) & (original description: Putative POLZ1, Description = DNA polymerase, PFAM = PF03104;PF03104;PF14260;PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10331_32777-51750' '(at3g04260 : 1201.0) plastid transcriptionally active 3 (PTAC3); FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: plastid chromosome, nucleus, chloroplast, nucleoid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 11987 Blast hits to 8407 proteins in 477 species: Archae - 24; Bacteria - 285; Metazoa - 3588; Fungi - 1065; Plants - 3982; Viruses - 208; Other Eukaryotes - 2835 (source: NCBI BLink). & (reliability: 2402.0) & (original description: Putative oxer4, Description = DNA-binding protein PTAC3, PFAM = PF02037;PF13812)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10785_185811-194378' '(at1g44900 : 1318.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (gnl|cdd|35698 : 1071.0) no description available & (gnl|cdd|47677 : 666.0) no description available & (q43704|mcm3_maize : 320.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2636.0) & (original description: Putative mcm2, Description = DNA helicase, PFAM = PF14551;PF17207;PF00493;PF12619)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11009_31329-70967' '(at3g09660 : 1022.0) minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|35701 : 736.0) no description available & (gnl|cdd|31434 : 475.0) no description available & (q43704|mcm3_maize : 290.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2044.0) & (original description: Putative MCM8, Description = Probable DNA helicase MCM8, PFAM = PF00493;PF17207)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11084_328752-356044' '(at2g41460 : 522.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31052 : 260.0) no description available & (p51173|apea_dicdi : 223.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (gnl|cdd|36508 : 217.0) no description available & (reliability: 1044.0) & (original description: Putative ARP, Description = DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, PFAM = PF02037;PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11161_127311-193816' '(at1g58060 : 1639.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 901.0) no description available & (gnl|cdd|31829 : 293.0) no description available & (reliability: 3278.0) & (original description: Putative At1g58060, Description = DExH-box ATP-dependent RNA helicase DExH7, chloroplastic, PFAM = PF04408;PF00271;PF00270;PF07717)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11182_45835-50915' '(at1g68290 : 367.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 2 (ENDO 2); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 730 Blast hits to 727 proteins in 207 species: Archae - 0; Bacteria - 188; Metazoa - 0; Fungi - 100; Plants - 121; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|85937 : 336.0) no description available & (reliability: 734.0) & (original description: Putative ENDO2, Description = Endonuclease 2, PFAM = PF02265)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11182_46377-50739' '(at1g68290 : 315.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 2 (ENDO 2); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 730 Blast hits to 727 proteins in 207 species: Archae - 0; Bacteria - 188; Metazoa - 0; Fungi - 100; Plants - 121; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|85937 : 287.0) no description available & (reliability: 630.0) & (original description: Putative ZEN1, Description = Zinnia endonuclease 1, PFAM = PF02265)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11305_153537-157795' '(at5g04050 : 690.0) RNA-directed DNA polymerase (reverse transcriptase); FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1); Has 3089 Blast hits to 3057 proteins in 1086 species: Archae - 3; Bacteria - 2166; Metazoa - 8; Fungi - 43; Plants - 770; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|73157 : 122.0) no description available & (gnl|cdd|39965 : 88.2) no description available & (reliability: 1380.0) & (original description: Putative At5g04050, Description = RNA-directed DNA polymerase (Reverse transcriptase), PFAM = PF00078;PF01348)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11379_139251-145825' '(at5g17690 : 184.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 162.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11417_26730-38035' '(at5g58720 : 313.0) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative Zm.2642, Description = , PFAM = PF01713;PF08590)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11512_142503-148440' '(at2g19480 : 370.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 296.0) no description available & (gnl|cdd|85149 : 264.0) no description available & (reliability: 740.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11688_241488-250030' '(at1g65470 : 471.0) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 1 (FAS1); FUNCTIONS IN: histone binding; INVOLVED IN: in 11 processes; LOCATED IN: chromatin assembly complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043). & (gnl|cdd|39565 : 366.0) no description available & (reliability: 942.0) & (original description: Putative FAS1, Description = Chromatin assembly factor 1 subunit FAS1, PFAM = PF12253)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_95854-161529' '(at1g08260 : 3110.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 2832.0) no description available & (gnl|cdd|71918 : 433.0) no description available & (reliability: 6220.0) & (original description: Putative POL2A, Description = DNA polymerase epsilon catalytic subunit A, PFAM = PF08490;PF03104;PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_95920-150433' '(at1g08260 : 2182.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 1965.0) no description available & (gnl|cdd|71918 : 433.0) no description available & (reliability: 4364.0) & (original description: Putative ABO4, Description = DNA polymerase, PFAM = PF08490;PF00136)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_150632-153225' '(gnl|cdd|37009 : 230.0) no description available & (at1g08260 : 221.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative nimP, Description = DNA polymerase, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12197_325456-330447' '(at1g11800 : 439.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 251.0) no description available & (reliability: 878.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12205_323772-336066' '(at1g29630 : 644.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37729 : 398.0) no description available & (gnl|cdd|29030 : 288.0) no description available & (q75li2|fen1b_orysa : 95.5) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 1288.0) & (original description: Putative EXO1, Description = Exonuclease 1, PFAM = PF00867;PF00752)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12372_99803-105228' '(at1g20920 : 1058.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (gnl|cdd|35555 : 867.0) no description available & (gnl|cdd|30859 : 337.0) no description available & (p46942|db10_nicsy : 310.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2034.0) & (original description: Putative prp5, Description = Putative ATP-dependent RNA helicase DDX46, PFAM = PF00270;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12522_175274-178763' '(at5g46580 : 982.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G16390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1964.0) & (original description: Putative At5g46580, Description = Pentatricopeptide repeat-containing protein At5g46580, chloroplastic, PFAM = PF17177;PF13041;PF13041)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12935_15949-46665' '(at1g20720 : 1043.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20750.1); Has 2863 Blast hits to 2328 proteins in 675 species: Archae - 243; Bacteria - 679; Metazoa - 737; Fungi - 397; Plants - 210; Viruses - 5; Other Eukaryotes - 592 (source: NCBI BLink). & (gnl|cdd|36347 : 646.0) no description available & (gnl|cdd|31392 : 228.0) no description available & (reliability: 2086.0) & (original description: Putative glysoja_040274, Description = Fanconi anemia group J protein like, PFAM = PF13307;PF06733)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12967_117682-135551' '(at3g53110 : 588.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 472.0) no description available & (gnl|cdd|30859 : 264.0) no description available & (p41380|if4a3_nicpl : 207.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1176.0) & (original description: Putative RH38, Description = DEAD-box ATP-dependent RNA helicase 38, PFAM = PF00271;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13167_233969-241988' '(at5g44635 : 1223.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35701 : 764.0) no description available & (gnl|cdd|47677 : 598.0) no description available & (q43704|mcm3_maize : 277.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2446.0) & (original description: Putative mcm6, Description = DNA helicase, PFAM = PF17207;PF00493;PF14551)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13231_292100-307480' '(at5g16850 : 568.0) Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. TERT shows Class II telomerase activity in vitro, indicating that it can initiate de novo telomerase synthesis on non-telomeric DNA, often using a preferred position within the telomerase-bound RNA.; telomerase reverse transcriptase (TERT); FUNCTIONS IN: telomerase activity, telomeric template RNA reverse transcriptase activity; INVOLVED IN: nucleolus organization, telomere maintenance via telomerase, chromosome organization, chromosome localization; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Telomere reverse transcriptase (InterPro:IPR003545), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477), Telomerase ribonucleoprotein complex - RNA-binding domain (InterPro:IPR021891); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lkw0|tert_orysa : 483.0) Telomerase reverse transcriptase (EC 2.7.7.49) (OsTERT) - Oryza sativa (Rice) & (gnl|cdd|36223 : 316.0) no description available & (gnl|cdd|73155 : 83.8) no description available & (reliability: 1136.0) & (original description: Putative TERT, Description = Telomerase reverse transcriptase, PFAM = PF12009;PF00078)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13254_41656-47365' '(at5g17780 : 385.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 185.0) no description available & (gnl|cdd|84863 : 90.2) no description available & (reliability: 768.0) & (original description: Putative At5g17780, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13601_43974-78447' '(at2g01130 : 1509.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 963.0) no description available & (gnl|cdd|83738 : 325.0) no description available & (reliability: 3018.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF00271;PF07717;PF04408;PF00270)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13601_44210-67615' '(at2g01130 : 1176.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 868.0) no description available & (gnl|cdd|83738 : 310.0) no description available & (reliability: 2352.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF04408;PF07717)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13679_2875-10876' '(at5g65090 : 590.0) Encodes a protein involved in root hair morphogenesis and tip growth. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but, apparently, is not required for normal subsequent tip growth.; BRISTLED 1 (BST1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: root epidermal cell differentiation, root hair cell differentiation, cell tip growth; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G04980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35786 : 237.0) no description available & (gnl|cdd|47467 : 202.0) no description available & (reliability: 1180.0) & (original description: Putative IP5P5, Description = Type I inositol polyphosphate 5-phosphatase 5, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13695_206003-213375' '(at5g41880 : 610.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|38062 : 441.0) no description available & (gnl|cdd|80310 : 218.0) no description available & (reliability: 1220.0) & (original description: Putative Prim1, Description = DNA primase small subunit, PFAM = PF01896)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14009_155760-159574' '(at1g12700 : 398.0) ATP binding;nucleic acid binding;helicases; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 84744 Blast hits to 32036 proteins in 2584 species: Archae - 123; Bacteria - 11324; Metazoa - 2691; Fungi - 2451; Plants - 63733; Viruses - 4; Other Eukaryotes - 4418 (source: NCBI BLink). & (q76c99|rf1_orysa : 251.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: Putative , Description = DNA repair protein XRCC4, C-terminal, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14295_1405-19323' '(at5g16270 : 328.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 207.0) no description available & (gnl|cdd|68400 : 153.0) no description available & (reliability: 656.0) & (original description: Putative rec8, Description = Double-strand-break repair protein rad21-like protein, PFAM = PF04824;PF04825)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14781_52162-56552' '(at2g01900 : 416.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 259.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 832.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf15579_82325-86666' '(at2g37440 : 325.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 244.0) no description available & (gnl|cdd|47467 : 207.0) no description available & (reliability: 650.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf16733_162465-186776' '(at5g08110 : 1093.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (gnl|cdd|39353 : 708.0) no description available & (gnl|cdd|31398 : 533.0) no description available & (reliability: 2186.0) & (original description: Putative BnaA10g23250D, Description = BnaA10g23250D protein, PFAM = PF00270;PF09369;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf17442_21242-45682' '(at3g10690 : 1281.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (q7xzf7|gyra_orysa : 1234.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81634 : 1072.0) no description available & (gnl|cdd|35576 : 467.0) no description available & (reliability: 2562.0) & (original description: Putative GYRA, Description = DNA gyrase subunit A, chloroplastic/mitochondrial, PFAM = PF03989;PF03989;PF03989;PF03989;PF03989;PF03989;PF00521)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf17730_2564-26533' '(at2g30800 : 1301.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 465.0) no description available & (gnl|cdd|31829 : 274.0) no description available & (reliability: 2602.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF00271;PF01424)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf18951_88442-101993' '(at1g67630 : 705.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 438.0) no description available & (gnl|cdd|34811 : 213.0) no description available & (reliability: 1410.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = PF04042;PF08418)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf18951_99492-101752' '(at1g67630 : 124.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 88.9) no description available & (reliability: 248.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = )' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf19872_34957-45449' '(at3g27730 : 1402.0) DNA helicase required for interference-sensitive meiotic crossover events.; ROCK-N-ROLLERS (RCK); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT5G61140.2); Has 10425 Blast hits to 9108 proteins in 1594 species: Archae - 861; Bacteria - 4193; Metazoa - 1363; Fungi - 1417; Plants - 555; Viruses - 24; Other Eukaryotes - 2012 (source: NCBI BLink). & (gnl|cdd|36170 : 781.0) no description available & (gnl|cdd|31397 : 326.0) no description available & (reliability: 2804.0) & (original description: Putative MER3, Description = DExH-box ATP-dependent RNA helicase DExH17, PFAM = PF00270;PF02889;PF00271)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf19975_198035-216841' '(at1g08130 : 968.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (gnl|cdd|36185 : 924.0) no description available & (gnl|cdd|80824 : 458.0) no description available & (reliability: 1936.0) & (original description: Putative LIG1, Description = DNA ligase 1, PFAM = PF01068;PF04675;PF04679)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf20773_135035-146659' '(at5g62410 : 1414.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (gnl|cdd|36151 : 1315.0) no description available & (gnl|cdd|31389 : 497.0) no description available & (reliability: 2828.0) & (original description: Putative cape, Description = Structural maintenance of chromosomes protein 2, PFAM = PF02463;PF02463;PF06470)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf23998_124384-133920' '(at2g43900 : 1401.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 221.0) no description available & (reliability: 2802.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf24082_52264-56544' '(at3g50390 : 226.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 120.0) no description available & (gnl|cdd|35487 : 81.4) no description available & (reliability: 428.0) & (original description: Putative PGSC0003DMG400026464, Description = F-box and wd40 domain protein, putative, PFAM = PF11715;PF00400;PF00400)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf25633_70475-87017' '(gnl|cdd|30860 : 523.0) no description available & (gnl|cdd|35572 : 419.0) no description available & (at1g60930 : 313.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF00271;PF00570;PF14493;PF00270;PF09382;PF16124)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf27283_13359-15454' '(at1g12700 : 155.0) ATP binding;nucleic acid binding;helicases; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 84744 Blast hits to 32036 proteins in 2584 species: Archae - 123; Bacteria - 11324; Metazoa - 2691; Fungi - 2451; Plants - 63733; Viruses - 4; Other Eukaryotes - 4418 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 310.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535)' T
'28.1' 'DNA.synthesis/chromatin structure' 'niben101scf32851_68331-84629' '(at5g06310 : 311.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 179.0) no description available & (gnl|cdd|72969 : 113.0) no description available & (reliability: 590.0) & (original description: Putative POT1B, Description = Protection of telomeres protein 1b, PFAM = PF16686;PF02765)' T
'28.1.1' 'DNA.synthesis/chromatin structure.retrotransposon/transposase' '' ''
'28.1.1.1' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.gypsy-like retrotransposon' '' ''
'28.1.1.2' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.non-LTR retrotransposon' '' ''
'28.1.1.3' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.copia-like retrotransposon' '' ''
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold14467_19812-22139' '(at1g19260 : 82.4) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative Os12g0528500, Description = Os12g0528500 protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold45542_8981-11796' '(at1g19260 : 230.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold51492_9268-11756' '(at4g09660 : 109.0) CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold52973_7711-10956' '(at5g33406 : 245.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BnaA08g29420D, Description = BnaA08g29420D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold65538_295-2937' '(at5g33406 : 108.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold65769_7705-10348' '(at5g33406 : 161.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = Putative transposase, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold75927_1704-7783' '(at1g18560 : 812.0) BED zinc finger ;hAT family dimerisation domain; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT3G42170.1); Has 1077 Blast hits to 1005 proteins in 94 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 210; Plants - 602; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36337 : 264.0) no description available & (p08770|tra1_maize : 134.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 1624.0) & (original description: Putative BnaA09g44510D, Description = BnaA09g44510D protein, PFAM = PF05699;PF14372;PF02892)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold110042_1-2514' '(at5g33406 : 140.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold118789_1-2258' '(at1g19260 : 246.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold128885_1-1706' '(at5g33406 : 94.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold198757_1-512' '(at5g33406 : 149.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At5g33406, Description = BnaA05g17040D protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold78_647276-649764' '(at1g19260 : 126.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold469_347070-349979' '(at5g33406 : 165.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1190_362455-365204' '(at5g33406 : 151.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1255_161131-163553' '(at1g19260 : 113.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1287_13067-16182' '(at1g19260 : 175.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold3624_223535-226730' '(at5g33406 : 123.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative Os05g0414501, Description = Os05g0414501 protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold4287_60052-64008' '(at5g33406 : 340.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|68508 : 141.0) no description available & (reliability: 680.0) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF05699;PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold5068_156223-160276' '(at5g33406 : 410.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|68508 : 150.0) no description available & (reliability: 820.0) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF05699;PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold10479_4532-7156' '(at5g33406 : 177.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaC06g16970D, Description = BnaC06g16970D protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold28858_1-1106' '(at5g33406 : 115.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At5g33406, Description = BnaA01g28240D protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00000710ctg000_793-3503' '(at3g29765 : 196.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00001101ctg003_1-1846' '(at5g33406 : 109.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Os05g0414501, Description = Os05g0414501 protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00004833ctg008_2353-5460' '(at1g19260 : 170.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00004928ctg000_5628-7184' '(at5g33406 : 95.1) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00006011ctg025_7480-10122' '(at5g33406 : 108.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00008873ctg007_269-2942' '(at5g33406 : 89.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00010129ctg002_25337-27675' '(at1g19260 : 94.4) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative Os05g0233900, Description = Os05g0233900 protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00012812ctg004_11594-14174' '(at5g33406 : 119.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400008198, Description = DNA binding protein, putative, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00015177ctg016_856-3382' '(at1g19260 : 135.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At1g19260, Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00021368ctg004_1-1474' '(at1g19260 : 145.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00023548ctg000_377-3102' '(at5g33406 : 139.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaC06g16970D, Description = BnaC06g16970D protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00029274ctg003_9316-12671' '(at5g33406 : 252.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00031674ctg002_1028-3661' '(at5g33406 : 159.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400008198, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00040152ctg005_1-561' '(at5g33406 : 114.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00113_461506-464042' '(at3g29765 : 198.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00149_597262-600915' '(at3g13020 : 419.0) hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13030.3); Has 668 Blast hits to 634 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 657; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68508 : 180.0) no description available & (reliability: 838.0) & (original description: Putative At3g13030, Description = AT3G13030 protein, PFAM = PF05699;PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00247_275131-286820' '(at1g19260 : 201.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PGSC0003DMG400002338, Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00613_434285-438435' '(at3g13020 : 408.0) hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13030.3); Has 668 Blast hits to 634 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 657; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68508 : 181.0) no description available & (reliability: 816.0) & (original description: Putative At3g13030, Description = AT3G13030 protein, PFAM = PF04937;PF02892;PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00725_750965-757044' '(at1g18560 : 825.0) BED zinc finger ;hAT family dimerisation domain; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT3G42170.1); Has 1077 Blast hits to 1005 proteins in 94 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 210; Plants - 602; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36337 : 261.0) no description available & (p08770|tra1_maize : 134.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 1650.0) & (original description: Putative BnaA09g44510D, Description = BnaA09g44510D protein, PFAM = PF05699;PF14372;PF02892)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00878_108116-110741' '(at1g19260 : 130.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02386_41044-43798' '(at5g33406 : 89.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02668_42731-45627' '(at5g33406 : 301.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative Sb02g028966, Description = Putative uncharacterized protein Sb02g028966, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02668_42980-46332' '(at3g22220 : 250.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 153.0) no description available & (reliability: 464.0) & (original description: Putative Sb08g005613, Description = Putative uncharacterized protein Sb08g005613, PFAM = PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf03576_141773-144390' '(at5g33406 : 176.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf03810_834015-836802' '(at5g33406 : 106.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At5g33406, Description = HAT family dimerization domain-containing protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf04549_982837-985726' '(at1g19260 : 249.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf04697_191659-193541' '(at5g33406 : 288.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative Sb02g028966, Description = Putative uncharacterized protein Sb02g028966, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf06809_144113-146559' '(at4g09660 : 100.0) CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400002338, Description = H1005F08.16 protein, PFAM = )' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf08610_10210-19772' '(gnl|cdd|68508 : 113.0) no description available & (at5g33406 : 107.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC02g22000D, Description = BnaC02g22000D protein, PFAM = PF04937)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf09116_196562-199377' '(at1g19260 : 222.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf10735_18677-21919' '(at5g33406 : 239.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T
'28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf28395_58066-60890' '(at1g19260 : 91.3) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative)' T
'28.1.1.5' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.CACTA-like transposase' '' ''
'28.1.1.6' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.Mariner-like transposase' '' ''
'28.1.1.7' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.mutator-like transposase' '' ''
'28.1.1.8' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.ac-like transposase' '' ''
'28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf02831_270526-279565' '(at1g17520 : 181.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative myb5, Description = Histone H1, PFAM = PF00249;PF00538)' T
'28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf09170_151921-162244' '(at1g17520 : 183.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249;PF00538)' T
'28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf26781_1-6641' '(at1g17520 : 191.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative myb68, Description = MYB-related protein, PFAM = PF00538;PF13921)' T
'28.1.3.1' 'DNA.synthesis/chromatin structure.histone.H1' 'niben101scf03735_637575-640441' '(at2g18050 : 80.1) encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.; histone H1-3 (HIS1-3); FUNCTIONS IN: DNA binding, nucleosomal DNA binding; INVOLVED IN: response to water deprivation, nucleosome assembly, response to abscisic acid stimulus; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT2G30620.1); Has 1479 Blast hits to 1252 proteins in 183 species: Archae - 0; Bacteria - 2; Metazoa - 726; Fungi - 41; Plants - 482; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative H1d, Description = Histone H1D, PFAM = PF00538)' T
'28.1.3.2' 'DNA.synthesis/chromatin structure.histone.core' '' ''
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.3scaffold20138_9241-12077' '(gnl|cdd|36955 : 111.0) no description available & (gnl|cdd|47734 : 108.0) no description available & (at1g08170 : 105.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 202.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.3scaffold111879_1-2116' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at3g45980 : 164.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.; HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275; Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 137.0) no description available & (reliability: 328.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.5scaffold88_949484-1075258' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.5scaffold8515_5000-7473' '(o65759|h2ax_cicar : 177.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|28955 : 174.0) no description available & (gnl|cdd|36967 : 171.0) no description available & (at1g08880 : 169.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00000678ctg002_4717-76363' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00007991ctg022_5611-7831' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00046907ctg000_191-2619' '(gnl|cdd|28955 : 175.0) no description available & (o65759|h2ax_cicar : 174.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36967 : 171.0) no description available & (at1g08880 : 167.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101ctg16374_1985-5107' '(gnl|cdd|36967 : 175.0) no description available & (gnl|cdd|28955 : 173.0) no description available & (at5g54640 : 140.0) Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein.; RESISTANT TO AGROBACTERIUM TRANSFORMATION 5 (RAT5); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, response to bacterium, response to wounding; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 2 (TAIR:AT4G27230.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q84nj4|h2a3_orysa : 135.0) Probable histone H2A.3 - Oryza sativa (Rice) & (reliability: 280.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00104_293319-305284' '(gnl|cdd|36968 : 191.0) no description available & (q8h7y8|h2av1_orysa : 187.0) Probable histone H2A variant 1 - Oryza sativa (Rice) & (at3g54560 : 185.0) Encodes HTA11, a histone H2A protein.; histone H2A 11 (HTA11); FUNCTIONS IN: DNA binding; INVOLVED IN: flower development, detection of temperature stimulus, defense response to bacterium; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 8 (TAIR:AT2G38810.2); Has 3864 Blast hits to 3859 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2525; Fungi - 296; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|28955 : 146.0) no description available & (reliability: 370.0) & (original description: Putative H2AV, Description = Histone H2A variant 1, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00223_422362-425026' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 163.0) no description available & (q2hu68|h2a1_medtr : 157.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 152.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 304.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00247_325365-327882' '(gnl|cdd|28955 : 170.0) no description available & (gnl|cdd|36967 : 167.0) no description available & (q2qpg9|h2axb_orysa : 141.0) Probable histone H2AXb - Oryza sativa (Rice) & (at1g08880 : 139.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00369_326338-328873' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 157.0) no description available & (q2hu65|h2a2_medtr : 143.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g59870 : 139.0) Encodes HTA6, a histone H2A protein.; histone H2A 6 (HTA6); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 12 (TAIR:AT5G02560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative h2afx, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00436_1078786-1081226' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 136.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00582_201203-204447' '(gnl|cdd|28955 : 169.0) no description available & (gnl|cdd|36967 : 163.0) no description available & (q2hu65|h2a2_medtr : 124.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g02560 : 119.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 238.0) & (original description: Putative HTA1, Description = Histone H2AX, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00858_5014-7540' '(gnl|cdd|36967 : 176.0) no description available & (gnl|cdd|28955 : 174.0) no description available & (at1g51060 : 159.0) Encodes HTA10, a histone H2A protein.; histone H2A 10 (HTA10); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 13 (TAIR:AT3G20670.1); Has 3904 Blast hits to 3899 proteins in 361 species: Archae - 0; Bacteria - 0; Metazoa - 2554; Fungi - 302; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (q43312|h2a7_wheat : 149.0) Protein H2A.7 (wcH2A-4) (wcH2A-10) - Triticum aestivum (Wheat) & (reliability: 318.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01372_957195-960460' '(gnl|cdd|36967 : 178.0) no description available & (gnl|cdd|28955 : 171.0) no description available & (o65759|h2ax_cicar : 157.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (at1g54690 : 154.0) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; gamma histone variant H2AX (GAMMA-H2AX); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G08880.1); Has 3932 Blast hits to 3927 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 2549; Fungi - 335; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01464_3859-6296' '(q1su99|h2b3_medtr : 159.0) Probable histone H2B.3 - Medicago truncatula (Barrel medic) & (at5g59910 : 154.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 306.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01579_223755-226177' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01866_25751-28393' '(gnl|cdd|28955 : 171.0) no description available & (gnl|cdd|36967 : 165.0) no description available & (q2hu65|h2a2_medtr : 152.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g02560 : 142.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 284.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf02182_238538-259425' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf02182_325394-327834' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf03277_309905-315000' '(gnl|cdd|28955 : 171.0) no description available & (gnl|cdd|36967 : 160.0) no description available & (q2hu68|h2a1_medtr : 146.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 142.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 284.0) & (original description: Putative A34, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf03923_1516850-1521056' '(q84mp7|h2av3_orysa : 188.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (at2g38810 : 185.0) Encodes HTA8, a histone H2A protein.; histone H2A 8 (HTA8); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of flower development; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3868 Blast hits to 3863 proteins in 325 species: Archae - 0; Bacteria - 0; Metazoa - 2531; Fungi - 294; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|36968 : 184.0) no description available & (gnl|cdd|28955 : 146.0) no description available & (reliability: 370.0) & (original description: Putative H2AFZ, Description = Histone H2A.Z, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf05506_36613-39056' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf05962_465504-468909' '(gnl|cdd|36967 : 178.0) no description available & (gnl|cdd|28955 : 172.0) no description available & (o65759|h2ax_cicar : 156.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (at1g54690 : 153.0) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; gamma histone variant H2AX (GAMMA-H2AX); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G08880.1); Has 3932 Blast hits to 3927 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 2549; Fungi - 335; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf06245_249805-252242' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf06332_23232-26058' '(gnl|cdd|36967 : 174.0) no description available & (gnl|cdd|28955 : 173.0) no description available & (at3g20670 : 156.0) Encodes HTA13, a histone H2A protein.; histone H2A 13 (HTA13); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 10 (TAIR:AT1G51060.1); Has 3900 Blast hits to 3895 proteins in 360 species: Archae - 0; Bacteria - 0; Metazoa - 2556; Fungi - 297; Plants - 612; Viruses - 4; Other Eukaryotes - 431 (source: NCBI BLink). & (q43312|h2a7_wheat : 149.0) Protein H2A.7 (wcH2A-4) (wcH2A-10) - Triticum aestivum (Wheat) & (reliability: 312.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf07091_258376-261209' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 108.0) no description available & (gnl|cdd|47734 : 107.0) no description available & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 202.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf07152_440726-443160' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 136.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf08328_87347-93006' '(at1g52740 : 190.0) Encodes HTA9, a histone H2A protein.; histone H2A protein 9 (HTA9); FUNCTIONS IN: DNA binding; INVOLVED IN: detection of temperature stimulus, defense response to bacterium, regulation of flower development; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3910 Blast hits to 3905 proteins in 353 species: Archae - 0; Bacteria - 0; Metazoa - 2573; Fungi - 292; Plants - 612; Viruses - 4; Other Eukaryotes - 429 (source: NCBI BLink). & (q84mp7|h2av3_orysa : 186.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (gnl|cdd|36968 : 186.0) no description available & (gnl|cdd|28955 : 154.0) no description available & (reliability: 380.0) & (original description: Putative h2A, Description = Histone H2A, PFAM = PF16211;PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf09876_18609-21151' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 159.0) no description available & (q2hu68|h2a1_medtr : 141.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g27670 : 137.0) Encodes HTA7, a histone H2A protein.; histone H2A 7 (HTA7); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf16416_1-1664' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g59910 : 162.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 138.0) no description available & (reliability: 312.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf22060_41802-44329' '(o65759|h2ax_cicar : 173.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|28955 : 173.0) no description available & (gnl|cdd|36967 : 170.0) no description available & (at1g08880 : 166.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.3scaffold20138_9241-12077' '(gnl|cdd|36955 : 111.0) no description available & (gnl|cdd|47734 : 108.0) no description available & (at1g08170 : 105.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 210.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.3scaffold111879_1-2116' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at3g45980 : 164.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.; HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275; Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 137.0) no description available & (reliability: 324.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.5scaffold88_949484-1075258' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00000678ctg002_4717-76363' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00007991ctg022_5611-7831' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00039215ctg018_7414-9905' '(at1g08170 : 119.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 113.0) no description available & (p54347|h2b4_chlre : 103.0) Histone H2B.4 (H2B-IV) - Chlamydomonas reinhardtii & (gnl|cdd|47734 : 103.0) no description available & (reliability: 238.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf00436_1078786-1081226' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 136.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf01464_3859-6296' '(q1su99|h2b3_medtr : 159.0) Probable histone H2B.3 - Medicago truncatula (Barrel medic) & (at5g59910 : 154.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 308.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf01579_223755-226177' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf02182_238538-259425' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf02182_325394-327834' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf05506_36613-39056' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf06245_249805-252242' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf07091_258376-261209' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 108.0) no description available & (gnl|cdd|47734 : 107.0) no description available & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 216.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf07152_440726-443160' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 136.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf08570_422020-436390' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 103.0) no description available & (gnl|cdd|47734 : 98.9) no description available & (o22582|h2b_goshi : 94.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (reliability: 216.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf16416_1-1664' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g59910 : 162.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 138.0) no description available & (reliability: 324.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben044scf00007322ctg000_133-2576' '(gnl|cdd|36956 : 202.0) no description available & (at4g40030 : 195.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 187.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|47735 : 153.0) no description available & (reliability: 390.0) & (original description: Putative HTR2, Description = Histone H3.2, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf00528_86464-89036' '(gnl|cdd|36956 : 212.0) no description available & (at4g40030 : 205.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p69248|h32_petcr : 199.0) Histone H3.2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (gnl|cdd|47735 : 161.0) no description available & (reliability: 410.0) & (original description: Putative h3, Description = Histone H3, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf00528_107304-109803' '(at4g40030 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 100.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|36956 : 83.0) no description available & (reliability: 216.0) & (original description: Putative H3, Description = Histone H3, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf01094_110332-115260' '(gnl|cdd|36956 : 244.0) no description available & (at5g65360 : 231.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p69248|h32_petcr : 228.0) Histone H3.2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (gnl|cdd|47735 : 180.0) no description available & (reliability: 462.0) & (original description: Putative h3, Description = Histone H3, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf01397_85164-87868' '(at4g40030 : 225.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (q71h73|h33_vitvi : 213.0) Histone H3.3 - Vitis vinifera (Grape) & (gnl|cdd|36956 : 198.0) no description available & (gnl|cdd|47735 : 153.0) no description available & (reliability: 450.0) & (original description: Putative HTR4, Description = Histone H3.3, PFAM = PF00125)' T
'28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf09523_173122-175565' '(gnl|cdd|36956 : 201.0) no description available & (at4g40030 : 193.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 186.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|47735 : 153.0) no description available & (reliability: 386.0) & (original description: Putative HTR2, Description = Histone H3.2, PFAM = PF00125)' T
'28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'nbv0.3scaffold19788_18096-20404' '(at5g59970 : 117.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 117.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|38677 : 113.0) no description available & (gnl|cdd|28957 : 103.0) no description available & (reliability: 234.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T
'28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101ctg14707_1-1466' '(gnl|cdd|38677 : 148.0) no description available & (at5g59970 : 135.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 135.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 123.0) no description available & (reliability: 270.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T
'28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf05373_260117-262425' '(gnl|cdd|38677 : 149.0) no description available & (at5g59970 : 135.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 135.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 122.0) no description available & (reliability: 270.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T
'28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf16416_232721-244349' '(gnl|cdd|38677 : 148.0) no description available & (at5g59970 : 134.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 134.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 122.0) no description available & (reliability: 268.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511;PF15511)' T
'28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf23814_63707-70755' '(gnl|cdd|38677 : 149.0) no description available & (at5g59970 : 137.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 136.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 123.0) no description available & (reliability: 274.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511;PF15511)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold1441_66713-78447' '(at3g28030 : 834.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 258.0) no description available & (gnl|cdd|29030 : 182.0) no description available & (reliability: 1668.0) & (original description: Putative xpg, Description = DNA repair protein complementing XP-G cells, PFAM = PF00867;PF00752)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold1788_2766-13847' '(at4g31150 : 219.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39618 : 173.0) no description available & (gnl|cdd|68078 : 132.0) no description available & (reliability: 438.0) & (original description: Putative nfi, Description = Endonuclease V, PFAM = PF04493)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold2443_44156-46797' '(at3g14890 : 114.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 99.9) no description available & (reliability: 228.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide phosphatase/kinase, PFAM = PF08645)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold3911_32933-44155' '(at5g04560 : 338.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 636.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold6460_41832-59657' '(at5g54090 : 688.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT1G65070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80654 : 408.0) no description available & (gnl|cdd|35439 : 109.0) no description available & (reliability: 1376.0) & (original description: Putative mutS2, Description = MutS2 protein, PFAM = PF00488)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold7871_35093-54617' '(at4g35520 : 399.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 277.0) no description available & (gnl|cdd|30671 : 213.0) no description available & (reliability: 798.0) & (original description: Putative MLH3, Description = DNA mismatch repair protein mutL, PFAM = PF01119;PF13589;PF08676)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold8122_11869-19442' '(at3g14890 : 179.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide, PFAM = PF00645)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold8480_38353-53233' '(at5g64520 : 244.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 203.0) no description available & (reliability: 488.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2 homolog, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.3scaffold10705_6540-13428' '(at1g79650 : 439.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 371.0) no description available & (q40742|rad23_orysa : 300.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 102.0) no description available & (reliability: 878.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold11029_13501-26692' '(at1g19485 : 570.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1140.0) & (original description: Putative BnaC08g18840D, Description = BnaC08g18840D protein, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.3scaffold12008_2699-18966' '(at2g24420 : 325.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative PGSC0003DMG400014854, Description = DNA repair ATPase-related family protein, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.3scaffold12551_1008-20813' '(at3g24320 : 1431.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 594.0) no description available & (gnl|cdd|73002 : 211.0) no description available & (reliability: 2862.0) & (original description: Putative MSH1, Description = DNA mismatch repair protein MSH1, mitochondrial, PFAM = PF00488;PF01624)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold13883_31234-40750' '(at3g20475 : 340.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 231.0) no description available & (gnl|cdd|73040 : 220.0) no description available & (reliability: 680.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = PF00488)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold14321_8897-18716' '(at2g28560 : 461.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 165.0) no description available & (gnl|cdd|36646 : 164.0) no description available & (reliability: 922.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold18186_13907-27820' '(at1g07745 : 317.0) Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.; homolog of RAD51 D (RAD51D); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA repair, somatic cell DNA recombination, regulation of response to biotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT2G28560.1); Has 4124 Blast hits to 4124 proteins in 1258 species: Archae - 446; Bacteria - 1629; Metazoa - 719; Fungi - 404; Plants - 385; Viruses - 2; Other Eukaryotes - 539 (source: NCBI BLink). & (gnl|cdd|29989 : 113.0) no description available & (gnl|cdd|36646 : 92.0) no description available & (reliability: 634.0) & (original description: Putative RAD51D, Description = DNA repair protein RAD51 homolog 4, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold19169_2361-13156' '(at2g28560 : 429.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 158.0) no description available & (gnl|cdd|36646 : 148.0) no description available & (reliability: 858.0) & (original description: Putative RAD51B, Description = AtRAD51B, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold21123_1-13924' '(at5g04560 : 694.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1374.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold23547_13560-17782' '(at5g41370 : 1147.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1051.0) no description available & (gnl|cdd|31261 : 265.0) no description available & (reliability: 2294.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF13625;PF16203;PF04851)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold28418_3463-14364' '(at2g24420 : 379.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.3scaffold30153_6480-21567' '(at5g50340 : 629.0) ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink). & (gnl|cdd|83993 : 520.0) no description available & (reliability: 1258.0) & (original description: Putative sms, Description = DNA repair protein RadA, PFAM = PF13541;PF13481)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold31287_7920-12941' '(at1g79650 : 423.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 372.0) no description available & (q40742|rad23_orysa : 289.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 107.0) no description available & (reliability: 846.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold42920_1926-18083' '(at3g24495 : 1188.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|81564 : 417.0) no description available & (gnl|cdd|35438 : 290.0) no description available & (q9xgc9|msh2_maize : 163.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2376.0) & (original description: Putative MSH7, Description = DNA mismatch repair protein MSH7, PFAM = PF01624;PF05192;PF00488)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold42920_6709-13220' '(at3g24495 : 386.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 124.0) no description available & (gnl|cdd|30598 : 92.3) no description available & (reliability: 772.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF05188)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold43919_7190-17357' '(at5g54260 : 956.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 693.0) no description available & (gnl|cdd|67753 : 232.0) no description available & (reliability: 1912.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF04152;PF00149)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold43929_14225-17079' '(gnl|cdd|37207 : 185.0) no description available & (at1g30480 : 179.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative RSN2, Description = DNA-damage-repair/toleration protein DRT111, PFAM = PF01585)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold53212_1-14043' '(at5g48120 : 721.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 400.0) no description available & (reliability: 1442.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF12460;PF14500)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold53212_751-9169' '(at5g48120 : 329.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 201.0) no description available & (reliability: 658.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold61458_3068-10752' '(at1g16970 : 170.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF03731)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold72288_861-8662' '(at4g02460 : 432.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (gnl|cdd|37189 : 285.0) no description available & (gnl|cdd|30671 : 207.0) no description available & (reliability: 864.0) & (original description: Putative pms2, Description = Mismatch repair endonuclease PMS2, PFAM = PF01119;PF13589)' T
'28.2' 'DNA.repair' 'nbv0.3scaffold89668_2482-5491' '(at5g44680 : 370.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 232.0) no description available & (reliability: 740.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold206_946400-974087' '(at1g79650 : 169.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 169.0) no description available & (q40742|rad23_orysa : 106.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 99.5) no description available & (reliability: 338.0) & (original description: Putative RAD23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00240)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold584_211646-238605' '(at5g04130 : 649.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 615.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 606.0) no description available & (gnl|cdd|35576 : 360.0) no description available & (reliability: 1270.0) & (original description: Putative gyrB, Description = DNA gyrase subunit B, PFAM = PF00204;PF02518)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold733_386890-396709' '(at2g28560 : 485.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 168.0) no description available & (gnl|cdd|36646 : 165.0) no description available & (reliability: 970.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold1476_397249-414700' '(at5g44740 : 558.0) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|37306 : 408.0) no description available & (gnl|cdd|73283 : 302.0) no description available & (reliability: 1116.0) & (original description: Putative POLH, Description = DNA polymerase eta, PFAM = PF00817;PF11799)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold1657_22557-46026' '(at5g48120 : 732.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 422.0) no description available & (reliability: 1464.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF12460;PF14500)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold1746_57779-69039' '(at1g49980 : 744.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 575.0) no description available & (gnl|cdd|48491 : 365.0) no description available & (reliability: 1488.0) & (original description: Putative POLK, Description = DNA-directed polymerase kappa, PFAM = PF11799;PF00817;PF11798)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold2321_142570-169235' '(at3g14890 : 378.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 180.0) no description available & (gnl|cdd|37345 : 124.0) no description available & (reliability: 756.0) & (original description: Putative Os01g0737300, Description = Os01g0737300 protein, PFAM = PF08645;PF00645)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold2971_223372-231012' '(at1g52500 : 376.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 172.0) no description available & (reliability: 752.0) & (original description: Putative FPG1, Description = Formamidopyrimidine-DNA glycosylase, PFAM = PF06831;PF01149)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold2976_768-12499' '(at1g52500 : 408.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 181.0) no description available & (reliability: 816.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold2988_157306-190253' '(at1g01490 : 89.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At1g01490, Description = Heavy metal-associated domain containing protein, expressed, PFAM = PF00403)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold3533_107861-122932' '(at4g02460 : 877.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (gnl|cdd|37189 : 360.0) no description available & (gnl|cdd|30671 : 281.0) no description available & (reliability: 1754.0) & (original description: Putative PMS1, Description = DNA mismatch repair protein PMS1, PFAM = PF13589;PF01119;PF08676)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold3655_184760-200239' '(at5g64520 : 240.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 201.0) no description available & (reliability: 480.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2 homolog, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.5scaffold5110_32947-44169' '(at5g04560 : 337.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|28938 : 80.7) no description available & (reliability: 636.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 604.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 620.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T
'28.2' 'DNA.repair' 'nbv0.5scaffold6195_25615-38800' '(at1g19485 : 489.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 978.0) & (original description: Putative PGSC0003DMG400008959, Description = Putative general transcription factor 3C polypeptide 2-like, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.5scaffold7738_22027-28281' '(at2g31970 : 549.0) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.; RAD50; FUNCTIONS IN: zinc ion binding, ATP binding, nuclease activity; INVOLVED IN: DNA repair, double-strand break repair, telomere capping, mitotic recombination, telomere maintenance; LOCATED IN: nucleus, Mre11 complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc hook, Rad50 (InterPro:IPR013134), Rad50 zinc hook (InterPro:IPR007517), Recombination/repair protein Rad50 (InterPro:IPR004584); Has 105617 Blast hits to 56308 proteins in 2913 species: Archae - 1820; Bacteria - 19240; Metazoa - 45759; Fungi - 8381; Plants - 4805; Viruses - 470; Other Eukaryotes - 25142 (source: NCBI BLink). & (gnl|cdd|36180 : 365.0) no description available & (gnl|cdd|72999 : 127.0) no description available & (reliability: 1098.0) & (original description: Putative RAD50, Description = RAD50, PFAM = )' T
'28.2' 'DNA.repair' 'nbv0.5scaffold8939_14604-18504' '(at5g44680 : 317.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 188.0) no description available & (reliability: 634.0) & (original description: Putative BnaC06g35890D, Description = BnaC06g35890D protein, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben044scf00000445ctg002_11015-23436' '(at5g16630 : 714.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 351.0) no description available & (gnl|cdd|67450 : 265.0) no description available & (reliability: 1428.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF03835;PF10403;PF01841;PF10404;PF10405)' T
'28.2' 'DNA.repair' 'niben044scf00000729ctg003_8525-11409' '(gnl|cdd|37207 : 183.0) no description available & (at1g30480 : 180.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BnaA09g26060D, Description = BnaA09g26060D protein, PFAM = PF01585)' T
'28.2' 'DNA.repair' 'niben044scf00001181ctg020_18121-22337' '(at3g28030 : 287.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 132.0) no description available & (reliability: 574.0) & (original description: Putative RAD2, Description = DNA-repair protein UVH3, putative, PFAM = )' T
'28.2' 'DNA.repair' 'niben044scf00004197ctg015_1459-5206' '(at1g49980 : 251.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 138.0) no description available & (gnl|cdd|48491 : 90.2) no description available & (reliability: 502.0) & (original description: Putative polk, Description = DNA polymerase kappa, PFAM = PF11799)' T
'28.2' 'DNA.repair' 'niben044scf00004510ctg016_7966-12744' '(at3g20475 : 177.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative MSH5, Description = DNA mismatch repair protein MSH5, PFAM = )' T
'28.2' 'DNA.repair' 'niben044scf00005589ctg002_13468-17306' '(gnl|cdd|38318 : 121.0) no description available & (at2g24490 : 119.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72950 : 84.9) no description available & (reliability: 238.0) & (original description: Putative rfa, Description = Putative Replication protein A 30 kDa subunit, PFAM = PF01336)' T
'28.2' 'DNA.repair' 'niben044scf00005934ctg022_609-8718' '(at5g48120 : 485.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 254.0) no description available & (reliability: 970.0) & (original description: Putative , Description = , PFAM = PF12460;PF14500)' T
'28.2' 'DNA.repair' 'niben044scf00006305ctg003_8214-23027' '(at4g17380 : 1231.0) Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.; MUTS-like protein 4 (MSH4); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, synapsis, meiotic prophase I; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: flower, sporocyte; EXPRESSED DURING: petal differentiation and expansion stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 13303 Blast hits to 13154 proteins in 2712 species: Archae - 169; Bacteria - 9120; Metazoa - 661; Fungi - 837; Plants - 451; Viruses - 3; Other Eukaryotes - 2062 (source: NCBI BLink). & (gnl|cdd|35441 : 600.0) no description available & (gnl|cdd|81564 : 370.0) no description available & (q9xgc9|msh2_maize : 151.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2462.0) & (original description: Putative MSH4, Description = DNA mismatch repair protein MSH4, PFAM = PF05190;PF00488;PF05192)' T
'28.2' 'DNA.repair' 'niben044scf00008003ctg004_1-7017' '(at3g18524 : 1142.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 1048.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (gnl|cdd|35440 : 650.0) no description available & (gnl|cdd|30598 : 431.0) no description available & (reliability: 2284.0) & (original description: Putative msh2, Description = Mismatch repair protein, PFAM = PF05188;PF05192;PF01624;PF05190;PF00488)' T
'28.2' 'DNA.repair' 'niben044scf00008716ctg005_39-9306' '(at3g20475 : 420.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 129.0) no description available & (gnl|cdd|30598 : 113.0) no description available & (reliability: 840.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = PF05192)' T
'28.2' 'DNA.repair' 'niben044scf00010489ctg003_19091-33702' '(at5g04560 : 691.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1376.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'niben044scf00011671ctg002_680-14467' '(at5g54260 : 898.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 647.0) no description available & (gnl|cdd|67753 : 194.0) no description available & (reliability: 1796.0) & (original description: Putative mhm11, Description = Double-strand break repair protein MRE11, PFAM = PF04152;PF00149)' T
'28.2' 'DNA.repair' 'niben044scf00012841ctg004_4570-8769' '(at5g44680 : 354.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 234.0) no description available & (reliability: 708.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben044scf00015619ctg005_1-7290' '(at3g23100 : 103.0) A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein.; homolog of human DNA ligase iv-binding protein XRCC4 (XRCC4); FUNCTIONS IN: protein C-terminus binding; INVOLVED IN: double-strand break repair, DNA recombination, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), DNA double-strand break repair and VJ recombination XRCC4, C-terminal (InterPro:IPR014751), DNA double-strand break repair and VJ recombination XRCC4 (InterPro:IPR010585); BEST Arabidopsis thaliana protein match is: DNA double-strand break repair and VJ recombination XRCC4 (TAIR:AT1G61410.1); Has 189 Blast hits to 182 proteins in 54 species: Archae - 0; Bacteria - 3; Metazoa - 88; Fungi - 4; Plants - 48; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative XRCC4, Description = DNA repair protein XRCC4, PFAM = PF06632)' T
'28.2' 'DNA.repair' 'niben044scf00016609ctg014_18982-23195' '(at4g09140 : 981.0) Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.; MUTL-homologue 1 (MLH1); FUNCTIONS IN: protein binding, bridging; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Mlh1 (InterPro:IPR011186), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 6802 Blast hits to 6727 proteins in 2342 species: Archae - 68; Bacteria - 4480; Metazoa - 469; Fungi - 496; Plants - 114; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|37190 : 756.0) no description available & (gnl|cdd|30671 : 360.0) no description available & (reliability: 1962.0) & (original description: Putative MLH1, Description = DNA mismatch repair protein MLH1, PFAM = PF13589;PF01119;PF16413)' T
'28.2' 'DNA.repair' 'niben044scf00016691ctg011_2985-7634' '(at4g31340 : 84.3) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative PGSC0003DMG400028754, Description = Putative ovule protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben044scf00019467ctg006_1-3169' '(at1g01490 : 95.5) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative TCM_016336, Description = Heavy metal transport/detoxification superfamily protein, putative isoform 2, PFAM = PF00403)' T
'28.2' 'DNA.repair' 'niben044scf00021509ctg008_448-9126' '(at3g24320 : 826.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 332.0) no description available & (gnl|cdd|73002 : 205.0) no description available & (reliability: 1652.0) & (original description: Putative CHM, Description = MSH1, PFAM = PF01541;PF00488)' T
'28.2' 'DNA.repair' 'niben044scf00021759ctg009_13525-26716' '(at1g19485 : 493.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 986.0) & (original description: Putative PGSC0003DMG400008959, Description = Putative general transcription factor 3C polypeptide 2-like, PFAM = )' T
'28.2' 'DNA.repair' 'niben044scf00026015ctg005_3022-8411' '(at5g57970 : 346.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 253.0) no description available & (reliability: 692.0) & (original description: Putative tag, Description = 3-methyl-adenine DNA glycosylase I, constitutive, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben044scf00026735ctg003_666-7269' '(at1g77320 : 509.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 147.0) no description available & (reliability: 1018.0) & (original description: Putative MEI1, Description = DNA topoisomerase 2-binding protein 1-A, PFAM = PF12738;PF12738)' T
'28.2' 'DNA.repair' 'niben044scf00028510ctg007_319-11807' '(at3g02540 : 417.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 359.0) no description available & (q40742|rad23_orysa : 345.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 114.0) no description available & (reliability: 804.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF00627;PF00627;PF00240;PF09280)' T
'28.2' 'DNA.repair' 'niben044scf00029028ctg002_1-2598' '(at1g80420 : 157.0) ATXRCC1; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|38436 : 155.0) no description available & (reliability: 314.0) & (original description: Putative xrcc1, Description = DNA repair protein XRCC1, PFAM = PF00533)' T
'28.2' 'DNA.repair' 'niben044scf00039174ctg004_3066-6199' '(at3g20475 : 237.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 151.0) no description available & (gnl|cdd|81564 : 103.0) no description available & (reliability: 474.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = )' T
'28.2' 'DNA.repair' 'niben044scf00041686ctg010_1-4628' '(at4g29170 : 285.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|67571 : 178.0) no description available & (gnl|cdd|38643 : 171.0) no description available & (reliability: 570.0) & (original description: Putative MND1, Description = Meiotic nuclear division protein 1 homolog, PFAM = PF03962)' T
'28.2' 'DNA.repair' 'niben044scf00042214ctg002_1-7309' '(at4g25290 : 679.0) DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink). & (gnl|cdd|36667 : 135.0) no description available & (gnl|cdd|30941 : 97.1) no description available & (reliability: 1358.0) & (original description: Putative pco082395, Description = Deoxyribodipyrimidine photolyase family protein, PFAM = PF12697;PF00875)' T
'28.2' 'DNA.repair' 'niben044scf00045685ctg005_1540-3872' '(gnl|cdd|37207 : 189.0) no description available & (at1g30480 : 172.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaA09g26060D, Description = BnaA09g26060D protein, PFAM = PF01585)' T
'28.2' 'DNA.repair' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1056.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'28.2' 'DNA.repair' 'niben044scf00048234ctg004_1-2986' '(at5g44680 : 357.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 227.0) no description available & (reliability: 714.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben044scf00053295ctg003_27569-29956' '(gnl|cdd|36220 : 110.0) no description available & (at1g02670 : 108.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT1G05120.1); Has 20658 Blast hits to 14879 proteins in 1788 species: Archae - 141; Bacteria - 6646; Metazoa - 3824; Fungi - 4666; Plants - 1875; Viruses - 121; Other Eukaryotes - 3385 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At1g02670, Description = ATP-dependent helicase rhp16, PFAM = PF00176)' T
'28.2' 'DNA.repair' 'niben044scf00057660ctg000_1-8937' '(at5g48120 : 403.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 224.0) no description available & (reliability: 806.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T
'28.2' 'DNA.repair' 'niben101ctg14912_605-3212' '(at3g24320 : 103.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative CHM, Description = MSH1, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf00146_49274-59562' '(at3g47830 : 320.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|30526 : 108.0) no description available & (reliability: 640.0) & (original description: Putative At3g47830, Description = Putative DNA glycosylase At3g47830, PFAM = PF00730)' T
'28.2' 'DNA.repair' 'niben101scf00212_234088-267828' '(at3g14890 : 378.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 174.0) no description available & (gnl|cdd|37345 : 118.0) no description available & (reliability: 756.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide phosphatase/kinase, PFAM = PF08645;PF00645)' T
'28.2' 'DNA.repair' 'niben101scf00254_917102-929829' '(at5g41370 : 1302.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1126.0) no description available & (gnl|cdd|31261 : 270.0) no description available & (reliability: 2604.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF13625;PF04851;PF16203)' T
'28.2' 'DNA.repair' 'niben101scf00270_1069380-1097763' '(at1g16970 : 826.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|63880 : 244.0) no description available & (gnl|cdd|37538 : 217.0) no description available & (reliability: 1652.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF02735;PF03731;PF02037;PF03730)' T
'28.2' 'DNA.repair' 'niben101scf00293_295761-322299' '(at1g77320 : 907.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 163.0) no description available & (reliability: 1814.0) & (original description: Putative MEI1, Description = Meiosis defective 1, PFAM = PF00533;PF16589;PF12738;PF12738;PF12738)' T
'28.2' 'DNA.repair' 'niben101scf00360_11318-17755' '(at5g24850 : 775.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 741.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|30764 : 347.0) no description available & (gnl|cdd|35355 : 184.0) no description available & (reliability: 1550.0) & (original description: Putative CRYD, Description = Cryptochrome DASH, chloroplastic/mitochondrial, PFAM = PF00875;PF03441)' T
'28.2' 'DNA.repair' 'niben101scf00360_11405-15288' '(at5g24850 : 363.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 347.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|30764 : 118.0) no description available & (reliability: 726.0) & (original description: Putative CRY3, Description = Cryptochrome DASH, chloroplastic/mitochondrial, PFAM = PF00875)' T
'28.2' 'DNA.repair' 'niben101scf00571_662329-680963' '(at5g44740 : 682.0) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|37306 : 429.0) no description available & (gnl|cdd|73283 : 325.0) no description available & (reliability: 1364.0) & (original description: Putative POLH, Description = DNA polymerase eta, PFAM = PF00817;PF11799)' T
'28.2' 'DNA.repair' 'niben101scf00675_430377-437001' '(at3g13226 : 166.0) regulatory protein RecX family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of DNA repair; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulatory protein RecX (InterPro:IPR003783); Has 1697 Blast hits to 1697 proteins in 756 species: Archae - 0; Bacteria - 1482; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (gnl|cdd|80526 : 91.0) no description available & (reliability: 332.0) & (original description: Putative Os04g0667900, Description = Os04g0667900 protein, PFAM = PF02631)' T
'28.2' 'DNA.repair' 'niben101scf00799_149319-156388' '(at1g21710 : 446.0) Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.; 8-oxoguanine-DNA glycosylase 1 (OGG1); FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294), 8-oxoguanine DNA glycosylase, N-terminal (InterPro:IPR012904), HhH-GPD domain (InterPro:IPR003265); Has 951 Blast hits to 936 proteins in 417 species: Archae - 106; Bacteria - 332; Metazoa - 176; Fungi - 163; Plants - 46; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|38086 : 335.0) no description available & (gnl|cdd|30471 : 122.0) no description available & (reliability: 892.0) & (original description: Putative OGG1, Description = N-glycosylase/DNA lyase OGG1, PFAM = PF07934;PF00730)' T
'28.2' 'DNA.repair' 'niben101scf00894_162375-174064' '(at3g02540 : 427.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 360.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 355.0) no description available & (gnl|cdd|29207 : 114.0) no description available & (reliability: 818.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T
'28.2' 'DNA.repair' 'niben101scf01027_110315-113613' '(at1g01490 : 85.1) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative Sb06g032110, Description = Putative uncharacterized protein Sb06g032110, PFAM = PF00403)' T
'28.2' 'DNA.repair' 'niben101scf01116_181327-187039' '(at1g79050 : 599.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink). & (gnl|cdd|82947 : 485.0) no description available & (gnl|cdd|36646 : 184.0) no description available & (reliability: 1198.0) & (original description: Putative RECA, Description = DNA repair protein recA homolog 1, chloroplastic, PFAM = PF00154)' T
'28.2' 'DNA.repair' 'niben101scf01221_319285-340108' '(at3g24320 : 842.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 364.0) no description available & (gnl|cdd|73002 : 120.0) no description available & (reliability: 1684.0) & (original description: Putative CHM, Description = MSH1, PFAM = PF01541;PF01624;PF00488)' T
'28.2' 'DNA.repair' 'niben101scf01266_222333-227727' '(at3g26680 : 562.0) Involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.; SENSITIVE TO NITROGEN MUSTARD 1 (SNM1); FUNCTIONS IN: hydrolase activity; INVOLVED IN: DNA repair, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: sterile alpha motif (SAM) domain-containing protein (TAIR:AT2G45700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36575 : 361.0) no description available & (gnl|cdd|87294 : 109.0) no description available & (reliability: 1124.0) & (original description: Putative SNM1, Description = DNA cross-link repair protein SNM1, PFAM = PF07522)' T
'28.2' 'DNA.repair' 'niben101scf01330_74352-91190' '(at2g24420 : 353.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative PGSC0003DMG400014854, Description = Putative uncharacterized protein At4g31340, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf01374_1146259-1168528' '(at5g48120 : 444.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 261.0) no description available & (reliability: 888.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T
'28.2' 'DNA.repair' 'niben101scf01374_1147250-1158486' '(at5g48120 : 338.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 205.0) no description available & (reliability: 676.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T
'28.2' 'DNA.repair' 'niben101scf01376_296343-299492' '(at1g16970 : 171.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|29231 : 81.9) no description available & (reliability: 342.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF03731)' T
'28.2' 'DNA.repair' 'niben101scf01429_52520-65849' '(at3g02920 : 223.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (gnl|cdd|38318 : 200.0) no description available & (gnl|cdd|34832 : 120.0) no description available & (reliability: 432.0) & (original description: Putative rfa, Description = Putative replication factor A, PFAM = PF08784)' T
'28.2' 'DNA.repair' 'niben101scf01438_435323-442888' '(at2g24490 : 218.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38318 : 185.0) no description available & (gnl|cdd|34832 : 130.0) no description available & (reliability: 436.0) & (original description: Putative RPA2A, Description = Replication protein A 32 kDa subunit A, PFAM = PF01336;PF08784)' T
'28.2' 'DNA.repair' 'niben101scf01438_511143-544026' '(at3g24495 : 762.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 280.0) no description available & (gnl|cdd|73045 : 254.0) no description available & (q9xgc9|msh2_maize : 124.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1524.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF00488;PF05188;PF05192)' T
'28.2' 'DNA.repair' 'niben101scf01438_516310-536127' '(at3g24495 : 382.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 118.0) no description available & (gnl|cdd|30598 : 99.6) no description available & (reliability: 764.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF05188)' T
'28.2' 'DNA.repair' 'niben101scf01606_269829-288861' '(at5g54090 : 716.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT1G65070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80654 : 431.0) no description available & (gnl|cdd|35439 : 109.0) no description available & (reliability: 1432.0) & (original description: Putative mutS2, Description = Endonuclease MutS2, PFAM = PF00488)' T
'28.2' 'DNA.repair' 'niben101scf01655_448950-452709' '(at1g01490 : 94.7) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative Ccrd_008947, Description = Heavy metal-associated domain, HMA, PFAM = PF00403)' T
'28.2' 'DNA.repair' 'niben101scf01740_194841-202751' '(at4g25290 : 698.0) DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink). & (gnl|cdd|36667 : 134.0) no description available & (gnl|cdd|30941 : 96.7) no description available & (reliability: 1396.0) & (original description: Putative pco082395, Description = Deoxyribodipyrimidine photolyase family protein, PFAM = PF00875;PF12697)' T
'28.2' 'DNA.repair' 'niben101scf01779_407505-419087' '(at4g31340 : 354.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf01795_932453-940095' '(at1g19025 : 515.0) DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT1G27410.1); Has 1078 Blast hits to 1060 proteins in 342 species: Archae - 34; Bacteria - 280; Metazoa - 259; Fungi - 220; Plants - 166; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|36575 : 128.0) no description available & (reliability: 1030.0) & (original description: Putative At1g19025, Description = DNA repair metallo-beta-lactamase family protein, PFAM = PF07522)' T
'28.2' 'DNA.repair' 'niben101scf01866_193851-219481' '(at1g07745 : 310.0) Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.; homolog of RAD51 D (RAD51D); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA repair, somatic cell DNA recombination, regulation of response to biotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT2G28560.1); Has 4124 Blast hits to 4124 proteins in 1258 species: Archae - 446; Bacteria - 1629; Metazoa - 719; Fungi - 404; Plants - 385; Viruses - 2; Other Eukaryotes - 539 (source: NCBI BLink). & (gnl|cdd|29989 : 116.0) no description available & (gnl|cdd|36646 : 95.5) no description available & (reliability: 620.0) & (original description: Putative RAD51D, Description = RAD51D splice variant f, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'niben101scf01888_996622-1004075' '(at1g21710 : 443.0) Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.; 8-oxoguanine-DNA glycosylase 1 (OGG1); FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294), 8-oxoguanine DNA glycosylase, N-terminal (InterPro:IPR012904), HhH-GPD domain (InterPro:IPR003265); Has 951 Blast hits to 936 proteins in 417 species: Archae - 106; Bacteria - 332; Metazoa - 176; Fungi - 163; Plants - 46; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|38086 : 334.0) no description available & (gnl|cdd|30471 : 122.0) no description available & (reliability: 886.0) & (original description: Putative ogg1, Description = N-glycosylase/DNA lyase, PFAM = PF00730;PF07934)' T
'28.2' 'DNA.repair' 'niben101scf01927_955143-960740' '(at4g29170 : 288.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|67571 : 178.0) no description available & (gnl|cdd|38643 : 172.0) no description available & (reliability: 576.0) & (original description: Putative MND1, Description = Meiotic nuclear division protein 1 homolog, PFAM = PF03962)' T
'28.2' 'DNA.repair' 'niben101scf01999_671386-675608' '(at5g41370 : 1096.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1025.0) no description available & (gnl|cdd|31261 : 264.0) no description available & (reliability: 2192.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF16203;PF13625;PF04851)' T
'28.2' 'DNA.repair' 'niben101scf02100_19942-23411' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 260.0) no description available & (gnl|cdd|30471 : 161.0) no description available & (reliability: 650.0) & (original description: Putative PHYPADRAFT_217626, Description = Predicted protein, PFAM = PF00730)' T
'28.2' 'DNA.repair' 'niben101scf02123_1089080-1092398' '(at3g20820 : 424.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 148.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 808.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T
'28.2' 'DNA.repair' 'niben101scf02156_184850-200802' '(at5g38470 : 420.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23D (RAD23D); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: response to cold, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), XPC-binding domain (InterPro:IPR015360), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT3G02540.3); Has 11236 Blast hits to 6362 proteins in 878 species: Archae - 4; Bacteria - 655; Metazoa - 4543; Fungi - 1476; Plants - 2522; Viruses - 172; Other Eukaryotes - 1864 (source: NCBI BLink). & (q40742|rad23_orysa : 359.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 355.0) no description available & (gnl|cdd|29207 : 114.0) no description available & (reliability: 840.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF00627;PF00627;PF00240;PF09280)' T
'28.2' 'DNA.repair' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T
'28.2' 'DNA.repair' 'niben101scf02216_144465-149906' '(at3g20820 : 447.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p58823|pgip3_phavu : 140.0) Polygalacturonase inhibitor 3 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35665 : 83.9) no description available & (reliability: 868.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T
'28.2' 'DNA.repair' 'niben101scf02474_291595-299567' '(at1g52500 : 403.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 184.0) no description available & (reliability: 806.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T
'28.2' 'DNA.repair' 'niben101scf02509_1165350-1168453' '(at3g20820 : 437.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 140.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 95.5) no description available & (reliability: 862.0) & (original description: Putative lrr, Description = DNA-damage-repair/toleration protein DRT100, PFAM = PF13855;PF13855;PF08263)' T
'28.2' 'DNA.repair' 'niben101scf02569_329728-337155' '(at1g12370 : 771.0) encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele; photolyase 1 (PHR1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), DNA photolyase, class 2 (InterPro:IPR008148); Has 2452 Blast hits to 2448 proteins in 660 species: Archae - 33; Bacteria - 979; Metazoa - 129; Fungi - 60; Plants - 123; Viruses - 39; Other Eukaryotes - 1089 (source: NCBI BLink). & (gnl|cdd|35355 : 352.0) no description available & (gnl|cdd|86321 : 223.0) no description available & (reliability: 1542.0) & (original description: Putative PHR1, Description = Deoxyribodipyrimidine photo-lyase, PFAM = PF00875)' T
'28.2' 'DNA.repair' 'niben101scf02693_93262-105371' '(at4g02070 : 1344.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (gnl|cdd|35438 : 981.0) no description available & (gnl|cdd|30598 : 542.0) no description available & (q9xgc9|msh2_maize : 204.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2688.0) & (original description: Putative MSH6, Description = DNA mismatch repair protein MSH6, PFAM = PF01624;PF05190;PF05192;PF05188;PF00488)' T
'28.2' 'DNA.repair' 'niben101scf02804_29562-32323' '(at3g04880 : 397.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 2 (DRT102); INVOLVED IN: response to UV, photoreactive repair, response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribose/galactose isomerase (InterPro:IPR003500), DNA-damage-repair/toleration protein, DRT102 (InterPro:IPR012100), Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 4975 Blast hits to 4975 proteins in 1551 species: Archae - 4; Bacteria - 3564; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (gnl|cdd|86006 : 127.0) no description available & (reliability: 794.0) & (original description: Putative DRT102, Description = DNA-damage-repair/toleration protein DRT102, PFAM = PF07883;PF02502)' T
'28.2' 'DNA.repair' 'niben101scf02854_915539-929508' '(at5g16630 : 707.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 345.0) no description available & (gnl|cdd|67450 : 268.0) no description available & (reliability: 1414.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF10403;PF10405;PF03835;PF01841;PF10404)' T
'28.2' 'DNA.repair' 'niben101scf02870_69058-76409' '(at3g07930 : 259.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative Mbd4, Description = Methyl-CpG-binding domain protein 4, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf03110_627292-635013' '(at1g75090 : 279.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2); Has 3694 Blast hits to 3694 proteins in 1578 species: Archae - 10; Bacteria - 3185; Metazoa - 5; Fungi - 2; Plants - 164; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|86301 : 234.0) no description available & (reliability: 558.0) & (original description: Putative tag, Description = DNA-3-methyladenine glycosylase 1, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben101scf03166_26769-33102' '(at5g57970 : 341.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 247.0) no description available & (reliability: 682.0) & (original description: Putative tag, Description = 3-methyl-adenine DNA glycosylase I, constitutive, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben101scf03224_110555-117443' '(at1g79650 : 438.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 359.0) no description available & (q40742|rad23_orysa : 292.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 99.5) no description available & (reliability: 876.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00240;PF09280;PF00627;PF00627)' T
'28.2' 'DNA.repair' 'niben101scf03306_179079-187033' '(at4g31340 : 241.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative Os08g0519400, Description = Os08g0519400 protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf03561_207683-225097' '(at1g52500 : 379.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 175.0) no description available & (reliability: 758.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T
'28.2' 'DNA.repair' 'niben101scf03674_215450-228635' '(at1g19485 : 566.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1132.0) & (original description: Putative At1g19485, Description = Transducin/WD-40 repeat-containing protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf03689_95205-108669' '(at4g35520 : 310.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 260.0) no description available & (gnl|cdd|30671 : 207.0) no description available & (reliability: 620.0) & (original description: Putative v1g88316, Description = Predicted protein, PFAM = PF13589;PF01119)' T
'28.2' 'DNA.repair' 'niben101scf03766_1724920-1736795' '(at3g28030 : 821.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 254.0) no description available & (gnl|cdd|29030 : 181.0) no description available & (reliability: 1642.0) & (original description: Putative xpg, Description = DNA repair protein complementing XP-G cells, PFAM = PF00867;PF00752)' T
'28.2' 'DNA.repair' 'niben101scf04113_1420569-1423567' '(at1g19480 : 314.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 263.0) no description available & (gnl|cdd|30471 : 177.0) no description available & (reliability: 628.0) & (original description: Putative glysoja_023078, Description = Putative DNA-3-methyladenine glycosylase yfjP, PFAM = PF00730)' T
'28.2' 'DNA.repair' 'niben101scf04183_45743-50330' '(at1g27410 : 456.0) DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: sterile alpha motif (SAM) domain-containing protein (TAIR:AT2G45700.1); Has 810 Blast hits to 798 proteins in 218 species: Archae - 6; Bacteria - 54; Metazoa - 272; Fungi - 214; Plants - 166; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|36575 : 234.0) no description available & (gnl|cdd|87294 : 80.0) no description available & (reliability: 912.0) & (original description: Putative Sb03g036570, Description = Putative uncharacterized protein Sb03g036570, PFAM = PF07522)' T
'28.2' 'DNA.repair' 'niben101scf04194_22214-33772' '(at5g64420 : 1127.0) DNA polymerase V family; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase V (InterPro:IPR007015); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37137 : 426.0) no description available & (gnl|cdd|68503 : 398.0) no description available & (reliability: 2254.0) & (original description: Putative At5g64420, Description = DNA polymerase phi subunit, PFAM = PF04931)' T
'28.2' 'DNA.repair' 'niben101scf04198_437447-470503' '(at5g04130 : 1049.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 1020.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 943.0) no description available & (gnl|cdd|35576 : 594.0) no description available & (reliability: 2074.0) & (original description: Putative GYRB, Description = DNA gyrase subunit B, chloroplastic/mitochondrial, PFAM = PF02518;PF00986;PF01751;PF00204)' T
'28.2' 'DNA.repair' 'niben101scf04417_83824-89209' '(at1g79650 : 421.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 371.0) no description available & (q40742|rad23_orysa : 293.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 107.0) no description available & (reliability: 842.0) & (original description: Putative RAD23B, Description = Ubiquitin receptor RAD23b, PFAM = PF09280;PF00627;PF00627;PF00240)' T
'28.2' 'DNA.repair' 'niben101scf04424_919200-928126' '(at1g80420 : 278.0) ATXRCC1; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|38436 : 157.0) no description available & (reliability: 556.0) & (original description: Putative XRCC1, Description = DNA-repair protein XRCC1, PFAM = PF00533)' T
'28.2' 'DNA.repair' 'niben101scf04765_40249-46809' '(at1g65070 : 854.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (gnl|cdd|80654 : 474.0) no description available & (gnl|cdd|35440 : 100.0) no description available & (reliability: 1708.0) & (original description: Putative BnaC02g16350D, Description = BnaC02g16350D protein, PFAM = PF01713;PF00488)' T
'28.2' 'DNA.repair' 'niben101scf04869_526805-543268' '(at5g64520 : 243.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 203.0) no description available & (reliability: 486.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2-like protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf04998_88295-107752' '(at3g02540 : 422.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 369.0) no description available & (q40742|rad23_orysa : 350.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 111.0) no description available & (reliability: 810.0) & (original description: Putative RAD1, Description = Putative DNA repair protein, PFAM = PF00240;PF00627;PF00627;PF09280)' T
'28.2' 'DNA.repair' 'niben101scf05004_119307-130750' '(at4g31150 : 270.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39618 : 214.0) no description available & (gnl|cdd|68078 : 170.0) no description available & (reliability: 540.0) & (original description: Putative endov, Description = Endonuclease V, PFAM = PF04493)' T
'28.2' 'DNA.repair' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1070.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T
'28.2' 'DNA.repair' 'niben101scf05124_8336-33601' '(at5g50340 : 634.0) ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink). & (gnl|cdd|83993 : 520.0) no description available & (reliability: 1268.0) & (original description: Putative sms, Description = DNA repair protein RadA, PFAM = PF13541;PF13481)' T
'28.2' 'DNA.repair' 'niben101scf05140_272049-297978' '(at3g19210 : 1244.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (gnl|cdd|35611 : 534.0) no description available & (gnl|cdd|30899 : 271.0) no description available & (q7g8y3|isw2_orysa : 201.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2488.0) & (original description: Putative CHR25, Description = Protein CHROMATIN REMODELING 25, PFAM = PF00176;PF00271)' T
'28.2' 'DNA.repair' 'niben101scf05157_500802-509436' '(at2g28560 : 372.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36646 : 139.0) no description available & (gnl|cdd|30003 : 134.0) no description available & (reliability: 744.0) & (original description: Putative RAD51B, Description = AtRAD51B, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'niben101scf05222_638673-677785' '(at5g54260 : 952.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 686.0) no description available & (gnl|cdd|67753 : 232.0) no description available & (reliability: 1904.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF00149;PF04152)' T
'28.2' 'DNA.repair' 'niben101scf05222_650334-678071' '(at5g54260 : 942.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 688.0) no description available & (gnl|cdd|67753 : 235.0) no description available & (reliability: 1884.0) & (original description: Putative MRE11A, Description = Double-strand break repair protein MRE11A, PFAM = PF04152;PF00149)' T
'28.2' 'DNA.repair' 'niben101scf05283_59726-73296' '(at1g30480 : 323.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (gnl|cdd|37207 : 284.0) no description available & (reliability: 646.0) & (original description: Putative DRT111, Description = DNA-damage-repair/toleration protein DRT111, chloroplastic, PFAM = PF01585)' T
'28.2' 'DNA.repair' 'niben101scf05998_363458-367671' '(at4g09140 : 976.0) Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.; MUTL-homologue 1 (MLH1); FUNCTIONS IN: protein binding, bridging; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Mlh1 (InterPro:IPR011186), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 6802 Blast hits to 6727 proteins in 2342 species: Archae - 68; Bacteria - 4480; Metazoa - 469; Fungi - 496; Plants - 114; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|37190 : 764.0) no description available & (gnl|cdd|30671 : 368.0) no description available & (reliability: 1952.0) & (original description: Putative MLH1, Description = DNA mismatch repair protein MLH1, PFAM = PF13589;PF16413;PF01119)' T
'28.2' 'DNA.repair' 'niben101scf06077_9727-26563' '(at4g35520 : 402.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 282.0) no description available & (gnl|cdd|30671 : 214.0) no description available & (reliability: 804.0) & (original description: Putative v1g88316, Description = Predicted protein, PFAM = PF08676;PF01119;PF13589)' T
'28.2' 'DNA.repair' 'niben101scf06091_421427-429894' '(at5g57970 : 320.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 251.0) no description available & (reliability: 640.0) & (original description: Putative tag, Description = Putative GMP synthase [glutamine-hydrolyzing], PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben101scf06236_47108-52501' '(at2g45280 : 443.0) Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions.; RAS associated with diabetes protein 51C (RAD51C); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1). & (gnl|cdd|36647 : 325.0) no description available & (gnl|cdd|29989 : 252.0) no description available & (q96449|dmc1_soybn : 100.0) Meiotic recombination protein DMC1 homolog - Glycine max (Soybean) & (reliability: 886.0) & (original description: Putative RAD51C, Description = DNA repair protein RAD51 homolog 3, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'niben101scf06348_67076-74713' '(at1g01880 : 595.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: single-stranded DNA endonuclease family protein (TAIR:AT3G48900.2). & (gnl|cdd|37730 : 203.0) no description available & (gnl|cdd|29030 : 185.0) no description available & (reliability: 1190.0) & (original description: Putative GEN1, Description = Flap endonuclease GEN-like 1, PFAM = PF00867;PF00752)' T
'28.2' 'DNA.repair' 'niben101scf06736_233480-237380' '(at5g44680 : 380.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 231.0) no description available & (reliability: 760.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T
'28.2' 'DNA.repair' 'niben101scf07035_808700-818218' '(at3g23100 : 209.0) A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein.; homolog of human DNA ligase iv-binding protein XRCC4 (XRCC4); FUNCTIONS IN: protein C-terminus binding; INVOLVED IN: double-strand break repair, DNA recombination, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), DNA double-strand break repair and VJ recombination XRCC4, C-terminal (InterPro:IPR014751), DNA double-strand break repair and VJ recombination XRCC4 (InterPro:IPR010585); BEST Arabidopsis thaliana protein match is: DNA double-strand break repair and VJ recombination XRCC4 (TAIR:AT1G61410.1); Has 189 Blast hits to 182 proteins in 54 species: Archae - 0; Bacteria - 3; Metazoa - 88; Fungi - 4; Plants - 48; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative XRCC4, Description = DNA repair protein XRCC4, PFAM = PF06632)' T
'28.2' 'DNA.repair' 'niben101scf07161_22096-63198' '(at2g31970 : 1490.0) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.; RAD50; FUNCTIONS IN: zinc ion binding, ATP binding, nuclease activity; INVOLVED IN: DNA repair, double-strand break repair, telomere capping, mitotic recombination, telomere maintenance; LOCATED IN: nucleus, Mre11 complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc hook, Rad50 (InterPro:IPR013134), Rad50 zinc hook (InterPro:IPR007517), Recombination/repair protein Rad50 (InterPro:IPR004584); Has 105617 Blast hits to 56308 proteins in 2913 species: Archae - 1820; Bacteria - 19240; Metazoa - 45759; Fungi - 8381; Plants - 4805; Viruses - 470; Other Eukaryotes - 25142 (source: NCBI BLink). & (gnl|cdd|36180 : 942.0) no description available & (gnl|cdd|72999 : 138.0) no description available & (reliability: 2980.0) & (original description: Putative RAD50, Description = DNA repair protein RAD50, PFAM = PF04423;PF13476)' T
'28.2' 'DNA.repair' 'niben101scf07287_152925-156006' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 259.0) no description available & (gnl|cdd|30471 : 159.0) no description available & (reliability: 650.0) & (original description: Putative BnaA06g13680D, Description = BnaA06g13680D protein, PFAM = PF00730)' T
'28.2' 'DNA.repair' 'niben101scf07368_32970-45249' '(at2g36490 : 620.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'niben101scf07368_34435-89874' '(at2g36490 : 474.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 98.7) no description available & (reliability: 948.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf07577_24638-46705' '(at2g28560 : 461.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36646 : 165.0) no description available & (gnl|cdd|29989 : 161.0) no description available & (reliability: 922.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T
'28.2' 'DNA.repair' 'niben101scf07680_185814-193391' '(q9xed7|r51a2_maize : 589.0) DNA repair protein RAD51 homolog B (Rad51-like protein B) (RAD51B) (ZmRAD51b) - Zea mays (Maize) & (at5g20850 : 585.0) Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation.; RAS associated with diabetes protein 51 (RAD51); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, double-strand break repair, response to gamma radiation, response to radiation, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein Rad51 (InterPro:IPR011941), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71852 : 465.0) no description available & (gnl|cdd|36646 : 342.0) no description available & (reliability: 1170.0) & (original description: Putative RAD51, Description = DNA repair protein RAD51 homolog, PFAM = PF14520;PF08423)' T
'28.2' 'DNA.repair' 'niben101scf08305_91497-104134' '(at5g04560 : 659.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 89.9) no description available & (reliability: 1246.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'niben101scf08465_207852-219544' '(at5g16630 : 717.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 354.0) no description available & (gnl|cdd|67450 : 265.0) no description available & (reliability: 1434.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF01841;PF10403;PF10404;PF03835;PF10405)' T
'28.2' 'DNA.repair' 'niben101scf08533_80577-94235' '(at5g04560 : 555.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1074.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T
'28.2' 'DNA.repair' 'niben101scf08533_81625-97522' '(at5g04560 : 549.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1062.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T
'28.2' 'DNA.repair' 'niben101scf08635_306848-317566' '(at3g20475 : 174.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative MSH5, Description = DNA mismatch repair protein MSH5, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf08685_65545-80025' '(at4g17380 : 1231.0) Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.; MUTS-like protein 4 (MSH4); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, synapsis, meiotic prophase I; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: flower, sporocyte; EXPRESSED DURING: petal differentiation and expansion stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 13303 Blast hits to 13154 proteins in 2712 species: Archae - 169; Bacteria - 9120; Metazoa - 661; Fungi - 837; Plants - 451; Viruses - 3; Other Eukaryotes - 2062 (source: NCBI BLink). & (gnl|cdd|35441 : 600.0) no description available & (gnl|cdd|81564 : 370.0) no description available & (q9xgc9|msh2_maize : 151.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2462.0) & (original description: Putative MSH4, Description = DNA mismatch repair protein MSH4, PFAM = PF05192;PF05190;PF00488)' T
'28.2' 'DNA.repair' 'niben101scf08812_114598-352383' '(at5g41370 : 301.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 243.0) no description available & (reliability: 602.0) & (original description: Putative hay, Description = TFIIH basal transcription factor complex helicase XPB subunit, PFAM = PF13625)' T
'28.2' 'DNA.repair' 'niben101scf08812_114703-118035' '(at5g41370 : 108.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 100.0) no description available & (reliability: 216.0) & (original description: Putative hay, Description = DNA repair helicase rad25, PFAM = PF13625)' T
'28.2' 'DNA.repair' 'niben101scf09014_212210-227287' '(at5g54260 : 953.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 682.0) no description available & (gnl|cdd|67753 : 228.0) no description available & (reliability: 1906.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF00149;PF04152)' T
'28.2' 'DNA.repair' 'niben101scf09133_341845-346002' '(at3g12040 : 155.0) DNA-3-methyladenine glycosylase (MAG); FUNCTIONS IN: DNA binding, alkylbase DNA N-glycosylase activity, catalytic activity; INVOLVED IN: base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methylpurine-DNA glycosylase (MPG) (InterPro:IPR003180), Formyl transferase, C-terminal-like (InterPro:IPR011034); Has 2384 Blast hits to 2384 proteins in 1044 species: Archae - 26; Bacteria - 1995; Metazoa - 85; Fungi - 6; Plants - 30; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|39686 : 117.0) no description available & (gnl|cdd|65976 : 91.9) no description available & (reliability: 310.0) & (original description: Putative MAG, Description = DNA-3-methyladenine glycosylase, PFAM = PF02245)' T
'28.2' 'DNA.repair' 'niben101scf09372_79342-89932' '(at3g02540 : 441.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 370.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 361.0) no description available & (gnl|cdd|29207 : 111.0) no description available & (reliability: 828.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF09280;PF00240;PF00627;PF00627)' T
'28.2' 'DNA.repair' 'niben101scf09505_184114-198841' '(at1g49980 : 683.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 581.0) no description available & (gnl|cdd|48491 : 362.0) no description available & (reliability: 1366.0) & (original description: Putative Polk, Description = Polymerase kappa isoform 9, PFAM = PF11799;PF11798;PF00817)' T
'28.2' 'DNA.repair' 'niben101scf09505_184150-198801' '(at1g49980 : 639.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 479.0) no description available & (gnl|cdd|48491 : 277.0) no description available & (reliability: 1278.0) & (original description: Putative POLK, Description = DNA-directed polymerase kappa, PFAM = PF00817;PF00817;PF11798;PF11799)' T
'28.2' 'DNA.repair' 'niben101scf09512_471493-475455' '(at1g01490 : 93.6) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative Sb01g030730, Description = Putative uncharacterized protein Sb01g030730, PFAM = PF00403)' T
'28.2' 'DNA.repair' 'niben101scf10298_252193-264454' '(at5g28740 : 1323.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|37258 : 1077.0) no description available & (reliability: 2646.0) & (original description: Putative xab2, Description = Similar to Xab2 protein, PFAM = )' T
'28.2' 'DNA.repair' 'niben101scf10650_92858-120211' '(at5g48120 : 744.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 421.0) no description available & (reliability: 1488.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500;PF12460)' T
'28.2' 'DNA.repair' 'niben101scf11037_208204-219600' '(at1g03190 : 1323.0) UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.; ULTRAVIOLET HYPERSENSITIVE 6 (UVH6); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, response to UV, response to heat; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Xeroderma pigmentosum group D protein (InterPro:IPR001945), Helicase-like, DEXD box c2 type (InterPro:IPR006554), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Protein of unknown function DUF1227 (InterPro:IPR010643); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3290 Blast hits to 2576 proteins in 779 species: Archae - 308; Bacteria - 1186; Metazoa - 653; Fungi - 359; Plants - 198; Viruses - 2; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36346 : 1134.0) no description available & (gnl|cdd|47794 : 299.0) no description available & (reliability: 2646.0) & (original description: Putative XPD, Description = DNA repair helicase XPD, PFAM = PF13307;PF06733;PF06777)' T
'28.2' 'DNA.repair' 'niben101scf12422_90846-96034' '(at3g47830 : 308.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|30526 : 110.0) no description available & (reliability: 616.0) & (original description: Putative At3g47830, Description = Putative DNA glycosylase At3g47830, PFAM = PF00730)' T
'28.2' 'DNA.repair' 'niben101scf12994_89614-103705' '(at3g18524 : 1201.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 1130.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (gnl|cdd|35440 : 679.0) no description available & (gnl|cdd|30598 : 526.0) no description available & (reliability: 2402.0) & (original description: Putative msh2, Description = DNA mismatch repair protein, PFAM = PF05192;PF05188;PF00488;PF05190)' T
'28.2' 'DNA.repair' 'niben101scf12994_90209-96349' '(q9xgc9|msh2_maize : 245.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (at3g18524 : 244.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (gnl|cdd|73044 : 214.0) no description available & (gnl|cdd|35440 : 190.0) no description available & (reliability: 488.0) & (original description: Putative msh2, Description = DNA mismatch repair protein msh-2, PFAM = PF00488)' T
'28.2' 'DNA.repair' 'niben101scf13002_343311-349414' '(at3g12040 : 336.0) DNA-3-methyladenine glycosylase (MAG); FUNCTIONS IN: DNA binding, alkylbase DNA N-glycosylase activity, catalytic activity; INVOLVED IN: base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methylpurine-DNA glycosylase (MPG) (InterPro:IPR003180), Formyl transferase, C-terminal-like (InterPro:IPR011034); Has 2384 Blast hits to 2384 proteins in 1044 species: Archae - 26; Bacteria - 1995; Metazoa - 85; Fungi - 6; Plants - 30; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|39686 : 242.0) no description available & (gnl|cdd|65976 : 231.0) no description available & (reliability: 672.0) & (original description: Putative MAG, Description = DNA-3-methyladenine glycosylase, PFAM = PF02245)' T
'28.2' 'DNA.repair' 'niben101scf13036_195636-207578' '(at5g04560 : 689.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.8) no description available & (reliability: 1376.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'niben101scf14076_52017-64261' '(at2g36490 : 684.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 1368.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = PF15628;PF15629)' T
'28.2' 'DNA.repair' 'niben101scf14837_289279-295050' '(at5g44680 : 363.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 227.0) no description available & (reliability: 726.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold5229_50516-58141' '(at1g48650 : 164.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative F23H14, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold9829_33525-49894' '(at2g25910 : 436.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 148.0) no description available & (gnl|cdd|28891 : 92.8) no description available & (reliability: 872.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF01612;PF00013)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold10752_42424-45889' '(at1g76500 : 130.0) Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light; SUPPRESSOR OF PHYB-4#3 (SOB3); FUNCTIONS IN: DNA binding; INVOLVED IN: photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G20900.1); Has 2179 Blast hits to 1721 proteins in 190 species: Archae - 0; Bacteria - 553; Metazoa - 266; Fungi - 109; Plants - 845; Viruses - 16; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 250.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold10860_2148-5112' '(at2g45430 : 223.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 446.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold11242_39235-46413' '(at5g67240 : 333.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 174.0) no description available & (gnl|cdd|47785 : 85.4) no description available & (reliability: 666.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 1, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold12649_7461-16014' '(at2g21520 : 859.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 275.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1718.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold13781_30093-38138' '(at3g19130 : 421.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 90.5) no description available & (reliability: 842.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold15185_11525-16120' '(at5g63460 : 87.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 174.8) & (original description: Putative BnaC02g42530D, Description = BnaC02g42530D protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold15988_1789-9795' '(at5g25100 : 1002.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1). & (gnl|cdd|36492 : 898.0) no description available & (gnl|cdd|66650 : 666.0) no description available & (reliability: 1956.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold19504_25546-34290' '(at5g66840 : 157.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold22099_16188-22246' '(at3g60600 : 201.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 117.0) no description available & (gnl|cdd|84916 : 98.5) no description available & (reliability: 402.0) & (original description: Putative PVA11, Description = Vesicle-associated protein 1-1, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold24265_22297-29425' '(at1g47500 : 429.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 130.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 780.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold24684_7914-12005' '(at3g42170 : 404.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 401.0) no description available & (p08770|tra1_maize : 321.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 93.8) no description available & (reliability: 808.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF05699;PF14372;PF02892)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold28337_837-5797' '(at4g24800 : 204.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold29326_11620-38959' '(at2g01130 : 1517.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 953.0) no description available & (gnl|cdd|31829 : 474.0) no description available & (reliability: 2864.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF07717;PF00035;PF00271;PF00270;PF04408)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold29326_11862-23285' '(at2g01130 : 1185.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 855.0) no description available & (gnl|cdd|31829 : 457.0) no description available & (reliability: 2246.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00271;PF00270;PF04408;PF07717)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold30224_1004-4448' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold30676_4338-13178' '(at2g01970 : 714.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 697.0) no description available & (gnl|cdd|66650 : 524.0) no description available & (reliability: 1376.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold37404_4149-7608' '(at4g17800 : 239.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 466.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold40306_12327-22472' '(at1g64260 : 134.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 258.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF10551;PF03108;PF04434;PF00564)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold41610_5684-13940' '(at1g54490 : 244.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 237.0) no description available & (gnl|cdd|34654 : 119.0) no description available & (reliability: 488.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold42687_1218-7774' '(at2g25170 : 418.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 306.0) no description available & (q7g8y3|isw2_orysa : 206.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 118.0) no description available & (reliability: 836.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 3, PFAM = PF00271;PF00176)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold57088_1955-7635' '(at1g71260 : 159.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 136.0) no description available & (reliability: 318.0) & (original description: Putative WHY1, Description = Protein WHIRLY 2, PFAM = PF08536)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold62361_4143-6683' '(at3g60600 : 118.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 88.0) no description available & (reliability: 236.0) & (original description: Putative Os02g0661900, Description = Os02g0661900 protein, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold66776_626-6839' '(at1g44542 : 280.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT4G34180.1); Has 1444 Blast hits to 1444 proteins in 543 species: Archae - 85; Bacteria - 1182; Metazoa - 21; Fungi - 4; Plants - 86; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|32062 : 116.0) no description available & (reliability: 560.0) & (original description: Putative PGSC0003DMG400023115, Description = Kynurenine formamidase-like protein, PFAM = PF04199)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold75968_13-7973' '(at2g25170 : 795.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 458.0) no description available & (gnl|cdd|84584 : 260.0) no description available & (q7g8y3|isw2_orysa : 202.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1590.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 5, PFAM = PF00628;PF00176;PF00385;PF00385)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold83538_395-5810' '(at3g27970 : 464.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 263.0) no description available & (gnl|cdd|47785 : 105.0) no description available & (reliability: 928.0) & (original description: Putative C2H2L25, Description = RNA exonuclease 4, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold85452_1-4189' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold101812_665-3817' '(at3g42170 : 478.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 282.0) no description available & (p08770|tra1_maize : 185.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 956.0) & (original description: Putative HAT, Description = Putative zinc finger BED domain-containing protein DAYSLEEPER-like, PFAM = PF02892;PF14372)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold105250_1-3368' '(at1g49920 : 110.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 220.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF10551;PF04434)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold107736_1-3061' '(gnl|cdd|30860 : 184.0) no description available & (gnl|cdd|35572 : 164.0) no description available & (at5g27680 : 134.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold118789_1-2258' '(at1g19260 : 246.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold142782_1-1234' '(gnl|cdd|36337 : 129.0) no description available & (p03010|trac9_maize : 118.0) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 114.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 93.1) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400040321, Description = Putative AC9 transposase, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'nbv0.3scaffold171306_1-737' '(at1g43260 : 89.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold158_814944-817601' '(at3g12410 : 98.2) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 88.2) no description available & (reliability: 179.4) & (original description: Putative Os01g0737600, Description = Os01g0737600 protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold174_601880-607276' '(at5g67240 : 285.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 167.0) no description available & (gnl|cdd|47785 : 85.8) no description available & (reliability: 570.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 3, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold217_464590-467928' '(gnl|cdd|36337 : 217.0) no description available & (p08770|tra1_maize : 172.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 171.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 342.0) & (original description: Putative PGSC0003DMG400017490, Description = 93317-95488, PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold222_78923-84936' '(at2g27110 : 1022.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2044.0) & (original description: Putative FRS3, Description = Protein FAR1-RELATED SEQUENCE 3, PFAM = PF04434;PF03101;PF10551;PF07258)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold234_678505-702275' '(at3g52905 : 180.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, response to DNA damage stimulus, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 4393 Blast hits to 4393 proteins in 1559 species: Archae - 0; Bacteria - 3177; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 1190 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative GRF1, Description = GRF domain class transcription factor, PFAM = PF03652)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold320_792155-801295' '(at5g66840 : 159.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold325_302426-308131' '(at2g21540 : 608.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 269.0) no description available & (gnl|cdd|84928 : 142.0) no description available & (reliability: 1108.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold326_160876-166307' '(at3g27970 : 506.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 286.0) no description available & (gnl|cdd|47785 : 106.0) no description available & (reliability: 1012.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold348_587518-598089' '(at1g22260 : 468.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 88.8) no description available & (reliability: 912.0) & (original description: Putative ZYP1A, Description = Synaptonemal complex protein 1, PFAM = )' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold415_592657-615530' '(at3g02060 : 1206.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 638.0) no description available & (gnl|cdd|35565 : 354.0) no description available & (reliability: 2412.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00271;PF02559;PF00270)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold454_826226-829698' '(gnl|cdd|36337 : 306.0) no description available & (p08770|tra1_maize : 277.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 208.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 104.0) no description available & (reliability: 416.0) & (original description: Putative BnaC03g16310D, Description = BnaC03g16310D protein, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold469_216582-221420' '(at1g71260 : 139.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 134.0) no description available & (reliability: 278.0) & (original description: Putative WHY1, Description = Protein WHIRLY 2, PFAM = PF08536)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold587_232306-238482' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 332.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF00564;PF04434;PF03108)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold599_667012-669986' '(at2g45430 : 199.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 398.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold684_13548-17896' '(at1g64260 : 105.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold727_187063-190838' '(at4g17800 : 246.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 478.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold974_42919-59092' '(at5g15170 : 753.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 426.0) no description available & (gnl|cdd|87018 : 392.0) no description available & (reliability: 1506.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold1037_331274-387510' '(at2g25170 : 1697.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35605 : 713.0) no description available & (q7g8y3|isw2_orysa : 400.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 310.0) no description available & (reliability: 3394.0) & (original description: Putative PKL, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00628;PF00385;PF00385;PF00176;PF06465;PF06461;PF00271)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold1315_24762-27708' '(at2g45430 : 218.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 141.0) no description available & (reliability: 436.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold1349_264656-276569' '(at1g48650 : 1337.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 592.0) no description available & (gnl|cdd|31829 : 353.0) no description available & (reliability: 2674.0) & (original description: Putative At1g48650, Description = DExH-box ATP-dependent RNA helicase DExH3, PFAM = PF00035;PF00270;PF07717;PF00271;PF04408)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold1948_152234-156971' '(at4g24800 : 204.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold1964_5363-7119' '(at1g43260 : 96.3) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative PGSC0003DMG400030248, Description = Putative transposase, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold2017_157230-160663' '(gnl|cdd|36337 : 152.0) no description available & (p08770|tra1_maize : 144.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 119.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaC01g44680D, Description = BnaC01g44680D protein, PFAM = PF14372)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold2600_156747-194394' '(at3g46960 : 1583.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 1231.0) no description available & (gnl|cdd|34219 : 703.0) no description available & (reliability: 3166.0) & (original description: Putative SKI2, Description = Antiviral helicase, PFAM = PF08148;PF13234;PF00271;PF00270)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold2904_3626-13785' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 286.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF04434;PF10551;PF03108;PF00564)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold2927_268060-276453' '(at4g35220 : 342.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 115.0) no description available & (reliability: 684.0) & (original description: Putative CCC_00854, Description = Kynurenine formamidase bacterial, PFAM = PF04199;PF04199)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold3526_160550-166728' '(at5g63460 : 130.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400015243, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037;PF10172)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold3545_187491-191845' '(at3g42170 : 823.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 399.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1646.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF02892;PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold3598_58860-236510' '(gnl|cdd|30860 : 343.0) no description available & (gnl|cdd|35572 : 261.0) no description available & (at1g60930 : 201.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF16124;PF00271;PF09382;PF14493;PF00570)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold4287_59349-64005' '(gnl|cdd|68508 : 98.0) no description available & (at3g17450 : 88.6) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400017078, Description = Putative ovule protein, PFAM = PF04937;PF04937)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold4632_53204-65753' '(gnl|cdd|35762 : 210.0) no description available & (gnl|cdd|34623 : 122.0) no description available & (at3g15140 : 82.4) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative eri2, Description = ERI1 exoribonuclease 2, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold4721_84916-112604' '(at2g01440 : 1127.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31393 : 596.0) no description available & (gnl|cdd|35565 : 238.0) no description available & (reliability: 2254.0) & (original description: Putative RECG, Description = ATP-dependent DNA helicase homolog RECG, chloroplastic, PFAM = PF00271;PF00270)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold5722_128028-132602' '(at5g63460 : 99.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 198.8) & (original description: Putative BnaC02g42530D, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold6403_70124-74073' '(at1g49920 : 96.7) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold6566_52353-61351' '(at2g25910 : 318.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 119.0) no description available & (reliability: 636.0) & (original description: Putative TCM_037248, Description = 3'-5' exonuclease domain-containing protein / K domain-containing protein / KH domain-containing protein isoform 3, PFAM = PF00013;PF01612)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold8382_5268-14202' '(at1g08350 : 620.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1602 Blast hits to 1535 proteins in 321 species: Archae - 0; Bacteria - 3; Metazoa - 611; Fungi - 269; Plants - 455; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 578.0) no description available & (gnl|cdd|66650 : 485.0) no description available & (reliability: 1176.0) & (original description: Putative TMN5, Description = Transmembrane 9 superfamily member 5, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold8789_17741-29261' '(at2g32415 : 431.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT5G35910.1). & (gnl|cdd|37417 : 246.0) no description available & (gnl|cdd|85567 : 173.0) no description available & (reliability: 862.0) & (original description: Putative srm, Description = Exosome component 10, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold9138_1754-5916' '(at1g64260 : 121.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551;PF04434)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 306.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold9881_56-11884' '(at4g35740 : 810.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 472.0) no description available & (gnl|cdd|30860 : 414.0) no description available & (reliability: 1620.0) & (original description: Putative RECQL3, Description = ATP-dependent DNA helicase Q-like 3, PFAM = PF00270;PF00271;PF16124)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold18861_1-1543' '(at1g43260 : 140.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 140.0) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'nbv0.5scaffold44688_1-789' '(at3g17450 : 163.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 145.0) no description available & (reliability: 316.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'niben044ctg24614548_1-530' '(gnl|cdd|36337 : 125.0) no description available & (p08770|tra1_maize : 118.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 83.6) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben044scf00000710ctg000_793-3503' '(at3g29765 : 196.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'niben044scf00001100ctg026_3786-6181' '(at3g51700 : 105.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1335 Blast hits to 1330 proteins in 296 species: Archae - 2; Bacteria - 310; Metazoa - 217; Fungi - 167; Plants - 426; Viruses - 5; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative MTR_4g134740, Description = PIF1 helicase, PFAM = PF02689)' T
'28.99' 'DNA.unspecified' 'niben044scf00001496ctg007_6353-9653' '(at4g39810 : 319.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G74390.1); Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0; Bacteria - 1272; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|47785 : 100.0) no description available & (reliability: 638.0) & (original description: Putative ugu1, Description = Exonuclease, putative, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben044scf00001941ctg005_1267-8258' '(at4g34490 : 581.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 479.0) no description available & (gnl|cdd|85310 : 202.0) no description available & (reliability: 1162.0) & (original description: Putative CAP1, Description = Cyclase-associated protein 1, PFAM = PF01213;PF08603)' T
'28.99' 'DNA.unspecified' 'niben044scf00002213ctg012_1-10490' '(at4g14700 : 958.0) Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator.; origin recognition complex 1 (ORC1A); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin of replication complex 1B (TAIR:AT4G12620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36727 : 615.0) no description available & (gnl|cdd|72858 : 235.0) no description available & (reliability: 1916.0) & (original description: Putative ORC1, Description = Origin of replication complex subunit 1, PFAM = PF01426;PF00004;PF00628)' T
'28.99' 'DNA.unspecified' 'niben044scf00002419ctg014_3944-12130' '(at5g15170 : 494.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 258.0) no description available & (gnl|cdd|87018 : 253.0) no description available & (reliability: 988.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T
'28.99' 'DNA.unspecified' 'niben044scf00002763ctg000_1755-5002' '(at2g45430 : 193.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 386.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben044scf00003968ctg000_20572-24425' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 121.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben044scf00007006ctg003_2261-10581' '(gnl|cdd|37255 : 636.0) no description available & (at1g54490 : 585.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|34654 : 421.0) no description available & (reliability: 1170.0) & (original description: Putative xrn2, Description = LOC100049102 protein, PFAM = PF03159;PF00098)' T
'28.99' 'DNA.unspecified' 'niben044scf00007089ctg003_1-2275' '(at2g48100 : 95.5) Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative At2g48100, Description = Putative ovule protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben044scf00007893ctg006_1-3822' '(at4g36490 : 332.0) SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 203.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 648.0) & (original description: Putative BnaC04g33440D, Description = BnaC04g33440D protein, PFAM = PF00650)' T
'28.99' 'DNA.unspecified' 'niben044scf00009819ctg006_1-6400' '(at3g19130 : 400.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 87.0) no description available & (p19683|roc4_nicsy : 82.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 800.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'niben044scf00012370ctg005_13518-25428' '(at1g54490 : 230.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 190.0) no description available & (gnl|cdd|34654 : 144.0) no description available & (reliability: 460.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben044scf00012383ctg000_2764-6955' '(at1g49920 : 101.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T
'28.99' 'DNA.unspecified' 'niben044scf00013594ctg002_3463-12848' '(at2g25170 : 1023.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 630.0) no description available & (q7g8y3|isw2_orysa : 323.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 272.0) no description available & (reliability: 2046.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 3, PFAM = PF00176;PF00271;PF00628;PF00385;PF00385)' T
'28.99' 'DNA.unspecified' 'niben044scf00015222ctg005_3977-21117' '(at3g57300 : 1809.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1241.0) no description available & (gnl|cdd|84584 : 294.0) no description available & (q7g8y3|isw2_orysa : 255.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3618.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00176;PF13892;PF00271)' T
'28.99' 'DNA.unspecified' 'niben044scf00015325ctg005_13283-15827' '(at1g43260 : 105.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 99.0) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'niben044scf00015746ctg001_1-5964' '(at2g25170 : 191.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative CHR6, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF08074)' T
'28.99' 'DNA.unspecified' 'niben044scf00016699ctg004_18346-26881' '(at2g21520 : 903.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1806.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T
'28.99' 'DNA.unspecified' 'niben044scf00017083ctg001_1-5029' '(at4g35740 : 472.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 290.0) no description available & (gnl|cdd|30860 : 229.0) no description available & (reliability: 944.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00271;PF16124)' T
'28.99' 'DNA.unspecified' 'niben044scf00018319ctg002_5725-10043' '(at5g26940 : 258.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39990 : 140.0) no description available & (gnl|cdd|47785 : 125.0) no description available & (reliability: 516.0) & (original description: Putative DPD1, Description = Exonuclease DPD1, chloroplastic/mitochondrial, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben044scf00018580ctg000_1612-14931' '(at1g27880 : 829.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (gnl|cdd|35572 : 380.0) no description available & (gnl|cdd|30860 : 308.0) no description available & (reliability: 1658.0) & (original description: Putative RECQL5, Description = ATP-dependent DNA helicase Q-like 5, PFAM = PF00271;PF00270)' T
'28.99' 'DNA.unspecified' 'niben044scf00019477ctg009_1-3459' '(at3g42170 : 812.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 396.0) no description available & (p08770|tra1_maize : 263.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 107.0) no description available & (reliability: 1624.0) & (original description: Putative Os01g0518400, Description = Zinc finger BED domain-containing protein RICESLEEPER 4, PFAM = PF14372;PF05699;PF02892)' T
'28.99' 'DNA.unspecified' 'niben044scf00020173ctg002_1-756' '(gnl|cdd|68508 : 135.0) no description available & (at3g17450 : 134.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'niben044scf00020634ctg002_36221-39111' '(at4g17800 : 195.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 378.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben044scf00020802ctg023_424-6221' '(at3g42170 : 766.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 396.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1532.0) & (original description: Putative HAT, Description = Putative zinc finger BED domain-containing protein DAYSLEEPER-like, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben044scf00021368ctg004_1-1474' '(at1g19260 : 145.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'niben044scf00021684ctg000_1077-10934' '(at5g63190 : 1009.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 905.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 2018.0) & (original description: Putative At4g24800, Description = AT4g24800/F6I7_10, PFAM = PF02847;PF02847;PF02847;PF02847)' T
'28.99' 'DNA.unspecified' 'niben044scf00021684ctg000_2544-8090' '(at4g24800 : 206.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 101.0) no description available & (reliability: 408.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T
'28.99' 'DNA.unspecified' 'niben044scf00021684ctg002_7383-13298' '(at5g63190 : 920.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 855.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 1840.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T
'28.99' 'DNA.unspecified' 'niben044scf00022004ctg001_1127-5922' '(gnl|cdd|36337 : 240.0) no description available & (at3g42170 : 198.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 163.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben044scf00022471ctg002_7543-11963' '(at3g42170 : 826.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 398.0) no description available & (p08770|tra1_maize : 275.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1652.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF02892;PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben044scf00023242ctg005_9008-11824' '(gnl|cdd|68508 : 147.0) no description available & (at1g43260 : 120.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'niben044scf00024116ctg010_1642-14805' '(at3g46960 : 413.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 139.0) no description available & (reliability: 826.0) & (original description: Putative SKI2, Description = Helicase SKI2W, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben044scf00025688ctg008_357-6766' '(at2g25910 : 284.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 124.0) no description available & (reliability: 568.0) & (original description: Putative BnaA04g15250D, Description = Exonuclease 3'-5' domain-containing protein 1, PFAM = PF01612;PF00013)' T
'28.99' 'DNA.unspecified' 'niben044scf00026747ctg003_1-6048' '(at3g02060 : 544.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 274.0) no description available & (gnl|cdd|35565 : 200.0) no description available & (reliability: 1088.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00270;PF02559)' T
'28.99' 'DNA.unspecified' 'niben044scf00027103ctg002_1-8390' '(at4g35220 : 397.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 123.0) no description available & (reliability: 794.0) & (original description: Putative At4g35220, Description = AT4g35220/F23E12_220, PFAM = PF04199)' T
'28.99' 'DNA.unspecified' 'niben044scf00027632ctg001_1266-5441' '(at5g67240 : 151.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 98.6) no description available & (reliability: 302.0) & (original description: Putative BnaA06g25760D, Description = BnaA06g25760D protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben044scf00028919ctg012_7024-12906' '(at2g01970 : 949.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 873.0) no description available & (gnl|cdd|66650 : 615.0) no description available & (reliability: 1858.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben044scf00030685ctg009_13091-19169' '(at1g49920 : 142.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.6) no description available & (reliability: 284.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF00564;PF03108;PF04434;PF10551)' T
'28.99' 'DNA.unspecified' 'niben044scf00030940ctg014_494-7664' '(at3g19130 : 423.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 93.2) no description available & (reliability: 846.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'niben044scf00034184ctg010_10054-28247' '(at3g21430 : 827.0) ALWAYS EARLY 3 (ALY3); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT3G05380.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36237 : 216.0) no description available & (gnl|cdd|87115 : 141.0) no description available & (reliability: 1654.0) & (original description: Putative ALY3, Description = Protein ALWAYS EARLY 3, PFAM = PF06584;PF00249)' T
'28.99' 'DNA.unspecified' 'niben044scf00036215ctg008_597-7527' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben044scf00041770ctg000_21223-25585' '(gnl|cdd|72948 : 90.8) no description available & (at1g52950 : 87.8) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Protein of unknown function DUF223 (InterPro:IPR003871), Replication factor A, C-terminal (InterPro:IPR013955); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05642.1); Has 1159 Blast hits to 1070 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 144; Plants - 865; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF08646)' T
'28.99' 'DNA.unspecified' 'niben044scf00044271ctg002_4105-8196' '(at3g42170 : 401.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 398.0) no description available & (p08770|tra1_maize : 311.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 94.6) no description available & (reliability: 802.0) & (original description: Putative BnaC06g31060D, Description = BnaC06g31060D protein, PFAM = PF14372;PF02892;PF05699)' T
'28.99' 'DNA.unspecified' 'niben044scf00053883ctg002_1-3577' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben044scf00059728ctg004_30007-36632' '(gnl|cdd|37891 : 586.0) no description available & (at3g49830 : 557.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G67630.1); Has 1217 Blast hits to 1215 proteins in 377 species: Archae - 91; Bacteria - 194; Metazoa - 298; Fungi - 306; Plants - 114; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|87013 : 408.0) no description available & (reliability: 1114.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068;PF05496)' T
'28.99' 'DNA.unspecified' 'niben101ctg16037_1127-6451' '(at2g21540 : 619.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 263.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1124.0) & (original description: Putative Os05g0545000, Description = Os05g0545000 protein, PFAM = PF00650;PF03765)' T
'28.99' 'DNA.unspecified' 'niben101scf00063_636261-642788' '(at5g07710 : 479.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47785 : 104.0) no description available & (reliability: 958.0) & (original description: Putative NEN1, Description = Protein NEN1, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf00066_499988-503276' '(at1g64260 : 99.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative Sb07g022850, Description = Putative ovule protein, PFAM = PF10551;PF04434)' T
'28.99' 'DNA.unspecified' 'niben101scf00107_376556-387629' '(at1g44542 : 276.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT4G34180.1); Has 1444 Blast hits to 1444 proteins in 543 species: Archae - 85; Bacteria - 1182; Metazoa - 21; Fungi - 4; Plants - 86; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|86574 : 112.0) no description available & (reliability: 552.0) & (original description: Putative At4g34180, Description = AT4g34180/F28A23_60, PFAM = PF04199)' T
'28.99' 'DNA.unspecified' 'niben101scf00113_461506-464042' '(at3g29765 : 198.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'niben101scf00142_152293-155246' '(at4g14465 : 183.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 354.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf00160_923996-928124' '(gnl|cdd|36337 : 398.0) no description available & (at3g42170 : 382.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 301.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 91.1) no description available & (reliability: 764.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF05699;PF02892;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf00163_316417-322504' '(at4g12050 : 130.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf00211_1348-4495' '(gnl|cdd|36337 : 188.0) no description available & (p08770|tra1_maize : 174.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 141.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative Os02g0237700, Description = Putative ovule protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf00220_518823-526023' '(at1g79890 : 914.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G79950.1); Has 2489 Blast hits to 1811 proteins in 412 species: Archae - 187; Bacteria - 188; Metazoa - 839; Fungi - 373; Plants - 265; Viruses - 5; Other Eukaryotes - 632 (source: NCBI BLink). & (gnl|cdd|36348 : 756.0) no description available & (gnl|cdd|70212 : 175.0) no description available & (reliability: 1828.0) & (original description: Putative BnaC02g47890D, Description = BnaC02g47890D protein, PFAM = PF13307;PF06733)' T
'28.99' 'DNA.unspecified' 'niben101scf00229_331869-334432' '(gnl|cdd|36337 : 109.0) no description available & (at3g42170 : 99.8) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 83.2) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 199.6) & (original description: Putative PGSC0003DMG400017498, Description = HAT family dimerisation domain containing protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf00247_285456-287794' '(at3g29763 : 118.0) General transcription factor 2-related zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 931 Blast hits to 894 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 1; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'niben101scf00304_574254-581446' '(at2g27110 : 1004.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2008.0) & (original description: Putative FRS3, Description = Protein FAR1-RELATED SEQUENCE 3, PFAM = PF04434;PF03101;PF10551;PF07258;PF07258)' T
'28.99' 'DNA.unspecified' 'niben101scf00317_636448-639128' '(at3g12410 : 100.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 93.2) no description available & (reliability: 191.8) & (original description: Putative Os01g0737600, Description = Os01g0737600 protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf00321_177412-184697' '(at3g19130 : 411.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 90.9) no description available & (p19683|roc4_nicsy : 81.6) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 822.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'niben101scf00332_103136-127317' '(at1g56310 : 611.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|37418 : 270.0) no description available & (gnl|cdd|85567 : 82.2) no description available & (reliability: 1222.0) & (original description: Putative BnaA09g15460D, Description = BnaA09g15460D protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf00332_103184-127308' '(at1g56310 : 566.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|37418 : 256.0) no description available & (gnl|cdd|85567 : 82.2) no description available & (reliability: 1132.0) & (original description: Putative BnaA09g15460D, Description = BnaA09g15460D protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf00389_59287-64972' '(at3g12560 : 346.0) Encodes a telomeric DNA-binding protein.; TRF-like 9 (TRFL9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: telomeric DNA binding protein 1 (TAIR:AT5G13820.1); Has 334 Blast hits to 327 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 306; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf00421_17902-24158' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 332.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF04434;PF03108)' T
'28.99' 'DNA.unspecified' 'niben101scf00440_224959-233329' '(at2g01970 : 985.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 873.0) no description available & (gnl|cdd|66650 : 622.0) no description available & (reliability: 1922.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf00456_14072-19667' '(at1g18090 : 503.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|37729 : 367.0) no description available & (gnl|cdd|29030 : 271.0) no description available & (q9sxq6|fen1a_orysa : 83.6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 1006.0) & (original description: Putative fenB, Description = Nuclease, Rad2 family, PFAM = PF00752;PF00867)' T
'28.99' 'DNA.unspecified' 'niben101scf00479_381213-386058' '(at1g23750 : 175.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf00504_362589-367947' '(at4g28190 : 316.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 590.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T
'28.99' 'DNA.unspecified' 'niben101scf00527_579798-588861' '(at2g45140 : 215.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 130.0) no description available & (gnl|cdd|84916 : 100.0) no description available & (reliability: 426.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'niben101scf00570_87901-92416' '(at3g25670 : 408.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 67019 Blast hits to 24561 proteins in 944 species: Archae - 25; Bacteria - 3248; Metazoa - 12033; Fungi - 537; Plants - 46926; Viruses - 0; Other Eukaryotes - 4250 (source: NCBI BLink). & (p93194|rpk1_iponi : 106.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 88.5) no description available & (reliability: 796.0) & (original description: Putative PII-2, Description = Piriformospora indica-insensitive protein 2, PFAM = PF13855;PF13855;PF00560)' T
'28.99' 'DNA.unspecified' 'niben101scf00571_706171-710265' '(at1g55290 : 498.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 287.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 185.0) no description available & (reliability: 978.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T
'28.99' 'DNA.unspecified' 'niben101scf00647_58012-61202' '(at1g11780 : 444.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT5G01780.2); Has 1304 Blast hits to 1304 proteins in 617 species: Archae - 0; Bacteria - 928; Metazoa - 100; Fungi - 94; Plants - 80; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37942 : 218.0) no description available & (gnl|cdd|32959 : 80.5) no description available & (reliability: 888.0) & (original description: Putative At1g11780, Description = Alpha-ketoglutarate-dependent dioxygenase alkB, PFAM = PF13532)' T
'28.99' 'DNA.unspecified' 'niben101scf00679_128285-130638' '(at3g21890 : 81.6) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative BnaC01g42110D, Description = BnaC01g42110D protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf00770_145391-148788' '(at3g42170 : 492.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 212.0) no description available & (p03010|trac9_maize : 125.0) Putative AC9 transposase - Zea mays (Maize) & (reliability: 984.0) & (original description: Putative Sb02g043380, Description = Putative uncharacterized protein Sb02g043380, PFAM = PF02892)' T
'28.99' 'DNA.unspecified' 'niben101scf00819_379897-384120' '(at2g40410 : 457.0) Staphylococcal nuclease homologue; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071); BEST Arabidopsis thaliana protein match is: Ca-2+ dependent nuclease (TAIR:AT3G56170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84867 : 125.0) no description available & (reliability: 826.0) & (original description: Putative CAN2, Description = Staphylococcal-like nuclease CAN2, PFAM = PF00565)' T
'28.99' 'DNA.unspecified' 'niben101scf00839_477271-483924' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf00861_517722-540680' '(at5g07710 : 133.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative ugu1, Description = Exonuclease, putative, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf00870_708393-714020' '(at5g66840 : 169.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'niben101scf00875_617511-621819' '(at3g42170 : 813.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 397.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1626.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF14372;PF05699;PF02892)' T
'28.99' 'DNA.unspecified' 'niben101scf00893_224847-233055' '(at2g21520 : 813.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1626.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF03765;PF00650)' T
'28.99' 'DNA.unspecified' 'niben101scf00955_566320-574611' '(at2g01970 : 883.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 782.0) no description available & (gnl|cdd|66650 : 557.0) no description available & (reliability: 1672.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf01025_772257-775069' '(gnl|cdd|36337 : 158.0) no description available & (p08770|tra1_maize : 152.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 122.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative BH1, Description = BnaC01g44680D protein, PFAM = PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf01027_61673-66677' '(at1g64260 : 154.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 82.3) no description available & (reliability: 304.0) & (original description: Putative At3g06940, Description = Putative mudrA protein, PFAM = PF00564;PF04434;PF03108;PF10551)' T
'28.99' 'DNA.unspecified' 'niben101scf01051_1098740-1101962' '(at2g45430 : 203.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 406.0) & (original description: Putative Os02g0448000, Description = Os02g0448000 protein, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf01062_791990-798033' '(at2g24170 : 994.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 916.0) no description available & (gnl|cdd|66650 : 679.0) no description available & (reliability: 1988.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf01119_315679-326031' '(at3g15080 : 301.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1777 Blast hits to 1777 proteins in 250 species: Archae - 0; Bacteria - 24; Metazoa - 732; Fungi - 619; Plants - 217; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|37460 : 202.0) no description available & (gnl|cdd|47785 : 126.0) no description available & (reliability: 602.0) & (original description: Putative v1g43493, Description = Predicted protein, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf01175_181469-208559' '(at5g28780 : 175.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|36205 : 153.0) no description available & (gnl|cdd|69490 : 138.0) no description available & (reliability: 338.0) & (original description: Putative BnaAnng39530D, Description = BnaAnng39530D protein, PFAM = PF05970;PF02689)' T
'28.99' 'DNA.unspecified' 'niben101scf01215_123066-132347' '(at5g15170 : 549.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 279.0) no description available & (gnl|cdd|87018 : 270.0) no description available & (reliability: 1098.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T
'28.99' 'DNA.unspecified' 'niben101scf01215_297779-301279' '(gnl|cdd|36337 : 172.0) no description available & (gnl|cdd|86928 : 106.0) no description available & (at3g42170 : 104.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 99.4) Putative AC9 transposase - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative Sb04g019795, Description = Putative uncharacterized protein Sb04g019795, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf01215_297794-313287' '(gnl|cdd|36337 : 267.0) no description available & (p08770|tra1_maize : 222.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 202.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 104.0) no description available & (reliability: 404.0) & (original description: Putative Os11g0613900, Description = HAT family dimerisation domain containing protein, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf01215_297962-301291' '(gnl|cdd|36337 : 236.0) no description available & (p08770|tra1_maize : 187.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 177.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 354.0) & (original description: Putative PGSC0003DMG400040321, Description = BED zinc finger,hAT family dimerization domain, putative, PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf01272_64325-69307' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf01272_74049-78164' '(at3g19184 : 136.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf01272_89094-95404' '(at5g42700 : 115.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400025791, Description = B3 domain-containing protein, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf01272_124471-127989' '(at3g19184 : 232.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative Os06g0194400, Description = B3 domain-containing protein Os06g0194400, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf01281_206566-216003' '(gnl|cdd|37891 : 738.0) no description available & (at5g67630 : 709.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31417 : 586.0) no description available & (reliability: 1300.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068)' T
'28.99' 'DNA.unspecified' 'niben101scf01295_407622-433441' '(at3g21430 : 842.0) ALWAYS EARLY 3 (ALY3); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT3G05380.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36237 : 218.0) no description available & (gnl|cdd|87115 : 141.0) no description available & (reliability: 1684.0) & (original description: Putative ALY3, Description = Protein ALWAYS EARLY 3, PFAM = PF00249;PF06584)' T
'28.99' 'DNA.unspecified' 'niben101scf01304_167886-175002' '(at3g13772 : 1089.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 930.0) no description available & (gnl|cdd|66650 : 666.0) no description available & (reliability: 2126.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf01383_776990-781565' '(at3g13610 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (o04847|dv4h_catro : 155.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 762.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'28.99' 'DNA.unspecified' 'niben101scf01383_913368-923370' '(at1g55290 : 348.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (q41452|fls_soltu : 167.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 696.0) & (original description: Putative BnaC02g04300D, Description = BnaC02g04300D protein, PFAM = PF03171;PF14226)' T
'28.99' 'DNA.unspecified' 'niben101scf01385_848406-855652' '(at1g47500 : 414.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 754.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'niben101scf01420_238008-242479' '(at1g68780 : 403.0) RNI-like superfamily protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G25670.1); Has 76880 Blast hits to 27020 proteins in 1013 species: Archae - 25; Bacteria - 5064; Metazoa - 15853; Fungi - 790; Plants - 50474; Viruses - 2; Other Eukaryotes - 4672 (source: NCBI BLink). & (p93194|rpk1_iponi : 117.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 89.3) no description available & (reliability: 806.0) & (original description: Putative BnaA07g27410D, Description = BnaA07g27410D protein, PFAM = PF13855;PF13855)' T
'28.99' 'DNA.unspecified' 'niben101scf01447_223180-250289' '(at2g25170 : 598.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|69954 : 149.0) no description available & (gnl|cdd|35605 : 122.0) no description available & (reliability: 1196.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06461;PF06465;PF08074)' T
'28.99' 'DNA.unspecified' 'niben101scf01447_234920-241766' '(at2g25170 : 340.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|69954 : 139.0) no description available & (reliability: 680.0) & (original description: Putative CHR6, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06461;PF06465)' T
'28.99' 'DNA.unspecified' 'niben101scf01451_512825-529273' '(at2g26970 : 283.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 254.0) no description available & (gnl|cdd|81545 : 233.0) no description available & (reliability: 566.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf01462_289172-292618' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf01509_242336-252861' '(at2g48100 : 337.0) Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37460 : 225.0) no description available & (gnl|cdd|47785 : 116.0) no description available & (reliability: 674.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf01513_188470-207622' '(at2g26970 : 287.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 257.0) no description available & (gnl|cdd|81545 : 234.0) no description available & (reliability: 574.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf01634_257846-274130' '(at3g57300 : 1826.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1238.0) no description available & (gnl|cdd|84584 : 293.0) no description available & (q7g8y3|isw2_orysa : 255.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3652.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00271;PF13892;PF00176)' T
'28.99' 'DNA.unspecified' 'niben101scf01634_258079-261686' '(at3g57300 : 171.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 161.0) no description available & (q7g8y3|isw2_orysa : 100.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 87.9) no description available & (reliability: 342.0) & (original description: Putative ino80, Description = DNA helicase INO80, PFAM = PF00271)' T
'28.99' 'DNA.unspecified' 'niben101scf01655_189706-192617' '(gnl|cdd|36337 : 146.0) no description available & (at3g42170 : 129.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 111.0) Putative AC9 transposase - Zea mays (Maize) & (gnl|cdd|86928 : 89.2) no description available & (reliability: 258.0) & (original description: Putative F13F21.1, Description = F13F21.1 protein, PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf01671_574036-584886' '(at1g49920 : 140.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.9) no description available & (reliability: 280.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF04434;PF03108;PF10551;PF00564)' T
'28.99' 'DNA.unspecified' 'niben101scf01731_13836-16495' '(at4g22810 : 182.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86345 : 129.0) no description available & (reliability: 360.0) & (original description: Putative AHL18, Description = AT-hook motif nuclear-localized protein 18, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf01812_86662-113019' '(at3g52390 : 534.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38230 : 314.0) no description available & (gnl|cdd|30053 : 221.0) no description available & (reliability: 1068.0) & (original description: Putative tatdn1, Description = Putative deoxyribonuclease TATDN1, PFAM = PF01026)' T
'28.99' 'DNA.unspecified' 'niben101scf01814_145657-151988' '(at5g66840 : 223.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'niben101scf01859_675529-678446' '(gnl|cdd|36337 : 200.0) no description available & (p08770|tra1_maize : 130.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 124.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400031209, Description = Os06g0470700 protein, PFAM = PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf01887_756672-763685' '(at1g47490 : 365.0) RNA-binding protein 47C (RBP47C); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C' (TAIR:AT1G47500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35370 : 127.0) no description available & (gnl|cdd|31068 : 96.3) no description available & (reliability: 714.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47C, PFAM = PF00076;PF00076;PF00076)' T
'28.99' 'DNA.unspecified' 'niben101scf01892_186729-190629' '(gnl|cdd|36337 : 400.0) no description available & (at3g42170 : 390.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 306.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 91.1) no description available & (reliability: 780.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF14372;PF02892;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf01964_1152913-1207579' '(gnl|cdd|39574 : 95.9) no description available & (at3g12410 : 92.4) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400042198, Description = 3'-5' exonuclease domain-containing protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf01976_76295-80480' '(at2g20825 : 200.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf01992_104650-108527' '(at2g20825 : 197.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf02014_121475-124299' '(at5g17570 : 405.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38230 : 205.0) no description available & (gnl|cdd|30053 : 203.0) no description available & (reliability: 810.0) & (original description: Putative BnaA10g17160D, Description = BnaA10g17160D protein, PFAM = PF01026)' T
'28.99' 'DNA.unspecified' 'niben101scf02066_185088-192853' '(at5g13820 : 389.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf02236_326323-332531' '(at3g13772 : 977.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 862.0) no description available & (gnl|cdd|66650 : 626.0) no description available & (reliability: 1914.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf02236_327165-330656' '(at3g13772 : 164.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 109.0) no description available & (reliability: 320.0) & (original description: Putative EMP1, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf02243_782319-798598' '(at4g32175 : 342.0) PNAS-3 related; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: PNAS-3 related (TAIR:AT2G25355.1); Has 535 Blast hits to 535 proteins in 248 species: Archae - 104; Bacteria - 0; Metazoa - 113; Fungi - 163; Plants - 59; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|36222 : 233.0) no description available & (gnl|cdd|31294 : 126.0) no description available & (reliability: 684.0) & (original description: Putative exosc3, Description = Putative exosome complex component rrp40, PFAM = PF15985)' T
'28.99' 'DNA.unspecified' 'niben101scf02255_78968-82064' '(at1g64260 : 86.3) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T
'28.99' 'DNA.unspecified' 'niben101scf02293_296263-299710' '(gnl|cdd|36337 : 198.0) no description available & (p08770|tra1_maize : 163.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 143.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 101.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400040321, Description = HAT family dimerisation domain containing protein, PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf02318_607251-613470' '(at3g15140 : 391.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35762 : 133.0) no description available & (reliability: 782.0) & (original description: Putative Sb10g012821, Description = Putative uncharacterized protein Sb10g012821, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf02363_87749-93126' '(at3g13772 : 1071.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 936.0) no description available & (gnl|cdd|66650 : 679.0) no description available & (reliability: 2090.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf02384_117731-121555' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf02390_218578-222669' '(at3g42170 : 405.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 399.0) no description available & (p08770|tra1_maize : 320.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 93.5) no description available & (reliability: 810.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF02892;PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf02407_774853-807969' '(gnl|cdd|36337 : 137.0) no description available & (p08770|tra1_maize : 115.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 111.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf02407_804884-808119' '(gnl|cdd|36337 : 232.0) no description available & (p08770|tra1_maize : 202.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 181.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative Os11g0613900, Description = Os11g0613900 protein, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf02500_89803-94725' '(at1g55290 : 298.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 190.0) no description available & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 125.0) no description available & (reliability: 594.0) & (original description: Putative Diox2, Description = Leucoanthocyanidin dioxygenase, putative, PFAM = PF03171)' T
'28.99' 'DNA.unspecified' 'niben101scf02730_20909-25279' '(at3g27970 : 519.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 293.0) no description available & (gnl|cdd|47785 : 114.0) no description available & (reliability: 1038.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf02794_171440-173811' '(at3g21890 : 89.7) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400026169, Description = B-box type zinc finger family protein, putative, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf02816_1694590-1697564' '(at2g45430 : 195.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 390.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf02832_203578-212067' '(at4g35220 : 337.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 115.0) no description available & (reliability: 674.0) & (original description: Putative TCM_007123, Description = Cyclase family protein, putative, PFAM = PF04199;PF04199)' T
'28.99' 'DNA.unspecified' 'niben101scf02853_365925-374346' '(at5g63190 : 1012.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 904.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 2024.0) & (original description: Putative MTR_4g104360, Description = Topoisomerase-like protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T
'28.99' 'DNA.unspecified' 'niben101scf02853_367392-372443' '(at4g24800 : 203.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T
'28.99' 'DNA.unspecified' 'niben101scf02853_401208-407351' '(at5g63190 : 928.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 852.0) no description available & (gnl|cdd|86147 : 124.0) no description available & (reliability: 1856.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T
'28.99' 'DNA.unspecified' 'niben101scf02860_235766-247870' '(at5g15170 : 799.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 447.0) no description available & (gnl|cdd|87018 : 405.0) no description available & (reliability: 1598.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T
'28.99' 'DNA.unspecified' 'niben101scf02860_239750-247699' '(at5g15170 : 488.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 261.0) no description available & (gnl|cdd|87018 : 252.0) no description available & (reliability: 976.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T
'28.99' 'DNA.unspecified' 'niben101scf02891_468122-473949' '(at2g27110 : 895.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86237 : 80.0) no description available & (reliability: 1790.0) & (original description: Putative FRS3, Description = Far1-related sequence 3-like protein, PFAM = PF04434;PF03101;PF10551)' T
'28.99' 'DNA.unspecified' 'niben101scf02909_310603-313499' '(at4g17800 : 218.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 404.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf02927_1064558-1066876' '(gnl|cdd|36337 : 102.0) no description available & (p03010|trac9_maize : 98.2) Putative AC9 transposase - Zea mays (Maize) & (gnl|cdd|86928 : 97.7) no description available & (at3g42170 : 88.2) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf03035_8262-12116' '(at2g33845 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative Os01g0754100, Description = DNA-binding protein-related-like, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf03171_331556-342435' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 99.3) no description available & (reliability: 286.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF03108;PF04434;PF10551;PF00564)' T
'28.99' 'DNA.unspecified' 'niben101scf03226_50114-53486' '(at2g45430 : 221.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 132.0) no description available & (reliability: 442.0) & (original description: Putative AHL24, Description = AT-hook motif nuclear-localized protein 24, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf03321_339506-342555' '(at3g17450 : 165.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 326.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T
'28.99' 'DNA.unspecified' 'niben101scf03337_731434-733982' '(at3g60600 : 119.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 90.3) no description available & (gnl|cdd|84916 : 80.4) no description available & (reliability: 238.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'niben101scf03371_255382-280304' '(at3g02060 : 1204.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 637.0) no description available & (gnl|cdd|35565 : 346.0) no description available & (reliability: 2408.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00270;PF00271;PF02559)' T
'28.99' 'DNA.unspecified' 'niben101scf03374_93916-100023' '(at2g45140 : 205.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 124.0) no description available & (gnl|cdd|84916 : 107.0) no description available & (reliability: 406.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'niben101scf03374_871204-879392' '(at1g63470 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 294.0) & (original description: Putative BnaCnng43040D, Description = BnaCnng43040D protein, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf03392_2344-58467' '(at3g52050 : 147.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 113.0) no description available & (reliability: 294.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF01367)' T
'28.99' 'DNA.unspecified' 'niben101scf03404_157970-174954' '(at3g52905 : 191.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, response to DNA damage stimulus, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 4393 Blast hits to 4393 proteins in 1559 species: Archae - 0; Bacteria - 3177; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 1190 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative GRF1, Description = GRF domain class transcription factor, PFAM = PF03652)' T
'28.99' 'DNA.unspecified' 'niben101scf03550_55737-68462' '(at1g48650 : 1545.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 966.0) no description available & (gnl|cdd|31829 : 467.0) no description available & (reliability: 3090.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF04408;PF07717;PF00270;PF00271)' T
'28.99' 'DNA.unspecified' 'niben101scf03565_206440-209228' '(at5g28780 : 202.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|36205 : 200.0) no description available & (gnl|cdd|69490 : 198.0) no description available & (reliability: 400.0) & (original description: Putative BnaC07g15370D, Description = BnaC07g15370D protein, PFAM = PF05970;PF02689)' T
'28.99' 'DNA.unspecified' 'niben101scf03565_650526-677571' '(at1g54490 : 1073.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 959.0) no description available & (gnl|cdd|34654 : 426.0) no description available & (reliability: 2146.0) & (original description: Putative XRN4, Description = 5'-3' exoribonuclease 4, PFAM = PF00098;PF03159)' T
'28.99' 'DNA.unspecified' 'niben101scf03576_205932-215833' '(at5g35970 : 1371.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink). & (gnl|cdd|37014 : 666.0) no description available & (gnl|cdd|31309 : 244.0) no description available & (reliability: 2742.0) & (original description: Putative At5g35970, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF13086)' T
'28.99' 'DNA.unspecified' 'niben101scf03595_701618-724355' '(at2g02090 : 987.0) ETL1; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to 16374 proteins in 2059 species: Archae - 127; Bacteria - 6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses - 219; Other Eukaryotes - 3503 (source: NCBI BLink). & (gnl|cdd|35610 : 675.0) no description available & (gnl|cdd|30899 : 278.0) no description available & (q7g8y3|isw2_orysa : 182.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1974.0) & (original description: Putative ETL1, Description = Protein CHROMATIN REMODELING 19, PFAM = PF00176;PF00271)' T
'28.99' 'DNA.unspecified' 'niben101scf03599_29117-32881' '(at1g12244 : 224.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination, response to DNA damage stimulus; LOCATED IN: endomembrane system, cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaC08g41380D, Description = BnaC08g41380D protein, PFAM = PF03652)' T
'28.99' 'DNA.unspecified' 'niben101scf03599_117079-134472' '(at2g45140 : 289.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 127.0) no description available & (gnl|cdd|84916 : 103.0) no description available & (reliability: 572.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'niben101scf03723_239417-251078' '(at2g32415 : 1043.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT5G35910.1). & (gnl|cdd|37417 : 267.0) no description available & (gnl|cdd|85567 : 173.0) no description available & (reliability: 2086.0) & (original description: Putative RRP6L3, Description = Protein RRP6-like 3, PFAM = PF01612;PF00570)' T
'28.99' 'DNA.unspecified' 'niben101scf03764_430269-434648' '(at5g26940 : 256.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39990 : 139.0) no description available & (gnl|cdd|47785 : 125.0) no description available & (reliability: 512.0) & (original description: Putative DPD1, Description = Exonuclease DPD1, chloroplastic/mitochondrial, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf03860_145484-174804' '(gnl|cdd|36337 : 130.0) no description available & (p03010|trac9_maize : 120.0) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 109.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 93.8) no description available & (reliability: 218.0) & (original description: Putative PGSC0003DMG400040321, Description = HAT dimerisation, PFAM = PF14372;PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf03917_62856-77151' '(at1g10930 : 1252.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (gnl|cdd|35572 : 621.0) no description available & (gnl|cdd|30860 : 528.0) no description available & (reliability: 2504.0) & (original description: Putative RECQL4A, Description = ATP-dependent DNA helicase Q-like 4A, PFAM = PF00570;PF16124;PF00270;PF00271;PF09382)' T
'28.99' 'DNA.unspecified' 'niben101scf03944_242521-245835' '(gnl|cdd|36337 : 101.0) no description available & (gnl|cdd|86928 : 90.8) no description available & (at3g42170 : 90.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 88.2) Putative AC9 transposase - Zea mays (Maize) & (reliability: 181.0) & (original description: Putative BnaC02g23230D, Description = BnaC02g23230D protein, PFAM = PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf03944_673424-676377' '(at3g55560 : 161.0) AT-hook protein of GA feedback 2 (AGF2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 804 Blast hits to 798 proteins in 45 species: Archae - 0; Bacteria - 14; Metazoa - 18; Fungi - 6; Plants - 758; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 306.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf03949_794536-799793' '(at1g71260 : 260.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 205.0) no description available & (reliability: 520.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T
'28.99' 'DNA.unspecified' 'niben101scf03962_299011-305047' '(at2g24170 : 999.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 926.0) no description available & (gnl|cdd|66650 : 676.0) no description available & (reliability: 1998.0) & (original description: Putative TMN10, Description = Transmembrane 9 superfamily member 10, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf03962_300863-303392' '(at2g24170 : 180.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 125.0) no description available & (gnl|cdd|66650 : 95.7) no description available & (reliability: 360.0) & (original description: Putative EMP1, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf04001_291425-302244' '(at2g03270 : 975.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|37014 : 697.0) no description available & (gnl|cdd|31309 : 283.0) no description available & (reliability: 1950.0) & (original description: Putative SMBP2, Description = SMBP2, PFAM = PF13087;PF13086)' T
'28.99' 'DNA.unspecified' 'niben101scf04078_142697-147617' '(at1g49920 : 135.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 86.5) no description available & (reliability: 270.0) & (original description: Putative At3g05850, Description = Putative ovule protein, PFAM = PF10551;PF03108;PF00564;PF04434)' T
'28.99' 'DNA.unspecified' 'niben101scf04109_497191-507412' '(at1g48650 : 161.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf04118_391216-395681' '(at3g13610 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04847|dv4h_catro : 189.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 962.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'28.99' 'DNA.unspecified' 'niben101scf04141_1-17230' '(at4g35740 : 844.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 503.0) no description available & (gnl|cdd|30860 : 450.0) no description available & (reliability: 1688.0) & (original description: Putative RECQL3, Description = ATP-dependent DNA helicase Q-like 3, PFAM = PF00270;PF00271;PF16124)' T
'28.99' 'DNA.unspecified' 'niben101scf04217_50693-56751' '(at3g60600 : 212.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 122.0) no description available & (gnl|cdd|84916 : 98.9) no description available & (reliability: 424.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T
'28.99' 'DNA.unspecified' 'niben101scf04276_104983-112515' '(at3g05740 : 791.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (gnl|cdd|35572 : 503.0) no description available & (gnl|cdd|30860 : 427.0) no description available & (reliability: 1582.0) & (original description: Putative RECQL1, Description = ATP-dependent DNA helicase Q-like 1, PFAM = PF00271;PF16124;PF00270)' T
'28.99' 'DNA.unspecified' 'niben101scf04382_75208-80810' '(at5g13820 : 366.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf04411_106578-124632' '(at3g57300 : 1681.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1188.0) no description available & (gnl|cdd|84584 : 294.0) no description available & (q7g8y3|isw2_orysa : 257.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3362.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00271;PF13892;PF00176)' T
'28.99' 'DNA.unspecified' 'niben101scf04487_70511-86838' '(at1g54490 : 236.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 190.0) no description available & (gnl|cdd|34654 : 145.0) no description available & (reliability: 472.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf04549_982837-985726' '(at1g19260 : 249.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T
'28.99' 'DNA.unspecified' 'niben101scf04675_139474-166163' '(at2g25910 : 535.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 183.0) no description available & (gnl|cdd|28891 : 103.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF01612;PF00013)' T
'28.99' 'DNA.unspecified' 'niben101scf04724_92741-97602' '(at1g64260 : 114.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.5) no description available & (reliability: 220.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF04434;PF10551)' T
'28.99' 'DNA.unspecified' 'niben101scf04742_203399-208840' '(at1g55290 : 356.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 274.0) no description available & (q41452|fls_soltu : 163.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 698.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T
'28.99' 'DNA.unspecified' 'niben101scf04827_38616-41239' '(gnl|cdd|39574 : 98.6) no description available & (at3g12410 : 92.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative Os01g0300000, Description = Os01g0300000 protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf04905_52938-65915' '(at1g27880 : 867.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (gnl|cdd|35572 : 407.0) no description available & (gnl|cdd|30860 : 333.0) no description available & (reliability: 1734.0) & (original description: Putative RECQL5, Description = ATP-dependent DNA helicase Q-like 5, PFAM = PF00271;PF00270)' T
'28.99' 'DNA.unspecified' 'niben101scf04953_406378-413576' '(at5g67240 : 406.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 230.0) no description available & (gnl|cdd|47785 : 106.0) no description available & (reliability: 812.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 1, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf04953_406830-412227' '(at5g67240 : 279.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 159.0) no description available & (reliability: 558.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 3, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf04992_193161-196539' '(at2g33845 : 168.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf05053_8160-14294' '(at5g63190 : 978.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 908.0) no description available & (gnl|cdd|86147 : 122.0) no description available & (reliability: 1956.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T
'28.99' 'DNA.unspecified' 'niben101scf05151_316574-319563' '(gnl|cdd|36337 : 126.0) no description available & (at3g42170 : 102.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 95.9) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf05160_13622-18661' '(at4g13870 : 231.0) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39574 : 120.0) no description available & (gnl|cdd|85567 : 83.4) no description available & (reliability: 462.0) & (original description: Putative WEX, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf05226_127037-129675' '(gnl|cdd|39574 : 95.5) no description available & (at4g13870 : 92.8) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative Os01g0660800, Description = Os01g0660800 protein, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf05272_347691-353167' '(at3g13772 : 1057.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 930.0) no description available & (gnl|cdd|66650 : 671.0) no description available & (reliability: 2054.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf05402_195873-201166' '(at4g28190 : 313.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 588.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T
'28.99' 'DNA.unspecified' 'niben101scf05413_647818-650502' '(gnl|cdd|36337 : 116.0) no description available & (at3g42170 : 95.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 95.5) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 95.0) no description available & (reliability: 191.0) & (original description: Putative BnaA02g11320D, Description = BnaA02g11320D protein, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf05434_230789-263559' '(at2g01440 : 1171.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31393 : 595.0) no description available & (gnl|cdd|35565 : 235.0) no description available & (reliability: 2342.0) & (original description: Putative RECG, Description = ATP-dependent DNA helicase homolog RECG, chloroplastic, PFAM = PF00271;PF00270)' T
'28.99' 'DNA.unspecified' 'niben101scf05468_73312-128599' '(at3g52050 : 473.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 270.0) no description available & (reliability: 946.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF02739;PF01367)' T
'28.99' 'DNA.unspecified' 'niben101scf05468_91571-101652' '(at3g52050 : 141.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 116.0) no description available & (reliability: 282.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF02739)' T
'28.99' 'DNA.unspecified' 'niben101scf05750_530279-537292' '(at5g63460 : 132.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 264.0) & (original description: Putative MTR_4g103580, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037;PF10172)' T
'28.99' 'DNA.unspecified' 'niben101scf05800_163535-195519' '(at2g25170 : 1680.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35605 : 721.0) no description available & (q7g8y3|isw2_orysa : 394.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 310.0) no description available & (reliability: 3360.0) & (original description: Putative PKL, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00628;PF08074;PF00176;PF00271;PF00385;PF00385;PF06461;PF06465)' T
'28.99' 'DNA.unspecified' 'niben101scf05811_19496-63560' '(at3g46960 : 1945.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 1316.0) no description available & (gnl|cdd|34219 : 706.0) no description available & (reliability: 3890.0) & (original description: Putative SKI2, Description = DExH-box ATP-dependent RNA helicase DExH11, PFAM = PF13234;PF00270;PF00271;PF08148)' T
'28.99' 'DNA.unspecified' 'niben101scf06016_207426-210288' '(at4g39810 : 320.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G74390.1); Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0; Bacteria - 1272; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|47785 : 98.5) no description available & (reliability: 640.0) & (original description: Putative NEN4, Description = Protein NEN4, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf06154_99066-104656' '(at1g71260 : 243.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 203.0) no description available & (reliability: 486.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T
'28.99' 'DNA.unspecified' 'niben101scf06156_447261-454936' '(at5g25100 : 998.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1). & (gnl|cdd|36492 : 897.0) no description available & (gnl|cdd|66650 : 668.0) no description available & (reliability: 1950.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf06200_291598-295943' '(at4g28440 : 177.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G33845.1); Has 214 Blast hits to 214 proteins in 47 species: Archae - 22; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf06203_97371-109838' '(at4g34490 : 663.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 494.0) no description available & (gnl|cdd|85310 : 209.0) no description available & (reliability: 1326.0) & (original description: Putative CAP1, Description = Cyclase-associated protein 1, PFAM = PF01213;PF08603)' T
'28.99' 'DNA.unspecified' 'niben101scf06369_296299-305587' '(at1g63470 : 161.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 119.0) no description available & (reliability: 312.0) & (original description: Putative AHL5, Description = AT-hook motif nuclear-localized protein 5, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf06618_118346-129810' '(at2g25910 : 409.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 154.0) no description available & (gnl|cdd|28891 : 95.1) no description available & (reliability: 818.0) & (original description: Putative PGSC0003DMG401002514, Description = Exonuclease 3'-5' domain-containing protein 1, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf06822_215350-219125' '(at4g17800 : 241.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 466.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf06976_720001-724036' '(at3g42170 : 624.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 377.0) no description available & (p08770|tra1_maize : 272.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 97.7) no description available & (reliability: 1248.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF05699;PF14372;PF02892)' T
'28.99' 'DNA.unspecified' 'niben101scf07008_222396-227100' '(at2g26970 : 277.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 250.0) no description available & (gnl|cdd|81545 : 234.0) no description available & (reliability: 554.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf07231_193045-202198' '(at5g61390 : 486.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G07710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47785 : 106.0) no description available & (reliability: 972.0) & (original description: Putative NEN2, Description = Protein NEN2, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf07402_198002-204290' '(at2g01970 : 946.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 871.0) no description available & (gnl|cdd|66650 : 614.0) no description available & (reliability: 1860.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf07563_65822-74313' '(at4g35220 : 400.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 123.0) no description available & (reliability: 800.0) & (original description: Putative At4g35220, Description = AT4g35220/F23E12_220, PFAM = PF04199)' T
'28.99' 'DNA.unspecified' 'niben101scf07590_410909-450737' '(gnl|cdd|37255 : 868.0) no description available & (at1g54490 : 848.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|34654 : 436.0) no description available & (reliability: 1696.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 4, PFAM = PF03159)' T
'28.99' 'DNA.unspecified' 'niben101scf07590_445081-450988' '(at1g54490 : 199.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 162.0) no description available & (gnl|cdd|34654 : 117.0) no description available & (reliability: 398.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf07984_190040-194778' '(at1g01150 : 84.7) Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative At1g01150, Description = BnaA06g30300D protein, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf08011_19202-30406' '(at1g14670 : 689.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT2G01970.1); Has 1574 Blast hits to 1525 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 610; Fungi - 249; Plants - 451; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36491 : 683.0) no description available & (gnl|cdd|66650 : 512.0) no description available & (reliability: 1334.0) & (original description: Putative sigC, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T
'28.99' 'DNA.unspecified' 'niben101scf08478_563778-566302' '(gnl|cdd|36337 : 107.0) no description available & (gnl|cdd|86928 : 102.0) no description available & (p03010|trac9_maize : 98.2) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 85.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative Sb04g019795, Description = Putative uncharacterized protein Sb04g019795, PFAM = PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf08590_264720-272033' '(at5g24340 : 611.0) 3'-5' exonuclease domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF82 (InterPro:IPR002782), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G56310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37418 : 224.0) no description available & (gnl|cdd|31842 : 104.0) no description available & (reliability: 1222.0) & (original description: Putative At5g24340, Description = 3'-5' exonuclease domain-containing protein, PFAM = PF01612;PF01927)' T
'28.99' 'DNA.unspecified' 'niben101scf08653_158925-178568' '(at1g48650 : 1571.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 966.0) no description available & (gnl|cdd|31829 : 463.0) no description available & (reliability: 3142.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF04408;PF00271;PF07717;PF00035)' T
'28.99' 'DNA.unspecified' 'niben101scf08665_378148-383588' '(at2g45850 : 173.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 346.0) & (original description: Putative AHL9, Description = AT-hook motif nuclear-localized protein 9, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf09189_173621-176567' '(at2g45430 : 222.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 139.0) no description available & (reliability: 444.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf09268_32114-40148' '(at4g34490 : 619.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 487.0) no description available & (gnl|cdd|85310 : 202.0) no description available & (reliability: 1238.0) & (original description: Putative cap1, Description = Adenylyl cyclase-associated protein, PFAM = PF08603;PF01213)' T
'28.99' 'DNA.unspecified' 'niben101scf09416_126132-134771' '(at2g45850 : 100.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF03479)' T
'28.99' 'DNA.unspecified' 'niben101scf09552_153854-156833' '(gnl|cdd|39574 : 114.0) no description available & (at2g36110 : 104.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 463 Blast hits to 452 proteins in 93 species: Archae - 0; Bacteria - 28; Metazoa - 189; Fungi - 6; Plants - 216; Viruses - 3; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative Sb03g030190, Description = Putative uncharacterized protein Sb03g030190, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf09767_108148-112506' '(at1g49920 : 88.2) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF03108;PF04434)' T
'28.99' 'DNA.unspecified' 'niben101scf09773_185987-191367' '(at5g13820 : 384.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf09811_25231-29634' '(at1g52950 : 91.7) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Protein of unknown function DUF223 (InterPro:IPR003871), Replication factor A, C-terminal (InterPro:IPR013955); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05642.1); Has 1159 Blast hits to 1070 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 144; Plants - 865; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|72948 : 91.1) no description available & (reliability: 183.4) & (original description: Putative , Description = , PFAM = PF08646)' T
'28.99' 'DNA.unspecified' 'niben101scf10202_21837-27197' '(at3g61620 : 362.0) exonuclease RRP41 (RRP41); RRP41; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36286 : 293.0) no description available & (gnl|cdd|81244 : 260.0) no description available & (reliability: 724.0) & (original description: Putative RRP41, Description = Exosome complex component RRP41 homolog, PFAM = PF03725;PF01138)' T
'28.99' 'DNA.unspecified' 'niben101scf10202_23446-27044' '(at3g61620 : 171.0) exonuclease RRP41 (RRP41); RRP41; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36286 : 162.0) no description available & (gnl|cdd|81244 : 154.0) no description available & (reliability: 342.0) & (original description: Putative rph, Description = Exosome complex component Rrp41, PFAM = PF01138)' T
'28.99' 'DNA.unspecified' 'niben101scf10381_111446-128508' '(at1g22260 : 461.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 90.3) no description available & (reliability: 894.0) & (original description: Putative ZEP1, Description = Synaptonemal complex protein 1, PFAM = )' T
'28.99' 'DNA.unspecified' 'niben101scf10431_113236-120554' '(gnl|cdd|35762 : 212.0) no description available & (gnl|cdd|34623 : 122.0) no description available & (at3g15140 : 82.8) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative eri2, Description = ERI1 exoribonuclease 2, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf10502_68689-72582' '(at1g55290 : 453.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 284.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 906.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T
'28.99' 'DNA.unspecified' 'niben101scf10608_281081-286176' '(at4g13870 : 235.0) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39574 : 119.0) no description available & (gnl|cdd|47780 : 80.5) no description available & (reliability: 470.0) & (original description: Putative WEX, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf12361_421336-428514' '(at5g67240 : 299.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 187.0) no description available & (gnl|cdd|47785 : 107.0) no description available & (reliability: 598.0) & (original description: Putative SDN4, Description = Putative small RNA degrading nuclease 4, PFAM = PF00929)' T
'28.99' 'DNA.unspecified' 'niben101scf12628_154887-170194' '(at2g25910 : 535.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 183.0) no description available & (gnl|cdd|28891 : 102.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF00013;PF01612)' T
'28.99' 'DNA.unspecified' 'niben101scf12754_118022-121543' '(gnl|cdd|86928 : 95.0) no description available & (gnl|cdd|36337 : 93.0) no description available & (p03010|trac9_maize : 85.1) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 81.6) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative BnaA02g11320D, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T
'28.99' 'DNA.unspecified' 'niben101scf12928_146945-151031' '(at5g42700 : 191.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative At5g42700, Description = B3 domain-containing protein At5g42700, PFAM = PF02362)' T
'28.99' 'DNA.unspecified' 'niben101scf12983_138970-149038' '(at5g35970 : 1361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink). & (gnl|cdd|37014 : 658.0) no description available & (gnl|cdd|31309 : 244.0) no description available & (reliability: 2722.0) & (original description: Putative At5g35970, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T
'28.99' 'DNA.unspecified' 'niben101scf13601_43974-78447' '(at2g01130 : 1509.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 963.0) no description available & (gnl|cdd|83738 : 325.0) no description available & (reliability: 2850.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF00271;PF07717;PF04408;PF00270)' T
'28.99' 'DNA.unspecified' 'niben101scf13601_44210-67615' '(at2g01130 : 1176.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 868.0) no description available & (gnl|cdd|83738 : 310.0) no description available & (reliability: 2210.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF04408;PF07717)' T
'28.99' 'DNA.unspecified' 'niben101scf14564_15160-19514' '(at3g42170 : 820.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 397.0) no description available & (p08770|tra1_maize : 279.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1640.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF05699;PF02892;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf17730_2564-26533' '(at2g30800 : 1301.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 465.0) no description available & (gnl|cdd|31829 : 274.0) no description available & (reliability: 2344.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF00271;PF01424)' T
'28.99' 'DNA.unspecified' 'niben101scf18985_82998-86393' '(gnl|cdd|36337 : 234.0) no description available & (p08770|tra1_maize : 196.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 182.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 364.0) & (original description: Putative Os11g0613900, Description = 93317-95488, PFAM = PF05699;PF14372)' T
'28.99' 'DNA.unspecified' 'niben101scf19230_120956-126206' '(at5g63460 : 97.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 194.8) & (original description: Putative BnaC02g42530D, Description = BnaC02g42530D protein, PFAM = PF02037)' T
'28.99' 'DNA.unspecified' 'niben101scf20097_72256-80958' '(at2g21520 : 872.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 137.0) no description available & (reliability: 1744.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T
'28.99' 'DNA.unspecified' 'niben101scf25633_70475-87017' '(gnl|cdd|30860 : 523.0) no description available & (gnl|cdd|35572 : 419.0) no description available & (at1g60930 : 313.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF00271;PF00570;PF14493;PF00270;PF09382;PF16124)' T
'29' 'protein' '' ''
'29.1' 'protein.aa activation' 'nbv0.3scaffold9245_2425-12126' '(at1g18950 : 543.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 1086.0) & (original description: Putative DDR4, Description = DDT domain-containing protein DDR4, PFAM = PF02791)' T
'29.1' 'protein.aa activation' 'nbv0.3scaffold53694_4204-10186' '(at1g09150 : 279.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|37734 : 260.0) no description available & (gnl|cdd|32199 : 122.0) no description available & (reliability: 558.0) & (original description: Putative Mcts1, Description = Malignant T-cell-amplified sequence 1, PFAM = PF01472)' T
'29.1' 'protein.aa activation' 'nbv0.3scaffold68477_1-8128' '(at3g04600 : 249.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 239.0) no description available & (gnl|cdd|84053 : 116.0) no description available & (reliability: 498.0) & (original description: Putative trpS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'nbv0.5scaffold315_285712-295818' '(at4g27490 : 150.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative SLG, Description = 3' exoribonuclease domain 1-containing family protein, PFAM = PF03725;PF01138)' T
'29.1' 'protein.aa activation' 'nbv0.5scaffold1228_159003-221985' '(gnl|cdd|37356 : 451.0) no description available & (at3g04600 : 448.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|84053 : 224.0) no description available & (reliability: 896.0) & (original description: Putative WARS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'nbv0.5scaffold5454_28015-30844' '(at1g18950 : 126.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T
'29.1' 'protein.aa activation' 'nbv0.5scaffold6812_11511-17532' '(at5g56090 : 587.0) Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.; cytochrome c oxidase 15 (COX15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome oxidase assembly (InterPro:IPR003780); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37936 : 482.0) no description available & (gnl|cdd|31800 : 185.0) no description available & (reliability: 1174.0) & (original description: Putative COX15, Description = Cytochrome c oxidase assembly protein COX15, PFAM = PF02628)' T
'29.1' 'protein.aa activation' 'niben044scf00005589ctg002_13468-17306' '(gnl|cdd|38318 : 121.0) no description available & (at2g24490 : 119.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72950 : 84.9) no description available & (reliability: 216.0) & (original description: Putative rfa, Description = Putative Replication protein A 30 kDa subunit, PFAM = PF01336)' T
'29.1' 'protein.aa activation' 'niben044scf00010162ctg000_7834-17555' '(at1g18950 : 261.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T
'29.1' 'protein.aa activation' 'niben044scf00030289ctg001_10489-13664' '(at3g04600 : 251.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 236.0) no description available & (gnl|cdd|84053 : 118.0) no description available & (reliability: 502.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben044scf00040852ctg007_1-4761' '(at3g04600 : 120.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 113.0) no description available & (reliability: 240.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben044scf00043979ctg001_1-9934' '(at2g40660 : 336.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (gnl|cdd|37452 : 200.0) no description available & (q9zts1|sym_orysa : 153.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|48401 : 152.0) no description available & (reliability: 672.0) & (original description: Putative metG, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T
'29.1' 'protein.aa activation' 'niben101scf00024_227792-237455' '(at1g18950 : 547.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 1094.0) & (original description: Putative DDR4, Description = DDT domain-containing protein DDR4, PFAM = PF02791;PF15612)' T
'29.1' 'protein.aa activation' 'niben101scf00298_183699-191910' '(at3g04600 : 503.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 500.0) no description available & (gnl|cdd|84053 : 260.0) no description available & (reliability: 1006.0) & (original description: Putative WARS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben101scf00369_1768254-1780543' '(at1g09150 : 291.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|37734 : 272.0) no description available & (gnl|cdd|32199 : 124.0) no description available & (reliability: 582.0) & (original description: Putative Mcts1, Description = Malignant T-cell-amplified sequence 1, PFAM = PF01472)' T
'29.1' 'protein.aa activation' 'niben101scf00773_277972-286757' '(at2g40660 : 340.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (gnl|cdd|37452 : 197.0) no description available & (q9zts1|sym_orysa : 160.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|48401 : 153.0) no description available & (reliability: 680.0) & (original description: Putative metG, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T
'29.1' 'protein.aa activation' 'niben101scf00988_263299-275754' '(at4g27490 : 354.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (gnl|cdd|81244 : 163.0) no description available & (gnl|cdd|36286 : 155.0) no description available & (reliability: 708.0) & (original description: Putative RRP41L, Description = Exosome complex component RRP41-like, PFAM = PF01138;PF03725)' T
'29.1' 'protein.aa activation' 'niben101scf01429_52520-65849' '(at3g02920 : 223.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (gnl|cdd|38318 : 200.0) no description available & (gnl|cdd|34832 : 120.0) no description available & (reliability: 446.0) & (original description: Putative rfa, Description = Putative replication factor A, PFAM = PF08784)' T
'29.1' 'protein.aa activation' 'niben101scf01438_435323-442888' '(at2g24490 : 218.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38318 : 185.0) no description available & (gnl|cdd|34832 : 130.0) no description available & (reliability: 408.0) & (original description: Putative RPA2A, Description = Replication protein A 32 kDa subunit A, PFAM = PF01336;PF08784)' T
'29.1' 'protein.aa activation' 'niben101scf01779_98107-110983' '(at3g04600 : 671.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 643.0) no description available & (gnl|cdd|84053 : 327.0) no description available & (reliability: 1342.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben101scf01779_98712-101430' '(at3g04600 : 150.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 136.0) no description available & (gnl|cdd|84053 : 80.3) no description available & (reliability: 300.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = )' T
'29.1' 'protein.aa activation' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 252.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T
'29.1' 'protein.aa activation' 'niben101scf02399_496288-505184' '(at5g56090 : 634.0) Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.; cytochrome c oxidase 15 (COX15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome oxidase assembly (InterPro:IPR003780); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37936 : 512.0) no description available & (gnl|cdd|31800 : 201.0) no description available & (reliability: 1268.0) & (original description: Putative COX15, Description = Cytochrome c oxidase assembly protein COX15, PFAM = PF02628)' T
'29.1' 'protein.aa activation' 'niben101scf05688_313968-319322' '(at1g31340 : 183.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 139.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 138.0) no description available & (gnl|cdd|35227 : 134.0) no description available & (reliability: 334.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T
'29.1' 'protein.aa activation' 'niben101scf06290_189444-202454' '(at2g25840 : 517.0) ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80780 : 508.0) no description available & (gnl|cdd|37924 : 445.0) no description available & (reliability: 1034.0) & (original description: Putative OVA4, Description = Tryptophan--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben101scf06698_217787-232459' '(at2g25840 : 512.0) ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80780 : 509.0) no description available & (gnl|cdd|37924 : 439.0) no description available & (reliability: 1024.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, PFAM = PF00579)' T
'29.1' 'protein.aa activation' 'niben101scf07147_270338-280413' '(at1g18950 : 261.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T
'29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'nbv0.5scaffold1793_402716-407639' '(at2g33840 : 157.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 113.0) no description available & (gnl|cdd|82676 : 86.4) no description available & (reliability: 314.0) & (original description: Putative tyrS, Description = Tyrosyl-tRNA synthetase, PFAM = PF00579)' T
'29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf02379_256163-261875' '(at2g33840 : 155.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 112.0) no description available & (gnl|cdd|82676 : 84.1) no description available & (reliability: 310.0) & (original description: Putative tyrS, Description = Tyrosine-tRNA ligase, PFAM = PF00579)' T
'29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf04955_792527-796318' '(at1g28350 : 90.9) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tyrosyl-tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (TAIR:AT2G33840.1); Has 6761 Blast hits to 4745 proteins in 1539 species: Archae - 718; Bacteria - 3084; Metazoa - 577; Fungi - 521; Plants - 241; Viruses - 10; Other Eukaryotes - 1610 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative TYRS, Description = Tyrosyl-tRNA synthetase, PFAM = )' T
'29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf10575_151058-159123' '(at2g33840 : 583.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 432.0) no description available & (gnl|cdd|82676 : 319.0) no description available & (reliability: 1166.0) & (original description: Putative tyrS, Description = Tyrosyl-tRNA synthetase, PFAM = PF00579)' T
'29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf11408_138930-142492' '(at3g02660 : 631.0) EMBRYO DEFECTIVE 2768 (emb2768); FUNCTIONS IN: RNA binding, tyrosine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), RNA-binding S4 (InterPro:IPR002942), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9022 Blast hits to 9013 proteins in 2715 species: Archae - 16; Bacteria - 5542; Metazoa - 116; Fungi - 145; Plants - 38; Viruses - 0; Other Eukaryotes - 3165 (source: NCBI BLink). & (gnl|cdd|37834 : 503.0) no description available & (gnl|cdd|81792 : 414.0) no description available & (reliability: 1262.0) & (original description: Putative tyrS, Description = Tyrosine--tRNA ligase, PFAM = PF01479;PF00579)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'nbv0.3scaffold8489_49710-53208' '(at5g26830 : 286.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|36850 : 261.0) no description available & (gnl|cdd|80656 : 226.0) no description available & (reliability: 572.0) & (original description: Putative tars, Description = Threonyl-tRNA synthetase, PFAM = PF03129;PF00587)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben044scf00032031ctg006_1-2130' '(gnl|cdd|36850 : 299.0) no description available & (at5g26830 : 298.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 249.0) no description available & (reliability: 596.0) & (original description: Putative v1g151543, Description = Predicted protein, PFAM = PF03129;PF00587)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf01037_943410-958877' '(at2g04842 : 1081.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 877.0) no description available & (gnl|cdd|36850 : 418.0) no description available & (reliability: 2162.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF03129;PF07973)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf01037_945146-949085' '(at2g04842 : 416.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 357.0) no description available & (gnl|cdd|36850 : 158.0) no description available & (reliability: 832.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF07973)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf03099_79213-99277' '(at5g26830 : 1061.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 766.0) no description available & (gnl|cdd|36850 : 684.0) no description available & (reliability: 2122.0) & (original description: Putative THRRS, Description = Threonine--tRNA ligase, mitochondrial 1, PFAM = PF00587;PF07973;PF03129;PF02824)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf03563_167804-177579' '(at2g04842 : 1076.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 870.0) no description available & (gnl|cdd|36850 : 423.0) no description available & (reliability: 2152.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF03129;PF07973)' T
'29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf06734_224513-236143' '(at5g26830 : 780.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 550.0) no description available & (gnl|cdd|36850 : 425.0) no description available & (reliability: 1560.0) & (original description: Putative tars, Description = Threonyl-tRNA synthetase, PFAM = PF07973;PF02824;PF00587)' T
'29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben044scf00019380ctg014_26448-37077' '(at4g04350 : 1425.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (gnl|cdd|80643 : 1265.0) no description available & (gnl|cdd|35656 : 971.0) no description available & (reliability: 2850.0) & (original description: Putative leuS, Description = Leucine--tRNA ligase, PFAM = PF08264;PF09334;PF13603;PF00133;PF00133)' T
'29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf00758_675831-682526' '(at1g09620 : 1534.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1443.0) no description available & (gnl|cdd|84063 : 651.0) no description available & (reliability: 3068.0) & (original description: Putative SYLC, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T
'29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf02145_702150-713772' '(at4g04350 : 1424.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (gnl|cdd|80643 : 1272.0) no description available & (gnl|cdd|35656 : 978.0) no description available & (reliability: 2848.0) & (original description: Putative leuS, Description = Leucine--tRNA ligase, PFAM = PF08264;PF00133;PF13603;PF09334)' T
'29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf05005_533412-539130' '(at1g09620 : 1110.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1024.0) no description available & (gnl|cdd|84063 : 517.0) no description available & (reliability: 2220.0) & (original description: Putative lars, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF00133;PF08264)' T
'29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf13857_98875-104114' '(at1g09620 : 1527.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1451.0) no description available & (gnl|cdd|84063 : 671.0) no description available & (reliability: 3054.0) & (original description: Putative lars, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.3scaffold9634_34156-36725' '(at1g65870 : 194.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 358.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.5scaffold211_635799-675212' '(at5g49030 : 1463.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (gnl|cdd|81722 : 1114.0) no description available & (gnl|cdd|35654 : 1078.0) no description available & (reliability: 2926.0) & (original description: Putative ileS, Description = Isoleucine--tRNA ligase, PFAM = PF00133;PF06827;PF08264)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.5scaffold665_374347-430871' '(at1g58170 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 138.0) no description available & (reliability: 286.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben044scf00010763ctg010_14428-17748' '(at1g65870 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 142.0) no description available & (reliability: 286.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf00426_148397-183619' '(at4g10320 : 1894.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (gnl|cdd|35655 : 1571.0) no description available & (gnl|cdd|81821 : 1223.0) no description available & (reliability: 3788.0) & (original description: Putative iars, Description = Isoleucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf02995_56152-81736' '(at4g10320 : 1876.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (gnl|cdd|35655 : 1568.0) no description available & (gnl|cdd|81821 : 1221.0) no description available & (reliability: 3752.0) & (original description: Putative iars, Description = Isoleucine--tRNA ligase, cytoplasmic, PFAM = PF00133;PF00133;PF08264)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf05872_227625-230194' '(at1g65870 : 196.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 358.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T
'29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf07677_55653-91740' '(at5g49030 : 1659.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (gnl|cdd|81722 : 1231.0) no description available & (gnl|cdd|35654 : 1160.0) no description available & (reliability: 3318.0) & (original description: Putative OVA2, Description = Isoleucine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF08264;PF00133;PF06827)' T
'29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'nbv0.3scaffold115256_1-2511' '(at3g13490 : 300.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 236.0) no description available & (gnl|cdd|37096 : 212.0) no description available & (q6f2u9|syk_orysa : 111.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 600.0) & (original description: Putative cmk11, Description = Lysyl-tRNA synthetase, PFAM = PF00152)' T
'29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf00182_402002-416023' '(q6f2u9|syk_orysa : 672.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 651.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (gnl|cdd|37096 : 618.0) no description available & (gnl|cdd|29820 : 519.0) no description available & (reliability: 1302.0) & (original description: Putative kars, Description = Lysine--tRNA ligase, PFAM = PF00152)' T
'29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf01673_73099-82884' '(q6f2u9|syk_orysa : 883.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 868.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (gnl|cdd|37096 : 790.0) no description available & (gnl|cdd|31383 : 603.0) no description available & (reliability: 1736.0) & (original description: Putative kars, Description = Lysine--tRNA ligase, PFAM = PF00152;PF01336)' T
'29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf03323_154854-189735' '(at3g13490 : 855.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 683.0) no description available & (gnl|cdd|37096 : 620.0) no description available & (q6f2u9|syk_orysa : 327.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1710.0) & (original description: Putative lysS, Description = Lysine--tRNA ligase, PFAM = PF00152;PF01336)' T
'29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf05216_849805-882190' '(at3g13490 : 853.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 680.0) no description available & (gnl|cdd|37096 : 621.0) no description available & (q6f2u9|syk_orysa : 327.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1706.0) & (original description: Putative OVA5, Description = Lysine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00152;PF01336)' T
'29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf03913_201355-213793' '(at5g22800 : 1246.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (gnl|cdd|80592 : 1071.0) no description available & (gnl|cdd|35409 : 607.0) no description available & (reliability: 2492.0) & (original description: Putative alaS, Description = Alanine--tRNA ligase, PFAM = PF07973;PF01411;PF02272)' T
'29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf08047_123461-136672' '(at5g22800 : 1239.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (gnl|cdd|80592 : 1078.0) no description available & (gnl|cdd|35409 : 610.0) no description available & (reliability: 2478.0) & (original description: Putative alaS, Description = Alanine--tRNA ligase, PFAM = PF07973;PF01411;PF02272)' T
'29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf12983_265556-281937' '(at1g50200 : 1422.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (gnl|cdd|35409 : 1035.0) no description available & (gnl|cdd|80592 : 892.0) no description available & (reliability: 2844.0) & (original description: Putative ALATS, Description = Alanine--tRNA ligase, PFAM = PF01411;PF02272;PF07973)' T
'29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf21813_57441-73523' '(at1g50200 : 1419.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (gnl|cdd|35409 : 1027.0) no description available & (gnl|cdd|80592 : 883.0) no description available & (reliability: 2838.0) & (original description: Putative ala1, Description = Alanine--tRNA ligase, PFAM = PF01411;PF07973;PF02272)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'nbv0.5scaffold307_267992-280665' '(at1g14610 : 1122.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1026.0) no description available & (gnl|cdd|81717 : 748.0) no description available & (reliability: 2244.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF08264;PF00133)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'nbv0.5scaffold4013_65934-88793' '(at1g14610 : 1452.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1299.0) no description available & (gnl|cdd|81717 : 1013.0) no description available & (reliability: 2904.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF00133;PF08264)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben044scf00005744ctg023_1-19314' '(at5g16715 : 730.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 520.0) no description available & (gnl|cdd|35653 : 448.0) no description available & (reliability: 1460.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF08264;PF00133;PF00133)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben044scf00029001ctg002_7317-13092' '(at1g14610 : 596.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 581.0) no description available & (gnl|cdd|81717 : 493.0) no description available & (reliability: 1192.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF00133)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf02190_303270-368182' '(at5g16715 : 1543.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 1216.0) no description available & (gnl|cdd|35653 : 1114.0) no description available & (reliability: 3086.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF00133;PF08264)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf05486_5773-29581' '(at1g14610 : 1507.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1356.0) no description available & (gnl|cdd|81717 : 1058.0) no description available & (reliability: 3014.0) & (original description: Putative valS1, Description = Probable valine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf06397_415086-439717' '(at1g14610 : 1512.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1360.0) no description available & (gnl|cdd|81717 : 1065.0) no description available & (reliability: 3024.0) & (original description: Putative TWN2, Description = Valine--tRNA ligase, mitochondrial 1, PFAM = PF00133;PF08264)' T
'29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf12708_200728-262220' '(at5g16715 : 1553.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 1223.0) no description available & (gnl|cdd|35653 : 1120.0) no description available & (reliability: 3106.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF08264;PF00133)' T
'29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf01146_900657-911397' '(q9zts1|sym_orysa : 1314.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 1313.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (gnl|cdd|36461 : 860.0) no description available & (gnl|cdd|80537 : 664.0) no description available & (reliability: 2626.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF01588;PF09334)' T
'29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf01171_874311-886650' '(q9zts1|sym_orysa : 1313.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 1309.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (gnl|cdd|36461 : 858.0) no description available & (gnl|cdd|80537 : 664.0) no description available & (reliability: 2618.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF09334;PF01588)' T
'29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf03306_123892-141557' '(at4g13780 : 1292.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 1263.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|36461 : 850.0) no description available & (gnl|cdd|80537 : 663.0) no description available & (reliability: 2584.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF09334;PF01588)' T
'29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf03306_130256-137797' '(at4g13780 : 556.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 530.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|36461 : 497.0) no description available & (gnl|cdd|84042 : 376.0) no description available & (reliability: 1112.0) & (original description: Putative mars, Description = Methionyl-tRNA synthetase, PFAM = PF09334)' T
'29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf10015_40098-54669' '(at3g55400 : 917.0) OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins in 3001 species: Archae - 930; Bacteria - 15835; Metazoa - 410; Fungi - 530; Plants - 181; Viruses - 3; Other Eukaryotes - 7011 (source: NCBI BLink). & (gnl|cdd|35657 : 698.0) no description available & (gnl|cdd|84023 : 657.0) no description available & (q9zts1|sym_orysa : 174.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 1834.0) & (original description: Putative OVA1, Description = Methionine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF09334;PF08264)' T
'29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben044scf00009456ctg019_6095-13012' '(at1g11870 : 665.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37720 : 491.0) no description available & (gnl|cdd|81585 : 474.0) no description available & (o81983|sys_helan : 223.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1330.0) & (original description: Putative OVA7, Description = Serine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00587;PF02403)' T
'29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf00370_506174-520003' '(o81983|sys_helan : 751.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (at5g27470 : 712.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37720 : 608.0) no description available & (gnl|cdd|81585 : 476.0) no description available & (reliability: 1424.0) & (original description: Putative serS, Description = Serine--tRNA ligase, cytoplasmic, PFAM = PF00587;PF02403)' T
'29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf02367_624293-634292' '(at1g11870 : 686.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37720 : 498.0) no description available & (gnl|cdd|81585 : 481.0) no description available & (o81983|sys_helan : 230.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1372.0) & (original description: Putative OVA7, Description = Serine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00587;PF02403)' T
'29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf10053_139656-148942' '(o81983|sys_helan : 751.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (at5g27470 : 717.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37720 : 610.0) no description available & (gnl|cdd|81585 : 474.0) no description available & (reliability: 1434.0) & (original description: Putative sars, Description = Seryl-tRNA synthetase, PFAM = PF00587;PF02403)' T
'29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'nbv0.5scaffold4254_95677-110728' '(gnl|cdd|35776 : 736.0) no description available & (at4g31180 : 716.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink). & (gnl|cdd|29821 : 409.0) no description available & (q6f2u9|syk_orysa : 81.6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative IBI1, Description = Aspartate--tRNA ligase 2, cytoplasmic, PFAM = PF00152;PF01336)' T
'29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'niben101scf00953_599768-612660' '(at4g33760 : 983.0) tRNA synthetase class II (D, K and N) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (InterPro:IPR004524), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal (InterPro:IPR018153), GAD domain (InterPro:IPR004115); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|80684 : 853.0) no description available & (gnl|cdd|37622 : 736.0) no description available & (reliability: 1966.0) & (original description: Putative aspS, Description = Aspartyl-tRNA synthetase, PFAM = PF00152;PF02938;PF01336)' T
'29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'niben101scf04487_689101-698393' '(gnl|cdd|35776 : 741.0) no description available & (at4g31180 : 720.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink). & (gnl|cdd|29821 : 417.0) no description available & (q6f2u9|syk_orysa : 85.5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1440.0) & (original description: Putative dars, Description = MGC80207 protein, PFAM = PF01336;PF00152)' T
'29.1.13' 'protein.aa activation.tryptophan-tRNA ligase' '' ''
'29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'nbv0.5scaffold4293_109937-116911' '(at1g29880 : 1004.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 833.0) no description available & (gnl|cdd|30772 : 596.0) no description available & (reliability: 2008.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF00587;PF03129)' T
'29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf01818_549334-559267' '(at1g29880 : 1106.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 874.0) no description available & (gnl|cdd|30772 : 640.0) no description available & (reliability: 2212.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF00587;PF03129;PF00458)' T
'29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf02407_1417777-1480171' '(at3g48110 : 1501.0) glycine-tRNA ligase; EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS IN: glycine-tRNA ligase activity; INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal (InterPro:IPR002311), Glycyl-tRNA synthetase, class II, heterodimeric (InterPro:IPR006194), Glycyl-tRNA synthetase, class IIc, beta subunit (InterPro:IPR015944), Glycyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR002310); Has 11308 Blast hits to 11293 proteins in 1754 species: Archae - 4; Bacteria - 6864; Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 4395 (source: NCBI BLink). & (gnl|cdd|80846 : 636.0) no description available & (reliability: 3002.0) & (original description: Putative EDD1, Description = Glycine--tRNA ligase, chloroplastic/mitochondrial 2, PFAM = PF02092;PF02091)' T
'29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf03548_168273-176588' '(at1g29880 : 1051.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 873.0) no description available & (gnl|cdd|30772 : 624.0) no description available & (reliability: 2102.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF03129;PF00587)' T
'29.1.15' 'protein.aa activation.proline-tRNA ligase' 'nbv0.3scaffold57691_2416-12411' '(at1g44835 : 315.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33555 : 124.0) no description available & (reliability: 630.0) & (original description: Putative At1g44835, Description = YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein, PFAM = PF04073)' T
'29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf01180_719651-731080' '(at1g44835 : 311.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33555 : 129.0) no description available & (reliability: 622.0) & (original description: Putative At1g44835, Description = YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein, PFAM = PF04073)' T
'29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf03374_396135-410712' '(at4g16510 : 316.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative BnaAnng27600D, Description = BnaAnng27600D protein, PFAM = PF04073)' T
'29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf03374_406844-410889' '(at4g16510 : 239.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative ZOSMA_85G00650, Description = Proline--tRNA ligase, PFAM = PF04073)' T
'29.1.16' 'protein.aa activation.cysteine-tRNA ligase' 'niben101scf02706_155613-168002' '(at2g31170 : 828.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (gnl|cdd|80596 : 642.0) no description available & (gnl|cdd|37218 : 595.0) no description available & (reliability: 1656.0) & (original description: Putative SYCO, Description = Cysteine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF01406;PF09190)' T
'29.1.16' 'protein.aa activation.cysteine-tRNA ligase' 'niben101scf17831_131090-139377' '(at5g38830 : 642.0) Cysteinyl-tRNA synthetase, class Ia family protein; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, cysteinyl-tRNA aminoacylation; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT3G56300.1); Has 11267 Blast hits to 10945 proteins in 2873 species: Archae - 213; Bacteria - 6070; Metazoa - 419; Fungi - 280; Plants - 139; Viruses - 3; Other Eukaryotes - 4143 (source: NCBI BLink). & (gnl|cdd|80596 : 632.0) no description available & (gnl|cdd|37218 : 571.0) no description available & (reliability: 1284.0) & (original description: Putative cysS, Description = Cysteine--tRNA ligase, PFAM = PF01406)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'nbv0.5scaffold521_427654-449608' '(q43794|sye_tobac : 1108.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 870.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 611.0) no description available & (gnl|cdd|80878 : 558.0) no description available & (reliability: 1740.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'nbv0.5scaffold4360_142213-160828' '(q43794|sye_tobac : 1070.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 834.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 590.0) no description available & (gnl|cdd|80878 : 544.0) no description available & (reliability: 1668.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben044scf00001597ctg011_1038-4211' '(q43794|sye_tobac : 296.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 202.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 82.3) no description available & (reliability: 404.0) & (original description: Putative OVA3, Description = Glutamate--tRNA ligase, chloroplastic/mitochondrial, PFAM = )' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben044scf00005109ctg010_8775-17751' '(at5g26710 : 1109.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (gnl|cdd|36362 : 946.0) no description available & (gnl|cdd|81539 : 374.0) no description available & (p52780|syq_luplu : 239.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 2218.0) & (original description: Putative eprs, Description = Glutamate-tRNA ligase, PFAM = PF03950;PF00749)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf01670_411482-432330' '(q43794|sye_tobac : 1093.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 859.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 603.0) no description available & (gnl|cdd|80878 : 549.0) no description available & (reliability: 1718.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf03004_316070-336609' '(q43794|sye_tobac : 1105.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 866.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 610.0) no description available & (gnl|cdd|80878 : 557.0) no description available & (reliability: 1732.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T
'29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf05932_349446-360813' '(at5g26710 : 1121.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (gnl|cdd|36362 : 949.0) no description available & (gnl|cdd|81539 : 374.0) no description available & (p52780|syq_luplu : 239.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 2242.0) & (original description: Putative eprs, Description = Glutamate-tRNA ligase, PFAM = PF00749;PF03950)' T
'29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben044scf00002598ctg004_47689-51004' '(p52780|syq_luplu : 187.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 186.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|86684 : 157.0) no description available & (gnl|cdd|36363 : 152.0) no description available & (reliability: 372.0) & (original description: Putative BnaC03g64100D, Description = BnaC03g64100D protein, PFAM = PF04558)' T
'29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben044scf00002598ctg005_2793-10341' '(p52780|syq_luplu : 1070.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 1026.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|36363 : 871.0) no description available & (gnl|cdd|81539 : 683.0) no description available & (reliability: 2052.0) & (original description: Putative cinA, Description = Glutaminyl-tRNA synthetase, PFAM = PF03950;PF00749;PF04557)' T
'29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben101scf14118_26911-40714' '(p52780|syq_luplu : 1263.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 1229.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|36363 : 1020.0) no description available & (gnl|cdd|81539 : 687.0) no description available & (reliability: 2458.0) & (original description: Putative cinA, Description = Putative glutamine--tRNA ligase, PFAM = PF03950;PF04558;PF04557;PF00749)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'nbv0.3scaffold69297_34-9473' '(at4g26300 : 959.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 867.0) no description available & (gnl|cdd|80884 : 536.0) no description available & (reliability: 1918.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF03485;PF00750;PF05746)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'nbv0.5scaffold8024_706-15684' '(at4g26300 : 933.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 856.0) no description available & (gnl|cdd|80884 : 530.0) no description available & (reliability: 1866.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase, PFAM = PF00750;PF05746;PF03485)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben044scf00044457ctg000_1423-9624' '(at5g05700 : 549.0) Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.; arginine-tRNA protein transferase 1 (ATE1); CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 2 (TAIR:AT3G11240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36407 : 450.0) no description available & (gnl|cdd|67968 : 209.0) no description available & (reliability: 1098.0) & (original description: Putative ATE1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04377;PF04376)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben044scf00054590ctg000_2729-11135' '(at4g26300 : 877.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 794.0) no description available & (gnl|cdd|80884 : 478.0) no description available & (reliability: 1754.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF00750;PF03485;PF05746)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf01927_485738-496878' '(at4g26300 : 959.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 869.0) no description available & (gnl|cdd|80884 : 536.0) no description available & (reliability: 1918.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF03485;PF05746;PF00750)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf03307_4654-23427' '(at4g26300 : 928.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 854.0) no description available & (gnl|cdd|80884 : 528.0) no description available & (reliability: 1856.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF05746;PF00750;PF03485)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf03307_16931-21651' '(at4g26300 : 179.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 165.0) no description available & (gnl|cdd|80884 : 92.9) no description available & (reliability: 358.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase, PFAM = PF00750;PF00750)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf04044_323834-332993' '(at5g05700 : 551.0) Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.; arginine-tRNA protein transferase 1 (ATE1); CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 2 (TAIR:AT3G11240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36407 : 443.0) no description available & (gnl|cdd|67968 : 209.0) no description available & (reliability: 1102.0) & (original description: Putative ATE1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04377;PF04376)' T
'29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf06926_666642-674947' '(at3g11240 : 152.0) Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36407 : 139.0) no description available & (gnl|cdd|67967 : 111.0) no description available & (reliability: 304.0) & (original description: Putative ate1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04376)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'nbv0.5scaffold1620_122679-137258' '(at4g39280 : 805.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (gnl|cdd|37995 : 687.0) no description available & (gnl|cdd|81306 : 419.0) no description available & (reliability: 1610.0) & (original description: Putative frs2, Description = Phenylalanyl-tRNA synthetase alpha chain, PFAM = PF01409)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben044scf00019626ctg002_8246-17504' '(at1g72550 : 347.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 311.0) no description available & (gnl|cdd|83112 : 201.0) no description available & (reliability: 694.0) & (original description: Putative frs1, Description = Phenylalanyl-tRNA synthetase beta chain, PFAM = PF01409;PF03484)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben044scf00019626ctg006_358-8134' '(at1g72550 : 503.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 435.0) no description available & (gnl|cdd|83112 : 222.0) no description available & (reliability: 1006.0) & (original description: Putative SYFB, Description = Putative phenylalanine--tRNA ligase beta subunit, PFAM = PF03483)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf01075_359186-370682' '(at4g39280 : 803.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (gnl|cdd|37995 : 688.0) no description available & (gnl|cdd|81306 : 422.0) no description available & (reliability: 1606.0) & (original description: Putative frs2, Description = Phenylalanyl-tRNA synthetase alpha chain, PFAM = PF01409)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf03196_31528-55413' '(at1g72550 : 838.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 737.0) no description available & (gnl|cdd|83112 : 417.0) no description available & (reliability: 1676.0) & (original description: Putative pheS, Description = Phenylalanyl-tRNA synthetase beta chain, PFAM = PF03484;PF03483;PF01409)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf04375_586745-596426' '(at3g58140 : 666.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (gnl|cdd|37994 : 531.0) no description available & (gnl|cdd|29807 : 248.0) no description available & (reliability: 1332.0) & (original description: Putative fars2, Description = Phenylalanyl-tRNA synthetase, PFAM = PF01409;PF03147)' T
'29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf12360_1-13361' '(at3g58140 : 385.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (gnl|cdd|37994 : 289.0) no description available & (gnl|cdd|29807 : 169.0) no description available & (reliability: 770.0) & (original description: Putative fars2, Description = Phenylalanine--tRNA ligase, mitochondrial, PFAM = PF01409)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'nbv0.3scaffold60323_140-11830' '(at3g46100 : 318.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 222.0) no description available & (gnl|cdd|30473 : 182.0) no description available & (reliability: 636.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'nbv0.5scaffold2909_61648-88314' '(at3g46100 : 627.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 388.0) no description available & (gnl|cdd|30473 : 309.0) no description available & (p93422|syh_orysa : 121.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF03129;PF13393)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben044scf00015472ctg010_1-3442' '(at3g46100 : 197.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 122.0) no description available & (gnl|cdd|73226 : 98.7) no description available & (reliability: 394.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf07591_154718-188891' '(at3g46100 : 669.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 414.0) no description available & (gnl|cdd|30473 : 335.0) no description available & (p93422|syh_orysa : 123.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1338.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393;PF03129)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf09172_91459-106559' '(at3g02760 : 787.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (p93422|syh_orysa : 712.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (gnl|cdd|37147 : 569.0) no description available & (gnl|cdd|30473 : 350.0) no description available & (reliability: 1574.0) & (original description: Putative hars, Description = Histidine--tRNA ligase, cytoplasmic, PFAM = PF03129;PF00221;PF13393)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf11491_314329-345198' '(at3g46100 : 613.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 372.0) no description available & (gnl|cdd|80464 : 318.0) no description available & (p93422|syh_orysa : 96.7) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1226.0) & (original description: Putative ATHRS1, Description = Histidyl-tRNA synthetase 1, PFAM = PF13393;PF03129)' T
'29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf18348_97273-106395' '(at3g02760 : 800.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (p93422|syh_orysa : 714.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (gnl|cdd|37147 : 569.0) no description available & (gnl|cdd|30473 : 351.0) no description available & (reliability: 1600.0) & (original description: Putative hisS, Description = Histidine--tRNA ligase, cytoplasmic, PFAM = PF00221;PF03129;PF13393)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'nbv0.3scaffold10026_19389-29088' '(at4g17300 : 863.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (gnl|cdd|81233 : 730.0) no description available & (gnl|cdd|35774 : 618.0) no description available & (reliability: 1726.0) & (original description: Putative asnS, Description = Asparagine--tRNA ligase, PFAM = PF01336;PF00152)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben044scf00001260ctg000_1-5483' '(at5g56680 : 800.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 483.0) no description available & (gnl|cdd|35774 : 422.0) no description available & (reliability: 1600.0) & (original description: Putative SYNC1, Description = Asparagine--tRNA ligase, cytoplasmic 1, PFAM = PF00152;PF00152;PF01336)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf02275_408477-422060' '(at5g56680 : 796.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 476.0) no description available & (gnl|cdd|35774 : 417.0) no description available & (reliability: 1592.0) & (original description: Putative SYNC3, Description = Asparagine--tRNA ligase, cytoplasmic 3, PFAM = PF01336;PF00152;PF00152)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf02979_338042-344212' '(at5g56680 : 825.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 493.0) no description available & (gnl|cdd|35774 : 422.0) no description available & (reliability: 1650.0) & (original description: Putative SYNC1, Description = Asparagine--tRNA ligase, cytoplasmic 1, PFAM = PF00152;PF00152;PF01336)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf06825_52911-69262' '(at4g17300 : 873.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (gnl|cdd|81233 : 726.0) no description available & (gnl|cdd|35774 : 619.0) no description available & (reliability: 1746.0) & (original description: Putative SYNO, Description = Asparagine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00152;PF01336)' T
'29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf12789_125933-130712' '(at3g07420 : 620.0) Encodes an asparaginyl-tRNA synthetase.; asparaginyl-tRNA synthetase 2 (NS2); CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT5G56680.1); Has 9059 Blast hits to 7126 proteins in 1951 species: Archae - 376; Bacteria - 6198; Metazoa - 478; Fungi - 585; Plants - 210; Viruses - 0; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|81233 : 352.0) no description available & (gnl|cdd|35774 : 308.0) no description available & (reliability: 1240.0) & (original description: Putative SYNC2, Description = Asparagine--tRNA ligase, cytoplasmic 2, PFAM = PF00152;PF00152)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold7255_39028-46479' '(at1g76050 : 491.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 251.0) no description available & (gnl|cdd|37130 : 185.0) no description available & (reliability: 982.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold7695_34375-42513' '(at1g09800 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 10187 Blast hits to 8452 proteins in 2593 species: Archae - 98; Bacteria - 6891; Metazoa - 134; Fungi - 4; Plants - 112; Viruses - 0; Other Eukaryotes - 2948 (source: NCBI BLink). & (gnl|cdd|30020 : 209.0) no description available & (gnl|cdd|39594 : 186.0) no description available & (reliability: 836.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase, PFAM = PF01416;PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold8223_41689-53891' '(at5g35400 : 194.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G20370.1). & (reliability: 388.0) & (original description: Putative PGSC0003DMG402009562, Description = tRNA pseudouridine synthase, PFAM = )' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold12908_41484-43553' '(at3g52260 : 105.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (reliability: 210.0) & (original description: Putative At3g52260, Description = RNA pseudourine synthase 5, PFAM = )' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold31198_2733-10443' '(at2g39140 : 249.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 124.0) no description available & (reliability: 498.0) & (original description: Putative rluB, Description = Pseudouridine synthase, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold39836_2052-10102' '(at2g39140 : 464.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 220.0) no description available & (reliability: 928.0) & (original description: Putative yjbC, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold80010_774-4263' '(at1g20370 : 551.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 3883 Blast hits to 3550 proteins in 1359 species: Archae - 140; Bacteria - 2302; Metazoa - 346; Fungi - 312; Plants - 197; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink). & (gnl|cdd|37764 : 244.0) no description available & (gnl|cdd|73314 : 181.0) no description available & (reliability: 1102.0) & (original description: Putative Os02g0668400, Description = Os02g0668400 protein, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold1177_242661-260392' '(at3g52260 : 464.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 181.0) no description available & (gnl|cdd|37130 : 101.0) no description available & (reliability: 928.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold2655_132312-140141' '(at3g19440 : 439.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|30910 : 161.0) no description available & (gnl|cdd|37130 : 155.0) no description available & (reliability: 878.0) & (original description: Putative At3g19440, Description = RNA pseudouridine synthase 4, mitochondrial, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold4314_33829-44773' '(at3g52260 : 435.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 163.0) no description available & (gnl|cdd|37130 : 85.4) no description available & (reliability: 870.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00012829ctg004_19824-35097' '(at1g34150 : 459.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 362.0) no description available & (gnl|cdd|37765 : 294.0) no description available & (reliability: 918.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00025466ctg000_15356-34897' '(at3g52260 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 174.0) no description available & (gnl|cdd|37130 : 84.7) no description available & (reliability: 836.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00033146ctg002_6417-12918' '(at3g19440 : 308.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|30910 : 113.0) no description available & (gnl|cdd|37130 : 96.6) no description available & (reliability: 616.0) & (original description: Putative PGSC0003DMG400025766, Description = RNA pseudouridylate synthase 4, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00033146ctg003_1-1907' '(at3g19440 : 143.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative rluA, Description = Pseudouridine synthase, PFAM = )' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00050083ctg001_5253-13315' '(at5g14460 : 590.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 284.0) no description available & (gnl|cdd|37740 : 152.0) no description available & (reliability: 1180.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF01509;PF16198)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00051597ctg002_163-6964' '(at1g76050 : 372.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 197.0) no description available & (gnl|cdd|37130 : 138.0) no description available & (reliability: 744.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF01479;PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00056299ctg005_260-2943' '(at1g56345 : 287.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 123.0) no description available & (gnl|cdd|37130 : 109.0) no description available & (reliability: 574.0) & (original description: Putative glysoja_012041, Description = RNA pseudourine synthase 1, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00046_442824-451482' '(at5g14460 : 582.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 285.0) no description available & (gnl|cdd|37740 : 157.0) no description available & (reliability: 1164.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF16198;PF01509)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00332_631698-636973' '(at1g56345 : 353.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 152.0) no description available & (gnl|cdd|37130 : 122.0) no description available & (reliability: 706.0) & (original description: Putative BnaCnng48160D, Description = BnaCnng48160D protein, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00332_632088-636974' '(at1g56345 : 181.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 81.2) no description available & (reliability: 362.0) & (original description: Putative At1g56345, Description = RNA pseudouridine synthase 1, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00539_580146-588097' '(at1g76050 : 484.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 244.0) no description available & (gnl|cdd|37130 : 177.0) no description available & (reliability: 968.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01671_605771-611953' '(at3g06950 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G34150.1); Has 9137 Blast hits to 9127 proteins in 2768 species: Archae - 169; Bacteria - 5633; Metazoa - 320; Fungi - 238; Plants - 169; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|30020 : 278.0) no description available & (gnl|cdd|39594 : 247.0) no description available & (reliability: 836.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase A, PFAM = PF01416;PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01673_194948-228522' '(at5g35400 : 397.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G20370.1). & (gnl|cdd|30020 : 146.0) no description available & (gnl|cdd|37764 : 81.1) no description available & (reliability: 794.0) & (original description: Putative At5g35400, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01711_222608-230880' '(at1g09800 : 461.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 10187 Blast hits to 8452 proteins in 2593 species: Archae - 98; Bacteria - 6891; Metazoa - 134; Fungi - 4; Plants - 112; Viruses - 0; Other Eukaryotes - 2948 (source: NCBI BLink). & (gnl|cdd|30020 : 209.0) no description available & (gnl|cdd|39594 : 188.0) no description available & (reliability: 922.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase, PFAM = PF01416;PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01942_193981-204369' '(at1g34150 : 451.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 358.0) no description available & (gnl|cdd|37765 : 289.0) no description available & (reliability: 902.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf02719_119663-145668' '(at2g30320 : 469.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 2235 Blast hits to 2027 proteins in 681 species: Archae - 89; Bacteria - 873; Metazoa - 390; Fungi - 255; Plants - 163; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|37764 : 265.0) no description available & (gnl|cdd|73314 : 179.0) no description available & (reliability: 938.0) & (original description: Putative At2g30320, Description = Putative tRNA pseudouridine synthase, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf03503_11058-25093' '(at1g76050 : 485.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 251.0) no description available & (gnl|cdd|37130 : 187.0) no description available & (reliability: 970.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF01479;PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf05057_750334-766384' '(at1g34150 : 424.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 362.0) no description available & (gnl|cdd|37765 : 295.0) no description available & (reliability: 848.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf06837_209299-220126' '(at3g19440 : 145.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative rluC, Description = Ribosomal pseudouridine synthase, putative, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf07790_201473-209006' '(at4g21770 : 615.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); Has 5935 Blast hits to 5933 proteins in 1806 species: Archae - 0; Bacteria - 4596; Metazoa - 112; Fungi - 68; Plants - 78; Viruses - 0; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|37130 : 191.0) no description available & (gnl|cdd|30029 : 97.0) no description available & (reliability: 1230.0) & (original description: Putative At4g21770, Description = RNA pseudouridine synthase 6, chloroplastic, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf07939_155597-161349' '(at1g78910 : 622.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 16543 Blast hits to 16535 proteins in 2635 species: Archae - 10; Bacteria - 12720; Metazoa - 248; Fungi - 118; Plants - 203; Viruses - 0; Other Eukaryotes - 3244 (source: NCBI BLink). & (gnl|cdd|37130 : 184.0) no description available & (gnl|cdd|30910 : 137.0) no description available & (reliability: 1244.0) & (original description: Putative At1g78910, Description = RNA pseudouridine synthase 3, mitochondrial, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf08533_304540-345554' '(at3g52260 : 479.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 188.0) no description available & (gnl|cdd|37130 : 102.0) no description available & (reliability: 958.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf08936_398048-409906' '(at5g51140 : 481.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G52260.2). & (gnl|cdd|37130 : 320.0) no description available & (gnl|cdd|73313 : 247.0) no description available & (reliability: 962.0) & (original description: Putative Os02g0512300, Description = RNA pseudouridine synthase 7, PFAM = PF00849)' T
'29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf15442_13440-21941' '(at2g39140 : 433.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 187.0) no description available & (reliability: 866.0) & (original description: Putative yjbC, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold20836_25057-32730' '(at3g62120 : 872.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 809.0) no description available & (gnl|cdd|82724 : 592.0) no description available & (reliability: 1744.0) & (original description: Putative proS, Description = Prolyl-tRNA synthetase, PFAM = PF00587;PF03129;PF09180)' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold30147_1542-10332' '(at3g62120 : 879.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 808.0) no description available & (gnl|cdd|82724 : 599.0) no description available & (reliability: 1758.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = PF00587;PF03129;PF09180)' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold60292_1-4362' '(at3g62120 : 171.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 163.0) no description available & (gnl|cdd|29823 : 115.0) no description available & (reliability: 342.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = )' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.5scaffold3997_17733-21655' '(gnl|cdd|39365 : 163.0) no description available & (at3g62120 : 159.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|29823 : 116.0) no description available & (reliability: 318.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = )' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.5scaffold6760_13977-19134' '(at3g62120 : 337.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 328.0) no description available & (gnl|cdd|29823 : 263.0) no description available & (reliability: 674.0) & (original description: Putative Eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = PF00587)' T
'29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'niben101scf17442_6135-13475' '(at5g52520 : 838.0) OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82724 : 697.0) no description available & (gnl|cdd|39365 : 670.0) no description available & (reliability: 1676.0) & (original description: Putative OVA6, Description = Proline--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF03129;PF00587;PF09180)' T
'29.2' 'protein.synthesis' 'nbv0.3scaffold61576_3558-7578' '(at1g64790 : 115.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 230.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T
'29.2' 'protein.synthesis' 'nbv0.5scaffold1607_146728-154112' '(at1g64790 : 113.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 226.0) & (original description: Putative ILA, Description = Translational activator GCN1, PFAM = )' T
'29.2' 'protein.synthesis' 'niben044scf00008510ctg030_1-3539' '(at1g64790 : 146.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 292.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T
'29.2' 'protein.synthesis' 'niben044scf00014161ctg000_1-7686' '(at1g64790 : 679.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 1358.0) & (original description: Putative ILA, Description = Translational activator GCN1, PFAM = )' T
'29.2' 'protein.synthesis' 'niben101scf00420_109795-113820' '(at1g64790 : 199.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 398.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T
'29.2' 'protein.synthesis' 'niben101scf04707_26323-80843' '(at1g64790 : 3431.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|36456 : 619.0) no description available & (reliability: 6862.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = PF12348)' T
'29.2' 'protein.synthesis' 'niben101scf04707_37573-40296' '(at1g64790 : 193.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 386.0) & (original description: Putative gcn1, Description = Translational activator GCN1, PFAM = )' T
'29.2.1' 'protein.synthesis.ribosomal protein' '' ''
'29.2.1.1' 'protein.synthesis.ribosomal protein.prokaryotic' '' ''
'29.2.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast' '' ''
'29.2.1.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit' '' ''
'29.2.1.1.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S1' '' ''
'29.2.1.1.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S2' 'niben101scf14012_73973-76680' '(p06355|rr2_tobac : 491.0) Chloroplast 30S ribosomal protein S2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79284 : 457.0) no description available & (atcg00160 : 439.0) Chloroplast ribosomal protein S2; ribosomal protein S2 (RPS2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, bacteria/mitochondria/plastid (InterPro:IPR005706). & (gnl|cdd|36050 : 246.0) no description available & (reliability: 878.0) & (original description: Putative rps2, Description = 30S ribosomal protein S2, chloroplastic, PFAM = PF00318)' T
'29.2.1.1.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3' 'nbv0.5scaffold6582_94657-97310' '(p06357|rr3_tobac : 419.0) Chloroplast 30S ribosomal protein S3 - Nicotiana tabacum (Common tobacco) & (atcg00800 : 381.0) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex; RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, nucleoid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Ribosomal protein S3, N-terminal (InterPro:IPR008282), K homology-like, alpha/beta (InterPro:IPR015946), Ribosomal protein S3, conserved site (InterPro:IPR018280), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, bacterial (InterPro:IPR005704); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome;protein binding (TAIR:ATMG00090.1). & (gnl|cdd|79266 : 376.0) no description available & (reliability: 762.0) & (original description: Putative rps3, Description = 30S ribosomal protein S3, chloroplastic, PFAM = PF00189)' T
'29.2.1.1.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3' 'niben044scf00004497ctg002_1-1312' '(p06357|rr3_tobac : 184.0) Chloroplast 30S ribosomal protein S3 - Nicotiana tabacum (Common tobacco) & (atcg00800 : 167.0) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex; RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, nucleoid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Ribosomal protein S3, N-terminal (InterPro:IPR008282), K homology-like, alpha/beta (InterPro:IPR015946), Ribosomal protein S3, conserved site (InterPro:IPR018280), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, bacterial (InterPro:IPR005704); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome;protein binding (TAIR:ATMG00090.1). & (gnl|cdd|79266 : 163.0) no description available & (reliability: 334.0) & (original description: Putative rps3, Description = Rps3, PFAM = )' T
'29.2.1.1.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4' 'nbv0.5scaffold3989_2527-5129' '(gnl|cdd|79226 : 373.0) no description available & (p06359|rr4_tobac : 367.0) Chloroplast 30S ribosomal protein S4 - Nicotiana tabacum (Common tobacco) & (atcg00380 : 323.0) Chloroplast encoded ribosomal protein S4; chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709). & (gnl|cdd|38511 : 150.0) no description available & (reliability: 646.0) & (original description: Putative rps4, Description = 30S ribosomal protein S4, chloroplastic, PFAM = PF00163;PF01479)' T
'29.2.1.1.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4' 'niben101scf00558_71523-73834' '(gnl|cdd|79226 : 355.0) no description available & (p06359|rr4_tobac : 349.0) Chloroplast 30S ribosomal protein S4 - Nicotiana tabacum (Common tobacco) & (atcg00380 : 308.0) Chloroplast encoded ribosomal protein S4; chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709). & (gnl|cdd|38511 : 145.0) no description available & (reliability: 616.0) & (original description: Putative rps4, Description = 30S ribosomal protein S4, chloroplastic, PFAM = PF00163;PF01479)' T
'29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'nbv0.5scaffold1304_140463-143720' '(q9st69|rr5_spiol : 164.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 150.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|79350 : 113.0) no description available & (gnl|cdd|36095 : 92.7) no description available & (reliability: 300.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, PFAM = PF00333)' T
'29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben044scf00010967ctg012_12624-15852' '(q9st69|rr5_spiol : 162.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 152.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|79350 : 115.0) no description available & (gnl|cdd|36095 : 97.7) no description available & (reliability: 304.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, PFAM = PF00333)' T
'29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben101scf01436_339629-344601' '(q9st69|rr5_spiol : 304.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 293.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|80701 : 209.0) no description available & (gnl|cdd|36095 : 156.0) no description available & (reliability: 586.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, chloroplastic, PFAM = PF00333;PF03719)' T
'29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben101scf06570_293900-299479' '(q9st69|rr5_spiol : 301.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 294.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|80701 : 210.0) no description available & (gnl|cdd|36095 : 160.0) no description available & (reliability: 588.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, chloroplastic, PFAM = PF03719;PF00333)' T
'29.2.1.1.1.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S6' 'niben101scf00132_310500-320901' '(at1g64510 : 219.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 1523 Blast hits to 1523 proteins in 532 species: Archae - 0; Bacteria - 1112; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (p82403|rr6_spiol : 219.0) 30S ribosomal protein S6 alpha, chloroplast precursor [Contains: 30S ribosomal protein S6 beta; 30S ribosomal protein S6 gamma; 30S ribosomal protein S6 delta; 30S ribosomal protein S6 epsilon] (Fragment) - Spinacia oleracea (Spinach) & (reliability: 438.0) & (original description: Putative RPS6, Description = 30S ribosomal protein S6 alpha, chloroplastic, PFAM = PF01250)' T
'29.2.1.1.1.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S6' 'niben101scf02011_965443-969723' '(at1g64510 : 232.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 1523 Blast hits to 1523 proteins in 532 species: Archae - 0; Bacteria - 1112; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (p82403|rr6_spiol : 219.0) 30S ribosomal protein S6 alpha, chloroplast precursor [Contains: 30S ribosomal protein S6 beta; 30S ribosomal protein S6 gamma; 30S ribosomal protein S6 delta; 30S ribosomal protein S6 epsilon] (Fragment) - Spinacia oleracea (Spinach) & (reliability: 464.0) & (original description: Putative RPS6, Description = 30S ribosomal protein S6 alpha, chloroplastic, PFAM = PF01250)' T
'29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold72908_777-3169' '(p62732|rr7_tobac : 220.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 217.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 206.0) no description available & (gnl|cdd|38501 : 130.0) no description available & (reliability: 434.0) & (original description: Putative rpl2, Description = 30S ribosomal protein S7, chloroplastic, PFAM = PF00177)' T
'29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold91083_3834-5266' '(p62732|rr7_tobac : 208.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 206.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 197.0) no description available & (gnl|cdd|38501 : 129.0) no description available & (reliability: 412.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T
'29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold117614_1-2031' '(p62732|rr7_tobac : 176.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 174.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 171.0) no description available & (gnl|cdd|38501 : 107.0) no description available & (reliability: 348.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T
'29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'niben044scf00046488ctg006_3994-6310' '(p62732|rr7_tobac : 167.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 164.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 158.0) no description available & (gnl|cdd|38501 : 103.0) no description available & (reliability: 328.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T
'29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'niben101scf03484_344859-395652' '(p62732|rr7_tobac : 171.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 169.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 168.0) no description available & (gnl|cdd|38501 : 105.0) no description available & (reliability: 338.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T
'29.2.1.1.1.1.8' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S8' 'nbv0.5scaffold4427_259709-261196' '(gnl|cdd|79260 : 213.0) no description available & (q8s8v8|rr8_atrbe : 206.0) Chloroplast 30S ribosomal protein S8 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00770 : 184.0) chloroplast 30S ribosomal protein S8; ribosomal protein S8 (RPS8); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630). & (gnl|cdd|36965 : 110.0) no description available & (reliability: 368.0) & (original description: Putative rps8, Description = 30S ribosomal protein S8, chloroplastic, PFAM = PF00410)' T
'29.2.1.1.1.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9' 'nbv0.3scaffold16653_4716-8619' '(p82278|rr9_spiol : 226.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (at1g74970 : 221.0) ribosomal protein S9, nuclear encoded component of the chloroplast ribosome; ribosomal protein S9 (RPS9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S9, conserved site (InterPro:IPR020574); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G49080.1); Has 7998 Blast hits to 7997 proteins in 2816 species: Archae - 205; Bacteria - 5347; Metazoa - 103; Fungi - 127; Plants - 149; Viruses - 0; Other Eukaryotes - 2067 (source: NCBI BLink). & (gnl|cdd|36910 : 178.0) no description available & (gnl|cdd|80536 : 176.0) no description available & (reliability: 442.0) & (original description: Putative rps9, Description = 30S ribosomal protein S9, chloroplastic, PFAM = PF00380)' T
'29.2.1.1.1.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9' 'niben101scf04107_73238-77612' '(p82278|rr9_spiol : 229.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (at1g74970 : 223.0) ribosomal protein S9, nuclear encoded component of the chloroplast ribosome; ribosomal protein S9 (RPS9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S9, conserved site (InterPro:IPR020574); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G49080.1); Has 7998 Blast hits to 7997 proteins in 2816 species: Archae - 205; Bacteria - 5347; Metazoa - 103; Fungi - 127; Plants - 149; Viruses - 0; Other Eukaryotes - 2067 (source: NCBI BLink). & (gnl|cdd|36910 : 177.0) no description available & (gnl|cdd|80536 : 177.0) no description available & (reliability: 446.0) & (original description: Putative PRPS9, Description = 30S ribosomal protein S9, chloroplastic, PFAM = PF00380)' T
'29.2.1.1.1.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S10' 'niben101scf05581_69090-76154' '(q9m4y3|rr10_mescr : 213.0) 30S ribosomal protein S10, chloroplast precursor - Mesembryanthemum crystallinum (Common ice plant) & (at3g13120 : 203.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848). & (gnl|cdd|80713 : 149.0) no description available & (gnl|cdd|36118 : 92.7) no description available & (reliability: 406.0) & (original description: Putative RPS10, Description = 30S ribosomal protein S10, chloroplastic, PFAM = PF00338)' T
'29.2.1.1.1.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S11' 'nbv0.5scaffold999_516747-518194' '(gnl|cdd|79259 : 205.0) no description available & (q2vee7|rr11_soltu : 186.0) Chloroplast 30S ribosomal protein S11 - Solanum tuberosum (Potato) & (atcg00750 : 174.0) 30S chloroplast ribosomal protein S11; ribosomal protein S11 (RPS11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11, bacterial-type (InterPro:IPR019981), Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G52580.1). & (gnl|cdd|35629 : 152.0) no description available & (reliability: 348.0) & (original description: Putative rps11, Description = 30S ribosomal protein S11, chloroplastic, PFAM = PF00411)' T
'29.2.1.1.1.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S12' '' ''
'29.2.1.1.1.1.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13' 'niben101scf10002_108969-113272' '(at5g14320 : 222.0) Ribosomal protein S13/S18 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G77750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81460 : 159.0) no description available & (q8lpw2|rt13_soybn : 112.0) Small ribosomal subunit protein S13, mitochondrial precursor - Glycine max (Soybean) & (gnl|cdd|38521 : 105.0) no description available & (reliability: 444.0) & (original description: Putative RPS13, Description = 30S ribosomal protein S13, chloroplastic, PFAM = PF00416)' T
'29.2.1.1.1.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S14' 'niben101scf00568_514310-515672' '(gnl|cdd|79291 : 168.0) no description available & (p06371|rr14_tobac : 140.0) Chloroplast 30S ribosomal protein S14 - Nicotiana tabacum (Common tobacco) & (atcg00330 : 129.0) 30S chloroplast ribosomal protein S14; chloroplast ribosomal protein S14 (RPS14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271). & (gnl|cdd|36952 : 100.0) no description available & (reliability: 258.0) & (original description: Putative rps14, Description = 30S ribosomal protein S14, chloroplastic, PFAM = PF00253)' T
'29.2.1.1.1.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S15' 'niben101scf02762_219854-221763' '(p06373|rr15_tobac : 121.0) Chloroplast 30S ribosomal protein S15 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79245 : 114.0) no description available & (atcg01120 : 102.0) encodes a chloroplast ribosomal protein S15, a constituent of the small subunit of the ribosomal complex; chloroplast ribosomal protein S15 (RPS15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068). & (reliability: 204.0) & (original description: Putative rps15, Description = 30S ribosomal protein S15, chloroplastic, PFAM = PF00312)' T
'29.2.1.1.1.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S16' 'niben101scf03713_70734-73851' '(gnl|cdd|79224 : 152.0) no description available & (p06374|rr16_tobac : 150.0) Chloroplast 30S ribosomal protein S16 - Nicotiana tabacum (Common tobacco) & (atcg00050 : 114.0) Homologous to the bacterial ribosomal protein S16; ribosomal protein S16 (RPS16); CONTAINS InterPro DOMAIN/s: Ribosomal protein S16, conserved site (InterPro:IPR020592), Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1). & (gnl|cdd|38629 : 90.8) no description available & (reliability: 228.0) & (original description: Putative rps16, Description = 30S ribosomal protein S16, chloroplastic, PFAM = PF00886)' T
'29.2.1.1.1.1.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S17' 'niben101scf21202_30414-32887' '(at1g79850 : 99.8) nuclear-encoded 30S chloroplast ribosomal protein S17; ribosomal protein S17 (RPS17); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plastid small ribosomal subunit, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G49400.1); Has 7449 Blast hits to 7449 proteins in 2625 species: Archae - 136; Bacteria - 5329; Metazoa - 5; Fungi - 63; Plants - 102; Viruses - 0; Other Eukaryotes - 1814 (source: NCBI BLink). & (p17092|rr17_pea : 94.0) 30S ribosomal protein S17, chloroplast precursor (CS17) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|64243 : 93.0) no description available & (gnl|cdd|36951 : 81.7) no description available & (reliability: 199.6) & (original description: Putative RPS17, Description = 30S ribosomal protein S17, chloroplastic, PFAM = PF00366)' T
'29.2.1.1.1.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S18' 'nbv0.3scaffold43914_10318-12617' '(gnl|cdd|79294 : 138.0) no description available & (p69660|rr18_tobac : 114.0) Chloroplast 30S ribosomal protein S18 - Nicotiana tabacum (Common tobacco) & (atcg00650 : 97.4) chloroplast-encoded ribosomal protein S18; ribosomal protein S18 (RPS18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18, conserved site (InterPro:IPR018275), Ribosomal protein S18 (InterPro:IPR001648). & (reliability: 194.8) & (original description: Putative rps18, Description = 30S ribosomal protein S18, chloroplastic, PFAM = PF01084)' T
'29.2.1.1.1.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S18' 'niben101scf08684_449046-450488' '(gnl|cdd|79294 : 138.0) no description available & (p69660|rr18_tobac : 116.0) Chloroplast 30S ribosomal protein S18 - Nicotiana tabacum (Common tobacco) & (atcg00650 : 99.4) chloroplast-encoded ribosomal protein S18; ribosomal protein S18 (RPS18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18, conserved site (InterPro:IPR018275), Ribosomal protein S18 (InterPro:IPR001648). & (reliability: 198.8) & (original description: Putative rps18, Description = 30S ribosomal protein S18, chloroplastic, PFAM = PF01084)' T
'29.2.1.1.1.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S19' '' ''
'29.2.1.1.1.1.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S20' 'niben044scf00037198ctg007_1-5151' '(at3g15190 : 131.0) chloroplast 30S ribosomal protein S20, putative; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S20 (InterPro:IPR002583); Has 3989 Blast hits to 3989 proteins in 1480 species: Archae - 0; Bacteria - 3264; Metazoa - 2; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 674 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RPS20, Description = 30S ribosomal protein S20, chloroplastic, PFAM = PF01649)' T
'29.2.1.1.1.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S21' '' ''
'29.2.1.1.1.1.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S31' '' ''
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'nbv0.3scaffold90569_710-3971' '(p82412|rrp3_spiol : 160.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 155.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 310.0) & (original description: Putative ycf65, Description = Ycf65-like protein, PFAM = PF04839)' T
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'nbv0.5scaffold506_441407-461944' '(p82412|rrp3_spiol : 146.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 142.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 93.5) no description available & (reliability: 284.0) & (original description: Putative ycf65, Description = PSRP-3, PFAM = PF04839)' T
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf02522_201235-211700' '(p82412|rrp3_spiol : 162.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 155.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 103.0) no description available & (reliability: 310.0) & (original description: Putative ycf65, Description = Ycf65-like protein, PFAM = PF04839)' T
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf03015_373749-377923' '(p82412|rrp3_spiol : 176.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 158.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 316.0) & (original description: Putative PSRP3, Description = 30S ribosomal protein 3, chloroplastic, PFAM = PF04839)' T
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf04196_474630-483691' '(p82412|rrp3_spiol : 174.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at5g15760 : 156.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, plastid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT1G68590.1); Has 388 Blast hits to 388 proteins in 107 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 312.0) & (original description: Putative mut3G, Description = Ycf65-like protein, PFAM = PF04839)' T
'29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf09372_98716-119973' '(p82412|rrp3_spiol : 141.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 138.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 90.4) no description available & (reliability: 276.0) & (original description: Putative ycf65, Description = PSRP-3, PFAM = PF04839)' T
'29.2.1.1.1.1.530' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A' 'niben101scf04099_913363-921973' '(at5g24490 : 315.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 310.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (gnl|cdd|66197 : 89.1) no description available & (reliability: 630.0) & (original description: Putative PSRP1, Description = Ribosome-binding factor PSRP1, chloroplastic, PFAM = PF16321;PF02482)' T
'29.2.1.1.1.1.530' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A' 'niben101scf15666_88725-99124' '(at5g24490 : 297.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 288.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (gnl|cdd|66197 : 91.4) no description available & (reliability: 594.0) & (original description: Putative yhbH, Description = Putative sigma-54 modulation protein, PFAM = PF02482;PF16321)' T
'29.2.1.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit' '' ''
'29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'niben044scf00005939ctg008_952-8550' '(at3g63490 : 401.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9le95|rk1_spiol : 391.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|79341 : 334.0) no description available & (gnl|cdd|36782 : 229.0) no description available & (reliability: 802.0) & (original description: Putative RPL1, Description = 50S ribosomal protein L1, chloroplastic, PFAM = PF00687)' T
'29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'niben101scf03253_203232-210873' '(at3g63490 : 402.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9le95|rk1_spiol : 390.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|79341 : 334.0) no description available & (gnl|cdd|36782 : 231.0) no description available & (reliability: 804.0) & (original description: Putative RPL1, Description = 50S ribosomal protein L1, chloroplastic, PFAM = PF00687)' T
'29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben044scf00032038ctg001_1-1443' '(p06379|rk2_tobac : 238.0) Chloroplast 50S ribosomal protein L2 - Nicotiana tabacum (Common tobacco) & (atcg01310 : 233.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|79270 : 194.0) no description available & (gnl|cdd|35659 : 131.0) no description available & (reliability: 466.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T
'29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben101scf05776_138245-141159' '(gnl|cdd|79270 : 163.0) no description available & (q4vzk5|rk2_cucsa : 146.0) Chloroplast 50S ribosomal protein L2 - Cucumis sativus (Cucumber) & (atcg01310 : 139.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|36117 : 94.4) no description available & (reliability: 278.0) & (original description: Putative rps19, Description = 30S ribosomal protein S19, chloroplastic, PFAM = PF03947;PF00203)' T
'29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben101scf06840_14141-16835' '(p06379|rk2_tobac : 489.0) Chloroplast 50S ribosomal protein L2 - Nicotiana tabacum (Common tobacco) & (atcg01310 : 474.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|79270 : 437.0) no description available & (gnl|cdd|35659 : 271.0) no description available & (reliability: 948.0) & (original description: Putative rpl2, Description = 50S ribosomal protein L2, chloroplastic, PFAM = PF03947;PF00181)' T
'29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben044scf00026113ctg009_4820-9554' '(at3g17465 : 450.0) encodes a putative L3 ribosomal protein targeted to the plastid.; ribosomal protein L3 plastid (RPL3P); CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L3 family protein (TAIR:AT2G43030.1); Has 8719 Blast hits to 8719 proteins in 2855 species: Archae - 267; Bacteria - 5444; Metazoa - 136; Fungi - 140; Plants - 91; Viruses - 0; Other Eukaryotes - 2641 (source: NCBI BLink). & (gnl|cdd|38351 : 358.0) no description available & (gnl|cdd|80437 : 271.0) no description available & (o80360|rk3_tobac : 137.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative RPL3B, Description = 50S ribosomal protein L3-2, chloroplastic, PFAM = PF00297)' T
'29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben101scf04509_316328-320576' '(o80360|rk3_tobac : 405.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 318.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|38351 : 272.0) no description available & (gnl|cdd|80437 : 254.0) no description available & (reliability: 636.0) & (original description: Putative RPL3, Description = 50S ribosomal protein L3, chloroplastic, PFAM = PF00297)' T
'29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben101scf05816_6675-11130' '(o80360|rk3_tobac : 404.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 316.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|38351 : 271.0) no description available & (gnl|cdd|80437 : 255.0) no description available & (reliability: 632.0) & (original description: Putative RPL3, Description = 50S ribosomal protein L3, chloroplastic, PFAM = PF00297)' T
'29.2.1.1.1.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4' 'nbv0.5scaffold2437_50613-53541' '(o80361|rk4_tobac : 389.0) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (at1g07320 : 267.0) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81519 : 217.0) no description available & (gnl|cdd|36837 : 210.0) no description available & (reliability: 534.0) & (original description: Putative RPL4, Description = 50S ribosomal protein L4, chloroplastic, PFAM = PF00573)' T
'29.2.1.1.1.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4' 'niben101scf00978_1529787-1537730' '(o80361|rk4_tobac : 401.0) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (at1g07320 : 264.0) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81519 : 216.0) no description available & (gnl|cdd|36837 : 210.0) no description available & (reliability: 528.0) & (original description: Putative RPL4, Description = 50S ribosomal protein L4, chloroplastic, PFAM = PF00573)' T
'29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'nbv0.3scaffold59408_1-2016' '(at4g01310 : 187.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 170.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 155.0) no description available & (gnl|cdd|35619 : 147.0) no description available & (reliability: 374.0) & (original description: Putative rplE, Description = 50S ribosomal protein L5, PFAM = PF00281)' T
'29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'nbv0.5scaffold8077_16385-22327' '(at4g01310 : 345.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 342.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 290.0) no description available & (gnl|cdd|35619 : 251.0) no description available & (reliability: 690.0) & (original description: Putative rplE, Description = 50S ribosomal protein L5, PFAM = PF00281;PF00673)' T
'29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'niben101scf01448_200535-203202' '(at4g01310 : 188.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 170.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 155.0) no description available & (gnl|cdd|35619 : 146.0) no description available & (reliability: 376.0) & (original description: Putative RPL5, Description = 50S ribosomal protein L5, chloroplastic, PFAM = PF00281)' T
'29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'niben101scf02585_85284-92171' '(p82192|rk5_spiol : 344.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (at4g01310 : 343.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (gnl|cdd|80445 : 291.0) no description available & (gnl|cdd|35619 : 252.0) no description available & (reliability: 686.0) & (original description: Putative RPL5, Description = 50S ribosomal protein L5, chloroplastic, PFAM = PF00673;PF00281)' T
'29.2.1.1.1.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6' 'nbv0.3scaffold65254_4464-10488' '(at1g05190 : 318.0) embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink). & (gnl|cdd|81626 : 241.0) no description available & (gnl|cdd|38464 : 228.0) no description available & (p46748|rm06_prowi : 95.1) Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii & (reliability: 636.0) & (original description: Putative RPL6, Description = 50S ribosomal protein L6, chloroplastic, PFAM = PF00347;PF00347)' T
'29.2.1.1.1.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6' 'niben101scf00419_120140-125555' '(at1g05190 : 327.0) embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink). & (gnl|cdd|81626 : 241.0) no description available & (gnl|cdd|38464 : 227.0) no description available & (p46748|rm06_prowi : 93.2) Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii & (reliability: 654.0) & (original description: Putative RPL6, Description = 50S ribosomal protein L6, chloroplastic, PFAM = PF00347;PF00347)' T
'29.2.1.1.1.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9' 'niben101scf00436_670045-675233' '(at3g44890 : 215.0) Plastid ribosomal protein CL9; ribosomal protein L9 (RPL9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9, bacteria/chloroplast (InterPro:IPR020594), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 7269 Blast hits to 7269 proteins in 2533 species: Archae - 0; Bacteria - 5393; Metazoa - 2; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 1796 (source: NCBI BLink). & (q8l803|rk9_wheat : 202.0) 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) & (gnl|cdd|39807 : 145.0) no description available & (gnl|cdd|80541 : 113.0) no description available & (reliability: 430.0) & (original description: Putative RPL9, Description = 50S ribosomal protein L9, chloroplastic, PFAM = PF01281;PF03948)' T
'29.2.1.1.1.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9' 'niben101scf06799_75736-81083' '(at3g44890 : 207.0) Plastid ribosomal protein CL9; ribosomal protein L9 (RPL9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9, bacteria/chloroplast (InterPro:IPR020594), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 7269 Blast hits to 7269 proteins in 2533 species: Archae - 0; Bacteria - 5393; Metazoa - 2; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 1796 (source: NCBI BLink). & (q8l803|rk9_wheat : 199.0) 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) & (gnl|cdd|39807 : 144.0) no description available & (gnl|cdd|80541 : 113.0) no description available & (reliability: 414.0) & (original description: Putative RPL9, Description = 50S ribosomal protein L9, chloroplastic, PFAM = PF03948;PF01281)' T
'29.2.1.1.1.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10' 'niben101scf01818_205372-208052' '(o80362|rk10_tobac : 417.0) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (at5g13510 : 275.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80511 : 132.0) no description available & (reliability: 550.0) & (original description: Putative RPL10, Description = 50S ribosomal protein L10, chloroplastic, PFAM = PF00466)' T
'29.2.1.1.1.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10' 'niben101scf06291_350694-353509' '(o80362|rk10_tobac : 416.0) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (at5g13510 : 275.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80511 : 134.0) no description available & (reliability: 550.0) & (original description: Putative RPL10, Description = 50S ribosomal protein L10, chloroplastic, PFAM = PF00466)' T
'29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'nbv0.3scaffold29001_22810-25295' '(at4g35490 : 209.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 197.0) no description available & (gnl|cdd|47926 : 160.0) no description available & (reliability: 418.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T
'29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben044scf00016479ctg005_345-2942' '(at4g35490 : 209.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 197.0) no description available & (gnl|cdd|47926 : 160.0) no description available & (reliability: 418.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T
'29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben101scf00381_841020-843505' '(at4g35490 : 211.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 200.0) no description available & (gnl|cdd|47926 : 163.0) no description available & (reliability: 422.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T
'29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben101scf07036_280526-285546' '(at1g32990 : 263.0) mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11; plastid ribosomal protein l11 (PRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT5G51610.1); Has 8526 Blast hits to 8526 proteins in 2812 species: Archae - 305; Bacteria - 5419; Metazoa - 123; Fungi - 122; Plants - 106; Viruses - 0; Other Eukaryotes - 2451 (source: NCBI BLink). & (p31164|rk11_spiol : 250.0) 50S ribosomal protein L11, chloroplast precursor (CL11) - Spinacia oleracea (Spinach) & (gnl|cdd|80543 : 223.0) no description available & (gnl|cdd|38467 : 178.0) no description available & (reliability: 526.0) & (original description: Putative RPL11, Description = 50S ribosomal protein L11, chloroplastic, PFAM = PF03946;PF00298)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'nbv0.3scaffold70830_7009-9112' '(at1g70190 : 186.0) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (gnl|cdd|36927 : 150.0) no description available & (gnl|cdd|80553 : 90.6) no description available & (reliability: 372.0) & (original description: Putative PRPL12, Description = PRPL12 Chloroplast ribosomal protein L12, PFAM = PF00542;PF16320)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'nbv0.3scaffold72418_1818-4375' '(p36688|rk12_nicsy : 223.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (at3g27830 : 154.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|36927 : 128.0) no description available & (gnl|cdd|79300 : 121.0) no description available & (reliability: 308.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben044scf00050091ctg005_23671-26252' '(gnl|cdd|36927 : 140.0) no description available & (at3g06040 : 137.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 83.2) no description available & (reliability: 274.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01676_63715-66326' '(gnl|cdd|36927 : 147.0) no description available & (gnl|cdd|80553 : 101.0) no description available & (at1g70190 : 87.8) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (reliability: 175.6) & (original description: Putative BnaC07g51160D, Description = BnaC07g51160D protein, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01695_653899-656543' '(at1g70190 : 186.0) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (gnl|cdd|36927 : 152.0) no description available & (gnl|cdd|80553 : 91.3) no description available & (reliability: 372.0) & (original description: Putative PRPL12, Description = PRPL12 Chloroplast ribosomal protein L12, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01912_150303-152860' '(p36688|rk12_nicsy : 176.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|79300 : 121.0) no description available & (gnl|cdd|36927 : 119.0) no description available & (at3g27830 : 116.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf04633_238077-240634' '(p36688|rk12_nicsy : 197.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (at3g27830 : 139.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|79300 : 119.0) no description available & (gnl|cdd|36927 : 116.0) no description available & (reliability: 278.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf05764_288484-291095' '(gnl|cdd|36927 : 147.0) no description available & (gnl|cdd|80553 : 102.0) no description available & (at1g70190 : 89.7) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (reliability: 179.4) & (original description: Putative BnaC07g51160D, Description = BnaC07g51160D protein, PFAM = PF00542;PF16320)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf06349_262478-273759' '(p24929|rk12_tobac : 211.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana tabacum (Common tobacco) & (at3g27850 : 155.0) 50S ribosomal protein L12-C; ribosomal protein L12-C (RPL12-C); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: defense response to bacterium, translation; LOCATED IN: in 6 components; EXPRESSED IN: juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-A (TAIR:AT3G27830.1); Has 8543 Blast hits to 8543 proteins in 2749 species: Archae - 0; Bacteria - 5675; Metazoa - 193; Fungi - 132; Plants - 248; Viruses - 0; Other Eukaryotes - 2295 (source: NCBI BLink). & (gnl|cdd|36927 : 125.0) no description available & (gnl|cdd|79300 : 124.0) no description available & (reliability: 310.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf12662_53262-55852' '(gnl|cdd|36927 : 139.0) no description available & (at3g06040 : 131.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 82.5) no description available & (reliability: 262.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T
'29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf13856_49147-51728' '(gnl|cdd|36927 : 142.0) no description available & (at3g06040 : 132.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 81.3) no description available & (reliability: 264.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T
'29.2.1.1.1.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13' 'niben101scf04528_506753-511720' '(at1g78630 : 341.0) embryo defective 1473 (emb1473); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2); Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248; Bacteria - 5258; Metazoa - 358; Fungi - 293; Plants - 251; Viruses - 0; Other Eukaryotes - 2317 (source: NCBI BLink). & (p12629|rk13_spiol : 304.0) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (gnl|cdd|82862 : 220.0) no description available & (gnl|cdd|38413 : 183.0) no description available & (reliability: 682.0) & (original description: Putative rplM, Description = 50S ribosomal protein L13, PFAM = PF00572)' T
'29.2.1.1.1.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13' 'niben101scf06437_169556-174635' '(at1g78630 : 338.0) embryo defective 1473 (emb1473); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2); Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248; Bacteria - 5258; Metazoa - 358; Fungi - 293; Plants - 251; Viruses - 0; Other Eukaryotes - 2317 (source: NCBI BLink). & (p12629|rk13_spiol : 304.0) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (gnl|cdd|82862 : 221.0) no description available & (gnl|cdd|38413 : 182.0) no description available & (reliability: 676.0) & (original description: Putative RPL13, Description = 50S ribosomal protein L13, chloroplastic, PFAM = PF00572)' T
'29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'nbv0.5scaffold4427_261197-261711' '(p06382|rk14_tobac : 224.0) Chloroplast 50S ribosomal protein L14 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79274 : 224.0) no description available & (atcg00780 : 213.0) encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex; ribosomal protein L14 (RPL14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2). & (gnl|cdd|36119 : 124.0) no description available & (reliability: 426.0) & (original description: Putative rpl14, Description = 50S ribosomal protein L14, chloroplastic, PFAM = PF00238)' T
'29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'niben101scf00568_496740-498186' '(p06382|rk14_tobac : 210.0) Chloroplast 50S ribosomal protein L14 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79274 : 205.0) no description available & (atcg00780 : 200.0) encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex; ribosomal protein L14 (RPL14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2). & (gnl|cdd|36119 : 117.0) no description available & (reliability: 400.0) & (original description: Putative rpl14, Description = 50S ribosomal protein L14, chloroplastic, PFAM = PF00238)' T
'29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'niben101scf06211_150954-154209' '(gnl|cdd|79262 : 168.0) no description available & (p06384|rk16_tobac : 162.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 149.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 101.0) no description available & (reliability: 276.0) & (original description: Putative rplP, Description = 50S ribosomal protein L16, PFAM = PF00238;PF00252)' T
'29.2.1.1.1.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15' 'niben101scf03056_274515-281455' '(p31165|rk15_pea : 273.0) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (at3g25920 : 267.0) encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex; ribosomal protein L15 (RPL15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G64670.1); Has 7744 Blast hits to 7744 proteins in 2658 species: Archae - 15; Bacteria - 5386; Metazoa - 72; Fungi - 86; Plants - 90; Viruses - 0; Other Eukaryotes - 2095 (source: NCBI BLink). & (gnl|cdd|36064 : 162.0) no description available & (gnl|cdd|81651 : 153.0) no description available & (reliability: 534.0) & (original description: Putative RPL15, Description = 50S ribosomal protein L15, chloroplastic, PFAM = PF00828)' T
'29.2.1.1.1.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15' 'niben101scf15308_40318-48922' '(p31165|rk15_pea : 282.0) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (at3g25920 : 280.0) encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex; ribosomal protein L15 (RPL15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G64670.1); Has 7744 Blast hits to 7744 proteins in 2658 species: Archae - 15; Bacteria - 5386; Metazoa - 72; Fungi - 86; Plants - 90; Viruses - 0; Other Eukaryotes - 2095 (source: NCBI BLink). & (gnl|cdd|36064 : 163.0) no description available & (gnl|cdd|81651 : 156.0) no description available & (reliability: 560.0) & (original description: Putative RPL15, Description = 50S ribosomal protein L15, chloroplastic, PFAM = PF00828)' T
'29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'nbv0.3scaffold127012_1-1795' '(gnl|cdd|79262 : 225.0) no description available & (p06384|rk16_tobac : 221.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 205.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 149.0) no description available & (reliability: 410.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T
'29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'nbv0.5scaffold4427_261712-263168' '(gnl|cdd|79262 : 236.0) no description available & (p06384|rk16_tobac : 229.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 213.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 150.0) no description available & (reliability: 426.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T
'29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben044scf00007712ctg005_20287-22677' '(gnl|cdd|79262 : 186.0) no description available & (p06384|rk16_tobac : 184.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 171.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 114.0) no description available & (reliability: 342.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T
'29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben101scf06211_150954-154209' '(gnl|cdd|79262 : 168.0) no description available & (p06384|rk16_tobac : 162.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 149.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 101.0) no description available & (reliability: 298.0) & (original description: Putative rplP, Description = 50S ribosomal protein L16, PFAM = PF00238;PF00252)' T
'29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben101scf22792_321-1867' '(gnl|cdd|79262 : 235.0) no description available & (q8s8v6|rk16_atrbe : 224.0) Chloroplast 50S ribosomal protein L16 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00790 : 212.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 150.0) no description available & (reliability: 424.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T
'29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf00262_242969-247711' '(o80363|rk17_tobac : 276.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 236.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 181.0) no description available & (gnl|cdd|38490 : 160.0) no description available & (reliability: 472.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T
'29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf02320_117813-122448' '(o80363|rk17_tobac : 343.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 255.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 181.0) no description available & (gnl|cdd|38490 : 157.0) no description available & (reliability: 510.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T
'29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf17834_21435-25789' '(o80363|rk17_tobac : 308.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 258.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 179.0) no description available & (gnl|cdd|38490 : 155.0) no description available & (reliability: 516.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T
'29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'nbv0.5scaffold6380_58298-64361' '(at1g48350 : 189.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|81652 : 156.0) no description available & (q8say0|rk18_orysa : 149.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative rplR, Description = 50S ribosomal protein L18, PFAM = PF00861)' T
'29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'niben101scf01066_637032-643083' '(at1g48350 : 212.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (q8say0|rk18_orysa : 171.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (gnl|cdd|81652 : 162.0) no description available & (reliability: 424.0) & (original description: Putative RPL18, Description = 50S ribosomal protein L18, chloroplastic, PFAM = PF00861)' T
'29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'niben101scf14374_12182-18031' '(at1g48350 : 213.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (q8say0|rk18_orysa : 171.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (gnl|cdd|81652 : 163.0) no description available & (reliability: 426.0) & (original description: Putative RPL18, Description = 50S ribosomal protein L18, chloroplastic, PFAM = PF00861)' T
'29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'nbv0.5scaffold394_246149-251238' '(at4g17560 : 167.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36911 : 153.0) no description available & (p82413|rk19_spiol : 146.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 106.0) no description available & (reliability: 334.0) & (original description: Putative RPL19, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T
'29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben044scf00032684ctg001_4476-9305' '(at4g17560 : 176.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p82413|rk19_spiol : 155.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|36911 : 151.0) no description available & (gnl|cdd|81533 : 105.0) no description available & (reliability: 352.0) & (original description: Putative RPL19, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T
'29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben101scf00428_1533573-1538662' '(at4g17560 : 164.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36911 : 150.0) no description available & (p82413|rk19_spiol : 146.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 106.0) no description available & (reliability: 328.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T
'29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben101scf00574_1113943-1122636' '(at4g11630 : 208.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|36911 : 155.0) no description available & (p82413|rk19_spiol : 128.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 105.0) no description available & (reliability: 406.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, PFAM = PF01245)' T
'29.2.1.1.1.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L20' 'nbv0.3scaffold81277_1-1461' '(q68ry3|rk20_pangi : 143.0) Chloroplast 50S ribosomal protein L20 - Panax ginseng (Korean ginseng) & (gnl|cdd|79285 : 134.0) no description available & (atcg00660 : 112.0) encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex; ribosomal protein L20 (RPL20); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L20 (TAIR:AT1G16740.1). & (gnl|cdd|39905 : 89.2) no description available & (reliability: 224.0) & (original description: Putative rpl20, Description = 50S ribosomal protein L20, chloroplastic, PFAM = PF00453)' T
'29.2.1.1.1.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L20' 'niben101scf08684_450489-452012' '(q7fns5|rk20_atrbe : 150.0) Chloroplast 50S ribosomal protein L20 - Atropa belladonna (Belladonna) (Deadly nightshade) & (gnl|cdd|79285 : 146.0) no description available & (atcg00660 : 111.0) encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex; ribosomal protein L20 (RPL20); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L20 (TAIR:AT1G16740.1). & (gnl|cdd|39905 : 103.0) no description available & (reliability: 222.0) & (original description: Putative rpl20, Description = 50S ribosomal protein L20, chloroplastic, PFAM = PF00453)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben044scf00027671ctg004_1-3627' '(p24613|rk21_spiol : 144.0) 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) & (at1g35680 : 139.0) Ribosomal protein L21; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cold, translation; LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT4G30930.1); Has 7103 Blast hits to 7101 proteins in 2544 species: Archae - 0; Bacteria - 5138; Metazoa - 96; Fungi - 4; Plants - 134; Viruses - 0; Other Eukaryotes - 1731 (source: NCBI BLink). & (gnl|cdd|36899 : 124.0) no description available & (gnl|cdd|85055 : 100.0) no description available & (reliability: 278.0) & (original description: Putative rplU, Description = 50S ribosomal protein L21, PFAM = PF00829)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben044scf00048542ctg000_7329-11694' '(gnl|cdd|36899 : 139.0) no description available & (at4g30930 : 133.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85055 : 101.0) no description available & (reliability: 266.0) & (original description: Putative NFD1, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf00016_470787-477169' '(at1g35680 : 156.0) Ribosomal protein L21; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cold, translation; LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT4G30930.1); Has 7103 Blast hits to 7101 proteins in 2544 species: Archae - 0; Bacteria - 5138; Metazoa - 96; Fungi - 4; Plants - 134; Viruses - 0; Other Eukaryotes - 1731 (source: NCBI BLink). & (p24613|rk21_spiol : 154.0) 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) & (gnl|cdd|36899 : 138.0) no description available & (gnl|cdd|85055 : 122.0) no description available & (reliability: 312.0) & (original description: Putative RPL21, Description = 50S ribosomal protein L21, chloroplastic, PFAM = PF00829)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf01015_149400-159520' '(at4g30930 : 194.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36899 : 154.0) no description available & (gnl|cdd|85055 : 124.0) no description available & (reliability: 388.0) & (original description: Putative RPL21M, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf01015_158747-163630' '(gnl|cdd|36899 : 137.0) no description available & (at4g30930 : 132.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85055 : 100.0) no description available & (reliability: 264.0) & (original description: Putative NFD1, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T
'29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf04899_358115-367502' '(at4g30930 : 191.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36899 : 156.0) no description available & (gnl|cdd|85055 : 123.0) no description available & (reliability: 382.0) & (original description: Putative RPL21M, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'nbv0.3scaffold134183_1-1494' '(p06389|rk22_tobac : 265.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 192.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 183.0) no description available & (gnl|cdd|36923 : 108.0) no description available & (reliability: 384.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'nbv0.5scaffold5903_124181-126633' '(p06389|rk22_tobac : 275.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 199.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 192.0) no description available & (gnl|cdd|36923 : 118.0) no description available & (reliability: 398.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben044scf00020983ctg007_3852-9275' '(at4g28360 : 284.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 128.0) no description available & (gnl|cdd|48343 : 107.0) no description available & (reliability: 568.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf00711_129787-134779' '(at4g28360 : 276.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 132.0) no description available & (gnl|cdd|80704 : 110.0) no description available & (reliability: 552.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf01409_1327642-1334303' '(at4g28360 : 271.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 131.0) no description available & (gnl|cdd|48343 : 107.0) no description available & (reliability: 542.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf06840_16836-18572' '(p06389|rk22_tobac : 266.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 201.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 199.0) no description available & (gnl|cdd|36923 : 118.0) no description available & (reliability: 402.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T
'29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf11123_142130-146566' '(at4g28360 : 285.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 129.0) no description available & (gnl|cdd|80704 : 110.0) no description available & (reliability: 570.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T
'29.2.1.1.1.2.23' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L23' 'nbv0.5scaffold2861_125273-127551' '(gnl|cdd|79248 : 180.0) no description available & (p06391|rk23_tobac : 177.0) Chloroplast 50S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (atcg01300 : 173.0) One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex; ribosomal protein L23 (RPL23.2); CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); BEST Arabidopsis thaliana protein match is: ribosomal protein L23.1 (TAIR:ATCG00840.1). & (reliability: 346.0) & (original description: Putative rpl23, Description = 50S ribosomal protein L23, chloroplastic, PFAM = PF00276)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'nbv0.3scaffold12279_37723-40834' '(at5g23535 : 162.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF17136)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'nbv0.5scaffold2904_182464-189970' '(at5g23535 : 243.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80439 : 109.0) no description available & (gnl|cdd|36920 : 98.6) no description available & (reliability: 486.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467;PF17136)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf00858_173495-177452' '(q02764|rk24_tobac : 251.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 211.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 172.0) no description available & (gnl|cdd|80439 : 121.0) no description available & (reliability: 422.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF00467;PF17136)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf02262_143707-151033' '(q02764|rk24_tobac : 242.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 187.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 165.0) no description available & (gnl|cdd|80439 : 123.0) no description available & (reliability: 374.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF00467;PF17136)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf02262_144041-150479' '(q02764|rk24_tobac : 139.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 111.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 103.0) no description available & (reliability: 222.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf04488_47821-55584' '(at5g23535 : 246.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80439 : 110.0) no description available & (gnl|cdd|36920 : 99.0) no description available & (reliability: 492.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467;PF17136)' T
'29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf15437_339018-343351' '(q02764|rk24_tobac : 286.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 215.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 170.0) no description available & (gnl|cdd|80439 : 120.0) no description available & (reliability: 430.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF17136;PF00467)' T
'29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'nbv0.3scaffold18202_30885-34535' '(at5g15220 : 201.0) Ribosomal protein L27 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39800 : 152.0) no description available & (gnl|cdd|81588 : 132.0) no description available & (p30155|rk27_tobac : 98.2) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (reliability: 402.0) & (original description: Putative rpmA, Description = 50S ribosomal protein L27, PFAM = PF01016)' T
'29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'niben101ctg11520_1-1302' '(at5g15220 : 189.0) Ribosomal protein L27 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39800 : 146.0) no description available & (gnl|cdd|81588 : 129.0) no description available & (p30155|rk27_tobac : 94.7) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (reliability: 378.0) & (original description: Putative rpmA, Description = 50S ribosomal protein L27, PFAM = PF01016)' T
'29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'niben101scf00167_284292-289956' '(p30155|rk27_tobac : 262.0) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (at5g40950 : 213.0) ribosomal protein large subunit 27 (RPL27); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: thylakoid, ribosome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39800 : 163.0) no description available & (gnl|cdd|81588 : 149.0) no description available & (reliability: 426.0) & (original description: Putative RPL27, Description = 50S ribosomal protein L27, chloroplastic, PFAM = PF01016)' T
'29.2.1.1.1.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28' 'niben044scf00055221ctg000_1-3127' '(p30956|rk28_tobac : 221.0) 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco) & (at2g33450 : 154.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 3594 Blast hits to 3594 proteins in 1265 species: Archae - 0; Bacteria - 2589; Metazoa - 1; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80633 : 86.4) no description available & (reliability: 308.0) & (original description: Putative RPL28, Description = 50S ribosomal protein L28, chloroplastic, PFAM = PF00830)' T
'29.2.1.1.1.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28' 'niben101scf00367_955437-964214' '(p30956|rk28_tobac : 227.0) 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco) & (at2g33450 : 150.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 3594 Blast hits to 3594 proteins in 1265 species: Archae - 0; Bacteria - 2589; Metazoa - 1; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80633 : 85.7) no description available & (reliability: 300.0) & (original description: Putative RPL28, Description = 50S ribosomal protein L28, chloroplastic, PFAM = PF00830)' T
'29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'nbv0.3scaffold17937_2286-5304' '(at5g65220 : 135.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 270.0) & (original description: Putative rpl29, Description = 50S ribosomal protein L29, PFAM = PF00831)' T
'29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf04286_176252-181065' '(at5g65220 : 135.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 270.0) & (original description: Putative RPL29, Description = 50S ribosomal protein L29, PFAM = PF00831)' T
'29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf07165_59470-62954' '(at5g65220 : 141.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 124.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 282.0) & (original description: Putative Os02g0754300, Description = Os02g0754300 protein, PFAM = PF00831)' T
'29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf20576_185119-188820' '(at5g65220 : 143.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 286.0) & (original description: Putative RPL29, Description = 50S ribosomal protein L29, chloroplastic, PFAM = PF00831)' T
'29.2.1.1.1.2.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L31' 'niben044scf00003320ctg003_52738-55002' '(at1g75350 : 169.0) embryo defective 2184 (emb2184); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 1009 Blast hits to 1009 proteins in 370 species: Archae - 0; Bacteria - 720; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|79348 : 84.2) no description available & (reliability: 338.0) & (original description: Putative RPL31, Description = 50S ribosomal protein L31, chloroplastic, PFAM = PF01197)' T
'29.2.1.1.1.2.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L31' 'niben101scf04113_170284-172757' '(at1g75350 : 166.0) embryo defective 2184 (emb2184); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 1009 Blast hits to 1009 proteins in 370 species: Archae - 0; Bacteria - 720; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|79348 : 82.3) no description available & (reliability: 332.0) & (original description: Putative RPL31, Description = 50S ribosomal protein L31, chloroplastic, PFAM = PF01197)' T
'29.2.1.1.1.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L32' '' ''
'29.2.1.1.1.2.33' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L33' 'niben101scf11178_184527-185941' '(q7fns6|rk33_atrbe : 117.0) Chloroplast 50S ribosomal protein L33 - Atropa belladonna (Belladonna) (Deadly nightshade) & (gnl|cdd|79318 : 115.0) no description available & (atcg00640 : 107.0) encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex; ribosomal protein L33 (RPL33); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L33 (InterPro:IPR001705), Ribosomal protein L33, conserved site (InterPro:IPR018264). & (reliability: 214.0) & (original description: Putative rpl33, Description = 50S ribosomal protein L33, chloroplastic, PFAM = PF00471)' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'nbv0.3scaffold5327_15730-21604' '(at5g15260 : 81.3) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative At5g15260, Description = Ribosomal protein L34e superfamily protein, PFAM = )' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben044scf00024259ctg010_1584-6107' '(at1g29070 : 84.3) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271); Has 615 Blast hits to 615 proteins in 261 species: Archae - 0; Bacteria - 556; Metazoa - 0; Fungi - 11; Plants - 33; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative RPL34, Description = 50S ribosomal protein L34, chloroplastic, PFAM = PF00468)' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben044scf00027156ctg000_11122-16955' '(at3g06180 : 192.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g19025, Description = Uncharacterized protein At5g19025, PFAM = )' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf00155_221945-224613' '(at3g06180 : 82.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative Sb03g037880, Description = Putative uncharacterized protein Sb03g037880, PFAM = )' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf03393_41648-48415' '(at3g06180 : 190.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaAnng03100D, Description = BnaAnng03100D protein, PFAM = )' T
'29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf10328_62796-66923' '(at1g29070 : 84.7) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271); Has 615 Blast hits to 615 proteins in 261 species: Archae - 0; Bacteria - 556; Metazoa - 0; Fungi - 11; Plants - 33; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative RPL34, Description = 50S ribosomal protein L34, chloroplastic, PFAM = PF00468)' T
'29.2.1.1.1.2.36' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L36' '' ''
'29.2.1.1.1.2.40' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L40' '' ''
'29.2.1.1.1.2.85' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.PSRP5' '' ''
'29.2.1.1.1.2.86' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.PSRP6' '' ''
'29.2.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion' '' ''
'29.2.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit' '' ''
'29.2.1.1.2.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S2' '' ''
'29.2.1.1.2.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3' 'nbv0.5scaffold4021_97782-100196' '(q04716|rt03_pethy : 121.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 82.5) no description available & (reliability: 176.4) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00252;PF00189)' T
'29.2.1.1.2.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3' 'niben044scf00001006ctg004_1-1879' '(q04716|rt03_pethy : 120.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 80.6) no description available & (reliability: 173.4) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T
'29.2.1.1.2.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S4' 'nbv0.5scaffold10545_2332-5453' '(atmg00290 : 473.0) encodes a mitochondrial ribosomal protein S4, a constituent of the small subunit of the ribosomal complex; mitochondrial ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, mitochondrial small ribosomal subunit; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (TAIR:AT2G07734.1). & (p26866|rt04_marpo : 101.0) Mitochondrial ribosomal protein S4 - Marchantia polymorpha (Liverwort) & (reliability: 946.0) & (original description: Putative rps4, Description = Ribosomal protein S4, PFAM = PF01479)' T
'29.2.1.1.2.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S7' '' ''
'29.2.1.1.2.1.8' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S8' '' ''
'29.2.1.1.2.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S10' 'niben044scf00028044ctg001_8500-11140' '(p51428|rt10_pea : 152.0) Mitochondrial ribosomal protein S10 - Pisum sativum (Garden pea) & (at3g22300 : 113.0) Nuclear-encoded gene for mitochondrial ribosomal small subunit protein S10; ribosomal protein S10 (RPS10); CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 1 (TAIR:AT3G22310.1); Has 2936 Blast hits to 2936 proteins in 744 species: Archae - 0; Bacteria - 1485; Metazoa - 4; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative RPS10, Description = Ribosomal protein S10, mitochondrial, PFAM = PF00338)' T
'29.2.1.1.2.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S10' 'niben101scf08870_85370-88500' '(p51428|rt10_pea : 155.0) Mitochondrial ribosomal protein S10 - Pisum sativum (Garden pea) & (at3g22300 : 115.0) Nuclear-encoded gene for mitochondrial ribosomal small subunit protein S10; ribosomal protein S10 (RPS10); CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 1 (TAIR:AT3G22310.1); Has 2936 Blast hits to 2936 proteins in 744 species: Archae - 0; Bacteria - 1485; Metazoa - 4; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RPS10, Description = Ribosomal protein S10, mitochondrial, PFAM = PF00338)' T
'29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'nbv0.5scaffold140_650356-655738' '(at1g31817 : 155.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T
'29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben044scf00022982ctg004_11304-16677' '(at1g31817 : 160.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T
'29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben101scf02346_690000-694392' '(at1g31817 : 161.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative rps11, Description = Small subunit ribosomal protein, PFAM = PF00411)' T
'29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben101scf03293_232043-237054' '(at1g31817 : 155.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T
'29.2.1.1.2.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S12' '' ''
'29.2.1.1.2.1.13' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S13' '' ''
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'nbv0.3scaffold55479_5046-7739' '(p49387|rt14_brana : 101.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 87.8) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = )' T
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'nbv0.5scaffold14524_1421-1999' '(p49387|rt14_brana : 115.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 111.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = PF00253)' T
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf02309_397852-400208' '(p49387|rt14_brana : 112.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 109.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = PF00253)' T
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf03643_252831-256041' '(atmg00220 : 469.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 463.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|29347 : 207.0) no description available & (gnl|cdd|39862 : 202.0) no description available & (reliability: 938.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf05363_450256-452579' '(at2g34520 : 132.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (p14875|rt14_oenbe : 131.0) Mitochondrial ribosomal protein S14 - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|82740 : 97.9) no description available & (gnl|cdd|36952 : 92.7) no description available & (reliability: 264.0) & (original description: Putative RPS14, Description = Ribosomal protein S14, mitochondrial, PFAM = PF00253)' T
'29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf07635_3146-6096' '(atmg00220 : 709.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 701.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|31481 : 292.0) no description available & (gnl|cdd|39862 : 277.0) no description available & (reliability: 1418.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T
'29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'nbv0.5scaffold4021_97782-100196' '(q04716|rt03_pethy : 121.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 82.5) no description available & (reliability: 185.6) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00252;PF00189)' T
'29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben044scf00001006ctg004_1-1879' '(q04716|rt03_pethy : 120.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 80.6) no description available & (reliability: 185.6) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T
'29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben101scf02165_272425-274937' '(atmg00080 : 286.0) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (p46801|rm16_orysa : 268.0) Mitochondrial 60S ribosomal protein L16 - Oryza sativa (Rice) & (gnl|cdd|38632 : 187.0) no description available & (gnl|cdd|84645 : 149.0) no description available & (reliability: 572.0) & (original description: Putative RPL16, Description = 60S ribosomal protein L16, mitochondrial, PFAM = PF00252)' T
'29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben101scf05605_13633-42113' '(q04716|rt03_pethy : 114.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 98.6) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (reliability: 197.2) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T
'29.2.1.1.2.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S19' '' ''
'29.2.1.1.2.1.27' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S27' 'niben101scf00035_169775-172080' '(at5g44710 : 107.0) CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|40041 : 84.0) no description available & (gnl|cdd|71726 : 83.1) no description available & (reliability: 214.0) & (original description: Putative At5g44710, Description = Putative uncharacterized protein At5g44710, PFAM = PF08293)' T
'29.2.1.1.2.1.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S29' 'niben101scf09101_379865-390804' '(at1g16870 : 561.0) mitochondrial 28S ribosomal protein S29-related; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23/S29, mitochondrial (InterPro:IPR019368); Has 239 Blast hits to 239 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39131 : 303.0) no description available & (reliability: 1122.0) & (original description: Putative F6I1.13, Description = Mitochondrial 28S ribosomal protein S29-like protein, PFAM = PF10236)' T
'29.2.1.1.2.1.31' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S31' '' ''
'29.2.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit' '' ''
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'nbv0.5scaffold5861_21838-26712' '(atmg00560 : 446.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 321.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 170.0) no description available & (gnl|cdd|82961 : 84.7) no description available & (reliability: 892.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'nbv0.5scaffold9112_20800-23195' '(p68535|rt12_pethy : 200.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 189.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 171.0) no description available & (gnl|cdd|36961 : 159.0) no description available & (reliability: 378.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf03953_265826-268230' '(p68535|rt12_pethy : 207.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 196.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 173.0) no description available & (gnl|cdd|36961 : 163.0) no description available & (reliability: 392.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf06770_32013-34957' '(atmg00560 : 112.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 112.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = PF00181)' T
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf10732_205517-210577' '(atmg00560 : 456.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 315.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 175.0) no description available & (gnl|cdd|82961 : 80.1) no description available & (reliability: 912.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T
'29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf10732_205961-208398' '(atmg00560 : 130.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 91.3) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = )' T
'29.2.1.1.2.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L5' 'niben101scf02309_397262-399907' '(p51409|rm05_soltu : 328.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 303.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 606.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T
'29.2.1.1.2.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L5' 'niben101scf25294_1-1245' '(p51409|rm05_soltu : 305.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 276.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 552.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T
'29.2.1.1.2.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L6' '' ''
'29.2.1.1.2.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L11' '' ''
'29.2.1.1.2.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L16' '' ''
'29.2.1.1.2.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L21' '' ''
'29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'nbv0.3scaffold11173_38112-44265' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 144.0) no description available & (gnl|cdd|70449 : 103.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T
'29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben044scf00029881ctg003_20023-29968' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 145.0) no description available & (gnl|cdd|70449 : 107.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T
'29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben101scf01463_501839-512101' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 142.0) no description available & (gnl|cdd|70449 : 106.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T
'29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben101scf02237_367118-373462' '(at1g07830 : 164.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 132.0) no description available & (gnl|cdd|70449 : 92.0) no description available & (reliability: 328.0) & (original description: Putative ACYPI007741, Description = 39S ribosomal protein L47, mitochondrial, PFAM = PF06984)' T
'29.2.1.1.2.2.37' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L37' 'niben101scf05566_102177-104572' '(at3g01740 : 147.0) Mitochondrial ribosomal protein L37; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L37 (TAIR:AT5G14290.1); Has 178 Blast hits to 178 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 40; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38645 : 113.0) no description available & (gnl|cdd|71987 : 91.6) no description available & (reliability: 294.0) & (original description: Putative At5g14290, Description = Mitochondrial ribosomal protein L37, PFAM = PF08561)' T
'29.2.1.1.2.51' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.L51/S25/CI-B8' 'nbv0.3scaffold16553_6388-12290' '(at3g59650 : 167.0) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (gnl|cdd|38655 : 129.0) no description available & (reliability: 334.0) & (original description: Putative Sb01g043440, Description = Putative uncharacterized protein Sb01g043440, PFAM = )' T
'29.2.1.1.2.51' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.L51/S25/CI-B8' 'niben101scf04686_34572-40474' '(at3g59650 : 197.0) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (gnl|cdd|38655 : 153.0) no description available & (reliability: 394.0) & (original description: Putative MRPL43, Description = Large subunit ribosomal protein L43, mitochondrial, PFAM = PF05047)' T
'29.2.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar' '' ''
'29.2.1.1.3.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit' '' ''
'29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'nbv0.5scaffold3671_213012-220316' '(p29344|rr1_spiol : 581.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 548.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (gnl|cdd|82218 : 317.0) no description available & (reliability: 1096.0) & (original description: Putative RPS1, Description = 30S ribosomal protein S1, chloroplastic, PFAM = PF00575;PF00575;PF00575)' T
'29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'niben101scf03840_187139-201195' '(p29344|rr1_spiol : 579.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 545.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (gnl|cdd|82218 : 315.0) no description available & (reliability: 1090.0) & (original description: Putative rps1, Description = 30S ribosomal protein S1, PFAM = PF00575;PF00575;PF00575)' T
'29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'niben101scf08308_337799-345088' '(at1g71720 : 490.0) Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 12228 Blast hits to 10737 proteins in 2456 species: Archae - 10; Bacteria - 9648; Metazoa - 36; Fungi - 16; Plants - 190; Viruses - 0; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|82218 : 132.0) no description available & (p29344|rr1_spiol : 115.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (reliability: 980.0) & (original description: Putative RLSB, Description = Plastid S1 binding domain protein, PFAM = PF00575;PF00575)' T
'29.2.1.1.3.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S4' 'nbv0.5scaffold10545_2332-5453' '(atmg00290 : 473.0) encodes a mitochondrial ribosomal protein S4, a constituent of the small subunit of the ribosomal complex; mitochondrial ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, mitochondrial small ribosomal subunit; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (TAIR:AT2G07734.1). & (p26866|rt04_marpo : 101.0) Mitochondrial ribosomal protein S4 - Marchantia polymorpha (Liverwort) & (reliability: 946.0) & (original description: Putative rps4, Description = Ribosomal protein S4, PFAM = PF01479)' T
'29.2.1.1.3.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S5' 'niben101scf00451_349357-356011' '(at1g64880 : 503.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, Golgi apparatus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal (InterPro:IPR013810); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT2G33800.1); Has 12743 Blast hits to 11445 proteins in 2840 species: Archae - 327; Bacteria - 5337; Metazoa - 1616; Fungi - 508; Plants - 194; Viruses - 58; Other Eukaryotes - 4703 (source: NCBI BLink). & (gnl|cdd|37857 : 164.0) no description available & (gnl|cdd|30447 : 146.0) no description available & (q9st69|rr5_spiol : 80.5) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1006.0) & (original description: Putative At1g64880, Description = At1g64880, PFAM = PF00333;PF03719)' T
'29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'nbv0.5scaffold1935_254449-257794' '(at3g18760 : 164.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 99.6) no description available & (reliability: 328.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T
'29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben044scf00037043ctg010_26776-31559' '(at3g17170 : 266.0) REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 13593 Blast hits to 10425 proteins in 2441 species: Archae - 19; Bacteria - 4805; Metazoa - 3511; Fungi - 908; Plants - 375; Viruses - 253; Other Eukaryotes - 3722 (source: NCBI BLink). & (gnl|cdd|80676 : 98.2) no description available & (reliability: 532.0) & (original description: Putative RFC3, Description = 30S ribosomal protein S6, PFAM = PF01250)' T
'29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben101scf05895_82476-86916' '(at3g18760 : 165.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 98.9) no description available & (reliability: 330.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T
'29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben101scf09178_226670-230889' '(at3g18760 : 159.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 93.5) no description available & (reliability: 318.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T
'29.2.1.1.3.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S7' '' ''
'29.2.1.1.3.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S9' '' ''
'29.2.1.1.3.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S10' '' ''
'29.2.1.1.3.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S11' '' ''
'29.2.1.1.3.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S12' 'nbv0.5scaffold9112_20800-23195' '(p68535|rt12_pethy : 200.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 189.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 171.0) no description available & (gnl|cdd|36961 : 159.0) no description available & (reliability: 378.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T
'29.2.1.1.3.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S12' 'niben101scf03953_265826-268230' '(p68535|rt12_pethy : 207.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 196.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 173.0) no description available & (gnl|cdd|36961 : 163.0) no description available & (reliability: 392.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T
'29.2.1.1.3.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S15' 'niben101scf06156_235274-264929' '(at1g80620 : 248.0) S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink). & (gnl|cdd|38026 : 150.0) no description available & (gnl|cdd|81667 : 92.4) no description available & (reliability: 496.0) & (original description: Putative rpsO, Description = 30S ribosomal protein S15, PFAM = PF00312)' T
'29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'nbv0.3scaffold4619_1750-6558' '(at5g56940 : 185.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 148.0) no description available & (gnl|cdd|80466 : 103.0) no description available & (reliability: 370.0) & (original description: Putative rpsP, Description = 30S ribosomal protein S16, PFAM = PF00886)' T
'29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'niben044scf00014890ctg002_51476-55073' '(at5g56940 : 117.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 97.7) no description available & (reliability: 234.0) & (original description: Putative rpsP, Description = 30S ribosomal protein S16, PFAM = PF00886)' T
'29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'niben101scf01340_192260-204484' '(at5g56940 : 191.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 148.0) no description available & (gnl|cdd|80466 : 103.0) no description available & (reliability: 382.0) & (original description: Putative rps16, Description = 30S ribosomal protein S16, PFAM = PF00886)' T
'29.2.1.1.3.1.17' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S17' '' ''
'29.2.1.1.3.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S18' 'niben101scf01660_289111-293904' '(at1g07210 : 176.0) Ribosomal protein S18; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18 (InterPro:IPR001648); Has 5527 Blast hits to 5527 proteins in 2078 species: Archae - 0; Bacteria - 4261; Metazoa - 44; Fungi - 19; Plants - 203; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative BnaA10g04660D, Description = BnaA10g04660D protein, PFAM = PF01084)' T
'29.2.1.1.3.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S19' '' ''
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'nbv0.5scaffold5963_85983-89636' '(at3g27160 : 125.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben044scf00050087ctg005_1734-6182' '(at3g27160 : 127.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben044scf00057730ctg000_1-3155' '(at3g27160 : 119.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf00109_852175-856488' '(at3g27160 : 124.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf04328_178681-188066' '(at3g27160 : 100.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GHS1, Description = GLUCOSE HYPERSENSITIVE 1 family protein, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf13057_35383-50869' '(at3g27160 : 115.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T
'29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf15120_198847-204001' '(at3g27160 : 83.2) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative rps21, Description = At5g63300, PFAM = PF01165)' T
'29.2.1.1.3.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit' '' ''
'29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'nbv0.3scaffold44532_6698-17367' '(at2g42710 : 253.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 233.0) no description available & (gnl|cdd|36782 : 120.0) no description available & (q9le95|rk1_spiol : 113.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (reliability: 506.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T
'29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben044scf00004038ctg005_12183-18012' '(at2g42710 : 167.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 129.0) no description available & (q9le95|rk1_spiol : 83.6) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 82.0) no description available & (reliability: 334.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T
'29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben101scf06183_699383-705612' '(at2g42710 : 165.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 129.0) no description available & (q9le95|rk1_spiol : 84.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 82.4) no description available & (reliability: 330.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T
'29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben101scf17947_23774-40789' '(at2g42710 : 270.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 233.0) no description available & (q9le95|rk1_spiol : 125.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 120.0) no description available & (reliability: 540.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T
'29.2.1.1.3.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L2' 'niben101scf01688_280851-285006' '(gnl|cdd|82961 : 193.0) no description available & (at2g44065 : 179.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p92812|rm02_orysa : 163.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 126.0) no description available & (reliability: 358.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF03947)' T
'29.2.1.1.3.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L2' 'niben101scf04692_64071-66808' '(gnl|cdd|82961 : 192.0) no description available & (at2g44065 : 176.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p92812|rm02_orysa : 162.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 126.0) no description available & (reliability: 352.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF03947)' T
'29.2.1.1.3.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L3' '' ''
'29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'nbv0.5scaffold7481_53710-60779' '(at2g20060 : 450.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 279.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 97.1) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T
'29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben044scf00025441ctg015_4416-12591' '(at2g20060 : 448.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 277.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 96.7) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T
'29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf04007_309216-317391' '(at2g20060 : 448.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 276.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 96.3) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T
'29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf04007_312827-317035' '(at2g20060 : 324.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 222.0) no description available & (gnl|cdd|81519 : 218.0) no description available & (o49937|rk4_spiol : 84.0) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (reliability: 648.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T
'29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf22899_1410-6867' '(at2g20060 : 281.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 182.0) no description available & (gnl|cdd|81519 : 177.0) no description available & (o49937|rk4_spiol : 81.3) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (reliability: 562.0) & (original description: Putative MRPL4, Description = Mitochondrial ribosomal protein L4, PFAM = PF00573)' T
'29.2.1.1.3.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L9' 'niben044scf00013509ctg001_1-10506' '(at5g53070 : 214.0) Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39807 : 105.0) no description available & (reliability: 428.0) & (original description: Putative At5g53070, Description = Putative uncharacterized protein At5g53070, PFAM = PF01281)' T
'29.2.1.1.3.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L9' 'niben101scf00268_532515-541803' '(at5g53070 : 211.0) Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39807 : 102.0) no description available & (reliability: 422.0) & (original description: Putative At5g53070, Description = Putative uncharacterized protein At5g53070, PFAM = PF01281)' T
'29.2.1.1.3.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10' '' ''
'29.2.1.1.3.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L11' '' ''
'29.2.1.1.3.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L12' 'niben044scf00004415ctg004_13502-15965' '(at4g37660 : 129.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink). & (gnl|cdd|36927 : 121.0) no description available & (reliability: 258.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T
'29.2.1.1.3.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L12' 'niben101scf04607_250616-252896' '(at4g37660 : 130.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink). & (gnl|cdd|36927 : 124.0) no description available & (gnl|cdd|80553 : 82.5) no description available & (reliability: 260.0) & (original description: Putative RM12, Description = RM12, ribosomal protein 12 mitochondrial large ribosomal subunit, PFAM = PF00542)' T
'29.2.1.1.3.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L13' '' ''
'29.2.1.1.3.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L14' 'niben101scf02497_99984-104016' '(at5g46160 : 192.0) Ribosomal protein L14p/L23e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT1G17560.1); Has 9606 Blast hits to 9606 proteins in 3255 species: Archae - 313; Bacteria - 5457; Metazoa - 346; Fungi - 288; Plants - 818; Viruses - 0; Other Eukaryotes - 2384 (source: NCBI BLink). & (gnl|cdd|81625 : 157.0) no description available & (gnl|cdd|36119 : 124.0) no description available & (q9tl22|rk14_nepol : 112.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 384.0) & (original description: Putative HLP, Description = 50S ribosomal protein HLP, mitochondrial, PFAM = PF00238)' T
'29.2.1.1.3.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L15' 'niben044scf00032046ctg001_1425-3859' '(gnl|cdd|81651 : 107.0) no description available & (gnl|cdd|36064 : 85.4) no description available & (at5g64670 : 80.5) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative rplO, Description = 50S ribosomal protein L15, PFAM = PF00828)' T
'29.2.1.1.3.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L15' 'niben101scf06087_178016-190756' '(at5g64670 : 288.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36064 : 206.0) no description available & (gnl|cdd|81651 : 152.0) no description available & (reliability: 576.0) & (original description: Putative rplO, Description = 50S ribosomal protein L15, PFAM = PF00828)' T
'29.2.1.1.3.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L17' 'niben101scf08684_25364-34127' '(at5g64650 : 226.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38490 : 156.0) no description available & (gnl|cdd|81650 : 155.0) no description available & (o80363|rk17_tobac : 108.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (reliability: 452.0) & (original description: Putative rplQ, Description = 50S ribosomal protein L17, PFAM = PF01196)' T
'29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.3scaffold4889_42944-47909' '(at3g20230 : 220.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PGSC0003DMG400001680, Description = Ribosomal L18p/L5e family protein, PFAM = PF00861)' T
'29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.5scaffold434_180871-185063' '(at3g20230 : 212.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative At3g20230, Description = Ribosomal L18p/L5e family protein, PFAM = PF00861)' T
'29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.5scaffold6143_49325-53797' '(at3g20230 : 220.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative At3g20230, Description = AT3G20230 protein, PFAM = PF00861)' T
'29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'niben101scf02011_501796-504149' '(at5g27820 : 125.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative LOC100285735, Description = 50S ribosomal protein L18, PFAM = PF00861)' T
'29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'niben101scf16114_177917-180270' '(at5g27820 : 119.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative LOC100285735, Description = 50S ribosomal protein L18, PFAM = PF00861)' T
'29.2.1.1.3.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L19' 'niben101scf00574_1113943-1122636' '(at4g11630 : 208.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|36911 : 155.0) no description available & (p82413|rk19_spiol : 128.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 105.0) no description available & (reliability: 416.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, PFAM = PF01245)' T
'29.2.1.1.3.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20' 'nbv0.3scaffold10577_36438-47377' '(at1g16740 : 187.0) Ribosomal protein L20; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: ribosomal protein L20 (TAIR:ATCG00660.1); Has 8162 Blast hits to 8162 proteins in 2777 species: Archae - 0; Bacteria - 5193; Metazoa - 126; Fungi - 0; Plants - 621; Viruses - 0; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|81464 : 141.0) no description available & (gnl|cdd|39905 : 137.0) no description available & (p56352|rk20_chlvu : 91.3) Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) & (reliability: 374.0) & (original description: Putative rplT, Description = 50S ribosomal protein L20, PFAM = PF00453)' T
'29.2.1.1.3.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20' 'niben101scf00088_159207-164530' '(at1g16740 : 186.0) Ribosomal protein L20; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: ribosomal protein L20 (TAIR:ATCG00660.1); Has 8162 Blast hits to 8162 proteins in 2777 species: Archae - 0; Bacteria - 5193; Metazoa - 126; Fungi - 0; Plants - 621; Viruses - 0; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|81464 : 141.0) no description available & (gnl|cdd|39905 : 137.0) no description available & (p56352|rk20_chlvu : 91.3) Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) & (reliability: 372.0) & (original description: Putative rplT, Description = 50S ribosomal protein L20, PFAM = PF00453)' T
'29.2.1.1.3.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L22' '' ''
'29.2.1.1.3.2.25' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L25' 'niben101scf06277_400881-406516' '(at5g66860 : 275.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; INVOLVED IN: translation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT4G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81663 : 105.0) no description available & (reliability: 550.0) & (original description: Putative At5g66860, Description = Putative uncharacterized protein At5g66860, PFAM = PF14693)' T
'29.2.1.1.3.2.25' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L25' 'niben101scf07489_176101-180954' '(at5g66860 : 283.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; INVOLVED IN: translation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT4G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81663 : 108.0) no description available & (reliability: 566.0) & (original description: Putative At5g66860, Description = Putative uncharacterized protein At5g66860, PFAM = PF14693;PF01386)' T
'29.2.1.1.3.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L28' 'nbv0.3scaffold48330_1-7220' '(at4g31460 : 234.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|38488 : 177.0) no description available & (reliability: 468.0) & (original description: Putative MRPL28, Description = Putative mitochondrial ribosomal protein L28, PFAM = PF00830)' T
'29.2.1.1.3.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L28' 'niben101scf08729_353792-361509' '(at4g31460 : 236.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|38488 : 177.0) no description available & (reliability: 472.0) & (original description: Putative MRPL28, Description = Putative mitochondrial ribosomal protein L28, PFAM = PF00830)' T
'29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf01125_56223-61830' '(at5g55140 : 136.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T
'29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf01125_56378-58837' '(at5g55140 : 139.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T
'29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf02156_1453907-1456014' '(at5g55140 : 135.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T
'29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf03076_268888-276655' '(at5g55140 : 134.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T
'29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'nbv0.3scaffold25728_9518-15509' '(at1g26740 : 119.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative RPL32pA, Description = 50S ribosomal protein L32pA, PFAM = PF01783)' T
'29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'niben101scf04082_5194-17727' '(at1g26740 : 112.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative RPL32pA, Description = 50S ribosomal protein L32pA, PFAM = PF01783)' T
'29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'niben101scf05712_270568-276559' '(at1g26740 : 106.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative rpl32, Description = Ribosomal L32p protein family, PFAM = PF01783)' T
'29.2.1.1.3.2.33' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L33' '' ''
'29.2.1.1.3.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L34' 'niben101scf00870_1782023-1786571' '(at3g13882 : 124.0) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271), Ribosomal protein L34, conserved site (InterPro:IPR020939); Has 5121 Blast hits to 5121 proteins in 2273 species: Archae - 0; Bacteria - 4770; Metazoa - 9; Fungi - 67; Plants - 39; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative rpmH, Description = 50S ribosomal protein L34, PFAM = PF00468)' T
'29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'nbv0.3scaffold45769_2502-9541' '(at5g45590 : 115.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35 (InterPro:IPR021137); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At5g45590, Description = Putative uncharacterized protein At5g45590, PFAM = PF01632)' T
'29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf00261_236337-242925' '(at5g45590 : 106.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35 (InterPro:IPR021137); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At5g45590, Description = Putative uncharacterized protein At5g45590, PFAM = PF01632)' T
'29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf01166_1107252-1112721' '(at4g23620 : 312.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G66860.1). & (gnl|cdd|81663 : 108.0) no description available & (reliability: 624.0) & (original description: Putative BnaA08g15030D, Description = BnaA08g15030D protein, PFAM = PF01386;PF14693)' T
'29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf09742_121201-128306' '(p23326|rk35_spiol : 94.4) 50S ribosomal protein L35, chloroplast precursor (CL35) - Spinacia oleracea (Spinach) & (at2g24090 : 89.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35, conserved site (InterPro:IPR018265), Ribosomal protein L35, non-mitochondrial (InterPro:IPR001706), Ribosomal protein L35 (InterPro:IPR021137); Has 5391 Blast hits to 5391 proteins in 1946 species: Archae - 0; Bacteria - 4062; Metazoa - 6; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative RPL35, Description = 50S ribosomal protein L35, chloroplastic, PFAM = PF01632)' T
'29.2.1.1.3.2.36' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L36' 'niben101scf01233_71267-97926' '(at5g20180 : 102.0) Ribosomal protein L36; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36 (InterPro:IPR000473); Has 4494 Blast hits to 4494 proteins in 2031 species: Archae - 0; Bacteria - 3621; Metazoa - 52; Fungi - 76; Plants - 607; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative rpmJ, Description = 50S ribosomal protein L36, PFAM = PF00444)' T
'29.2.1.1.3.2.57' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L5/L7' '' ''
'29.2.1.1.3.2.99' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.unknown' '' ''
'29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben044scf00013207ctg001_2680-6993' '(at1g08360 : 339.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 678.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben044scf00038689ctg002_34281-38257' '(at1g08360 : 333.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 247.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 666.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf00085_307657-312830' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 249.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 670.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf02510_433985-438094' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 281.0) no description available & (q9sw75|rl10a_chlre : 248.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 670.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf04134_218521-222713' '(at5g22440 : 338.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 674.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.1.3.2.1015' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10/15' '' ''
'29.2.1.1.3.2.1185' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18/L5' 'niben101scf04549_191305-193727' '(at3g45020 : 183.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); Has 362 Blast hits to 362 proteins in 135 species: Archae - 0; Bacteria - 259; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BnaAnng03580D, Description = BnaAnng03580D protein, PFAM = PF00861)' T
'29.2.1.1.3.2.1712' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L7/L12' 'niben101scf00491_526340-531662' '(at1g68660 : 220.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); Has 122 Blast hits to 122 proteins in 49 species: Archae - 0; Bacteria - 62; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|84417 : 91.9) no description available & (reliability: 440.0) & (original description: Putative CPLS1, Description = ATP-dependent Clp protease adapter protein CLPS1, chloroplastic, PFAM = PF02617)' T
'29.2.1.1.3.99' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.unknown' '' ''
'29.2.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar' '' ''
'29.2.1.1.4.1' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar.30S subunit' '' ''
'29.2.1.1.4.2' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar.50S subunit' '' ''
'29.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic' '' ''
'29.2.1.2.1' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit' '' ''
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben044scf00010382ctg003_1-3552' '(at1g58684 : 404.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 233.0) no description available & (reliability: 808.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF00333;PF03719)' T
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf01491_297475-301613' '(at1g58380 : 405.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 341.0) no description available & (gnl|cdd|81274 : 237.0) no description available & (reliability: 810.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF03719;PF00333)' T
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf02637_179285-182714' '(at1g58684 : 404.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 232.0) no description available & (reliability: 808.0) & (original description: Putative rp29, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf02637_227131-230776' '(at1g58380 : 408.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 233.0) no description available & (reliability: 816.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF03719;PF00333)' T
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf09467_316636-320531' '(at1g58684 : 390.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 329.0) no description available & (gnl|cdd|81274 : 220.0) no description available & (reliability: 780.0) & (original description: Putative cdk9, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T
'29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf18396_60422-64952' '(at1g58380 : 405.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 340.0) no description available & (gnl|cdd|81274 : 234.0) no description available & (reliability: 810.0) & (original description: Putative RPS2, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T
'29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'nbv0.5scaffold6858_30031-34889' '(at5g35530 : 385.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 380.0) no description available & (gnl|cdd|30441 : 160.0) no description available & (reliability: 770.0) & (original description: Putative rps3, Description = 40S ribosomal protein S3, PFAM = PF00189;PF07650)' T
'29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'niben101scf02790_523981-543874' '(at5g35530 : 381.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 378.0) no description available & (gnl|cdd|30441 : 157.0) no description available & (reliability: 762.0) & (original description: Putative RPS3A, Description = 40S ribosomal protein S3-1, PFAM = PF07650;PF00189)' T
'29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'niben101scf05002_441561-446425' '(at5g35530 : 390.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 386.0) no description available & (gnl|cdd|30441 : 162.0) no description available & (reliability: 780.0) & (original description: Putative RPS3A, Description = 40S ribosomal protein S3-1, PFAM = PF07650;PF00189)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben044scf00033090ctg001_1-3078' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g07090 : 449.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G58420.1); Has 1386 Blast hits to 1386 proteins in 448 species: Archae - 256; Bacteria - 2; Metazoa - 428; Fungi - 188; Plants - 271; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|35599 : 413.0) no description available & (gnl|cdd|31660 : 298.0) no description available & (reliability: 898.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF16121;PF00467;PF00900;PF08071)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf02857_305609-309443' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g07090 : 448.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G58420.1); Has 1386 Blast hits to 1386 proteins in 448 species: Archae - 256; Bacteria - 2; Metazoa - 428; Fungi - 188; Plants - 271; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|35599 : 412.0) no description available & (gnl|cdd|31660 : 296.0) no description available & (reliability: 896.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF00900;PF00467;PF16121;PF08071)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf03156_47484-51103' '(p46300|rs4_soltu : 469.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 415.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF00467;PF08071;PF00900;PF16121)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf08698_256432-259886' '(p46300|rs4_soltu : 470.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 413.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF01479;PF00900;PF08071;PF00467;PF16121)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf14717_71963-75714' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 451.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 418.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 902.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF00467;PF16121;PF00900)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf17473_47906-52384' '(p46300|rs4_soltu : 468.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 415.0) no description available & (gnl|cdd|31660 : 300.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF00900;PF00467;PF16121)' T
'29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf32851_27378-31413' '(p46300|rs4_soltu : 473.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 455.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 417.0) no description available & (gnl|cdd|31660 : 307.0) no description available & (reliability: 910.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF01479;PF00467;PF16121;PF00900)' T
'29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf00749_436970-441209' '(o65731|rs5_cicar : 328.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 256.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative RPS5, Description = 40S ribosomal protein S5, PFAM = PF00177)' T
'29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf04288_117136-121374' '(o65731|rs5_cicar : 328.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 256.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative RPS5, Description = 40S ribosomal protein S5, PFAM = PF00177)' T
'29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf06848_1043366-1047179' '(o65731|rs5_cicar : 326.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 325.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 254.0) no description available & (gnl|cdd|81264 : 224.0) no description available & (reliability: 650.0) & (original description: Putative RPS5A, Description = 40S ribosomal protein S5-1, PFAM = PF00177)' T
'29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf13379_39804-43714' '(o65731|rs5_cicar : 327.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 255.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative rps5, Description = Ribosomal protein S5, PFAM = PF00177)' T
'29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben044scf00000439ctg003_4156-8457' '(q9m3v8|rs6_aspof : 344.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at4g31700 : 341.0) Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.; ribosomal protein S6 (RPS6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: growth, translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377); BEST Arabidopsis thaliana protein match is: Ribosomal protein S6e (TAIR:AT5G10360.1); Has 870 Blast hits to 868 proteins in 314 species: Archae - 19; Bacteria - 0; Metazoa - 402; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36859 : 286.0) no description available & (gnl|cdd|64928 : 177.0) no description available & (reliability: 682.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T
'29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf00360_118614-123028' '(q9m3v8|rs6_aspof : 336.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at4g31700 : 334.0) Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.; ribosomal protein S6 (RPS6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: growth, translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377); BEST Arabidopsis thaliana protein match is: Ribosomal protein S6e (TAIR:AT5G10360.1); Has 870 Blast hits to 868 proteins in 314 species: Archae - 19; Bacteria - 0; Metazoa - 402; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36859 : 287.0) no description available & (gnl|cdd|64928 : 177.0) no description available & (reliability: 668.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T
'29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf00478_701729-705733' '(q9m3v8|rs6_aspof : 340.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 339.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (gnl|cdd|36859 : 283.0) no description available & (gnl|cdd|64928 : 176.0) no description available & (reliability: 678.0) & (original description: Putative RPS6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T
'29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf03584_90449-94908' '(q9m3v8|rs6_aspof : 334.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 333.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (gnl|cdd|36859 : 285.0) no description available & (gnl|cdd|64928 : 178.0) no description available & (reliability: 666.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T
'29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf02881_37418-42023' '(q8lju5|rs7_orysa : 288.0) 40S ribosomal protein S7 - Oryza sativa (Rice) & (at1g48830 : 280.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38530 : 259.0) no description available & (gnl|cdd|85337 : 207.0) no description available & (reliability: 560.0) & (original description: Putative rps7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T
'29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf05545_15362-19645' '(at1g48830 : 295.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9xet4|rs7_secce : 292.0) 40S ribosomal protein S7 - Secale cereale (Rye) & (gnl|cdd|38530 : 270.0) no description available & (gnl|cdd|85337 : 212.0) no description available & (reliability: 590.0) & (original description: Putative RPS7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T
'29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf11491_242902-246761' '(at1g48830 : 288.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9xet4|rs7_secce : 287.0) 40S ribosomal protein S7 - Secale cereale (Rye) & (gnl|cdd|38530 : 269.0) no description available & (gnl|cdd|85337 : 211.0) no description available & (reliability: 576.0) & (original description: Putative RPS7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T
'29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf12394_194510-198253' '(at1g48830 : 288.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q8lju5|rs7_orysa : 285.0) 40S ribosomal protein S7 - Oryza sativa (Rice) & (gnl|cdd|38530 : 267.0) no description available & (gnl|cdd|85337 : 210.0) no description available & (reliability: 576.0) & (original description: Putative rps7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'nbv0.3scaffold68213_2820-5818' '(q08069|rs8_maize : 149.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 136.0) no description available & (at5g59240 : 131.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'nbv0.5scaffold1572_51751-54777' '(at5g06360 : 161.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38373 : 143.0) no description available & (reliability: 322.0) & (original description: Putative nsa2, Description = Ribosomal protein S8e, PFAM = )' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf00270_570981-576830' '(at5g06360 : 404.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38373 : 404.0) no description available & (gnl|cdd|32190 : 81.5) no description available & (reliability: 808.0) & (original description: Putative nsa2, Description = Ribosome biogenesis protein NSA2 homolog, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf02756_38841-43799' '(q08069|rs8_maize : 288.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 271.0) no description available & (at5g20290 : 270.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 540.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04436_353315-357799' '(p49199|rs8_orysa : 292.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (at5g59240 : 280.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|38493 : 273.0) no description available & (gnl|cdd|85302 : 140.0) no description available & (reliability: 560.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04444_155213-160550' '(gnl|cdd|38493 : 270.0) no description available & (q08069|rs8_maize : 268.0) 40S ribosomal protein S8 - Zea mays (Maize) & (at5g59240 : 260.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 520.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04551_181539-185560' '(q08069|rs8_maize : 274.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 267.0) no description available & (at5g59240 : 248.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 136.0) no description available & (reliability: 496.0) & (original description: Putative RPS8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf07428_150526-154993' '(p49199|rs8_orysa : 283.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (gnl|cdd|38493 : 265.0) no description available & (at5g20290 : 263.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 526.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf08447_174939-179590' '(q08069|rs8_maize : 293.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 274.0) no description available & (at5g20290 : 273.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 140.0) no description available & (reliability: 546.0) & (original description: Putative pco103958, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf10676_154664-159096' '(p49199|rs8_orysa : 284.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (gnl|cdd|38493 : 272.0) no description available & (at5g59240 : 271.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 140.0) no description available & (reliability: 542.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T
'29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'nbv0.3scaffold61018_7395-11626' '(at5g15200 : 297.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 244.0) no description available & (gnl|cdd|81277 : 150.0) no description available & (p49214|rs9_tobac : 107.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 594.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF00163;PF01479)' T
'29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'nbv0.5scaffold1116_189501-218671' '(at5g39850 : 238.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1); Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264; Bacteria - 730; Metazoa - 422; Fungi - 285; Plants - 4172; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|38511 : 206.0) no description available & (gnl|cdd|81277 : 120.0) no description available & (p49214|rs9_tobac : 106.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 476.0) & (original description: Putative rpS9, Description = 40S ribosomal protein S9, PFAM = PF01479)' T
'29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf00272_1187932-1193975' '(at5g15200 : 297.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 245.0) no description available & (gnl|cdd|81277 : 149.0) no description available & (p49214|rs9_tobac : 110.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 594.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T
'29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf04993_90518-95287' '(at5g15200 : 298.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 246.0) no description available & (gnl|cdd|81277 : 151.0) no description available & (p49214|rs9_tobac : 109.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 596.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T
'29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf05229_539657-544539' '(at5g39850 : 299.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1); Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264; Bacteria - 730; Metazoa - 422; Fungi - 285; Plants - 4172; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|38511 : 247.0) no description available & (gnl|cdd|81277 : 154.0) no description available & (p49214|rs9_tobac : 107.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 598.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T
'29.2.1.2.1.10' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10' 'niben101scf01689_449721-454849' '(gnl|cdd|38554 : 189.0) no description available & (at4g25740 : 181.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ayp4|rs10_orysa : 175.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (gnl|cdd|67137 : 170.0) no description available & (reliability: 362.0) & (original description: Putative RPS10A, Description = 40S ribosomal protein S10-1, PFAM = PF03501)' T
'29.2.1.2.1.10' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10' 'niben101scf13703_137840-141974' '(gnl|cdd|38554 : 192.0) no description available & (at4g25740 : 187.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ayp4|rs10_orysa : 178.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (gnl|cdd|67137 : 168.0) no description available & (reliability: 374.0) & (original description: Putative RPS10A, Description = 40S ribosomal protein S10-1, PFAM = PF03501)' T
'29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf02220_637725-641848' '(p17093|rs11_soybn : 266.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 259.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 237.0) no description available & (gnl|cdd|82687 : 127.0) no description available & (reliability: 518.0) & (original description: Putative RPS11, Description = Ribosomal protein S11, PFAM = PF00366;PF16205)' T
'29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf05588_517724-522891' '(p17093|rs11_soybn : 268.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 260.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 239.0) no description available & (gnl|cdd|82687 : 126.0) no description available & (reliability: 520.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-1, PFAM = PF00366;PF16205)' T
'29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf06761_110604-114605' '(p17093|rs11_soybn : 267.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 259.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 237.0) no description available & (gnl|cdd|82687 : 127.0) no description available & (reliability: 518.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-1, PFAM = PF00366;PF16205)' T
'29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf12405_10667-15020' '(p17093|rs11_soybn : 265.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 258.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 236.0) no description available & (gnl|cdd|82687 : 125.0) no description available & (reliability: 516.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-A, PFAM = PF16205;PF00366)' T
'29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf00472_10330-14080' '(q9xhs0|rs12_horvu : 184.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (gnl|cdd|38616 : 163.0) no description available & (at2g32060 : 162.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|85334 : 88.7) no description available & (reliability: 324.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T
'29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf01054_1319224-1322333' '(q9xhs0|rs12_horvu : 189.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 167.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38616 : 165.0) no description available & (gnl|cdd|85334 : 91.4) no description available & (reliability: 334.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T
'29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf03224_577772-580631' '(q9xhs0|rs12_horvu : 187.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 166.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38616 : 165.0) no description available & (gnl|cdd|85334 : 90.6) no description available & (reliability: 332.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T
'29.2.1.2.1.13' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13' 'niben101scf00527_168049-173105' '(p62302|rs13_soybn : 267.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (at4g00100 : 257.0) Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (gnl|cdd|35621 : 246.0) no description available & (gnl|cdd|82677 : 176.0) no description available & (reliability: 514.0) & (original description: Putative RPS13B, Description = 40S ribosomal protein S13-2, PFAM = PF00312;PF08069)' T
'29.2.1.2.1.13' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13' 'niben101scf00603_833004-836516' '(p62302|rs13_soybn : 217.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (at3g60770 : 213.0) Ribosomal protein S13/S15; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: ribosomal protein S13A (TAIR:AT4G00100.1); Has 1099 Blast hits to 1099 proteins in 415 species: Archae - 259; Bacteria - 0; Metazoa - 342; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (gnl|cdd|35621 : 202.0) no description available & (gnl|cdd|82677 : 146.0) no description available & (reliability: 426.0) & (original description: Putative rps13, Description = Ribosomal protein S13, PFAM = PF08069;PF00312)' T
'29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'nbv0.5scaffold3270_160086-164597' '(gnl|cdd|35628 : 233.0) no description available & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (p19950|rs141_maize : 212.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (gnl|cdd|83108 : 187.0) no description available & (reliability: 426.0) & (original description: Putative rps14, Description = 40S ribosomal protein S14, PFAM = PF00411)' T
'29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf02232_39859-44113' '(gnl|cdd|35628 : 228.0) no description available & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (p19950|rs141_maize : 212.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative rps11, Description = 40S ribosomal protein S14, PFAM = PF00411)' T
'29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf09089_199658-204188' '(gnl|cdd|35628 : 228.0) no description available & (p19950|rs141_maize : 214.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative RPS14A, Description = 40S ribosomal protein S14-1, PFAM = PF00411)' T
'29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf19719_34325-38939' '(gnl|cdd|35628 : 228.0) no description available & (p19950|rs141_maize : 215.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (at3g11510 : 213.0) Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT2G36160.1); Has 8773 Blast hits to 8773 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2175 (source: NCBI BLink). & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative RPS14A, Description = 40S ribosomal protein S14-1, PFAM = PF00411)' T
'29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'nbv0.5scaffold4632_68639-71067' '(gnl|cdd|36116 : 202.0) no description available & (p31674|rs15_orysa : 197.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 194.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 127.0) no description available & (reliability: 388.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T
'29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf02830_230705-234869' '(gnl|cdd|36116 : 261.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 238.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 157.0) no description available & (reliability: 476.0) & (original description: Putative RPS15B, Description = 40S ribosomal protein S15-2, PFAM = PF00203)' T
'29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf03652_359988-366335' '(gnl|cdd|36116 : 258.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 234.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 156.0) no description available & (reliability: 468.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T
'29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf03824_222604-227346' '(gnl|cdd|36116 : 257.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 233.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 156.0) no description available & (reliability: 466.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T
'29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf10431_106382-108840' '(gnl|cdd|36116 : 240.0) no description available & (p31674|rs15_orysa : 232.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 224.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 151.0) no description available & (reliability: 448.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T
'29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf00110_115295-117735' '(p46293|rs16_goshi : 246.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (at2g09990 : 245.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|36964 : 238.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 490.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T
'29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf03534_121067-123507' '(p46293|rs16_goshi : 248.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (at2g09990 : 246.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|36964 : 239.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 492.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T
'29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf05845_353843-356292' '(at2g09990 : 248.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p46293|rs16_goshi : 247.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|36964 : 242.0) no description available & (gnl|cdd|64255 : 139.0) no description available & (reliability: 496.0) & (original description: Putative RPS16A, Description = 40S ribosomal protein S16-1, PFAM = PF00380)' T
'29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf05955_70275-72715' '(at2g09990 : 246.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p46293|rs16_goshi : 246.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|36964 : 237.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 492.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'nbv0.3scaffold1316_82071-84216' '(at1g49400 : 132.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 112.0) no description available & (gnl|cdd|81659 : 92.5) no description available & (reliability: 264.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf00912_399270-401704' '(at5g04800 : 197.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|35408 : 189.0) no description available & (gnl|cdd|85056 : 166.0) no description available & (reliability: 394.0) & (original description: Putative RPS17, Description = 40S ribosomal protein S17, PFAM = PF00833)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf01440_190501-192947' '(at5g04800 : 189.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|35408 : 185.0) no description available & (gnl|cdd|85056 : 167.0) no description available & (reliability: 378.0) & (original description: Putative rps1701, Description = 40S ribosomal protein S17-A, PFAM = PF00833)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf01834_515912-518343' '(at5g04800 : 92.4) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative rps17, Description = 40S ribosomal protein S17, PFAM = PF00833)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf02437_233820-237364' '(at1g49400 : 132.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 111.0) no description available & (gnl|cdd|81659 : 93.7) no description available & (reliability: 264.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T
'29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf07939_136454-138868' '(at1g49400 : 130.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 110.0) no description available & (gnl|cdd|81659 : 93.3) no description available & (reliability: 260.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben044scf00023066ctg001_1661-12385' '(at4g09800 : 188.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (p49202|rs18_chlre : 152.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|38521 : 138.0) no description available & (gnl|cdd|81278 : 105.0) no description available & (reliability: 376.0) & (original description: Putative rpS18, Description = Ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf01339_270793-274344' '(at4g09800 : 240.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 203.0) no description available & (p49202|rs18_chlre : 198.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 164.0) no description available & (reliability: 480.0) & (original description: Putative RPS18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf01349_420626-425007' '(at4g09800 : 241.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 203.0) no description available & (p49202|rs18_chlre : 198.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 165.0) no description available & (reliability: 482.0) & (original description: Putative RPS18A, Description = 40S ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf03203_723010-726540' '(at4g09800 : 240.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 204.0) no description available & (p49202|rs18_chlre : 196.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 166.0) no description available & (reliability: 480.0) & (original description: Putative RpS18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf03848_932204-936957' '(at4g09800 : 256.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 215.0) no description available & (p49202|rs18_chlre : 208.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 174.0) no description available & (reliability: 512.0) & (original description: Putative RPS18A, Description = 40S ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf09436_496618-500314' '(at4g09800 : 190.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (p49202|rs18_chlre : 155.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|38521 : 141.0) no description available & (gnl|cdd|81278 : 108.0) no description available & (reliability: 380.0) & (original description: Putative Rps18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf00914_316375-318656' '(p27527|rt19_pethy : 145.0) Mitochondrial ribosomal protein S19 - Petunia hybrida (Petunia) & (at5g47320 : 109.0) Nuclear encoded mitochondrial ribosome subunit.; ribosomal protein S19 (RPS19); CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84606 : 93.8) no description available & (gnl|cdd|36117 : 93.2) no description available & (reliability: 218.0) & (original description: Putative RPS19, Description = Ribosomal protein S19, mitochondrial, PFAM = PF00203)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf01346_176708-180670' '(gnl|cdd|38621 : 218.0) no description available & (gnl|cdd|85236 : 213.0) no description available & (at5g61170 : 210.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 193.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 420.0) & (original description: Putative RPS19B, Description = 40S ribosomal protein S19-2, PFAM = PF01090)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf02646_203523-207961' '(gnl|cdd|38621 : 219.0) no description available & (gnl|cdd|85236 : 214.0) no description available & (at5g61170 : 210.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 192.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 420.0) & (original description: Putative RPS19, Description = 40S ribosomal protein S19, PFAM = PF01090)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf07325_163868-168139' '(gnl|cdd|38621 : 219.0) no description available & (gnl|cdd|85236 : 212.0) no description available & (at5g61170 : 207.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 193.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 414.0) & (original description: Putative RPS19A, Description = 40S ribosomal protein S19-1, PFAM = PF01090)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf08721_147121-151053' '(gnl|cdd|38621 : 220.0) no description available & (gnl|cdd|85236 : 213.0) no description available & (at5g61170 : 209.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 196.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative RPS19A, Description = 40S ribosomal protein S19-1, PFAM = PF01090)' T
'29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf11705_27138-30155' '(p27527|rt19_pethy : 147.0) Mitochondrial ribosomal protein S19 - Petunia hybrida (Petunia) & (at5g47320 : 102.0) Nuclear encoded mitochondrial ribosome subunit.; ribosomal protein S19 (RPS19); CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84606 : 96.1) no description available & (gnl|cdd|36117 : 91.3) no description available & (reliability: 204.0) & (original description: Putative RPS19, Description = Ribosomal protein S19, mitochondrial, PFAM = PF00203)' T
'29.2.1.2.1.20' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20' 'niben101scf04300_10602-16019' '(at3g47370 : 202.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT5G62300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p35686|rs20_orysa : 182.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (gnl|cdd|36118 : 154.0) no description available & (gnl|cdd|64215 : 124.0) no description available & (reliability: 404.0) & (original description: Putative RPS20, Description = 40S ribosomal protein S20, PFAM = PF00338)' T
'29.2.1.2.1.20' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20' 'niben101scf10431_120555-124450' '(at5g62300 : 204.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT3G45030.1); Has 7487 Blast hits to 7487 proteins in 2603 species: Archae - 270; Bacteria - 4745; Metazoa - 380; Fungi - 144; Plants - 182; Viruses - 0; Other Eukaryotes - 1766 (source: NCBI BLink). & (p35686|rs20_orysa : 181.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (gnl|cdd|36118 : 155.0) no description available & (gnl|cdd|64215 : 123.0) no description available & (reliability: 408.0) & (original description: Putative RPS20B, Description = 40S ribosomal protein S20-2, PFAM = PF00338)' T
'29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'nbv0.3scaffold1784_4984-7229' '(at5g27700 : 130.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 129.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 124.0) no description available & (gnl|cdd|85335 : 119.0) no description available & (reliability: 260.0) & (original description: Putative RPS21B, Description = 40S ribosomal protein S21-1, PFAM = PF01249)' T
'29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf02626_42739-46133' '(at5g27700 : 120.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 117.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 117.0) no description available & (gnl|cdd|85335 : 110.0) no description available & (reliability: 240.0) & (original description: Putative rps21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T
'29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf04328_178681-188066' '(at3g27160 : 100.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative GHS1, Description = GLUCOSE HYPERSENSITIVE 1 family protein, PFAM = PF01165)' T
'29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf04455_539946-544281' '(at5g27700 : 131.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 130.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 125.0) no description available & (gnl|cdd|85335 : 119.0) no description available & (reliability: 262.0) & (original description: Putative RPS21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T
'29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf10524_243252-246354' '(at5g27700 : 139.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 135.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 132.0) no description available & (gnl|cdd|85335 : 128.0) no description available & (reliability: 278.0) & (original description: Putative RPS21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T
'29.2.1.2.1.22' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S22' '' ''
'29.2.1.2.1.23' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S23' 'niben101scf00631_174113-177565' '(p46297|rs23_fraan : 250.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (at5g02960 : 243.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (gnl|cdd|36960 : 234.0) no description available & (gnl|cdd|48340 : 193.0) no description available & (reliability: 486.0) & (original description: Putative RPS23A, Description = 40S ribosomal protein S23-1, PFAM = PF00164)' T
'29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'nbv0.5scaffold4581_116738-120683' '(at5g28060 : 188.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 151.0) no description available & (gnl|cdd|32187 : 96.1) no description available & (reliability: 376.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T
'29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf06447_26588-31020' '(at5g28060 : 184.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 150.0) no description available & (gnl|cdd|32187 : 98.0) no description available & (reliability: 368.0) & (original description: Putative rps2402, Description = 40S ribosomal protein S24-B, PFAM = PF01282)' T
'29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf06819_267522-271910' '(at5g28060 : 188.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 153.0) no description available & (gnl|cdd|32187 : 98.4) no description available & (reliability: 376.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T
'29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf11383_81133-85375' '(at5g28060 : 179.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 138.0) no description available & (gnl|cdd|32187 : 90.3) no description available & (reliability: 358.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T
'29.2.1.2.1.25' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S25' 'niben101scf00088_150233-153208' '(gnl|cdd|86293 : 124.0) no description available & (at4g34555 : 117.0) Ribosomal protein S25 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36978 : 117.0) no description available & (reliability: 234.0) & (original description: Putative RPS25, Description = 40S ribosomal protein S25, PFAM = PF03297)' T
'29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'nbv0.5scaffold1674_411135-415263' '(gnl|cdd|85360 : 150.0) no description available & (gnl|cdd|36979 : 136.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 98.6) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RpS26, Description = 40S ribosomal protein S26, PFAM = PF01283)' T
'29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf02316_38327-42248' '(gnl|cdd|85360 : 153.0) no description available & (gnl|cdd|36979 : 138.0) no description available & (at2g40590 : 107.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 100.0) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 214.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T
'29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf03842_130869-135220' '(gnl|cdd|85360 : 151.0) no description available & (gnl|cdd|36979 : 139.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 100.0) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T
'29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf04181_80448-84471' '(gnl|cdd|85360 : 150.0) no description available & (gnl|cdd|36979 : 136.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 98.6) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben044scf00020875ctg009_23439-26433' '(at3g61110 : 158.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 138.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 133.0) no description available & (gnl|cdd|65462 : 85.4) no description available & (reliability: 316.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf00687_333078-335545' '(at2g47110 : 249.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 225.0) no description available & (p69326|ubiq_wheat : 149.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 147.0) no description available & (reliability: 476.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01236_489211-491678' '(at3g62250 : 248.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|35228 : 224.0) no description available & (p69326|ubiq_wheat : 148.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 145.0) no description available & (reliability: 476.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01808_84115-86635' '(at3g61110 : 160.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 140.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 135.0) no description available & (gnl|cdd|65462 : 84.6) no description available & (reliability: 320.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01818_779840-782847' '(at3g61110 : 161.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 141.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 134.0) no description available & (gnl|cdd|65462 : 85.0) no description available & (reliability: 322.0) & (original description: Putative RPS27, Description = 40S ribosomal protein S27, PFAM = PF01667)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01956_78496-84649' '(at2g47110 : 232.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 209.0) no description available & (p69326|ubiq_wheat : 138.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 135.0) no description available & (reliability: 440.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 260.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf03777_11285-13855' '(gnl|cdd|36990 : 121.0) no description available & (at3g61110 : 105.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q96564|rs27_horvu : 99.0) 40S ribosomal protein S27 (Manganese efficiency-related protein 1) - Hordeum vulgare (Barley) & (gnl|cdd|65462 : 80.0) no description available & (reliability: 210.0) & (original description: Putative rps27, Description = 40S ribosomal protein S27, PFAM = PF01667)' T
'29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf09097_26001-28518' '(gnl|cdd|36990 : 137.0) no description available & (at3g61110 : 134.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q96564|rs27_horvu : 125.0) 40S ribosomal protein S27 (Manganese efficiency-related protein 1) - Hordeum vulgare (Barley) & (gnl|cdd|65462 : 84.2) no description available & (reliability: 268.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T
'29.2.1.2.1.28' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S28' 'niben101scf01669_473453-475881' '(p46302|rs28_maize : 103.0) 40S ribosomal protein S28 - Zea mays (Maize) & (at5g64140 : 102.0) Encodes a putative ribosomal protein S28.; ribosomal protein S28 (RPS28); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G03850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85301 : 99.7) no description available & (gnl|cdd|38712 : 91.9) no description available & (reliability: 204.0) & (original description: Putative RPS28, Description = 40S ribosomal protein S28, PFAM = PF01200)' T
'29.2.1.2.1.29' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S29' 'niben101scf01339_651265-654699' '(at4g33865 : 93.2) Ribosomal protein S14p/S29e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: Ribosomal protein S14p/S29e family protein (TAIR:AT3G43980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative RPS29, Description = 40S ribosomal protein S29, PFAM = PF00253)' T
'29.2.1.2.1.30' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S30' '' ''
'29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'nbv0.3scaffold3056_47870-51938' '(o80377|rssa_dauca : 409.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 390.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 286.0) no description available & (gnl|cdd|84690 : 247.0) no description available & (reliability: 780.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T
'29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben044scf00016250ctg022_21-4372' '(o80377|rssa_dauca : 408.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 388.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 289.0) no description available & (gnl|cdd|84690 : 244.0) no description available & (reliability: 776.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T
'29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben101scf00338_854351-857955' '(o80377|rssa_dauca : 390.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 384.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 287.0) no description available & (gnl|cdd|84690 : 243.0) no description available & (reliability: 768.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T
'29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben101scf02003_103551-127114' '(o80377|rssa_dauca : 408.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at3g04770 : 390.0) 40s ribosomal protein SA B (RPSAb); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA (TAIR:AT1G72370.2); Has 3720 Blast hits to 3717 proteins in 1345 species: Archae - 262; Bacteria - 1764; Metazoa - 685; Fungi - 333; Plants - 227; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink). & (gnl|cdd|36048 : 285.0) no description available & (gnl|cdd|84690 : 246.0) no description available & (reliability: 780.0) & (original description: Putative RPSA, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T
'29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'nbv0.3scaffold19349_30914-33514' '(p33444|rs3a_catro : 205.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 201.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 154.0) no description available & (gnl|cdd|85186 : 130.0) no description available & (reliability: 402.0) & (original description: Putative rps1, Description = 40S ribosomal protein S1, PFAM = PF01015)' T
'29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf01182_47131-51019' '(p33444|rs3a_catro : 401.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 385.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 321.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 770.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T
'29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf01249_651081-655460' '(p33444|rs3a_catro : 387.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 368.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 321.0) no description available & (gnl|cdd|85186 : 312.0) no description available & (reliability: 736.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T
'29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf05084_1388-6680' '(p33444|rs3a_catro : 400.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 386.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 320.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 772.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T
'29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf07165_243880-249187' '(p33444|rs3a_catro : 412.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 396.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 320.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 792.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T
'29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf00206_174224-179661' '(at2g19720 : 210.0) ribosomal protein S15A B (rps15ab); CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A E (TAIR:AT4G29430.1); Has 3453 Blast hits to 3453 proteins in 1209 species: Archae - 277; Bacteria - 1569; Metazoa - 426; Fungi - 219; Plants - 302; Viruses - 0; Other Eukaryotes - 660 (source: NCBI BLink). & (gnl|cdd|36965 : 168.0) no description available & (q9at34|rs15a_dauca : 137.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (gnl|cdd|81268 : 132.0) no description available & (reliability: 420.0) & (original description: Putative RPS15AE, Description = 40S ribosomal protein S15a-5, PFAM = PF00410)' T
'29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf02452_43672-46784' '(at5g59850 : 254.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00332|rs15a_brana : 251.0) 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) & (gnl|cdd|36965 : 227.0) no description available & (gnl|cdd|81268 : 167.0) no description available & (reliability: 508.0) & (original description: Putative RPS15AA, Description = 40S ribosomal protein S15a-1, PFAM = PF00410)' T
'29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf05926_148919-223771' '(at5g59850 : 176.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00332|rs15a_brana : 176.0) 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) & (gnl|cdd|36965 : 160.0) no description available & (gnl|cdd|81268 : 122.0) no description available & (reliability: 352.0) & (original description: Putative rps22, Description = 40S ribosomal protein S15a, PFAM = PF00410)' T
'29.2.1.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit' '' ''
'29.2.1.2.2.1' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L1' '' ''
'29.2.1.2.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L2' 'niben101scf06770_32013-34957' '(atmg00560 : 112.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 112.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 220.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = PF00181)' T
'29.2.1.2.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L2' 'niben101scf10732_205961-208398' '(atmg00560 : 130.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 91.3) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = )' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.3scaffold257_99708-104321' '(p35684|rl3_orysj : 660.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 630.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 566.0) no description available & (gnl|cdd|81334 : 309.0) no description available & (reliability: 1260.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.3scaffold34618_714-4953' '(p35684|rl3_orysj : 652.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 644.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 573.0) no description available & (gnl|cdd|81334 : 314.0) no description available & (reliability: 1288.0) & (original description: Putative ARP2, Description = 60S ribosomal protein L3-2, PFAM = PF00297)' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.5scaffold378_272591-277169' '(p35684|rl3_orysj : 660.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g43170 : 629.0) Encodes a cytoplasmic ribosomal protein.; ribosomal protein 1 (RP1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: R-protein L3 B (TAIR:AT1G61580.1). & (gnl|cdd|35965 : 565.0) no description available & (gnl|cdd|81334 : 311.0) no description available & (reliability: 1258.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf00117_61127-66733' '(p35684|rl3_orysj : 654.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 648.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 575.0) no description available & (gnl|cdd|81334 : 313.0) no description available & (reliability: 1296.0) & (original description: Putative ARP2, Description = 60S ribosomal protein L3-2, PFAM = PF00297)' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf02802_5724-10487' '(p35684|rl3_orysj : 643.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 612.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 554.0) no description available & (gnl|cdd|81334 : 297.0) no description available & (reliability: 1224.0) & (original description: Putative rpl3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T
'29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf14636_339014-343739' '(p35684|rl3_orysj : 664.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 634.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 570.0) no description available & (gnl|cdd|81334 : 307.0) no description available & (reliability: 1268.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'nbv0.3scaffold66042_1-4809' '(q6unt2|rl5_cucsa : 395.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 389.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 332.0) no description available & (gnl|cdd|82684 : 148.0) no description available & (reliability: 778.0) & (original description: Putative ATL5, Description = 60S ribosomal protein L5-1, PFAM = PF17144;PF14204)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben044scf00009301ctg025_635-5270' '(q6unt2|rl5_cucsa : 350.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 345.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 262.0) no description available & (gnl|cdd|82684 : 116.0) no description available & (reliability: 690.0) & (original description: Putative rpl5, Description = Small nucleolar RNA, C/D box 21, PFAM = PF17144;PF14204)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf01148_195423-200038' '(q6unt2|rl5_cucsa : 414.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 408.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 335.0) no description available & (gnl|cdd|82684 : 147.0) no description available & (reliability: 816.0) & (original description: Putative RPL5A, Description = 60S ribosomal protein L5-1, PFAM = PF17144;PF14204)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf02098_342823-347732' '(q6unt2|rl5_cucsa : 399.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 395.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 334.0) no description available & (gnl|cdd|82684 : 149.0) no description available & (reliability: 790.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, PFAM = PF14204;PF17144)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf02309_397262-399907' '(p51409|rm05_soltu : 328.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 303.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 606.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf04387_223670-228498' '(q6unt2|rl5_cucsa : 426.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 411.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 332.0) no description available & (gnl|cdd|82684 : 148.0) no description available & (reliability: 822.0) & (original description: Putative rpl5a, Description = Ribosomal protein L5a, PFAM = PF14204;PF17144)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf04436_1367116-1372319' '(q6unt2|rl5_cucsa : 414.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 404.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 333.0) no description available & (gnl|cdd|82684 : 146.0) no description available & (reliability: 808.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, PFAM = PF14204;PF17144)' T
'29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf25294_1-1245' '(p51409|rm05_soltu : 305.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 276.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 552.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00011769ctg008_249-2554' '(at2g18400 : 159.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 140.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 136.0) no description available & (gnl|cdd|81626 : 108.0) no description available & (reliability: 318.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00015711ctg001_6311-8931' '(p34091|rl6_mescr : 186.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g18540 : 181.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74050.1); Has 758 Blast hits to 758 proteins in 286 species: Archae - 33; Bacteria - 0; Metazoa - 332; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative rpl6, Description = 60S ribosomal protein L6, PFAM = PF03868)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00017572ctg005_9889-13305' '(p34091|rl6_mescr : 285.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 269.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 99.0) no description available & (reliability: 538.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf01958_366935-370291' '(p34091|rl6_mescr : 293.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 277.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 100.0) no description available & (reliability: 554.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf02915_246786-249091' '(at2g18400 : 154.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 138.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 127.0) no description available & (gnl|cdd|81626 : 98.6) no description available & (reliability: 308.0) & (original description: Putative rpl6, Description = Ribosomal protein L6, PFAM = PF00347)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf03209_85178-88705' '(p34091|rl6_mescr : 283.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74060 : 274.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74050.1); Has 744 Blast hits to 744 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 333; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 99.0) no description available & (reliability: 548.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF03868;PF01159)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf03977_120357-123451' '(p34091|rl6_mescr : 278.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 265.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 96.6) no description available & (reliability: 530.0) & (original description: Putative rpl6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf05969_223955-226260' '(at2g18400 : 160.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 141.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 137.0) no description available & (gnl|cdd|81626 : 108.0) no description available & (reliability: 320.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T
'29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf06142_6678-9889' '(at2g18400 : 164.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 142.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 138.0) no description available & (gnl|cdd|81626 : 107.0) no description available & (reliability: 328.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'nbv0.3scaffold26939_634-4388' '(at3g13580 : 385.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 269.0) no description available & (gnl|cdd|29435 : 235.0) no description available & (reliability: 770.0) & (original description: Putative rpl7, Description = Ribosomal protein L7, PFAM = PF08079;PF00327)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'nbv0.5scaffold7193_70419-75249' '(at2g44120 : 364.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 274.0) no description available & (gnl|cdd|29435 : 240.0) no description available & (reliability: 728.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben044scf00012928ctg002_4028-8666' '(at2g44120 : 363.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 274.0) no description available & (gnl|cdd|29435 : 243.0) no description available & (reliability: 726.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf00715_119166-124506' '(at2g01250 : 235.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|29435 : 196.0) no description available & (gnl|cdd|38394 : 195.0) no description available & (reliability: 470.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf01585_161167-165638' '(at3g13580 : 388.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 272.0) no description available & (gnl|cdd|29435 : 238.0) no description available & (reliability: 776.0) & (original description: Putative RPL7, Description = 60S ribosomal protein L7, PFAM = PF08079;PF00327)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf03065_36668-40453' '(at2g44120 : 337.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 247.0) no description available & (gnl|cdd|29435 : 236.0) no description available & (reliability: 674.0) & (original description: Putative rpl8, Description = Ribosomal protein L8, PFAM = PF08079;PF08079;PF00327)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf06976_234740-239851' '(at1g80750 : 237.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1152 Blast hits to 1152 proteins in 343 species: Archae - 126; Bacteria - 0; Metazoa - 424; Fungi - 213; Plants - 191; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|29435 : 190.0) no description available & (gnl|cdd|38394 : 188.0) no description available & (reliability: 474.0) & (original description: Putative RPL7A, Description = 60S ribosomal protein L7-1, PFAM = PF00327;PF08079)' T
'29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf10798_50137-54018' '(at3g13580 : 388.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 269.0) no description available & (gnl|cdd|29435 : 235.0) no description available & (reliability: 776.0) & (original description: Putative RPL7, Description = 60S ribosomal protein L7, PFAM = PF00327;PF08079)' T
'29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben044scf00015607ctg007_3715-9630' '(p25998|rl8_tobac : 429.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 424.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 376.0) no description available & (gnl|cdd|83109 : 260.0) no description available & (reliability: 848.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF03947;PF00181)' T
'29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf00858_496640-500514' '(p25998|rl8_tobac : 438.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 431.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 377.0) no description available & (gnl|cdd|83109 : 259.0) no description available & (reliability: 862.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF00181;PF03947)' T
'29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf02262_131713-135538' '(p25998|rl8_tobac : 432.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 428.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 375.0) no description available & (gnl|cdd|83109 : 260.0) no description available & (reliability: 856.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF00181;PF03947)' T
'29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf06332_350478-354324' '(p25998|rl8_tobac : 429.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 425.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 376.0) no description available & (gnl|cdd|83109 : 258.0) no description available & (reliability: 850.0) & (original description: Putative RPL8B, Description = 60S ribosomal protein L8-2, PFAM = PF03947;PF00181)' T
'29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf00078_192122-196035' '(at1g33140 : 316.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p30707|rl9_pea : 308.0) 60S ribosomal protein L9 (Gibberellin-regulated protein GA) - Pisum sativum (Garden pea) & (gnl|cdd|38465 : 203.0) no description available & (gnl|cdd|81628 : 132.0) no description available & (reliability: 632.0) & (original description: Putative RPL9B, Description = 60S ribosomal protein L9-1, PFAM = PF00347;PF00347)' T
'29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf00168_883718-887755' '(at1g33140 : 315.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p49210|rl9_orysa : 304.0) 60S ribosomal protein L9 - Oryza sativa (Rice) & (gnl|cdd|38465 : 202.0) no description available & (gnl|cdd|81628 : 132.0) no description available & (reliability: 630.0) & (original description: Putative RPL9D, Description = 60S ribosomal protein L9-2, PFAM = PF00347;PF00347)' T
'29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf03321_447770-451765' '(at1g33140 : 315.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p30707|rl9_pea : 308.0) 60S ribosomal protein L9 (Gibberellin-regulated protein GA) - Pisum sativum (Garden pea) & (gnl|cdd|38465 : 200.0) no description available & (gnl|cdd|81628 : 133.0) no description available & (reliability: 630.0) & (original description: Putative RPL9B, Description = 60S ribosomal protein L9-1, PFAM = PF00347;PF00347)' T
'29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben044scf00020850ctg008_14695-20126' '(p93847|rl10_solme : 265.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 256.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 177.0) no description available & (gnl|cdd|81322 : 91.4) no description available & (reliability: 512.0) & (original description: Putative RPL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T
'29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf02316_359599-363332' '(p93847|rl10_solme : 422.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 384.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 288.0) no description available & (gnl|cdd|81322 : 183.0) no description available & (reliability: 768.0) & (original description: Putative RPL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T
'29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf02614_65470-69806' '(p93847|rl10_solme : 421.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 384.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 288.0) no description available & (gnl|cdd|81322 : 183.0) no description available & (reliability: 768.0) & (original description: Putative SG12, Description = 60S ribosomal protein L10-2, PFAM = PF00252)' T
'29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf03983_137158-141355' '(p45635|rl101_orysa : 174.0) 60S ribosomal protein L10-1 (Putative tumor suppressor SC34) (Protein QM) - Oryza sativa (Rice) & (at1g66580 : 172.0) senescence associated gene 24 (SAG24); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1679 Blast hits to 1677 proteins in 605 species: Archae - 325; Bacteria - 13; Metazoa - 562; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 123.0) no description available & (gnl|cdd|81322 : 88.0) no description available & (reliability: 344.0) & (original description: Putative rL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T
'29.2.1.2.2.11' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11' 'niben101scf01250_119198-123490' '(at2g42740 : 319.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 319.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 305.0) no description available & (gnl|cdd|81331 : 212.0) no description available & (reliability: 638.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00281;PF00673)' T
'29.2.1.2.2.11' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11' 'niben101scf02381_840822-844526' '(at5g45775 : 320.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 317.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 306.0) no description available & (gnl|cdd|81331 : 213.0) no description available & (reliability: 640.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00673;PF00281)' T
'29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf00988_97554-100051' '(at5g60670 : 262.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 243.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 129.0) no description available & (reliability: 524.0) & (original description: Putative RPL12, Description = 60S ribosomal protein L12, PFAM = PF03946;PF00298)' T
'29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf01911_238612-241109' '(at5g60670 : 262.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 241.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 130.0) no description available & (reliability: 524.0) & (original description: Putative rpL12e, Description = Ribosomal protein L12e, PFAM = PF03946;PF00298)' T
'29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf05051_315821-318318' '(at5g60670 : 263.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 243.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 131.0) no description available & (reliability: 526.0) & (original description: Putative RPL12, Description = 60S ribosomal protein L12, PFAM = PF00298;PF03946)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'nbv0.5scaffold1842_215002-218070' '(at3g49010 : 284.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 281.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 271.0) no description available & (gnl|cdd|65117 : 251.0) no description available & (reliability: 568.0) & (original description: Putative RPL13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf02249_274664-631621' '(at3g49010 : 147.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 136.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 135.0) no description available & (gnl|cdd|65117 : 114.0) no description available & (reliability: 294.0) & (original description: Putative bbc1, Description = 60S ribosomal protein L13, PFAM = PF01294)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf03293_227884-230316' '(at3g49010 : 138.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 137.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 119.0) no description available & (gnl|cdd|65117 : 117.0) no description available & (reliability: 276.0) & (original description: Putative rl13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf05018_11788-15018' '(at3g49010 : 298.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 295.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 273.0) no description available & (gnl|cdd|65117 : 256.0) no description available & (reliability: 596.0) & (original description: Putative rpl13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf08478_327964-333402' '(at3g01790 : 270.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins in 2675 species: Archae - 7; Bacteria - 5222; Metazoa - 123; Fungi - 136; Plants - 125; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink). & (gnl|cdd|82862 : 157.0) no description available & (gnl|cdd|38413 : 154.0) no description available & (p12629|rk13_spiol : 85.5) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (reliability: 540.0) & (original description: Putative rplM, Description = 50S ribosomal protein L13, PFAM = PF00572)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf09242_1-3384' '(at3g49010 : 305.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 295.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 267.0) no description available & (gnl|cdd|65117 : 256.0) no description available & (reliability: 610.0) & (original description: Putative RPL13B, Description = 60S ribosomal protein L13-1, PFAM = PF01294)' T
'29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf32453_20885-24033' '(at3g49010 : 282.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 281.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 270.0) no description available & (gnl|cdd|65117 : 251.0) no description available & (reliability: 564.0) & (original description: Putative RPL13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T
'29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben044scf00009111ctg015_696-5603' '(at4g27090 : 175.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 169.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 154.0) no description available & (gnl|cdd|65700 : 85.0) no description available & (reliability: 350.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T
'29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf02243_73319-77160' '(at2g20450 : 174.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species: Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p55844|rl14_pea : 173.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 150.0) no description available & (gnl|cdd|65700 : 84.6) no description available & (reliability: 348.0) & (original description: Putative rpl14, Description = 60S ribosomal protein L14, PFAM = PF01929)' T
'29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf03229_122049-126395' '(at4g27090 : 177.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 169.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 155.0) no description available & (gnl|cdd|65700 : 83.4) no description available & (reliability: 354.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T
'29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf05997_22933-26658' '(p55844|rl14_pea : 172.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (at2g20450 : 171.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species: Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38631 : 148.0) no description available & (gnl|cdd|65700 : 83.4) no description available & (reliability: 342.0) & (original description: Putative rpl14, Description = 60S ribosomal protein L14, PFAM = PF01929)' T
'29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf09792_177620-182637' '(at4g27090 : 176.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 170.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 154.0) no description available & (gnl|cdd|65700 : 85.4) no description available & (reliability: 352.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T
'29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf00781_373451-377311' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 290.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 264.0) no description available & (reliability: 580.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T
'29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02073_438153-442581' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 286.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 572.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T
'29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02182_1849849-1853956' '(o82528|rl15_pethy : 305.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 288.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 266.0) no description available & (reliability: 576.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T
'29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02459_965810-971051' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 285.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 570.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T
'29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf21171_15457-20125' '(o82528|rl15_pethy : 305.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 295.0) no description available & (at4g16720 : 287.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 574.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T
'29.2.1.2.2.16' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L16' 'niben101scf01250_119198-123490' '(at2g42740 : 319.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 319.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 305.0) no description available & (gnl|cdd|81331 : 212.0) no description available & (reliability: 638.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00281;PF00673)' T
'29.2.1.2.2.16' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L16' 'niben101scf02381_840822-844526' '(at5g45775 : 320.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 317.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 306.0) no description available & (gnl|cdd|81331 : 213.0) no description available & (reliability: 640.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00673;PF00281)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben044scf00007070ctg012_8435-13053' '(at1g27400 : 280.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 267.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 212.0) no description available & (gnl|cdd|81333 : 136.0) no description available & (reliability: 560.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf05583_141341-147481' '(at1g27400 : 272.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 258.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 203.0) no description available & (gnl|cdd|81333 : 131.0) no description available & (reliability: 544.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf05750_415804-422076' '(at1g27400 : 248.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (o48557|rl17_maize : 238.0) 60S ribosomal protein L17 - Zea mays (Maize) & (gnl|cdd|38563 : 204.0) no description available & (gnl|cdd|81333 : 134.0) no description available & (reliability: 496.0) & (original description: Putative RPL17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf08544_105423-109065' '(at1g27400 : 286.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 271.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 211.0) no description available & (gnl|cdd|81333 : 138.0) no description available & (reliability: 572.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf10885_20981-25629' '(at1g27400 : 259.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 243.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 207.0) no description available & (gnl|cdd|81333 : 139.0) no description available & (reliability: 518.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T
'29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf19230_212630-216793' '(at1g27400 : 236.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (o48557|rl17_maize : 223.0) 60S ribosomal protein L17 - Zea mays (Maize) & (gnl|cdd|38563 : 201.0) no description available & (gnl|cdd|81333 : 131.0) no description available & (reliability: 472.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'nbv0.3scaffold13930_19494-23091' '(at5g27850 : 270.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e (InterPro:IPR000039), Ribosomal protein L18e/L15 (InterPro:IPR021131); BEST Arabidopsis thaliana protein match is: ribosomal protein L18 (TAIR:AT3G05590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o65729|rl18_cicar : 240.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 228.0) no description available & (gnl|cdd|85054 : 205.0) no description available & (reliability: 540.0) & (original description: Putative rpl18, Description = 60S ribosomal protein L18, PFAM = PF17135)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben044scf00007750ctg012_1-4204' '(at3g05590 : 292.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 281.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 260.0) no description available & (gnl|cdd|85054 : 239.0) no description available & (reliability: 584.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben044scf00021061ctg009_320-4598' '(at3g05590 : 262.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36926 : 256.0) no description available & (o65729|rl18_cicar : 249.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|85054 : 236.0) no description available & (reliability: 524.0) & (original description: Putative RpL18, Description = 60S ribosomal protein L18, PFAM = PF17135)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf00369_1804313-1811909' '(at3g05590 : 265.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36926 : 257.0) no description available & (o65729|rl18_cicar : 251.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|85054 : 236.0) no description available & (reliability: 530.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf05298_691172-695635' '(at3g05590 : 291.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 280.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 259.0) no description available & (gnl|cdd|85054 : 238.0) no description available & (reliability: 582.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T
'29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf10737_73597-77194' '(at3g05590 : 298.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 271.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 255.0) no description available & (gnl|cdd|85054 : 234.0) no description available & (reliability: 596.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T
'29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben044scf00003339ctg008_1991-5666' '(at3g16780 : 214.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 212.0) no description available & (gnl|cdd|36909 : 205.0) no description available & (q08066|rl19_maize : 84.7) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 428.0) & (original description: Putative rpl19, Description = Ribosomal protein L19, PFAM = PF01280)' T
'29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben044scf00020925ctg011_1-3501' '(at3g16780 : 215.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 214.0) no description available & (gnl|cdd|36909 : 207.0) no description available & (q08066|rl19_maize : 86.3) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 430.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T
'29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf01623_251279-255165' '(at3g16780 : 215.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 212.0) no description available & (gnl|cdd|36909 : 205.0) no description available & (q08066|rl19_maize : 86.3) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 430.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T
'29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf03706_231834-236369' '(gnl|cdd|29599 : 214.0) no description available & (at3g16780 : 211.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|36909 : 207.0) no description available & (q08066|rl19_maize : 85.5) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T
'29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf10857_104867-107472' '(at3g16780 : 211.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 196.0) no description available & (gnl|cdd|36909 : 192.0) no description available & (reliability: 422.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T
'29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'nbv0.5scaffold5589_15575-18967' '(at1g57860 : 271.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 170.0) no description available & (gnl|cdd|64990 : 120.0) no description available & (reliability: 542.0) & (original description: Putative RPL21, Description = 60S ribosomal protein L21, PFAM = PF01157)' T
'29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf00015_178114-184250' '(at1g57860 : 270.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 174.0) no description available & (gnl|cdd|64990 : 121.0) no description available & (reliability: 540.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T
'29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf03293_163706-167038' '(at1g09690 : 270.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G09590.1); Has 1439 Blast hits to 1439 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 709; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 175.0) no description available & (gnl|cdd|64990 : 121.0) no description available & (reliability: 540.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T
'29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf13002_326374-329870' '(at1g57860 : 271.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 172.0) no description available & (gnl|cdd|64990 : 120.0) no description available & (reliability: 542.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T
'29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben044scf00007750ctg001_2053-9269' '(at3g05560 : 149.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|38644 : 145.0) no description available & (gnl|cdd|85669 : 134.0) no description available & (reliability: 298.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T
'29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf00369_1219500-1223234' '(gnl|cdd|38644 : 148.0) no description available & (at3g05560 : 146.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 138.0) no description available & (reliability: 292.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T
'29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf01115_220183-224352' '(gnl|cdd|38644 : 142.0) no description available & (at3g05560 : 141.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 125.0) no description available & (reliability: 282.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T
'29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf04300_304970-310662' '(at3g05560 : 149.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|38644 : 146.0) no description available & (gnl|cdd|85669 : 135.0) no description available & (reliability: 298.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T
'29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf05435_114632-118268' '(gnl|cdd|38644 : 148.0) no description available & (at3g05560 : 147.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 137.0) no description available & (reliability: 294.0) & (original description: Putative rpl22, Description = 60S ribosomal protein L22, PFAM = PF01776)' T
'29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'nbv0.5scaffold848_478660-554485' '(q07760|rl23_tobac : 179.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (at3g04400 : 177.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (gnl|cdd|36119 : 129.0) no description available & (gnl|cdd|82686 : 108.0) no description available & (reliability: 354.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L23, PFAM = PF00238)' T
'29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'niben101scf00849_177702-182033' '(at3g04400 : 255.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 254.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36119 : 190.0) no description available & (gnl|cdd|82686 : 163.0) no description available & (reliability: 510.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23, PFAM = PF00238)' T
'29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'niben101scf03365_396666-400164' '(at3g04400 : 256.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 253.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36119 : 189.0) no description available & (gnl|cdd|82686 : 163.0) no description available & (reliability: 512.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23, PFAM = PF00238)' T
'29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf00111_168909-174229' '(o65743|rl24_cicar : 182.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 178.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 139.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 356.0) & (original description: Putative RPL24, Description = 60S ribosomal protein L24, PFAM = PF01246)' T
'29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf02475_1061113-1065245' '(at2g44860 : 190.0) Ribosomal protein L24e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988), TRASH (InterPro:IPR011017); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1527 Blast hits to 1527 proteins in 399 species: Archae - 307; Bacteria - 5; Metazoa - 446; Fungi - 310; Plants - 198; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (gnl|cdd|36934 : 136.0) no description available & (gnl|cdd|32258 : 91.9) no description available & (reliability: 380.0) & (original description: Putative rlp24, Description = Ribosome biogenesis protein RLP24, PFAM = PF01246)' T
'29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf02502_1563589-1567474' '(o65743|rl24_cicar : 176.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 171.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 140.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 342.0) & (original description: Putative rpL24e, Description = Ribosomal protein L24e, PFAM = PF01246)' T
'29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf09564_46795-51439' '(o65743|rl24_cicar : 187.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 181.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 141.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 362.0) & (original description: Putative RPL24, Description = 60S ribosomal protein L24, PFAM = PF01246)' T
'29.2.1.2.2.25' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L25' '' ''
'29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf00853_704241-706678' '(gnl|cdd|38611 : 172.0) no description available & (at3g49910 : 153.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 136.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 106.0) no description available & (reliability: 306.0) & (original description: Putative RL26, Description = RL26, ribosomal protein 26 60S large ribosomal subunit, PFAM = PF00467;PF16906)' T
'29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf00991_538046-540483' '(gnl|cdd|38611 : 175.0) no description available & (at3g49910 : 159.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 141.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 109.0) no description available & (reliability: 318.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF00467;PF16906)' T
'29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf02282_57567-60004' '(gnl|cdd|38611 : 175.0) no description available & (at3g49910 : 160.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 143.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 107.0) no description available & (reliability: 320.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF16906;PF00467)' T
'29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf03747_466658-469095' '(gnl|cdd|38611 : 174.0) no description available & (at3g49910 : 173.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 154.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 107.0) no description available & (reliability: 346.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF00467;PF16906)' T
'29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf04627_235580-255581' '(at3g49910 : 134.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 123.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|38611 : 120.0) no description available & (gnl|cdd|80834 : 90.7) no description available & (reliability: 268.0) & (original description: Putative RL26, Description = 60S ribosomal protein L26, PFAM = PF00467;PF16906)' T
'29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'nbv0.5scaffold3282_135341-137691' '(p41101|rl27_soltu : 142.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (at4g15000 : 132.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|38628 : 125.0) no description available & (reliability: 264.0) & (original description: Putative RL17, Description = 60S ribosomal protein L27, PFAM = PF01777)' T
'29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101ctg14963_807-3211' '(p41101|rl27_soltu : 164.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (gnl|cdd|38628 : 161.0) no description available & (at4g15000 : 160.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|85670 : 109.0) no description available & (reliability: 320.0) & (original description: Putative RPL27, Description = 60S ribosomal protein L27, PFAM = PF01777)' T
'29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101scf02476_555786-558190' '(at4g15000 : 174.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q05462|rl27_pea : 171.0) 60S ribosomal protein L27 - Pisum sativum (Garden pea) & (gnl|cdd|38628 : 157.0) no description available & (gnl|cdd|85670 : 104.0) no description available & (reliability: 348.0) & (original description: Putative RPL27B, Description = 60S ribosomal protein L27-2, PFAM = PF01777)' T
'29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101scf03015_621556-635179' '(p41101|rl27_soltu : 158.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (at4g15000 : 147.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|38628 : 136.0) no description available & (reliability: 294.0) & (original description: Putative rpl27, Description = 60S ribosomal protein L27, PFAM = PF01777)' T
'29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf00206_78125-81905' '(at4g29410 : 176.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38622 : 116.0) no description available & (gnl|cdd|85671 : 113.0) no description available & (reliability: 352.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T
'29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf02477_81679-85953' '(at4g29410 : 180.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38622 : 116.0) no description available & (gnl|cdd|85671 : 114.0) no description available & (reliability: 360.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T
'29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf05923_307164-327085' '(at2g19730 : 144.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT4G29410.2); Has 531 Blast hits to 531 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|85671 : 93.2) no description available & (gnl|cdd|38622 : 91.6) no description available & (reliability: 288.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T
'29.2.1.2.2.29' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L29' '' ''
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'nbv0.3scaffold57229_616-3320' '(at1g22110 : 82.8) structural constituent of ribosome; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G77932.1); Has 4674 Blast hits to 1855 proteins in 271 species: Archae - 11; Bacteria - 643; Metazoa - 1218; Fungi - 438; Plants - 374; Viruses - 105; Other Eukaryotes - 1885 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = , PFAM = PF11250)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben044scf00046629ctg003_284-3748' '(o49884|rl30_luplu : 196.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g77940 : 191.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G36240.1); Has 1074 Blast hits to 1073 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|38199 : 157.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 382.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf00833_83857-87114' '(o49884|rl30_luplu : 197.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g77940 : 193.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G36240.1); Has 1074 Blast hits to 1073 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|38199 : 159.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 386.0) & (original description: Putative rpl30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf01383_144354-148547' '(o49884|rl30_luplu : 206.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 194.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 168.0) no description available & (gnl|cdd|32095 : 130.0) no description available & (reliability: 388.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf02636_10054-12758' '(at1g22110 : 82.4) structural constituent of ribosome; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G77932.1); Has 4674 Blast hits to 1855 proteins in 271 species: Archae - 11; Bacteria - 643; Metazoa - 1218; Fungi - 438; Plants - 374; Viruses - 105; Other Eukaryotes - 1885 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = DUF3049 family protein, PFAM = PF11250)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf04558_138733-143753' '(o49884|rl30_luplu : 209.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 196.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 169.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 392.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T
'29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf05588_1219471-1223553' '(o49884|rl30_luplu : 210.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 198.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 168.0) no description available & (gnl|cdd|32095 : 131.0) no description available & (reliability: 396.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T
'29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben044scf00012901ctg009_30771-34339' '(q9mav7|rl31_pangi : 151.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (at2g19740 : 148.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|85299 : 123.0) no description available & (gnl|cdd|36111 : 117.0) no description available & (reliability: 296.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T
'29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben101scf00422_118790-122484' '(q9mav7|rl31_pangi : 152.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (at2g19740 : 151.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|85299 : 122.0) no description available & (gnl|cdd|36111 : 115.0) no description available & (reliability: 302.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T
'29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben101scf03307_962359-965613' '(at2g19740 : 151.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9mav7|rl31_pangi : 150.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (gnl|cdd|85299 : 123.0) no description available & (gnl|cdd|36111 : 116.0) no description available & (reliability: 302.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T
'29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben044scf00004240ctg000_1-5398' '(at4g18100 : 199.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 173.0) no description available & (gnl|cdd|85596 : 133.0) no description available & (reliability: 398.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T
'29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01061_1505-4970' '(at4g18100 : 211.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 174.0) no description available & (gnl|cdd|85596 : 128.0) no description available & (reliability: 422.0) & (original description: Putative rp49, Description = Ribosomal protein 49, PFAM = PF01655)' T
'29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01281_1153388-1162529' '(at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 171.0) no description available & (gnl|cdd|85596 : 128.0) no description available & (reliability: 412.0) & (original description: Putative rp49, Description = 60S ribosomal protein L32, PFAM = PF01655)' T
'29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01797_114419-118485' '(at4g18100 : 198.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 171.0) no description available & (gnl|cdd|85596 : 129.0) no description available & (reliability: 396.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T
'29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf04233_43598-49044' '(at4g18100 : 199.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 170.0) no description available & (gnl|cdd|85596 : 130.0) no description available & (reliability: 398.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold5327_15730-21604' '(at5g15260 : 81.3) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative At5g15260, Description = Ribosomal protein L34e superfamily protein, PFAM = )' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold51316_7897-14136' '(at1g73850 : 336.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 288.0) no description available & (reliability: 672.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold78481_1848-7443' '(at5g39785 : 357.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 272.0) no description available & (reliability: 714.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00000088ctg008_1-5483' '(at3g20260 : 354.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G73850.1); Has 288 Blast hits to 284 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 36; Plants - 99; Viruses - 14; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|87396 : 270.0) no description available & (reliability: 708.0) & (original description: Putative At3g20260, Description = Putative uncharacterized protein At3g20260, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00008560ctg009_327-7060' '(gnl|cdd|87396 : 171.0) no description available & (at5g39785 : 140.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaCnng29140D, Description = BnaCnng29140D protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00008824ctg003_28-5304' '(at5g39785 : 327.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 272.0) no description available & (reliability: 654.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00015237ctg012_5648-10540' '(at1g73850 : 345.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 289.0) no description available & (reliability: 690.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00024463ctg001_1165-8573' '(gnl|cdd|87396 : 300.0) no description available & (at5g39785 : 268.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At1g69610, Description = Putative ovule protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00027156ctg000_11122-16955' '(at3g06180 : 192.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At5g19025, Description = Uncharacterized protein At5g19025, PFAM = )' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00010_378675-386374' '(at1g73850 : 333.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 293.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00155_221945-224613' '(at3g06180 : 82.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative Sb03g037880, Description = Putative uncharacterized protein Sb03g037880, PFAM = )' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00966_166737-173806' '(gnl|cdd|87396 : 299.0) no description available & (at5g39785 : 261.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative At1g69610, Description = Putative ovule protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00966_175313-179423' '(p41098|rl34_tobac : 142.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf01326_393989-400113' '(at5g39785 : 344.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 269.0) no description available & (reliability: 688.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf03393_41648-48415' '(at3g06180 : 190.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative BnaAnng03100D, Description = BnaAnng03100D protein, PFAM = )' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf04290_389305-393672' '(p41098|rl34_tobac : 143.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf05349_117979-129907' '(at3g20260 : 348.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G73850.1); Has 288 Blast hits to 284 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 36; Plants - 99; Viruses - 14; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|87396 : 268.0) no description available & (reliability: 696.0) & (original description: Putative At3g20260, Description = Putative uncharacterized protein At3g20260, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf06537_12368-17260' '(at1g73850 : 345.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 294.0) no description available & (reliability: 690.0) & (original description: Putative BnaC06g34700D, Description = BnaC06g34700D protein, PFAM = PF07891)' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf08357_131070-133735' '(at5g15260 : 205.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative At3g01170, Description = At3g01170, PFAM = )' T
'29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf08724_413906-418641' '(p41098|rl34_tobac : 143.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.3scaffold8284_37488-41617' '(at5g02610 : 122.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 91.3) no description available & (reliability: 244.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.5scaffold1022_326601-470164' '(at5g02610 : 134.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 91.7) no description available & (reliability: 268.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.5scaffold7553_20680-24585' '(at5g02610 : 133.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 106.0) no description available & (reliability: 266.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben044scf00048884ctg001_1-4319' '(at5g02610 : 138.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 87.1) no description available & (q8l805|rl35_wheat : 81.6) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf02639_304277-308245' '(at5g02610 : 137.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 98.2) no description available & (q8l805|rl35_wheat : 80.9) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 274.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf03532_27166-31424' '(at5g02610 : 133.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 87.8) no description available & (q8l805|rl35_wheat : 80.1) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 266.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf05676_753453-757589' '(at5g02610 : 138.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 98.2) no description available & (q8l805|rl35_wheat : 80.5) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf08774_10974-14764' '(at5g02610 : 129.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 101.0) no description available & (reliability: 258.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf10314_121964-130361' '(at5g02610 : 124.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 89.8) no description available & (reliability: 248.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf10747_16461-22231' '(at5g02610 : 145.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 109.0) no description available & (q8l805|rl35_wheat : 84.3) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 290.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T
'29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf00626_127164-130475' '(p52866|rl36_dauca : 124.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 113.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 99.6) no description available & (gnl|cdd|64991 : 91.2) no description available & (reliability: 226.0) & (original description: Putative RPL36B, Description = 60S ribosomal protein L36-2, PFAM = PF01158)' T
'29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf01968_3619-6244' '(p52866|rl36_dauca : 124.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 113.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 101.0) no description available & (gnl|cdd|64991 : 93.2) no description available & (reliability: 226.0) & (original description: Putative RPL36, Description = 60S ribosomal protein L36, PFAM = PF01158)' T
'29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf12718_167514-171186' '(p52866|rl36_dauca : 117.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 114.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 100.0) no description available & (gnl|cdd|64991 : 92.0) no description available & (reliability: 228.0) & (original description: Putative RPL36B, Description = 60S ribosomal protein L36-2, PFAM = PF01158)' T
'29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf01374_343048-345945' '(at1g52300 : 110.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G16080.1); Has 991 Blast hits to 991 proteins in 346 species: Archae - 293; Bacteria - 0; Metazoa - 303; Fungi - 141; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 107.0) no description available & (reliability: 220.0) & (original description: Putative RPL37A, Description = 60S ribosomal protein L37-A, PFAM = PF01907)' T
'29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf01658_305682-310582' '(at1g15250 : 120.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G16080.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 293; Bacteria - 0; Metazoa - 305; Fungi - 141; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 108.0) no description available & (reliability: 240.0) & (original description: Putative RPL37B, Description = 60S ribosomal protein L37-2, PFAM = PF01907)' T
'29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf06216_237659-240727' '(at3g16080 : 120.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT1G52300.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 294; Bacteria - 0; Metazoa - 303; Fungi - 142; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 108.0) no description available & (reliability: 240.0) & (original description: Putative RPL37B, Description = 60S ribosomal protein L37-2, PFAM = PF01907)' T
'29.2.1.2.2.38' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L38' 'niben101scf05848_303313-305300' '(at3g59540 : 104.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38709 : 96.6) no description available & (gnl|cdd|65567 : 95.5) no description available & (reliability: 208.0) & (original description: Putative RPL38, Description = 60S ribosomal protein L38, PFAM = PF01781)' T
'29.2.1.2.2.38' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L38' 'niben101scf06407_45186-48845' '(at3g59540 : 105.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38709 : 97.4) no description available & (gnl|cdd|65567 : 95.9) no description available & (reliability: 210.0) & (original description: Putative RPL38, Description = 60S ribosomal protein L38, PFAM = PF01781)' T
'29.2.1.2.2.39' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L39' '' ''
'29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 254.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T
'29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf02972_920339-926243' '(at3g52590 : 234.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 208.0) no description available & (gnl|cdd|29205 : 145.0) no description available & (p69326|ubiq_wheat : 144.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 468.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T
'29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf09620_704174-800860' '(at3g52590 : 185.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 167.0) no description available & (gnl|cdd|29205 : 143.0) no description available & (p69326|ubiq_wheat : 140.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 370.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T
'29.2.1.2.2.41' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L41' '' ''
'29.2.1.2.2.44' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L44' '' ''
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 352.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 362.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00001830ctg009_3123-7675' '(at3g62870 : 367.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G47610.1); Has 2083 Blast hits to 2081 proteins in 414 species: Archae - 338; Bacteria - 1; Metazoa - 718; Fungi - 357; Plants - 268; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (p35685|rl7a_orysa : 361.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 198.0) no description available & (reliability: 734.0) & (original description: Putative rpl7a, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 372.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 352.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf00110_557369-562820' '(at4g01790 : 137.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); Has 95 Blast hits to 95 proteins in 35 species: Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative T7B11.5, Description = At4g01790, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf00408_895194-899633' '(at2g47610 : 362.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 359.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 199.0) no description available & (reliability: 724.0) & (original description: Putative rpl8, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf02459_307729-312835' '(at3g62870 : 365.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G47610.1); Has 2083 Blast hits to 2081 proteins in 414 species: Archae - 338; Bacteria - 1; Metazoa - 718; Fungi - 357; Plants - 268; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (p35685|rl7a_orysa : 359.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 198.0) no description available & (reliability: 730.0) & (original description: Putative rpl7a, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 362.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03273_254124-258620' '(at2g47610 : 362.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 358.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 199.0) no description available & (reliability: 724.0) & (original description: Putative rpl8, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 362.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 294.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf05955_432793-436224' '(at4g01790 : 129.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); Has 95 Blast hits to 95 proteins in 35 species: Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative T7B11.5, Description = At4g01790, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf06105_67555-71540' '(at2g47610 : 344.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 343.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 196.0) no description available & (reliability: 688.0) & (original description: Putative v1g236492, Description = Predicted protein, PFAM = PF01248)' T
'29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf20261_82957-86879' '(at2g47610 : 365.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 363.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 202.0) no description available & (reliability: 730.0) & (original description: Putative RPL7A, Description = 60S Ribosomal Protein L7A, PFAM = PF01248)' T
'29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf01694_1378315-1383013' '(p50346|rla0_soybn : 432.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at2g40010 : 427.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322; Bacteria - 4; Metazoa - 504; Fungi - 295; Plants - 181; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|36033 : 314.0) no description available & (gnl|cdd|81260 : 165.0) no description available & (reliability: 854.0) & (original description: Putative RPP0A, Description = 60S acidic ribosomal protein P0-1, PFAM = PF00428;PF00466)' T
'29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf02370_187307-191388' '(p50346|rla0_soybn : 456.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at3g09200 : 447.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1417 Blast hits to 1416 proteins in 449 species: Archae - 322; Bacteria - 1; Metazoa - 456; Fungi - 192; Plants - 147; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36033 : 344.0) no description available & (gnl|cdd|81260 : 168.0) no description available & (reliability: 894.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00428;PF00466)' T
'29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf02383_39933-43831' '(p50346|rla0_soybn : 459.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at3g09200 : 449.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1417 Blast hits to 1416 proteins in 449 species: Archae - 322; Bacteria - 1; Metazoa - 456; Fungi - 192; Plants - 147; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36033 : 345.0) no description available & (gnl|cdd|81260 : 167.0) no description available & (reliability: 898.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00466;PF00428)' T
'29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf03906_95179-100260' '(at1g25260 : 298.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1099 Blast hits to 1097 proteins in 339 species: Archae - 116; Bacteria - 0; Metazoa - 360; Fungi - 259; Plants - 172; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36034 : 264.0) no description available & (gnl|cdd|81260 : 82.6) no description available & (reliability: 596.0) & (original description: Putative MRTO4, Description = mRNA turnover protein 4 homolog, PFAM = PF00466)' T
'29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf10947_141577-146755' '(p50346|rla0_soybn : 466.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at2g40010 : 448.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322; Bacteria - 4; Metazoa - 504; Fungi - 295; Plants - 181; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|36033 : 331.0) no description available & (gnl|cdd|81260 : 163.0) no description available & (reliability: 896.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00428;PF00466)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.3scaffold2392_44962-48273' '(gnl|cdd|36973 : 103.0) no description available & (at5g24510 : 92.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 84.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 184.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.3scaffold59406_152-2683' '(gnl|cdd|36973 : 101.0) no description available & (at5g24510 : 93.2) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 91.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 186.4) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.5scaffold613_232822-235327' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 90.1) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 84.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 180.2) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben044scf00009201ctg003_211-2867' '(gnl|cdd|36973 : 106.0) no description available & (at1g01100 : 90.5) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2); Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76; Bacteria - 0; Metazoa - 858; Fungi - 474; Plants - 451; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p52855|rla1_maize : 86.3) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 181.0) & (original description: Putative RpLP1, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben044scf00028455ctg005_2185-5420' '(gnl|cdd|36973 : 104.0) no description available & (at5g24510 : 91.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 87.0) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 182.6) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf01478_24473-27945' '(gnl|cdd|36973 : 108.0) no description available & (at5g24510 : 102.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 91.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf02450_208960-212477' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 85.9) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 82.4) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 171.8) & (original description: Putative prp1, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf02700_228612-231244' '(gnl|cdd|36973 : 106.0) no description available & (at5g47700 : 89.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 86.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 178.8) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf05732_26134-28636' '(gnl|cdd|36973 : 108.0) no description available & (at1g01100 : 89.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2); Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76; Bacteria - 0; Metazoa - 858; Fungi - 474; Plants - 451; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p52855|rla1_maize : 85.1) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 178.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf05867_1-2801' '(gnl|cdd|36973 : 99.7) no description available & (at5g24510 : 94.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 85.9) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 188.0) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf07182_131868-135392' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 88.6) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 84.3) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 177.2) & (original description: Putative prp1, Description = Acidic ribosomal protein 1, PFAM = PF00428)' T
'29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf07202_56133-59444' '(gnl|cdd|36973 : 100.0) no description available & (at5g24510 : 84.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'nbv0.5scaffold79597_1-484' '(gnl|cdd|38659 : 91.1) no description available & (o24415|rla2b_maize : 89.7) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (at2g27710 : 85.9) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 171.8) & (original description: Putative rla6, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben044scf00000941ctg003_1-3960' '(gnl|cdd|38659 : 118.0) no description available & (p46252|rla2a_maize : 86.3) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 80.5) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 161.0) & (original description: Putative RPP2D, Description = 60S acidic ribosomal protein P2-4, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben044scf00005878ctg017_18726-22013' '(gnl|cdd|38659 : 116.0) no description available & (p46252|rla2a_maize : 87.4) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 82.8) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 165.6) & (original description: Putative RPP2B, Description = 60S acidic ribosomal protein P2B, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf02467_145407-147495' '(gnl|cdd|38659 : 99.2) no description available & (at3g28500 : 81.6) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G40040.1); Has 1217 Blast hits to 1216 proteins in 338 species: Archae - 72; Bacteria - 1; Metazoa - 371; Fungi - 279; Plants - 263; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). & (o24415|rla2b_maize : 80.5) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (reliability: 163.2) & (original description: Putative RPP2C, Description = 60S acidic ribosomal protein P2-3, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf03113_180548-184355' '(gnl|cdd|38659 : 120.0) no description available & (p46252|rla2a_maize : 84.7) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 80.1) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 160.2) & (original description: Putative p2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf05804_330507-373666' '(gnl|cdd|38659 : 93.0) no description available & (at3g28500 : 81.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G40040.1); Has 1217 Blast hits to 1216 proteins in 338 species: Archae - 72; Bacteria - 1; Metazoa - 371; Fungi - 279; Plants - 263; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). & (o24415|rla2b_maize : 80.5) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (reliability: 162.6) & (original description: Putative CBG18296, Description = Protein CBG18296, PFAM = PF00428)' T
'29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf11937_233018-236727' '(gnl|cdd|38659 : 116.0) no description available & (o24415|rla2b_maize : 87.4) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (at2g27710 : 84.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 168.6) & (original description: Putative rpp2, Description = Ribosomal protein P2, PFAM = PF00428)' T
'29.2.1.2.2.83' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P3' 'niben044scf00031373ctg006_441-5211' '(at5g57290 : 89.7) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G25890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24413|rla3_maize : 84.0) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) - Zea mays (Maize) & (reliability: 179.4) & (original description: Putative RPP3A, Description = 60S acidic ribosomal protein P3, PFAM = PF00428)' T
'29.2.1.2.2.83' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P3' 'niben101scf17290_1-4493' '(at5g57290 : 92.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G25890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24413|rla3_maize : 92.4) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) - Zea mays (Maize) & (reliability: 184.8) & (original description: Putative RPP3A, Description = 60S acidic ribosomal protein P3, PFAM = PF00428)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'nbv0.3scaffold61563_1347-7471' '(at3g58660 : 267.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 216.0) no description available & (reliability: 534.0) & (original description: Putative BnaC08g29370D, Description = BnaC08g29370D protein, PFAM = PF00687)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'nbv0.5scaffold467_279588-285712' '(at3g58660 : 272.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 219.0) no description available & (reliability: 544.0) & (original description: Putative BnaA04g01900D, Description = BnaA04g01900D protein, PFAM = PF00687)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben044scf00002763ctg004_21273-24776' '(at3g58660 : 270.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 209.0) no description available & (reliability: 540.0) & (original description: Putative BnaA04g01900D, Description = BnaA04g01900D protein, PFAM = PF00687)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf00474_1324935-1332391' '(at5g40080 : 119.0) Mitochondrial ribosomal protein L27; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27/L41, mitochondrial (InterPro:IPR019189); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L27 (TAIR:AT5G39800.1); Has 192 Blast hits to 192 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 37; Plants - 52; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39953 : 90.9) no description available & (reliability: 238.0) & (original description: Putative At5g40080, Description = At5g40080, PFAM = PF09809)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf02537_1857443-1872707' '(at5g40080 : 99.8) Mitochondrial ribosomal protein L27; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27/L41, mitochondrial (InterPro:IPR019189); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L27 (TAIR:AT5G39800.1); Has 192 Blast hits to 192 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 37; Plants - 52; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PHYPADRAFT_223708, Description = Predicted protein, PFAM = PF09809)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf04181_94775-97603' '(at3g58660 : 190.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 145.0) no description available & (reliability: 380.0) & (original description: Putative Ccrd_009346, Description = Ribosomal protein L1, PFAM = PF00687)' T
'29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf04813_336790-344134' '(at3g58660 : 272.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 222.0) no description available & (reliability: 544.0) & (original description: Putative T2D23.8, Description = Ribosomal protein L1p/L10e family, PFAM = PF00687)' T
'29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben044scf00039797ctg000_1-4257' '(at3g09630 : 562.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 450.0) no description available & (gnl|cdd|81272 : 233.0) no description available & (reliability: 1124.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF00573;PF14374)' T
'29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf00294_310049-315068' '(at3g09630 : 556.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 451.0) no description available & (gnl|cdd|81272 : 237.0) no description available & (reliability: 1112.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF14374;PF00573)' T
'29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf00496_154310-158737' '(at3g09630 : 561.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 450.0) no description available & (gnl|cdd|81272 : 232.0) no description available & (reliability: 1122.0) & (original description: Putative RPL4, Description = Ribosomal protein L4, PFAM = PF00573;PF14374)' T
'29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf10228_17169-21503' '(at3g09630 : 554.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 447.0) no description available & (gnl|cdd|81272 : 237.0) no description available & (reliability: 1108.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF14374;PF00573)' T
'29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben044scf00013207ctg001_2680-6993' '(at1g08360 : 339.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 674.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben044scf00038689ctg002_34281-38257' '(at1g08360 : 333.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 247.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 664.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf00085_307657-312830' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 249.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 662.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf02510_433985-438094' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 281.0) no description available & (q9sw75|rl10a_chlre : 248.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 668.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf04134_218521-222713' '(at5g22440 : 338.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 676.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T
'29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben044scf00021399ctg012_1-3610' '(at3g24830 : 234.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G07110.1); Has 2057 Blast hits to 2057 proteins in 651 species: Archae - 298; Bacteria - 471; Metazoa - 343; Fungi - 197; Plants - 326; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). & (o49885|rl13a_luplu : 217.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 144.0) no description available & (gnl|cdd|84874 : 113.0) no description available & (reliability: 468.0) & (original description: Putative RPL13A, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T
'29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf03488_924957-929736' '(at5g48760 : 347.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1); Has 2418 Blast hits to 2418 proteins in 794 species: Archae - 297; Bacteria - 790; Metazoa - 343; Fungi - 187; Plants - 326; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (o49885|rl13a_luplu : 318.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 217.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 694.0) & (original description: Putative rpl16, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T
'29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf06954_389016-393403' '(at3g07110 : 346.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49885|rl13a_luplu : 321.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 219.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 692.0) & (original description: Putative RPL13AB, Description = 60S ribosomal protein L13a-2, PFAM = PF00572)' T
'29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf06980_82199-86042' '(at5g48760 : 345.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1); Has 2418 Blast hits to 2418 proteins in 794 species: Archae - 297; Bacteria - 790; Metazoa - 343; Fungi - 187; Plants - 326; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (o49885|rl13a_luplu : 325.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 219.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 690.0) & (original description: Putative RPL13A, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T
'29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf13099_116503-120602' '(at3g24830 : 230.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G07110.1); Has 2057 Blast hits to 2057 proteins in 651 species: Archae - 298; Bacteria - 471; Metazoa - 343; Fungi - 197; Plants - 326; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). & (o49885|rl13a_luplu : 218.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 141.0) no description available & (gnl|cdd|84874 : 112.0) no description available & (reliability: 460.0) & (original description: Putative rpl13, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T
'29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf02613_112776-116550' '(at1g29970 : 315.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 288.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 252.0) no description available & (gnl|cdd|65561 : 249.0) no description available & (reliability: 630.0) & (original description: Putative RPL18AB, Description = 60S ribosomal protein L18a-2, PFAM = PF01775)' T
'29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf04945_219402-230058' '(at1g17080 : 92.8) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative RPL18AA, Description = 60S ribosomal protein L18a-1, PFAM = )' T
'29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf08792_48052-51892' '(at1g29970 : 312.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 288.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 250.0) no description available & (gnl|cdd|65561 : 247.0) no description available & (reliability: 624.0) & (original description: Putative RPL18a, Description = 60S ribosomal protein L18a, PFAM = PF01775)' T
'29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf12017_30244-34553' '(at1g29970 : 313.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 287.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 252.0) no description available & (gnl|cdd|65561 : 248.0) no description available & (reliability: 626.0) & (original description: Putative RPL18, Description = 60S ribosomal protein L18a, PFAM = PF01775)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'nbv0.3scaffold32222_348-4121' '(q07761|rl23a_tobac : 154.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at3g55280 : 117.0) 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA.; ribosomal protein L23AB (RPL23AB); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AA (TAIR:AT2G39460.2); Has 2615 Blast hits to 2615 proteins in 920 species: Archae - 307; Bacteria - 1160; Metazoa - 408; Fungi - 134; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 113.0) no description available & (reliability: 234.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'nbv0.3scaffold54564_3827-8208' '(q07761|rl23a_tobac : 165.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 153.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 150.0) no description available & (reliability: 306.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF00276;PF03939)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf00059_505657-509563' '(q07761|rl23a_tobac : 193.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 157.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 149.0) no description available & (reliability: 314.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf04391_426479-430847' '(q07761|rl23a_tobac : 174.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36962 : 152.0) no description available & (at2g39460 : 151.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative rp123, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf10015_554586-557635' '(q07761|rl23a_tobac : 167.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 159.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 145.0) no description available & (reliability: 318.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23A, PFAM = PF03939;PF00276)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf14010_178443-182476' '(q07761|rl23a_tobac : 169.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 152.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 149.0) no description available & (reliability: 304.0) & (original description: Putative rp123, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T
'29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf17764_172152-177557' '(q9at35|rl23a_dauca : 106.0) 60S ribosomal protein L23a - Daucus carota (Carrot) & (gnl|cdd|36962 : 98.1) no description available & (at3g55280 : 95.9) 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA.; ribosomal protein L23AB (RPL23AB); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AA (TAIR:AT2G39460.2); Has 2615 Blast hits to 2615 proteins in 920 species: Archae - 307; Bacteria - 1160; Metazoa - 408; Fungi - 134; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF00276)' T
'29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf04099_33804-36247' '(at1g70600 : 225.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 195.0) no description available & (gnl|cdd|81945 : 90.3) no description available & (reliability: 450.0) & (original description: Putative rpl27a, Description = 60S ribosomal protein L27a, PFAM = PF00828)' T
'29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf08873_242755-245198' '(at1g70600 : 230.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 194.0) no description available & (gnl|cdd|81945 : 89.5) no description available & (reliability: 460.0) & (original description: Putative rpl27a, Description = S60 ribosomal protein L27a, PFAM = PF00828)' T
'29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf16592_35334-37777' '(at1g70600 : 230.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 195.0) no description available & (gnl|cdd|81945 : 89.1) no description available & (reliability: 460.0) & (original description: Putative RPL27AB, Description = 60S ribosomal protein L27a-2, PFAM = PF00828)' T
'29.2.1.2.2.535' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A' 'niben044scf00024564ctg004_900-3532' '(at1g74270 : 189.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36105 : 156.0) no description available & (gnl|cdd|65072 : 116.0) no description available & (reliability: 378.0) & (original description: Putative RPL35AA, Description = 60S ribosomal protein L35a-1, PFAM = PF01247)' T
'29.2.1.2.2.535' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A' 'niben101scf05017_414738-417347' '(at1g74270 : 190.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36105 : 156.0) no description available & (gnl|cdd|65072 : 115.0) no description available & (reliability: 380.0) & (original description: Putative RPL35AA, Description = 60S ribosomal protein L35a-1, PFAM = PF01247)' T
'29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf00428_563962-571688' '(q96499|rl44_goshi : 132.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 131.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 111.0) no description available & (gnl|cdd|85135 : 84.2) no description available & (reliability: 262.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T
'29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf01130_119549-121860' '(q96499|rl44_goshi : 132.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 130.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 102.0) no description available & (gnl|cdd|85135 : 82.3) no description available & (reliability: 260.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T
'29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf05551_15472-18754' '(q96499|rl44_goshi : 137.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 135.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 116.0) no description available & (gnl|cdd|85135 : 88.1) no description available & (reliability: 270.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T
'29.2.1.2.2.537' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A' 'niben101scf01489_240614-244268' '(q5qm99|rl37a_orysa : 142.0) 60S ribosomal protein L37a - Oryza sativa (Rice) & (at3g10950 : 138.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G60245.1); Has 1048 Blast hits to 1048 proteins in 363 species: Archae - 286; Bacteria - 0; Metazoa - 326; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35623 : 128.0) no description available & (gnl|cdd|85673 : 116.0) no description available & (reliability: 276.0) & (original description: Putative Os01g0679700, Description = 60S ribosomal protein L37a-1, PFAM = PF01780)' T
'29.2.1.2.2.571' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A/NHP2/SNU13' '' ''
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 374.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00030449ctg004_3546-8237' '(at5g08180 : 172.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 153.0) no description available & (reliability: 344.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf02632_381069-386959' '(at5g08180 : 183.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 152.0) no description available & (reliability: 366.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 364.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 296.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.1.99' 'protein.synthesis.ribosomal protein.unknown' '' ''
'29.2.1.99.1' 'protein.synthesis.ribosomal protein.unknown.small subunit' '' ''
'29.2.1.99.1.1' 'protein.synthesis.ribosomal protein.unknown.small subunit.S1' '' ''
'29.2.1.99.1.2' 'protein.synthesis.ribosomal protein.unknown.small subunit.S2' '' ''
'29.2.1.99.1.4' 'protein.synthesis.ribosomal protein.unknown.small subunit.S4' 'niben044scf00009154ctg002_1751-4358' '(at5g15750 : 281.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39854 : 253.0) no description available & (gnl|cdd|30868 : 80.0) no description available & (reliability: 562.0) & (original description: Putative imp3, Description = IMP3, U3 small nucleolar ribonucleoprotein, homolog, PFAM = PF01479;PF00163)' T
'29.2.1.99.1.4' 'protein.synthesis.ribosomal protein.unknown.small subunit.S4' 'niben101scf06560_312799-316405' '(at5g15750 : 285.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39854 : 256.0) no description available & (gnl|cdd|30868 : 81.9) no description available & (reliability: 570.0) & (original description: Putative imp3, Description = IMP3, U3 small nucleolar ribonucleoprotein, homolog, PFAM = PF01479;PF00163)' T
'29.2.1.99.1.5' 'protein.synthesis.ribosomal protein.unknown.small subunit.S5' '' ''
'29.2.1.99.1.6' 'protein.synthesis.ribosomal protein.unknown.small subunit.S6' '' ''
'29.2.1.99.1.7' 'protein.synthesis.ribosomal protein.unknown.small subunit.S7' '' ''
'29.2.1.99.1.9' 'protein.synthesis.ribosomal protein.unknown.small subunit.S9' 'nbv0.3scaffold22654_2929-9951' '(at3g49080 : 326.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36910 : 192.0) no description available & (gnl|cdd|80536 : 188.0) no description available & (p82278|rr9_spiol : 105.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (reliability: 652.0) & (original description: Putative rpsI, Description = 30S ribosomal protein S9, PFAM = PF00380)' T
'29.2.1.99.1.9' 'protein.synthesis.ribosomal protein.unknown.small subunit.S9' 'niben101scf00363_45020-53489' '(at3g49080 : 323.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36910 : 191.0) no description available & (gnl|cdd|80536 : 188.0) no description available & (p82278|rr9_spiol : 104.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (reliability: 646.0) & (original description: Putative rpsI, Description = 30S ribosomal protein S9, PFAM = PF00380)' T
'29.2.1.99.1.18' 'protein.synthesis.ribosomal protein.unknown.small subunit.S18' '' ''
'29.2.1.99.1.19' 'protein.synthesis.ribosomal protein.unknown.small subunit.S19' '' ''
'29.2.1.99.1.21' 'protein.synthesis.ribosomal protein.unknown.small subunit.S21' '' ''
'29.2.1.99.1.25' 'protein.synthesis.ribosomal protein.unknown.small subunit.S25' '' ''
'29.2.1.99.1.205' 'protein.synthesis.ribosomal protein.unknown.small subunit.S2/S5' '' ''
'29.2.1.99.2' 'protein.synthesis.ribosomal protein.unknown.large subunit' '' ''
'29.2.1.99.2.1' 'protein.synthesis.ribosomal protein.unknown.large subunit.L1' '' ''
'29.2.1.99.2.2' 'protein.synthesis.ribosomal protein.unknown.large subunit.L2' '' ''
'29.2.1.99.2.4' 'protein.synthesis.ribosomal protein.unknown.large subunit.L4' '' ''
'29.2.1.99.2.5' 'protein.synthesis.ribosomal protein.unknown.large subunit.L5' '' ''
'29.2.1.99.2.16' 'protein.synthesis.ribosomal protein.unknown.large subunit.L16' '' ''
'29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'nbv0.3scaffold94352_1-3581' '(at1g14205 : 181.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaC08g39820D, Description = BnaC08g39820D protein, PFAM = PF00861)' T
'29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'niben101scf04082_206354-210227' '(at1g14205 : 192.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|81652 : 83.7) no description available & (reliability: 384.0) & (original description: Putative BnaC08g39820D, Description = BnaC08g39820D protein, PFAM = PF00861)' T
'29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'niben101scf04082_232119-236012' '(at1g14205 : 119.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g14205, Description = 50S ribosomal protein L18, chloroplast, putative, expressed, PFAM = PF00861)' T
'29.2.1.99.2.19' 'protein.synthesis.ribosomal protein.unknown.large subunit.L19' '' ''
'29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'nbv0.3scaffold31141_13299-16083' '(at4g39880 : 182.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|39292 : 87.4) no description available & (reliability: 364.0) & (original description: Putative BnaC01g00750D, Description = BnaC01g00750D protein, PFAM = PF00276)' T
'29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'niben101scf00140_202072-204856' '(at4g39880 : 175.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|39292 : 84.3) no description available & (reliability: 350.0) & (original description: Putative BnaC01g00750D, Description = BnaC01g00750D protein, PFAM = PF00276)' T
'29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'niben101scf26477_7485-9180' '(at4g39880 : 81.6) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative At4g39880, Description = Ribosomal protein L23/L15e family protein, PFAM = )' T
'29.2.1.99.2.27' 'protein.synthesis.ribosomal protein.unknown.large subunit.L27' '' ''
'29.2.1.99.2.34' 'protein.synthesis.ribosomal protein.unknown.large subunit.L34' '' ''
'29.2.1.99.2.36' 'protein.synthesis.ribosomal protein.unknown.large subunit.L36' '' ''
'29.2.1.99.2.39' 'protein.synthesis.ribosomal protein.unknown.large subunit.L39' '' ''
'29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben044scf00009533ctg008_21257-25883' '(at1g08845 : 276.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 251 Blast hits to 251 proteins in 55 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative Heart Stopper, Description = L18 ribosomal protein Heart Stopper, PFAM = PF00861)' T
'29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben101scf00167_53617-56705' '(at3g22450 : 207.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.1); Has 315 Blast hits to 315 proteins in 79 species: Archae - 0; Bacteria - 79; Metazoa - 42; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative At3g22450, Description = Expressed protein, PFAM = PF00861)' T
'29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben101scf04825_52525-57223' '(at1g08845 : 273.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 251 Blast hits to 251 proteins in 55 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative Heart Stopper, Description = L18 ribosomal protein Heart Stopper, PFAM = PF00861)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'nbv0.3scaffold542_86202-96574' '(at5g13720 : 165.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 86.0) no description available & (reliability: 330.0) & (original description: Putative At5g13720, Description = Structural constituent of ribosome protein, PFAM = PF03350;PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'nbv0.5scaffold962_376182-395461' '(at5g13720 : 292.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 122.0) no description available & (reliability: 584.0) & (original description: Putative Sb10g029560, Description = Putative uncharacterized protein Sb10g029560, PFAM = PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben044scf00008465ctg006_446-13067' '(at5g13720 : 291.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 116.0) no description available & (reliability: 582.0) & (original description: Putative AY107414, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben044scf00008465ctg007_1496-6982' '(at5g13720 : 167.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 93.7) no description available & (reliability: 334.0) & (original description: Putative LOC100192831, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf00773_1547989-1556250' '(at3g56010 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400027726, Description = BnaA04g03280D protein, PFAM = )' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf00963_400915-403790' '(at1g54740 : 86.7) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT5G22390.1); Has 534 Blast hits to 376 proteins in 66 species: Archae - 0; Bacteria - 26; Metazoa - 75; Fungi - 14; Plants - 157; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative glysoja_022708, Description = DUF3049 family protein, PFAM = PF11250)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03253_98696-106023' '(at5g13720 : 290.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 117.0) no description available & (reliability: 580.0) & (original description: Putative Sb02g041590, Description = Putative uncharacterized protein Sb02g041590, PFAM = PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03253_100062-119341' '(at5g13720 : 261.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 100.0) no description available & (reliability: 522.0) & (original description: Putative AY107414, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03779_13189-19788' '(at3g56010 : 157.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400027726, Description = BnaA04g03280D protein, PFAM = )' T
'29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf04939_323303-331412' '(at3g26360 : 97.1) Ribosomal protein S21 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative At3g26360, Description = Ribosomal protein S21 family protein, PFAM = PF01165)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'nbv0.3scaffold816_26718-84806' '(at1g67120 : 4530.0) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34868 : 1481.0) no description available & (gnl|cdd|37019 : 617.0) no description available & (reliability: 9060.0) & (original description: Putative Ccrd_015790, Description = AAA+ ATPase domain-containing protein, PFAM = PF07728;PF07728;PF07728;PF07728;PF07728;PF07728;PF07728;PF07728)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'nbv0.5scaffold1864_208539-213604' '(at3g22980 : 1447.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 975.0) no description available & (o23755|ef2_betvu : 437.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 318.0) no description available & (reliability: 2894.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF14492;PF03144;PF00009;PF00679)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00011193ctg005_1-7079' '(at1g52980 : 743.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 651.0) no description available & (gnl|cdd|57929 : 302.0) no description available & (reliability: 1486.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00015787ctg000_1-4866' '(at3g08720 : 500.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 434.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (q6x4a2|cipk1_orysa : 150.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1000.0) & (original description: Putative S6K1, Description = Ribosomal protein S6 kinase, PFAM = PF00069;PF00433)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00030132ctg000_1-8302' '(at1g42440 : 914.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). & (gnl|cdd|37191 : 403.0) no description available & (gnl|cdd|34776 : 242.0) no description available & (reliability: 1828.0) & (original description: Putative At1g42440, Description = At1g42440/F7F22_7, PFAM = PF08142;PF04950)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf00006_279872-284845' '(at3g08720 : 493.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 435.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (q6x4a2|cipk1_orysa : 150.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 986.0) & (original description: Putative pk1, Description = S6 ribosomal protein kinase, PFAM = PF00069;PF00433)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf01157_326020-339739' '(at1g42440 : 1077.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). & (gnl|cdd|37191 : 516.0) no description available & (gnl|cdd|68521 : 346.0) no description available & (reliability: 2154.0) & (original description: Putative At1g42440, Description = At1g42440/F7F22_7, PFAM = PF04950;PF08142)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf01959_742936-751289' '(at1g52980 : 745.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 663.0) no description available & (gnl|cdd|57929 : 304.0) no description available & (reliability: 1490.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02227_73124-90610' '(at3g53470 : 140.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Sb07g024190, Description = Putative uncharacterized protein Sb07g024190, PFAM = )' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02318_148421-156227' '(at5g53920 : 324.0) ribosomal protein L11 methyltransferase-related; FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11 methyltransferase (InterPro:IPR004498), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69826 : 269.0) no description available & (reliability: 648.0) & (original description: Putative prmA, Description = Ribosomal protein L11 methyltransferase, PFAM = PF06325)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02381_564310-569580' '(at5g16140 : 328.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G38290.2); Has 7903 Blast hits to 7899 proteins in 2585 species: Archae - 0; Bacteria - 5295; Metazoa - 47; Fungi - 77; Plants - 129; Viruses - 0; Other Eukaryotes - 2355 (source: NCBI BLink). & (gnl|cdd|48347 : 320.0) no description available & (gnl|cdd|37466 : 249.0) no description available & (reliability: 656.0) & (original description: Putative CRS2, Description = Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic, PFAM = PF01195)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf06565_325865-330646' '(at3g08720 : 593.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 425.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (q6x4a2|cipk1_orysa : 159.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative ATPK2, Description = Serine/threonine-protein kinase AtPK2/AtPK19, PFAM = PF00069;PF00433)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf07445_71454-77874' '(at3g22980 : 1454.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 981.0) no description available & (o23755|ef2_betvu : 442.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 319.0) no description available & (reliability: 2908.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF00009;PF03144;PF00679)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf08729_317257-319817' '(at4g15770 : 315.0) RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome assembly, ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosome biogenesis factor NIP7-like (InterPro:IPR005155), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Ribosome biogenesis factor, NIP7 (InterPro:IPR016686); Has 438 Blast hits to 438 proteins in 213 species: Archae - 5; Bacteria - 0; Metazoa - 151; Fungi - 132; Plants - 49; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38702 : 261.0) no description available & (gnl|cdd|31565 : 133.0) no description available & (reliability: 630.0) & (original description: Putative nip7, Description = 60S ribosome subunit biogenesis protein NIP7 homolog, PFAM = PF03657)' T
'29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf16089_32791-37337' '(at3g08720 : 645.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 444.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (q6x4a2|cipk1_orysa : 160.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1290.0) & (original description: Putative ATPK2, Description = Serine/threonine-protein kinase AtPK2/AtPK19, PFAM = PF00069;PF00433)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold25269_22050-28711' '(at1g43860 : 499.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 319.0) no description available & (gnl|cdd|31689 : 176.0) no description available & (reliability: 998.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold27637_634-10706' '(at3g51270 : 514.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 446.0) no description available & (gnl|cdd|88274 : 304.0) no description available & (reliability: 1028.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold89362_1816-4707' '(at3g01610 : 155.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 115.0) no description available & (gnl|cdd|81248 : 85.3) no description available & (q96372|cdc48_capan : 80.1) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 310.0) & (original description: Putative NVL, Description = Cell division control 48-C-like protein, PFAM = PF00004)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold1026_536758-542391' '(at5g60790 : 944.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 782.0) no description available & (gnl|cdd|30834 : 472.0) no description available & (reliability: 1888.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF12848;PF00005;PF00005)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold2109_257358-263352' '(at3g07050 : 585.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 431.0) no description available & (gnl|cdd|57931 : 274.0) no description available & (reliability: 1170.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926;PF08701)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold5198_65036-78986' '(at3g01610 : 738.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 717.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 363.0) no description available & (reliability: 1476.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00008319ctg000_3469-12446' '(at3g51270 : 508.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 437.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1016.0) & (original description: Putative rio2, Description = Serine/threonine-protein kinase rio2, PFAM = PF01163;PF09202)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00009697ctg005_39129-47035' '(at3g01610 : 716.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 711.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 362.0) no description available & (reliability: 1432.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00039776ctg003_1-4210' '(at3g07050 : 584.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 366.0) no description available & (gnl|cdd|57931 : 284.0) no description available & (reliability: 1168.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf01502_26196-31556' '(at1g50920 : 900.0) Nucleolar GTP-binding protein; FUNCTIONS IN: GTP binding, nucleotide binding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), NOG, C-terminal (InterPro:IPR012973); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 9379 Blast hits to 9179 proteins in 2035 species: Archae - 370; Bacteria - 5195; Metazoa - 1143; Fungi - 469; Plants - 325; Viruses - 0; Other Eukaryotes - 1877 (source: NCBI BLink). & (gnl|cdd|36703 : 782.0) no description available & (gnl|cdd|31281 : 367.0) no description available & (reliability: 1800.0) & (original description: Putative nog1, Description = Nucleolar GTP-binding protein 1, PFAM = PF08155;PF06858)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf03817_1109249-1118596' '(at1g08410 : 706.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (gnl|cdd|36638 : 536.0) no description available & (gnl|cdd|31355 : 167.0) no description available & (reliability: 1282.0) & (original description: Putative lsg1, Description = Large subunit GTPase 1, PFAM = PF01926)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf03872_238007-245118' '(at5g60790 : 925.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 803.0) no description available & (gnl|cdd|30834 : 469.0) no description available & (reliability: 1850.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF12848;PF00005;PF00005)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf06570_545476-554409' '(at3g51270 : 507.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 445.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1014.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf07474_73158-86314' '(at1g43860 : 501.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 321.0) no description available & (gnl|cdd|31689 : 177.0) no description available & (reliability: 1002.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T
'29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf15836_403237-409001' '(at5g60790 : 940.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 793.0) no description available & (gnl|cdd|30834 : 472.0) no description available & (reliability: 1880.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF00005;PF00005;PF12848)' T
'29.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors' '' ''
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben044scf00003354ctg002_15986-18404' '(at4g16630 : 122.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 100.0) no description available & (reliability: 244.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = )' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf02380_186017-193634' '(at5g05450 : 793.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 677.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1586.0) & (original description: Putative RH18, Description = DEAD-box ATP-dependent RNA helicase 18, PFAM = PF00271;PF13959;PF00270)' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf03412_93839-100104' '(at5g05450 : 516.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 452.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 148.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1032.0) & (original description: Putative spb4, Description = ATP-dependent RNA helicase DDX55, PFAM = PF00270;PF00271)' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf04350_286783-302719' '(at1g77030 : 953.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35558 : 563.0) no description available & (gnl|cdd|30859 : 319.0) no description available & (p46942|db10_nicsy : 202.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1906.0) & (original description: Putative RH29, Description = Putative DEAD-box ATP-dependent RNA helicase 29, PFAM = PF08147;PF00270;PF00271)' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf06218_540173-549972' '(at4g16630 : 717.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 660.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 188.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1434.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = PF00270;PF00271)' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf06218_542648-545066' '(at4g16630 : 121.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 99.3) no description available & (reliability: 242.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = )' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf08651_590448-600364' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 643.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 158.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T
'29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf10810_41202-48643' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 636.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 159.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T
'29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben044scf00002993ctg011_5864-9958' '(gnl|cdd|57965 : 388.0) no description available & (at1g06720 : 361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative bms1, Description = Ribosome biogenesis protein bms1, PFAM = PF08142)' T
'29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben044scf00002993ctg012_1-10909' '(at1g06720 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 418.0) no description available & (gnl|cdd|37191 : 101.0) no description available & (reliability: 1370.0) & (original description: Putative BMS1, Description = Ribosome biogenesis protein BMS1-like protein, PFAM = PF04950)' T
'29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben101scf01534_373567-390670' '(at1g06720 : 1176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 727.0) no description available & (gnl|cdd|37191 : 102.0) no description available & (reliability: 2352.0) & (original description: Putative bms1, Description = Bms1l protein, PFAM = PF08142;PF04950)' T
'29.2.2.2.3' 'protein.synthesis.ribosome biogenesis.Assembly factors.WD-repeat proteins' '' ''
'29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'nbv0.3scaffold39596_12503-18797' '(at5g57120 : 99.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T
'29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'nbv0.5scaffold4858_43846-50140' '(at5g57120 : 101.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T
'29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'niben101scf04852_149179-155627' '(at5g57120 : 98.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T
'29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'niben101scf10798_4667-11275' '(at5g57120 : 99.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative nolc1, Description = Nucleolar and coiled-body phosphoprotein 1, PFAM = PF05022)' T
'29.2.2.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications' '' ''
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold800_54557-85708' '(at3g06530 : 796.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 325.0) no description available & (gnl|cdd|87447 : 123.0) no description available & (reliability: 1592.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF08146;PF12397)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold36060_1-8831' '(at5g66540 : 358.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67615 : 245.0) no description available & (gnl|cdd|37811 : 236.0) no description available & (reliability: 716.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold924_89412-112569' '(at3g06530 : 578.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 251.0) no description available & (gnl|cdd|87447 : 123.0) no description available & (reliability: 1156.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF08146)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold958_13053-18791' '(at1g56110 : 729.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 663.0) no description available & (gnl|cdd|31687 : 327.0) no description available & (reliability: 1420.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00005969ctg010_13456-18481' '(at1g56110 : 387.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 320.0) no description available & (gnl|cdd|31687 : 112.0) no description available & (reliability: 734.0) & (original description: Putative sik1, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00009748ctg019_2762-6561' '(at3g57150 : 449.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (gnl|cdd|30021 : 342.0) no description available & (gnl|cdd|37740 : 312.0) no description available & (reliability: 898.0) & (original description: Putative cbf5, Description = H/ACA ribonucleoprotein complex subunit 4, PFAM = PF01509;PF16198;PF08068)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 374.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00025698ctg010_4014-8264' '(gnl|cdd|67615 : 123.0) no description available & (gnl|cdd|37811 : 120.0) no description available & (at5g66540 : 111.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00030449ctg004_3546-8237' '(at5g08180 : 172.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 153.0) no description available & (reliability: 344.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00048133ctg003_1-3549' '(at5g66540 : 187.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67615 : 123.0) no description available & (gnl|cdd|37811 : 119.0) no description available & (reliability: 374.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf02015_171256-175733' '(at3g03920 : 162.0) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (gnl|cdd|68001 : 158.0) no description available & (gnl|cdd|38472 : 109.0) no description available & (reliability: 324.0) & (original description: Putative gar1, Description = H/ACA ribonucleoprotein complex subunit 1, PFAM = PF04410)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf02632_381069-386959' '(at5g08180 : 183.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 152.0) no description available & (reliability: 366.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 364.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03595_1577191-1583678' '(at3g18610 : 169.0) Encodes ATNUC-L2 (NUCLEOLIN LIKE 2).; nucleolin like 2 (NUC-L2); FUNCTIONS IN: nucleotide binding, nucleic acid binding; EXPRESSED IN: egg cell, cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 220619 Blast hits to 110675 proteins in 3421 species: Archae - 647; Bacteria - 30556; Metazoa - 92066; Fungi - 36057; Plants - 14337; Viruses - 1241; Other Eukaryotes - 45715 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative NNF1, Description = Tobacco nucleolin, PFAM = PF00076;PF00076)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf04815_250749-256102' '(at1g56110 : 727.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 662.0) no description available & (gnl|cdd|31687 : 325.0) no description available & (reliability: 1428.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF01798;PF08156)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 296.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf08651_590448-600364' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 643.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 158.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf08706_65050-96609' '(at3g06530 : 1505.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 335.0) no description available & (gnl|cdd|87447 : 124.0) no description available & (reliability: 3010.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF12397;PF08146)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf10810_41202-48643' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 636.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 159.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf12318_87702-92764' '(at3g03920 : 167.0) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (gnl|cdd|68001 : 161.0) no description available & (gnl|cdd|38472 : 105.0) no description available & (reliability: 334.0) & (original description: Putative gar1, Description = H/ACA ribonucleoprotein complex subunit 1, PFAM = PF04410)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf13167_72040-75713' '(at3g57150 : 699.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (gnl|cdd|37740 : 472.0) no description available & (gnl|cdd|81343 : 346.0) no description available & (reliability: 1398.0) & (original description: Putative CBF5, Description = H/ACA ribonucleoprotein complex subunit 4, PFAM = PF01472;PF16198;PF01509;PF08068)' T
'29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf33515_1838-7675' '(at3g05060 : 711.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT5G27120.1); Has 39712 Blast hits to 18529 proteins in 1244 species: Archae - 275; Bacteria - 3520; Metazoa - 14574; Fungi - 4183; Plants - 1688; Viruses - 262; Other Eukaryotes - 15210 (source: NCBI BLink). & (gnl|cdd|37783 : 591.0) no description available & (gnl|cdd|31687 : 305.0) no description available & (reliability: 1422.0) & (original description: Putative NOP58, Description = Nucleolar protein 58, PFAM = PF01798;PF08156)' T
'29.2.2.3.2' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNAs' '' ''
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold55943_1909-8688' '(at5g10620 : 243.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86040 : 159.0) no description available & (reliability: 486.0) & (original description: Putative At5g10620, Description = Putative RNA methyltransferase At5g10620, PFAM = PF02590)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold56873_9743-12855' '(at3g27180 : 128.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaC07g24040D, Description = BnaC07g24040D protein, PFAM = )' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold78133_3095-7536' '(at4g26600 : 267.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 64231 Blast hits to 30815 proteins in 2915 species: Archae - 495; Bacteria - 29426; Metazoa - 12322; Fungi - 6487; Plants - 2396; Viruses - 589; Other Eukaryotes - 12516 (source: NCBI BLink). & (gnl|cdd|36338 : 223.0) no description available & (gnl|cdd|30493 : 164.0) no description available & (reliability: 534.0) & (original description: Putative nop2, Description = Putative ribosomal RNA methyltransferase NOP2, PFAM = PF01189)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.5scaffold2680_1-12470' '(at5g01230 : 535.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36315 : 410.0) no description available & (gnl|cdd|30641 : 179.0) no description available & (reliability: 1070.0) & (original description: Putative FTSJ1, Description = Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, PFAM = PF01728)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00004260ctg012_1-2250' '(at2g39670 : 166.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 129.0) no description available & (reliability: 332.0) & (original description: Putative rlmN, Description = 23S rRNA (adenine(2503)-C(2))-methyltransferase, PFAM = PF04055)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00013355ctg000_13640-17091' '(at4g25730 : 226.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 196.0) no description available & (gnl|cdd|71220 : 130.0) no description available & (reliability: 452.0) & (original description: Putative fsjC, Description = 2'-O-ribose RNA methyltransferase SPB1 homolog, PFAM = PF07780)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00013355ctg001_1-6973' '(at4g25730 : 499.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 399.0) no description available & (gnl|cdd|30641 : 199.0) no description available & (reliability: 998.0) & (original description: Putative fsjC, Description = 2'-O-ribose RNA methyltransferase, PFAM = PF01728;PF11861)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00018787ctg009_2-2717' '(at2g39670 : 227.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 159.0) no description available & (reliability: 454.0) & (original description: Putative rlmN, Description = 23S rRNA (adenine(2503)-C(2))-methyltransferase, PFAM = )' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00044828ctg002_265-4731' '(at1g60230 : 439.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 281.0) no description available & (reliability: 878.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF13394;PF04055)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00061373ctg000_1-5504' '(gnl|cdd|36809 : 382.0) no description available & (at4g25630 : 380.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85352 : 337.0) no description available & (reliability: 760.0) & (original description: Putative FIB3, Description = Putative rRNA 2'-O-methyltransferase fibrillarin 3, PFAM = PF01269)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00046_144438-155903' '(at5g40530 : 339.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-related (InterPro:IPR007823); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38255 : 251.0) no description available & (gnl|cdd|86798 : 244.0) no description available & (reliability: 678.0) & (original description: Putative rrp8, Description = Ribosomal RNA-processing protein 8, PFAM = PF05148)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00167_358664-368643' '(at3g27180 : 613.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32446 : 153.0) no description available & (reliability: 1226.0) & (original description: Putative Sb03g044000, Description = Putative uncharacterized protein Sb03g044000, PFAM = PF03602)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00203_120806-127152' '(at1g60230 : 446.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 286.0) no description available & (reliability: 892.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055;PF13394)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf01155_530376-538073' '(at1g60230 : 579.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 321.0) no description available & (reliability: 1158.0) & (original description: Putative rlmN, Description = Dual-specificity RNA methyltransferase RlmN, PFAM = PF04055;PF13394)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf01982_150230-167191' '(at2g39670 : 544.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 358.0) no description available & (reliability: 1088.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02444_161937-172162' '(at4g25730 : 721.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 573.0) no description available & (gnl|cdd|30641 : 192.0) no description available & (reliability: 1442.0) & (original description: Putative SPB1, Description = AdoMet-dependent rRNA methyltransferase SPB1, PFAM = PF11861;PF07780;PF01728)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02517_1752251-1776012' '(at2g39670 : 482.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 320.0) no description available & (reliability: 964.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02533_37772-54878' '(at5g01230 : 578.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36315 : 458.0) no description available & (gnl|cdd|30641 : 221.0) no description available & (reliability: 1156.0) & (original description: Putative FTSJ1, Description = Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, PFAM = PF01728)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02621_105780-113321' '(at1g50000 : 375.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosomal RNA small subunit methyltransferase E (InterPro:IPR006700); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86669 : 177.0) no description available & (reliability: 750.0) & (original description: Putative At1g50000, Description = Putative ribosomal RNA small subunit methyltransferase, PFAM = PF04452)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf03114_1006887-1012954' '(at4g25630 : 446.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36809 : 440.0) no description available & (gnl|cdd|85352 : 392.0) no description available & (reliability: 892.0) & (original description: Putative MED36B, Description = Probable mediator of RNA polymerase II transcription subunit 36b, PFAM = PF01269)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf05183_131293-139200' '(at4g26600 : 605.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 64231 Blast hits to 30815 proteins in 2915 species: Archae - 495; Bacteria - 29426; Metazoa - 12322; Fungi - 6487; Plants - 2396; Viruses - 589; Other Eukaryotes - 12516 (source: NCBI BLink). & (gnl|cdd|36338 : 536.0) no description available & (gnl|cdd|30493 : 295.0) no description available & (reliability: 1210.0) & (original description: Putative Nop2, Description = Putative ribosomal RNA methyltransferase NOP2, PFAM = PF17125;PF01189)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf07564_192235-201303' '(at3g27180 : 680.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32446 : 153.0) no description available & (reliability: 1360.0) & (original description: Putative BnaC07g24040D, Description = BnaC07g24040D protein, PFAM = PF03602)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf09505_221381-226984' '(at3g19630 : 576.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT1G60230.1); Has 6931 Blast hits to 6927 proteins in 2338 species: Archae - 5; Bacteria - 5129; Metazoa - 1; Fungi - 1; Plants - 138; Viruses - 3; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|31162 : 299.0) no description available & (reliability: 1152.0) & (original description: Putative rlmN, Description = Ribosomal RNA large subunit methyltransferase N, PFAM = PF13394;PF04055)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf11090_69331-75430' '(at5g10620 : 241.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86040 : 161.0) no description available & (reliability: 482.0) & (original description: Putative At5g10620, Description = Putative RNA methyltransferase At5g10620, PFAM = PF02590)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf11727_60733-66412' '(at3g28460 : 372.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4869 Blast hits to 4869 proteins in 1755 species: Archae - 2; Bacteria - 3296; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). & (gnl|cdd|86381 : 168.0) no description available & (reliability: 744.0) & (original description: Putative At3g28460, Description = Methyltransferase, PFAM = PF03602)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf12422_233492-239259' '(at5g50110 : 338.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: rRNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: rRNA small subunit methyltransferase G (InterPro:IPR003682); Has 6840 Blast hits to 6840 proteins in 2435 species: Archae - 0; Bacteria - 5096; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 1704 (source: NCBI BLink). & (gnl|cdd|80517 : 200.0) no description available & (reliability: 676.0) & (original description: Putative gidB, Description = Ribosomal RNA small subunit methyltransferase G, PFAM = PF02527)' T
'29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf24482_1060-6703' '(at1g50000 : 371.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosomal RNA small subunit methyltransferase E (InterPro:IPR006700); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86669 : 173.0) no description available & (reliability: 742.0) & (original description: Putative At1g50000, Description = Putative ribosomal RNA small subunit methyltransferase, PFAM = PF04452)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'nbv0.5scaffold106_641873-651906' '(at4g04940 : 1389.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 978.0) no description available & (gnl|cdd|67792 : 227.0) no description available & (reliability: 2778.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'nbv0.5scaffold6016_91475-107154' '(at5g16750 : 1173.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (gnl|cdd|35540 : 856.0) no description available & (gnl|cdd|29257 : 199.0) no description available & (p93107|pf20_chlre : 90.9) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2346.0) & (original description: Putative Sb06g027070, Description = Putative uncharacterized protein Sb06g027070, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08625)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben044scf00022155ctg004_1578-9986' '(at4g04940 : 1387.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 977.0) no description available & (gnl|cdd|67792 : 232.0) no description available & (reliability: 2774.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf00457_258376-269850' '(at3g21540 : 1150.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G16750.1); Has 119158 Blast hits to 33008 proteins in 859 species: Archae - 80; Bacteria - 11912; Metazoa - 49564; Fungi - 26721; Plants - 15098; Viruses - 0; Other Eukaryotes - 15783 (source: NCBI BLink). & (gnl|cdd|35527 : 749.0) no description available & (gnl|cdd|29257 : 193.0) no description available & (p93107|pf20_chlre : 92.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2300.0) & (original description: Putative UTP12, Description = U3 small nucleolar RNA-associated protein 12, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF04003)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf00883_656880-660455' '(at5g14050 : 595.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 6115 Blast hits to 4690 proteins in 400 species: Archae - 26; Bacteria - 2036; Metazoa - 1593; Fungi - 1149; Plants - 369; Viruses - 2; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|37266 : 511.0) no description available & (gnl|cdd|29257 : 93.1) no description available & (reliability: 1190.0) & (original description: Putative At5g14050, Description = U3 small nucleolar RNA-associated protein 18 homolog, PFAM = PF00400;PF00400)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf01516_72504-83146' '(at4g04940 : 1367.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 960.0) no description available & (gnl|cdd|67792 : 227.0) no description available & (reliability: 2734.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf01970_113931-125291' '(at2g40360 : 905.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), BOP1, N-terminal (InterPro:IPR012953), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35869 : 766.0) no description available & (gnl|cdd|87446 : 320.0) no description available & (reliability: 1810.0) & (original description: Putative bop1, Description = Ribosome biogenesis protein bop1, PFAM = PF08145;PF00400;PF00400;PF00400)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf04260_410645-414303' '(at5g14050 : 618.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 6115 Blast hits to 4690 proteins in 400 species: Archae - 26; Bacteria - 2036; Metazoa - 1593; Fungi - 1149; Plants - 369; Viruses - 2; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|37266 : 520.0) no description available & (gnl|cdd|29257 : 95.4) no description available & (reliability: 1236.0) & (original description: Putative At5g14050, Description = U3 small nucleolar RNA-associated protein 18 homolog, PFAM = PF00400;PF00400;PF00400)' T
'29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf19480_1-3024' '(at2g47990 : 598.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (gnl|cdd|35531 : 514.0) no description available & (gnl|cdd|29257 : 150.0) no description available & (reliability: 1196.0) & (original description: Putative SWA1, Description = Protein SLOW WALKER 1, PFAM = PF09384;PF00400;PF00400;PF00400)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'nbv0.3scaffold53923_2456-9685' '(p41380|if4a3_nicpl : 490.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 454.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (gnl|cdd|35549 : 454.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (reliability: 908.0) & (original description: Putative FAL1, Description = ATP-dependent RNA helicase FAL1, PFAM = PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'nbv0.5scaffold537_400855-427961' '(at2g06990 : 1553.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1397.0) no description available & (gnl|cdd|34219 : 795.0) no description available & (reliability: 3106.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF00271;PF00270;PF08148;PF13234)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00007925ctg009_573-3919' '(gnl|cdd|35551 : 214.0) no description available & (at5g60990 : 203.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30859 : 114.0) no description available & (reliability: 406.0) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00008609ctg005_6805-17119' '(at4g34910 : 627.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (gnl|cdd|35567 : 612.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 144.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1254.0) & (original description: Putative RH16, Description = DEAD-box ATP-dependent RNA helicase 16, PFAM = PF00270;PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00013266ctg009_1-6647' '(at3g09720 : 389.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 233.0) no description available & (gnl|cdd|28928 : 143.0) no description available & (p46942|db10_nicsy : 88.6) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative ddx52, Description = ATP-dependent RNA helicase ROK1, PFAM = PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00013266ctg010_1-2112' '(at3g09720 : 174.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 165.0) no description available & (gnl|cdd|30859 : 97.9) no description available & (reliability: 348.0) & (original description: Putative ddx52, Description = Putative ATP-dependent RNA helicase DDX52, PFAM = PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00016386ctg005_1222-15634' '(at2g06990 : 1473.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1369.0) no description available & (gnl|cdd|34219 : 781.0) no description available & (reliability: 2946.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF00270;PF13234;PF08148;PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00017009ctg002_1-4361' '(gnl|cdd|35551 : 233.0) no description available & (at5g60990 : 226.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30859 : 116.0) no description available & (reliability: 452.0) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00017009ctg004_1-2823' '(at5g60990 : 179.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35551 : 179.0) no description available & (gnl|cdd|28928 : 135.0) no description available & (reliability: 358.0) & (original description: Putative rrp3, Description = ATP-dependent rRNA helicase RRP3, PFAM = PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00027865ctg000_1-3831' '(gnl|cdd|35551 : 116.0) no description available & (at5g60990 : 81.3) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = )' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00028453ctg006_177-4976' '(at3g16840 : 147.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (gnl|cdd|28928 : 109.0) no description available & (gnl|cdd|35568 : 100.0) no description available & (reliability: 294.0) & (original description: Putative mak5, Description = DEAD-box ATP-dependent RNA helicase 13, PFAM = PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00053439ctg000_1-1255' '(at3g18600 : 149.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 140.0) no description available & (gnl|cdd|28928 : 110.0) no description available & (reliability: 284.0) & (original description: Putative has1, Description = ATP-dependent RNA helicase HAS1, PFAM = PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00663_263766-284709' '(at1g17690 : 727.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (gnl|cdd|87173 : 522.0) no description available & (gnl|cdd|37551 : 440.0) no description available & (reliability: 1454.0) & (original description: Putative NOF1, Description = Putative uncharacterized protein At1g17690, PFAM = PF06862)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00730_264307-267880' '(at3g09720 : 349.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 252.0) no description available & (gnl|cdd|30859 : 193.0) no description available & (p46942|db10_nicsy : 105.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 698.0) & (original description: Putative rok1, Description = Putative ATP-dependent RNA helicase DDX52, PFAM = PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00975_254642-258786' '(gnl|cdd|35551 : 111.0) no description available & (at5g60990 : 103.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative vlg2, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = )' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01221_1903327-1920132' '(at3g16840 : 778.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (gnl|cdd|35568 : 447.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 155.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1556.0) & (original description: Putative RH13, Description = DEAD-box ATP-dependent RNA helicase 13, PFAM = PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01395_345426-356530' '(at4g34910 : 632.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (gnl|cdd|35567 : 618.0) no description available & (gnl|cdd|30859 : 270.0) no description available & (p46942|db10_nicsy : 145.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1264.0) & (original description: Putative RH16, Description = DEAD-box ATP-dependent RNA helicase 16, PFAM = PF00270;PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01587_293318-300778' '(p41380|if4a3_nicpl : 773.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 702.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (gnl|cdd|35549 : 683.0) no description available & (gnl|cdd|30859 : 366.0) no description available & (reliability: 1404.0) & (original description: Putative fal1, Description = Eukaryotic initiation factor 4A-III, PFAM = PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01764_244388-253386' '(at3g18600 : 714.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 637.0) no description available & (gnl|cdd|30859 : 329.0) no description available & (p46942|db10_nicsy : 181.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1290.0) & (original description: Putative RH51, Description = DEAD-box ATP-dependent RNA helicase 51, PFAM = PF13959;PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152061-161321' '(at1g33390 : 1098.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 952.0) no description available & (gnl|cdd|31829 : 271.0) no description available & (reliability: 2196.0) & (original description: Putative FAS4, Description = ATP-dependent RNA helicase DEAH13, PFAM = PF07717;PF00271;PF00270;PF04408)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152073-159424' '(at1g33390 : 934.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 802.0) no description available & (gnl|cdd|31829 : 248.0) no description available & (reliability: 1868.0) & (original description: Putative FAS4, Description = Putative ATP-dependent RNA helicase kurz, PFAM = PF00271;PF04408;PF07717)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152516-155610' '(at1g33390 : 369.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 259.0) no description available & (gnl|cdd|31829 : 86.9) no description available & (reliability: 738.0) & (original description: Putative FAS4, Description = Putative ATP-dependent RNA helicase kurz, PFAM = PF07717;PF04408)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02380_186017-193634' '(at5g05450 : 793.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 677.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1586.0) & (original description: Putative RH18, Description = DEAD-box ATP-dependent RNA helicase 18, PFAM = PF00271;PF13959;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf03412_93839-100104' '(at5g05450 : 516.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 452.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 148.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1032.0) & (original description: Putative spb4, Description = ATP-dependent RNA helicase DDX55, PFAM = PF00270;PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf04350_286783-302719' '(at1g77030 : 953.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35558 : 563.0) no description available & (gnl|cdd|30859 : 319.0) no description available & (p46942|db10_nicsy : 202.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1906.0) & (original description: Putative RH29, Description = Putative DEAD-box ATP-dependent RNA helicase 29, PFAM = PF08147;PF00270;PF00271)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf04515_51752-66635' '(at2g06990 : 1565.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1399.0) no description available & (gnl|cdd|34219 : 802.0) no description available & (reliability: 3130.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF08148;PF13234;PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf06277_538836-543544' '(at2g06990 : 323.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 262.0) no description available & (gnl|cdd|87448 : 199.0) no description available & (reliability: 646.0) & (original description: Putative mtr4, Description = Superkiller viralicidic activity 2-like 2, PFAM = PF08148)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf06277_539613-552459' '(at2g06990 : 1497.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1394.0) no description available & (gnl|cdd|34219 : 806.0) no description available & (reliability: 2994.0) & (original description: Putative mtr4, Description = Antiviral helicase, PFAM = PF13234;PF08148;PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf10910_178087-189199' '(at1g31970 : 671.0) STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink). & (gnl|cdd|35552 : 466.0) no description available & (gnl|cdd|30859 : 348.0) no description available & (p46942|db10_nicsy : 319.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1342.0) & (original description: Putative dbp3, Description = ATP-dependent RNA helicase DBP3, PFAM = PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf12280_177465-185079' '(at1g16280 : 578.0) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (gnl|cdd|35561 : 547.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (q40468|if415_tobac : 176.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 1156.0) & (original description: Putative RH36, Description = DEAD-box ATP-dependent RNA helicase 36, PFAM = PF00271;PF00270)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf13762_258890-267348' '(at5g54910 : 777.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35564 : 684.0) no description available & (gnl|cdd|30859 : 289.0) no description available & (p46942|db10_nicsy : 167.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1554.0) & (original description: Putative RH32, Description = DEAD-box ATP-dependent RNA helicase 32, PFAM = PF00271;PF00270;PF13959)' T
'29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf20596_72865-92564' '(at3g09720 : 687.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 490.0) no description available & (gnl|cdd|30859 : 314.0) no description available & (p46942|db10_nicsy : 182.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1374.0) & (original description: Putative RH57, Description = DEAD-box ATP-dependent RNA helicase 57, PFAM = PF00271;PF00270)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold25269_22050-28711' '(at1g43860 : 499.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 319.0) no description available & (gnl|cdd|31689 : 176.0) no description available & (reliability: 998.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold27637_634-10706' '(at3g51270 : 514.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 446.0) no description available & (gnl|cdd|88274 : 304.0) no description available & (reliability: 1028.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold40813_3037-5939' '(at3g22660 : 213.0) rRNA processing protein-related; CONTAINS InterPro DOMAIN/s: Eukaryotic rRNA processing (InterPro:IPR008610); Has 1021 Blast hits to 939 proteins in 244 species: Archae - 0; Bacteria - 62; Metazoa - 355; Fungi - 209; Plants - 58; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|86972 : 151.0) no description available & (gnl|cdd|38290 : 132.0) no description available & (reliability: 426.0) & (original description: Putative At3g22660, Description = Probable rRNA-processing protein EBP2 homolog, PFAM = PF05890)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold47662_9278-12795' '(at2g47420 : 479.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 395.0) no description available & (gnl|cdd|30380 : 245.0) no description available & (reliability: 958.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold101710_598-2927' '(at5g37350 : 96.3) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative NtRIO, Description = Serine/threonine-protein kinase RIO1, PFAM = )' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00002993ctg011_5864-9958' '(gnl|cdd|57965 : 388.0) no description available & (at1g06720 : 361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative bms1, Description = Ribosome biogenesis protein bms1, PFAM = PF08142)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00002993ctg012_1-10909' '(at1g06720 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 418.0) no description available & (gnl|cdd|37191 : 101.0) no description available & (reliability: 1370.0) & (original description: Putative BMS1, Description = Ribosome biogenesis protein BMS1-like protein, PFAM = PF04950)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00008319ctg000_3469-12446' '(at3g51270 : 508.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 437.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1016.0) & (original description: Putative rio2, Description = Serine/threonine-protein kinase rio2, PFAM = PF01163;PF09202)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00030689ctg001_1-3258' '(at2g47420 : 483.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 390.0) no description available & (gnl|cdd|30380 : 243.0) no description available & (reliability: 966.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf00332_692220-696135' '(at2g47420 : 481.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 390.0) no description available & (gnl|cdd|30380 : 242.0) no description available & (reliability: 962.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf01534_373567-390670' '(at1g06720 : 1176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 727.0) no description available & (gnl|cdd|37191 : 102.0) no description available & (reliability: 2352.0) & (original description: Putative bms1, Description = Bms1l protein, PFAM = PF08142;PF04950)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf03093_69683-85961' '(at5g37350 : 701.0) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (gnl|cdd|37481 : 564.0) no description available & (gnl|cdd|88277 : 362.0) no description available & (reliability: 1402.0) & (original description: Putative RIOK1, Description = Serine/threonine-protein kinase RIO1, PFAM = PF01163)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf04184_229098-245892' '(gnl|cdd|38557 : 228.0) no description available & (at5g60340 : 221.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 135.0) no description available & (reliability: 442.0) & (original description: Putative AAK6, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF13238;PF09810)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf05372_540610-544439' '(gnl|cdd|38557 : 154.0) no description available & (at5g60340 : 122.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 86.9) no description available & (reliability: 244.0) & (original description: Putative ak6, Description = AK6, PFAM = PF13238)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf06369_90110-100152' '(at5g37350 : 698.0) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (gnl|cdd|37481 : 558.0) no description available & (gnl|cdd|88277 : 360.0) no description available & (reliability: 1396.0) & (original description: Putative rio1, Description = Serine/threonine-protein kinase rio1, PFAM = PF01163)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf06570_545476-554409' '(at3g51270 : 507.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 445.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1014.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf07027_452631-458813' '(at3g55620 : 451.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|38395 : 430.0) no description available & (o81920|if6_betvu : 336.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (gnl|cdd|29623 : 327.0) no description available & (reliability: 902.0) & (original description: Putative eIF6, Description = Eukaryotic translation initiation factor 6, PFAM = PF01912)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf07474_73158-86314' '(at1g43860 : 501.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 321.0) no description available & (gnl|cdd|31689 : 177.0) no description available & (reliability: 1002.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf14778_31038-35121' '(at3g56510 : 248.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: TATA-binding protein binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38362 : 174.0) no description available & (reliability: 496.0) & (original description: Putative v1g124028, Description = Predicted protein, PFAM = PF00076)' T
'29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf39449_15708-18371' '(at3g22660 : 222.0) rRNA processing protein-related; CONTAINS InterPro DOMAIN/s: Eukaryotic rRNA processing (InterPro:IPR008610); Has 1021 Blast hits to 939 proteins in 244 species: Archae - 0; Bacteria - 62; Metazoa - 355; Fungi - 209; Plants - 58; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|86972 : 160.0) no description available & (gnl|cdd|38290 : 135.0) no description available & (reliability: 444.0) & (original description: Putative At3g22660, Description = Probable rRNA-processing protein EBP2 homolog, PFAM = PF05890)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold1938_5008-11554' '(at1g63780 : 320.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 289.0) no description available & (gnl|cdd|86660 : 118.0) no description available & (reliability: 640.0) & (original description: Putative IMP4, Description = U3 small nucleolar ribonucleoprotein protein IMP4, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold2345_10703-20055' '(at5g61770 : 449.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38174 : 331.0) no description available & (gnl|cdd|86660 : 111.0) no description available & (reliability: 898.0) & (original description: Putative PPAN, Description = Peter Pan-like protein, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold6829_48850-59604' '(at3g15460 : 465.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|38182 : 375.0) no description available & (gnl|cdd|34755 : 246.0) no description available & (reliability: 930.0) & (original description: Putative brix1, Description = Ribosome biogenesis protein BRX1 homolog, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00012366ctg002_2281-5784' '(at1g63780 : 242.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 226.0) no description available & (gnl|cdd|86660 : 120.0) no description available & (reliability: 484.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein IMP4, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00022878ctg001_1020-4238' '(at1g63780 : 147.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 125.0) no description available & (reliability: 294.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein IMP4, PFAM = )' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00044462ctg007_12736-15713' '(at1g63780 : 214.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 197.0) no description available & (gnl|cdd|86660 : 101.0) no description available & (reliability: 428.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein imp4, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf01634_276024-283032' '(at3g15460 : 465.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|38182 : 377.0) no description available & (gnl|cdd|34755 : 247.0) no description available & (reliability: 930.0) & (original description: Putative BRX1, Description = Ribosome biogenesis protein BRX1, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf01956_984749-989996' '(q9awm9|bxdc1_orysa : 391.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (at3g23620 : 382.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|38241 : 288.0) no description available & (gnl|cdd|34709 : 168.0) no description available & (reliability: 764.0) & (original description: Putative rpf2, Description = Ribosome biogenesis protein RPF2 homolog, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf02891_21661-30127' '(at5g61770 : 456.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38174 : 337.0) no description available & (gnl|cdd|86660 : 113.0) no description available & (reliability: 912.0) & (original description: Putative PPAN, Description = Peter Pan-like protein, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf05005_246973-257310' '(at1g63780 : 400.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 355.0) no description available & (gnl|cdd|86660 : 136.0) no description available & (reliability: 800.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein protein, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf13823_222970-229158' '(at4g01560 : 421.0) maternal effect embryo arrest 49 (MEE49); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G63780.1); Has 893 Blast hits to 882 proteins in 227 species: Archae - 2; Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37991 : 334.0) no description available & (gnl|cdd|86660 : 138.0) no description available & (reliability: 842.0) & (original description: Putative rpf1, Description = Ribosome production factor 1, PFAM = PF04427)' T
'29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf15995_199697-210758' '(at1g63780 : 463.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 423.0) no description available & (gnl|cdd|86660 : 168.0) no description available & (reliability: 926.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein protein, PFAM = PF04427)' T
'29.2.2.99' 'protein.synthesis.ribosome biogenesis.misc' '' ''
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold4521_939-6489' '(at1g53900 : 577.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 457.0) no description available & (gnl|cdd|85181 : 233.0) no description available & (reliability: 1154.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold9198_7011-16479' '(at3g60240 : 721.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 300.0) no description available & (gnl|cdd|86149 : 178.0) no description available & (q03387|if41_wheat : 168.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (reliability: 1442.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold9950_46456-49572' '(at4g20980 : 822.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|37690 : 746.0) no description available & (gnl|cdd|68656 : 712.0) no description available & (reliability: 1644.0) & (original description: Putative TIF3D1, Description = Eukaryotic translation initiation factor 3 subunit D, PFAM = PF05091)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold10636_24088-32994' '(at1g48410 : 1507.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 860.0) no description available & (gnl|cdd|72942 : 567.0) no description available & (reliability: 2830.0) & (original description: Putative AGO1, Description = Protein argonaute 1, PFAM = PF16488;PF16486;PF16487;PF02170;PF08699;PF02171;PF12764)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold10678_40708-47904' '(q94hf1|if3c_orysa : 350.0) Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) & (at4g33250 : 337.0) Encodes initiation factor 3k (EIF3k).; eukaryotic translation initiation factor 3K (EIF3K); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Translation initiation factor 3, subunit 12, N-terminal, eukaryotic (InterPro:IPR016020), Translation initiation factor 3, subunit 12, eukaryotic (InterPro:IPR009374), Armadillo-type fold (InterPro:IPR016024), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 423 Blast hits to 423 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 100; Plants - 89; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38462 : 244.0) no description available & (gnl|cdd|67037 : 86.5) no description available & (reliability: 674.0) & (original description: Putative TIF3K1, Description = Eukaryotic translation initiation factor 3 subunit K, PFAM = PF10075)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold14382_28968-31981' '(at1g10840 : 542.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 273.0) no description available & (reliability: 1084.0) & (original description: Putative TIF3H1, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold21099_3732-10129' '(at1g04170 : 841.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 826.0) no description available & (gnl|cdd|34854 : 571.0) no description available & (q9tjq8|eftu_prowi : 90.1) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1682.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF03144;PF09173)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22132_23199-31529' '(at5g57870 : 822.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 776.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 417.0) no description available & (gnl|cdd|86149 : 167.0) no description available & (reliability: 1644.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02847;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22290_20563-31385' '(at2g13540 : 332.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 206.0) no description available & (reliability: 664.0) & (original description: Putative cbp80, Description = Truncated nuclear cap-binding protein, PFAM = PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22528_22516-26409' '(q40467|if414_tobac : 822.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 777.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 574.0) no description available & (gnl|cdd|30859 : 378.0) no description available & (reliability: 1554.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold29177_132-4503' '(p41381|if4a8_tobac : 745.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 682.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (gnl|cdd|35548 : 495.0) no description available & (gnl|cdd|30859 : 323.0) no description available & (reliability: 1364.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold31186_4106-8799' '(p41381|if4a8_tobac : 819.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 756.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (gnl|cdd|35548 : 565.0) no description available & (gnl|cdd|30859 : 373.0) no description available & (reliability: 1512.0) & (original description: Putative eif4a1b, Description = Eif4a1b protein, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold36209_645-7733' '(at3g07300 : 506.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 368.0) no description available & (gnl|cdd|31377 : 179.0) no description available & (reliability: 1012.0) & (original description: Putative eif2Bb, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold45731_2797-12691' '(at4g23330 : 126.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). & (reliability: 252.0) & (original description: Putative BnaC01g14900D, Description = BnaC01g14900D protein, PFAM = PF10157)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold54128_1-6512' '(at2g45730 : 489.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 360.0) no description available & (gnl|cdd|67789 : 246.0) no description available & (reliability: 978.0) & (original description: Putative F751_2956, Description = tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, PFAM = PF04189)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold57290_539-11115' '(at1g76810 : 1013.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 527.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2026.0) & (original description: Putative IF2P, Description = Eukaryotic translation initiation factor, PFAM = PF11987;PF00009;PF03144)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold70394_394-8391' '(o24473|if2b_wheat : 385.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 360.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 283.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 720.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold79223_2861-6255' '(p48724|if5_phavu : 449.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 434.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 358.0) no description available & (gnl|cdd|85734 : 150.0) no description available & (reliability: 868.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold97838_1-4108' '(q40471|if4a9_tobac : 535.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 525.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 428.0) no description available & (gnl|cdd|30859 : 285.0) no description available & (reliability: 1050.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold119_942798-951843' '(at1g10840 : 552.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1104.0) & (original description: Putative eif, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold434_1405-4346' '(at5g25780 : 439.0) member of eIF3b - eukaryotic initiation factor 3b; eukaryotic translation initiation factor 3B-2 (EIF3B-2); FUNCTIONS IN: protein binding, nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor eIF-3b (InterPro:IPR011400), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56821|if39_tobac : 435.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37525 : 276.0) no description available & (gnl|cdd|72087 : 252.0) no description available & (reliability: 878.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold489_25149-51365' '(at2g13540 : 1048.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 601.0) no description available & (gnl|cdd|87792 : 151.0) no description available & (reliability: 2096.0) & (original description: Putative ABH1, Description = Nuclear cap-binding protein subunit 1, PFAM = PF09088;PF09090;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold644_370833-381630' '(at5g36230 : 284.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 244.0) no description available & (gnl|cdd|47818 : 88.0) no description available & (reliability: 568.0) & (original description: Putative gpm710, Description = Basic leucine zipper and W2 domain-containing protein 2, PFAM = PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold679_128627-140501' '(at3g60240 : 627.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 268.0) no description available & (q03387|if41_wheat : 177.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 171.0) no description available & (reliability: 1254.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold1246_97150-101531' '(q40468|if415_tobac : 715.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 689.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 535.0) no description available & (gnl|cdd|30859 : 363.0) no description available & (reliability: 1378.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold1601_224500-227924' '(at5g43810 : 184.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|72942 : 161.0) no description available & (gnl|cdd|36259 : 141.0) no description available & (reliability: 368.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2017_101859-111170' '(q40554|if3a_tobac : 1085.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (at4g11420 : 949.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (gnl|cdd|37283 : 761.0) no description available & (reliability: 1898.0) & (original description: Putative TIF3A1, Description = Eukaryotic translation initiation factor 3 subunit A, PFAM = PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2261_230637-233732' '(at1g63410 : 153.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 147.0) no description available & (reliability: 292.0) & (original description: Putative At1g63410, Description = Protein LURP-one-related 4, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2352_199011-210104' '(at1g73180 : 663.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 456.0) no description available & (gnl|cdd|72087 : 286.0) no description available & (p56821|if39_tobac : 83.2) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (reliability: 1326.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2369_65-9160' '(at5g57870 : 813.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 766.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 419.0) no description available & (gnl|cdd|86149 : 170.0) no description available & (reliability: 1626.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2552_86996-98202' '(gnl|cdd|69777 : 337.0) no description available & (at3g26400 : 210.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative SNS, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273;PF06273)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3262_159402-183362' '(at2g34970 : 793.0) Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT4G18300.1); Has 8121 Blast hits to 7961 proteins in 1548 species: Archae - 574; Bacteria - 3735; Metazoa - 1296; Fungi - 469; Plants - 387; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink). & (gnl|cdd|36674 : 669.0) no description available & (gnl|cdd|31401 : 165.0) no description available & (reliability: 1586.0) & (original description: Putative At2g34970, Description = At2g34970, PFAM = PF00483;PF00132;PF00132)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3393_220154-223488' '(p48724|if5_phavu : 468.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 430.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 345.0) no description available & (gnl|cdd|85734 : 148.0) no description available & (reliability: 860.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3474_104555-110513' '(p56821|if39_tobac : 1214.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 1043.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 622.0) no description available & (gnl|cdd|34929 : 286.0) no description available & (reliability: 2086.0) & (original description: Putative TIF3B1, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF00076;PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3474_107027-111509' '(p56821|if39_tobac : 153.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 118.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 84.6) no description available & (reliability: 236.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = )' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3765_163838-169888' '(o81482|if4e2_maize : 265.0) Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Zea mays (Maize) & (gnl|cdd|85593 : 232.0) no description available & (at5g35620 : 226.0) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.; LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1); FUNCTIONS IN: RNA binding, RNA 7-methylguanosine cap binding, translation initiation factor activity; INVOLVED IN: translational initiation, response to virus; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36883 : 206.0) no description available & (reliability: 452.0) & (original description: Putative eIF(iso)4E, Description = Eukarytic translation initiation factor, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold5137_110265-125453' '(p35683|if4a_orysa : 462.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 454.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 370.0) no description available & (gnl|cdd|30859 : 260.0) no description available & (reliability: 908.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold5478_28036-30863' '(gnl|cdd|69019 : 236.0) no description available & (gnl|cdd|36292 : 204.0) no description available & (q9xhm1|if38_medtr : 194.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 189.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (reliability: 378.0) & (original description: Putative eif3c, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold6201_9792-15875' '(at1g66070 : 142.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 112.0) no description available & (gnl|cdd|40010 : 97.5) no description available & (reliability: 284.0) & (original description: Putative PHYPADRAFT_128429, Description = Predicted protein, PFAM = PF08597)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold7010_11954-22250' '(at5g19210 : 579.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30859 : 222.0) no description available & (gnl|cdd|35551 : 183.0) no description available & (p46942|db10_nicsy : 125.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1158.0) & (original description: Putative RH58, Description = DEAD-box ATP-dependent RNA helicase 58, chloroplastic, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold7330_5213-16332' '(at2g40290 : 385.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38127 : 321.0) no description available & (gnl|cdd|31290 : 177.0) no description available & (reliability: 770.0) & (original description: Putative tif211, Description = Eukaryotic translation initiation factor 2 subunit alpha, PFAM = PF00575;PF07541)' T
'29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold8259_7364-16000' '(at5g19210 : 236.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35551 : 145.0) no description available & (gnl|cdd|30859 : 125.0) no description available & (p46942|db10_nicsy : 100.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 472.0) & (original description: Putative VDL', Description = Putative chloroplast RNA helicase VDL' isoform 5, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00001874ctg005_7634-14619' '(at2g05830 : 428.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: cellular biosynthetic process, translational initiation, cellular metabolic process; LOCATED IN: endomembrane system, eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (InterPro:IPR005251), Initiation factor 2B related (InterPro:IPR000649), Initiation factor 2B alpha/beta/delta (InterPro:IPR011559); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT3G07300.3); Has 4761 Blast hits to 4761 proteins in 1019 species: Archae - 363; Bacteria - 1753; Metazoa - 515; Fungi - 379; Plants - 224; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink). & (gnl|cdd|36681 : 398.0) no description available & (gnl|cdd|30531 : 322.0) no description available & (reliability: 856.0) & (original description: Putative CIG2, Description = Methylthioribose-1-phosphate isomerase, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00005084ctg026_1203-12864' '(at3g60240 : 641.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 268.0) no description available & (gnl|cdd|86149 : 174.0) no description available & (q03387|if41_wheat : 172.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (reliability: 1282.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02847;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00007954ctg000_6255-8864' '(q40470|if4a7_tobac : 350.0) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 338.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 269.0) no description available & (gnl|cdd|28928 : 225.0) no description available & (reliability: 676.0) & (original description: Putative EIF4A1, Description = Eukaryotic initiation factor 4A-I, PFAM = PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00012029ctg004_1599-10842' '(at1g10840 : 527.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1054.0) & (original description: Putative eIF3s3, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00013928ctg001_1-6490' '(at1g04170 : 834.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 828.0) no description available & (gnl|cdd|34854 : 572.0) no description available & (q9tjq8|eftu_prowi : 88.2) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1668.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF09173;PF03144)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00016243ctg019_31414-38441' '(q9xhm1|if38_medtr : 1034.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1013.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 966.0) no description available & (gnl|cdd|69019 : 776.0) no description available & (reliability: 2026.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470;PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00017307ctg014_11702-14844' '(at1g53900 : 271.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 230.0) no description available & (gnl|cdd|85181 : 136.0) no description available & (reliability: 542.0) & (original description: Putative GCN3, Description = Translation initiation factor eIF2B subunit alpha, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00017543ctg003_5788-14485' '(at5g43810 : 1608.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 846.0) no description available & (gnl|cdd|72942 : 561.0) no description available & (reliability: 3216.0) & (original description: Putative AGO10, Description = Protein argonaute 10, PFAM = PF16488;PF02170;PF16486;PF08699;PF02171;PF16487)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00018073ctg013_271-3704' '(p48724|if5_phavu : 465.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 429.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 345.0) no description available & (gnl|cdd|85734 : 148.0) no description available & (reliability: 858.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00019236ctg007_1-9161' '(at5g42220 : 397.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 12270 Blast hits to 6672 proteins in 779 species: Archae - 2; Bacteria - 272; Metazoa - 5255; Fungi - 1469; Plants - 2655; Viruses - 175; Other Eukaryotes - 2442 (source: NCBI BLink). & (gnl|cdd|39449 : 213.0) no description available & (gnl|cdd|29211 : 112.0) no description available & (reliability: 794.0) & (original description: Putative At5g42220, Description = AT5g42220/K5J14_2, PFAM = PF00240)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00021592ctg002_4895-8000' '(at1g53900 : 150.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 149.0) no description available & (reliability: 300.0) & (original description: Putative At1g53870, Description = Initiation factor 2B-related protein, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00028286ctg001_1-6438' '(o24473|if2b_wheat : 372.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 352.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 279.0) no description available & (gnl|cdd|85734 : 176.0) no description available & (reliability: 704.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00032642ctg008_4161-10339' '(at3g57290 : 767.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37969 : 613.0) no description available & (gnl|cdd|87985 : 187.0) no description available & (reliability: 1534.0) & (original description: Putative TIF3E1, Description = Eukaryotic translation initiation factor 3 subunit E, PFAM = PF09440;PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00034990ctg010_1-8700' '(at1g48410 : 1508.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 847.0) no description available & (gnl|cdd|72942 : 552.0) no description available & (reliability: 2730.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF08699;PF12764;PF02171;PF16487;PF16488;PF02170;PF16486)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00040906ctg001_1576-7463' '(p56821|if39_tobac : 1222.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 1049.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 625.0) no description available & (gnl|cdd|34929 : 285.0) no description available & (reliability: 2098.0) & (original description: Putative TIF3B1, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF00076;PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00045823ctg007_1-6595' '(q9xhm1|if38_medtr : 1037.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1014.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 960.0) no description available & (gnl|cdd|69019 : 772.0) no description available & (reliability: 2028.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470;PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00050736ctg001_4444-12578' '(at5g19210 : 567.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30859 : 223.0) no description available & (gnl|cdd|35552 : 184.0) no description available & (p46942|db10_nicsy : 126.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1134.0) & (original description: Putative RH58, Description = DEAD-box ATP-dependent RNA helicase 58, chloroplastic, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'niben044scf00052524ctg002_4334-13045' '(gnl|cdd|69777 : 343.0) no description available & (at3g26400 : 226.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative EIF4B1, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00063_346699-350960' '(p69040|if5a1_tobac : 310.0) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-4D) - Nicotiana tabacum (Common tobacco) & (at1g13950 : 268.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|85363 : 87.2) no description available & (reliability: 536.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00176_249815-256341' '(at1g11480 : 248.0) eukaryotic translation initiation factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 398 Blast hits to 374 proteins in 109 species: Archae - 0; Bacteria - 21; Metazoa - 180; Fungi - 52; Plants - 82; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative At1g11480, Description = At1g11480/T23J18_15, PFAM = )' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00181_69467-80727' '(at1g76810 : 1009.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 93.6) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2018.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF00009;PF11987)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00394_12035-16340' '(q40465|if411_tobac : 823.0) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 779.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 572.0) no description available & (gnl|cdd|30859 : 376.0) no description available & (reliability: 1558.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00484_82007-90087' '(at5g18110 : 322.0) novel cap-binding protein (NCBP); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36882 : 280.0) no description available & (gnl|cdd|85593 : 244.0) no description available & (o81481|if4e1_maize : 119.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (reliability: 644.0) & (original description: Putative NCBP, Description = Eukaryotic translation initiation factor NCBP, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00503_1113435-1116753' '(gnl|cdd|38613 : 192.0) no description available & (at5g35680 : 188.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1). & (p47815|if1a_wheat : 176.0) Eukaryotic translation initiation factor 1A (EIF-1A) (EIF-4C) - Triticum aestivum (Wheat) & (gnl|cdd|47929 : 100.0) no description available & (reliability: 376.0) & (original description: Putative if1a, Description = Eukaryotic translation initiation factor 1A, PFAM = PF01176)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00611_1137290-1141930' '(q40471|if4a9_tobac : 828.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 769.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 569.0) no description available & (gnl|cdd|30859 : 380.0) no description available & (reliability: 1538.0) & (original description: Putative EIF4A2, Description = Eukaryotic initiation factor 4A-II, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00647_364684-369612' '(at3g11400 : 362.0) One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).; eukaryotic translation initiation factor 3G1 (EIF3G1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor 3, RNA-binding subunit (InterPro:IPR017334); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G2 (TAIR:AT5G06000.1); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|35344 : 294.0) no description available & (reliability: 724.0) & (original description: Putative eif3g, Description = Eukaryotic translation initiation factor 3 subunit G, PFAM = PF12353;PF00076)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00713_20854-41653' '(q40554|if3a_tobac : 1261.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (at4g11420 : 948.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (gnl|cdd|37283 : 776.0) no description available & (reliability: 1896.0) & (original description: Putative TIF3A1, Description = Eukaryotic translation initiation factor 3 subunit A, PFAM = PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00717_110166-113058' '(at1g63410 : 149.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 146.0) no description available & (reliability: 296.0) & (original description: Putative At1g53870, Description = Protein LURP-one-related 2, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00863_265696-276665' '(gnl|cdd|36359 : 1006.0) no description available & (at1g76810 : 1002.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2004.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF11987;PF00009)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00870_1598207-1602578' '(p41381|if4a8_tobac : 820.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 757.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 562.0) no description available & (gnl|cdd|30859 : 370.0) no description available & (reliability: 1514.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00887_90513-99759' '(at1g48410 : 1504.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 863.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 2830.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF02170;PF16487;PF02171;PF12764;PF16486;PF08699;PF16488)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf00962_449862-453256' '(at1g77840 : 465.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (p48724|if5_phavu : 464.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|37978 : 355.0) no description available & (gnl|cdd|85734 : 151.0) no description available & (reliability: 930.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF02020;PF01873)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01215_146251-149785' '(at4g27130 : 194.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33278|sui1_orysa : 194.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (gnl|cdd|36981 : 153.0) no description available & (gnl|cdd|29592 : 86.0) no description available & (reliability: 388.0) & (original description: Putative eIF, Description = Eukaryotic translation initiation factor 1, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01240_630382-638517' '(p55871|if2b_maldo : 384.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) - Malus domestica (Apple) (Malus sylvestris) & (at5g20920 : 362.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 280.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 724.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01269_844115-846450' '(at5g54940 : 177.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56330|sui1_maize : 171.0) Protein translation factor SUI1 homolog (Protein GOS2) - Zea mays (Maize) & (gnl|cdd|36981 : 142.0) no description available & (reliability: 354.0) & (original description: Putative SUI1A, Description = Protein translation factor SUI1, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01382_161837-171068' '(at5g57870 : 790.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 734.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 418.0) no description available & (gnl|cdd|86149 : 167.0) no description available & (reliability: 1580.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02847;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01382_281762-290935' '(at4g30690 : 233.0) Translation initiation factor 3 protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1). & (gnl|cdd|80458 : 169.0) no description available & (reliability: 466.0) & (original description: Putative infC, Description = Translation initiation factor IF-3, PFAM = PF00707;PF05198)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01520_970011-988411' '(at5g19210 : 241.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35551 : 145.0) no description available & (gnl|cdd|30859 : 126.0) no description available & (q41741|if4a_maize : 108.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 482.0) & (original description: Putative VDL', Description = Putative chloroplast RNA helicase VDL' isoform 5, PFAM = PF00271;PF00270)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01571_422784-434648' '(at1g48410 : 1566.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 859.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 2868.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF12764;PF08699;PF16488;PF16486;PF02170;PF16487;PF02171)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01571_430788-434558' '(at1g48410 : 239.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|72942 : 195.0) no description available & (gnl|cdd|36259 : 165.0) no description available & (reliability: 450.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171;PF02171)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01576_58525-62079' '(at2g40780 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38136 : 128.0) no description available & (reliability: 344.0) & (original description: Putative BnaA04g23520D, Description = BnaA04g23520D protein, PFAM = PF01176)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01640_206718-209600' '(p48724|if5_phavu : 471.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 414.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 356.0) no description available & (gnl|cdd|85734 : 150.0) no description available & (reliability: 828.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01669_500416-506594' '(at5g18110 : 332.0) novel cap-binding protein (NCBP); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36882 : 289.0) no description available & (gnl|cdd|85593 : 252.0) no description available & (o81481|if4e1_maize : 122.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (reliability: 664.0) & (original description: Putative NCBP, Description = Eukaryotic translation initiation factor NCBP, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01681_988191-1000326' '(at1g73180 : 662.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 462.0) no description available & (gnl|cdd|72087 : 285.0) no description available & (p56821|if39_tobac : 83.2) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (reliability: 1324.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01681_989537-1000441' '(at1g73180 : 375.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 294.0) no description available & (gnl|cdd|72087 : 244.0) no description available & (reliability: 750.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01695_702590-708269' '(at1g04170 : 842.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 825.0) no description available & (gnl|cdd|34854 : 569.0) no description available & (q9tjq8|eftu_prowi : 91.3) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1684.0) & (original description: Putative eIF2g, Description = Eukaryotic translation initiation factor 2 subunit gamma, PFAM = PF03144;PF00009;PF09173)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01699_63637-73320' '(at5g11900 : 263.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Density-regulated protein DRP1 (InterPro:IPR005873); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38449 : 176.0) no description available & (reliability: 526.0) & (original description: Putative SUI1B, Description = Translation initiation factor SUI1 family protein, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01717_552584-558141' '(q40467|if414_tobac : 823.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 779.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 573.0) no description available & (gnl|cdd|30859 : 377.0) no description available & (reliability: 1558.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01745_541387-553339' '(at3g60240 : 644.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 262.0) no description available & (q03387|if41_wheat : 173.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 171.0) no description available & (reliability: 1288.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02847;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf01817_298759-306468' '(at4g11160 : 842.0) Translation initiation factor 2, small GTP-binding protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT1G17220.1); Has 56805 Blast hits to 56771 proteins in 4188 species: Archae - 1161; Bacteria - 37207; Metazoa - 1733; Fungi - 1367; Plants - 871; Viruses - 1; Other Eukaryotes - 14465 (source: NCBI BLink). & (gnl|cdd|36360 : 672.0) no description available & (gnl|cdd|81514 : 622.0) no description available & (p57997|if2c_phavu : 334.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1684.0) & (original description: Putative infB, Description = Translation initiation factor IF-2, PFAM = PF11987;PF00009)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf02031_69319-74163' '(q40468|if415_tobac : 750.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 699.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 511.0) no description available & (gnl|cdd|30859 : 339.0) no description available & (reliability: 1398.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf02060_382341-388825' '(at1g04170 : 836.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 830.0) no description available & (gnl|cdd|34854 : 574.0) no description available & (q9tjq8|eftu_prowi : 88.2) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1672.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF03144;PF09173)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf02148_65471-68892' '(at1g63410 : 150.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 149.0) no description available & (reliability: 278.0) & (original description: Putative At1g63410, Description = Protein LURP-one-related 4, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf02638_464323-484375' '(o81481|if4e1_maize : 310.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 291.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 262.0) no description available & (gnl|cdd|36883 : 225.0) no description available & (reliability: 582.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf02880_65977-72836' '(o81481|if4e1_maize : 280.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 272.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 241.0) no description available & (gnl|cdd|36883 : 219.0) no description available & (reliability: 544.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03143_1223916-1238679' '(gnl|cdd|69777 : 303.0) no description available & (at3g26400 : 180.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative SNS, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273;PF06273)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03166_39888-44668' '(p56333|if5a1_soltu : 301.0) Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|30580 : 87.5) no description available & (reliability: 534.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03262_192849-199513' '(p56335|if5a3_soltu : 304.0) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 227.0) no description available & (gnl|cdd|30580 : 88.3) no description available & (reliability: 534.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03374_1009942-1013860' '(at3g14260 : 167.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 146.0) no description available & (reliability: 312.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03412_578127-589818' '(at2g40290 : 469.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38127 : 394.0) no description available & (gnl|cdd|31290 : 231.0) no description available & (reliability: 938.0) & (original description: Putative tif211, Description = Eukaryotic translation initiation factor 2 subunit alpha, PFAM = PF07541;PF00575)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03473_147198-157217' '(at2g46290 : 550.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|35862 : 486.0) no description available & (gnl|cdd|29257 : 161.0) no description available & (reliability: 1100.0) & (original description: Putative eIF7, Description = Eukaryotic translation initiation factor 3 subunit I, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03778_172195-176555' '(q40471|if4a9_tobac : 535.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 525.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 428.0) no description available & (gnl|cdd|30859 : 285.0) no description available & (reliability: 1050.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03790_105601-118753' '(at5g57870 : 802.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 768.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 422.0) no description available & (gnl|cdd|86149 : 164.0) no description available & (reliability: 1604.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor isoform 4G-1, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03814_56183-63537' '(at5g43810 : 1351.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 794.0) no description available & (gnl|cdd|72942 : 563.0) no description available & (reliability: 2702.0) & (original description: Putative PHN1, Description = Protein argonaute PNH1, PFAM = PF16486;PF16487;PF08699;PF16488;PF02171;PF02170)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf03823_274131-279965' '(at1g53900 : 579.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 457.0) no description available & (gnl|cdd|85181 : 231.0) no description available & (reliability: 1158.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04073_13051-16178' '(p33278|sui1_orysa : 201.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at1g54290 : 194.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 846 Blast hits to 843 proteins in 268 species: Archae - 14; Bacteria - 1; Metazoa - 362; Fungi - 162; Plants - 197; Viruses - 5; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36981 : 156.0) no description available & (gnl|cdd|29592 : 88.0) no description available & (reliability: 388.0) & (original description: Putative GOS2, Description = Protein translation factor SUI1 homolog, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04077_846346-850521' '(p24922|if5a2_nicpl : 308.0) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g69410 : 272.0) Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.; eukaryotic elongation factor 5A-3 (ELF5A-3); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, translational frameshifting, positive regulation of translational termination, peptidyl-lysine modification to hypusine, positive regulation of translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1); Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255; Bacteria - 0; Metazoa - 363; Fungi - 252; Plants - 260; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|38481 : 232.0) no description available & (gnl|cdd|30580 : 90.2) no description available & (reliability: 544.0) & (original description: Putative ANB1, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04185_325399-350592' '(at3g07300 : 576.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 400.0) no description available & (gnl|cdd|85181 : 193.0) no description available & (reliability: 1152.0) & (original description: Putative eif2Bb, Description = Eukaryotic translation initiation factor 2B beta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04194_59905-65647' '(gnl|cdd|35687 : 676.0) no description available & (at1g04170 : 611.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|34854 : 513.0) no description available & (reliability: 1222.0) & (original description: Putative eIF2g, Description = Eukaryotic translation initiation factor 2 subunit gamma, PFAM = PF09173;PF03144;PF00009)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04225_303654-312814' '(at1g17220 : 1003.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 989.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|81514 : 753.0) no description available & (gnl|cdd|36360 : 699.0) no description available & (reliability: 2006.0) & (original description: Putative IF2CP, Description = Translation initiation factor IF-2, chloroplastic, PFAM = PF11987;PF00009)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04325_146900-158234' '(at2g05830 : 513.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: cellular biosynthetic process, translational initiation, cellular metabolic process; LOCATED IN: endomembrane system, eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (InterPro:IPR005251), Initiation factor 2B related (InterPro:IPR000649), Initiation factor 2B alpha/beta/delta (InterPro:IPR011559); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT3G07300.3); Has 4761 Blast hits to 4761 proteins in 1019 species: Archae - 363; Bacteria - 1753; Metazoa - 515; Fungi - 379; Plants - 224; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink). & (gnl|cdd|36681 : 482.0) no description available & (gnl|cdd|30531 : 389.0) no description available & (reliability: 1026.0) & (original description: Putative CIG2, Description = Methylthioribose-1-phosphate isomerase, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04339_149165-152214' '(p33278|sui1_orysa : 199.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at4g27130 : 190.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36981 : 151.0) no description available & (gnl|cdd|29592 : 85.3) no description available & (reliability: 380.0) & (original description: Putative sui1, Description = SUI1 protein, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04377_3850-12906' '(at1g17220 : 1017.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 1003.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|81514 : 750.0) no description available & (gnl|cdd|36360 : 697.0) no description available & (reliability: 2034.0) & (original description: Putative fliN, Description = Translation initiation factor IF-2, PFAM = PF00009;PF11987)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04396_55661-106122' '(at2g34970 : 844.0) Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT4G18300.1); Has 8121 Blast hits to 7961 proteins in 1548 species: Archae - 574; Bacteria - 3735; Metazoa - 1296; Fungi - 469; Plants - 387; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink). & (gnl|cdd|36674 : 704.0) no description available & (gnl|cdd|31401 : 162.0) no description available & (reliability: 1688.0) & (original description: Putative At2g34970, Description = At2g34970, PFAM = PF00132;PF00132;PF00483;PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04825_258737-268577' '(at5g36230 : 634.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 544.0) no description available & (gnl|cdd|47818 : 88.8) no description available & (reliability: 1268.0) & (original description: Putative gpm710, Description = Eukaryotic initiation factor 5C CG2922-PF, isoform F, PFAM = PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04862_122859-132746' '(gnl|cdd|69777 : 351.0) no description available & (at3g26400 : 202.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative EIF4B2, Description = Eukaryotic translation initiation factor 4B2, PFAM = PF06273;PF06273)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04899_617551-621278' '(at4g20980 : 809.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|37690 : 744.0) no description available & (gnl|cdd|68656 : 709.0) no description available & (reliability: 1618.0) & (original description: Putative eif3D, Description = Eukaryotic translation initiation factor 3 subunit 7, PFAM = PF05091)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf04910_550885-559426' '(q94hf1|if3c_orysa : 356.0) Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) & (at4g33250 : 342.0) Encodes initiation factor 3k (EIF3k).; eukaryotic translation initiation factor 3K (EIF3K); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Translation initiation factor 3, subunit 12, N-terminal, eukaryotic (InterPro:IPR016020), Translation initiation factor 3, subunit 12, eukaryotic (InterPro:IPR009374), Armadillo-type fold (InterPro:IPR016024), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 423 Blast hits to 423 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 100; Plants - 89; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38462 : 246.0) no description available & (gnl|cdd|67037 : 86.9) no description available & (reliability: 684.0) & (original description: Putative TIF3K1, Description = Eukaryotic translation initiation factor 3 subunit K, PFAM = PF10075)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05217_28737-48042' '(at3g07300 : 574.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 401.0) no description available & (gnl|cdd|85181 : 195.0) no description available & (reliability: 1148.0) & (original description: Putative eif2b2, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05217_28743-56099' '(at3g07300 : 401.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 300.0) no description available & (gnl|cdd|85181 : 151.0) no description available & (reliability: 802.0) & (original description: Putative eif2Bb, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05332_113825-126360' '(at5g42220 : 431.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 12270 Blast hits to 6672 proteins in 779 species: Archae - 2; Bacteria - 272; Metazoa - 5255; Fungi - 1469; Plants - 2655; Viruses - 175; Other Eukaryotes - 2442 (source: NCBI BLink). & (gnl|cdd|39449 : 219.0) no description available & (gnl|cdd|29211 : 111.0) no description available & (reliability: 862.0) & (original description: Putative At5g42220, Description = AT5g42220/K5J14_2, PFAM = PF00240)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05411_223784-233209' '(at2g45730 : 518.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 380.0) no description available & (gnl|cdd|67789 : 257.0) no description available & (reliability: 1036.0) & (original description: Putative BnaA04g26370D, Description = BnaA04g26370D protein, PFAM = PF04189)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05584_353977-357926' '(gnl|cdd|38613 : 204.0) no description available & (at5g35680 : 193.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1). & (p47815|if1a_wheat : 179.0) Eukaryotic translation initiation factor 1A (EIF-1A) (EIF-4C) - Triticum aestivum (Wheat) & (gnl|cdd|47929 : 103.0) no description available & (reliability: 386.0) & (original description: Putative if1a, Description = Eukaryotic translation initiation factor 1A, PFAM = PF01176)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05676_632800-638086' '(gnl|cdd|35687 : 692.0) no description available & (at1g04170 : 593.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|34854 : 529.0) no description available & (reliability: 1186.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF09173;PF03144)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05678_223900-230649' '(at5g38640 : 704.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT1G48970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36680 : 583.0) no description available & (gnl|cdd|85181 : 255.0) no description available & (reliability: 1408.0) & (original description: Putative eif2B, Description = Eukaryotic translation initiation factor 2B delta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05827_306956-315246' '(at5g38640 : 611.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT1G48970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36680 : 553.0) no description available & (gnl|cdd|85181 : 254.0) no description available & (reliability: 1222.0) & (original description: Putative EIF2B4, Description = Translation initiation factor eIF-2B subunit delta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf05928_304596-308635' '(p69040|if5a1_tobac : 308.0) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-4D) - Nicotiana tabacum (Common tobacco) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 229.0) no description available & (gnl|cdd|85363 : 86.5) no description available & (reliability: 534.0) & (original description: Putative eIF5A, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf06101_270275-275955' '(at1g04170 : 842.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 828.0) no description available & (gnl|cdd|34854 : 571.0) no description available & (q9tjq8|eftu_prowi : 90.1) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1684.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF03144;PF09173;PF00009)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf06222_65836-78693' '(at1g66070 : 147.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 115.0) no description available & (gnl|cdd|40010 : 94.4) no description available & (reliability: 294.0) & (original description: Putative At5g37475, Description = Eukaryotic translation initiation factor 3 subunit J, PFAM = PF08597)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf06902_250615-262439' '(at3g60240 : 750.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 305.0) no description available & (q03387|if41_wheat : 179.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 179.0) no description available & (reliability: 1500.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07027_452631-458813' '(at3g55620 : 451.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|38395 : 430.0) no description available & (o81920|if6_betvu : 336.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (gnl|cdd|29623 : 327.0) no description available & (reliability: 902.0) & (original description: Putative eIF6, Description = Eukaryotic translation initiation factor 6, PFAM = PF01912)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07069_226552-232621' '(at1g66070 : 152.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 114.0) no description available & (gnl|cdd|40010 : 99.4) no description available & (reliability: 304.0) & (original description: Putative At1g66070, Description = Eukaryotic translation initiation factor 3 subunit J, PFAM = PF08597)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07070_49563-52030' '(gnl|cdd|79229 : 131.0) no description available & (q332u2|if1c_lacsa : 129.0) Translation initiation factor IF-1, chloroplast - Lactuca sativa (Garden lettuce) & (at4g11175 : 103.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), S1, IF1 type (InterPro:IPR006196), Translation initiation factor IF-1 (InterPro:IPR004368); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative infA, Description = Translation initiation factor IF-1, chloroplastic, PFAM = PF01176)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07091_104405-113482' '(at2g27880 : 1085.0) ARGONAUTE 5 (AGO5); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2539 Blast hits to 2399 proteins in 280 species: Archae - 0; Bacteria - 80; Metazoa - 1295; Fungi - 341; Plants - 581; Viruses - 6; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36259 : 786.0) no description available & (gnl|cdd|72942 : 541.0) no description available & (reliability: 1972.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF08699;PF16486;PF02170;PF16488;PF02171)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07252_6477-12204' '(at3g57290 : 768.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37969 : 611.0) no description available & (gnl|cdd|87985 : 187.0) no description available & (reliability: 1536.0) & (original description: Putative TIF3E1, Description = Eukaryotic translation initiation factor 3 subunit E, PFAM = PF09440;PF01399)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07323_92228-101352' '(at1g10840 : 555.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1110.0) & (original description: Putative TIF3H1, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07531_83347-264906' '(at1g53900 : 149.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 135.0) no description available & (reliability: 298.0) & (original description: Putative At1g53870, Description = Protein LURP-one-related 2, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07531_182599-185481' '(at1g53900 : 161.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 148.0) no description available & (reliability: 322.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf07629_54829-98940' '(at2g13540 : 1099.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 644.0) no description available & (gnl|cdd|87792 : 158.0) no description available & (reliability: 2198.0) & (original description: Putative ABH1, Description = Nuclear cap-binding protein subunit 1, PFAM = PF09090;PF09088;PF02854)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08128_50744-57064' '(p56821|if39_tobac : 1138.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 971.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 586.0) no description available & (gnl|cdd|34929 : 267.0) no description available & (reliability: 1942.0) & (original description: Putative IF3B, Description = Eukaryotic translation initiation factor 3B, PFAM = PF00076;PF08662)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08128_53852-57046' '(p56821|if39_tobac : 206.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 162.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PRT, Description = Eukaryotic translation initiation factor 3 subunit, PFAM = )' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08259_254668-261804' '(at2g45730 : 513.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 374.0) no description available & (gnl|cdd|67789 : 255.0) no description available & (reliability: 1026.0) & (original description: Putative At2g45730, Description = Eukaryotic initiation factor 3 gamma subunit family protein, PFAM = PF04189)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08573_150363-161592' '(at5g36230 : 641.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 547.0) no description available & (gnl|cdd|47818 : 88.0) no description available & (reliability: 1282.0) & (original description: Putative gpm710, Description = Eukaryotic initiation factor 5C CG2922-PF, isoform F, PFAM = PF02020)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08588_132298-136129' '(p24922|if5a2_nicpl : 301.0) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g69410 : 273.0) Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.; eukaryotic elongation factor 5A-3 (ELF5A-3); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, translational frameshifting, positive regulation of translational termination, peptidyl-lysine modification to hypusine, positive regulation of translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1); Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255; Bacteria - 0; Metazoa - 363; Fungi - 252; Plants - 260; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|30580 : 90.2) no description available & (reliability: 546.0) & (original description: Putative TIF5A, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08665_125125-140517' '(o24473|if2b_wheat : 370.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 343.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 273.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 686.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf08785_266914-273959' '(o81481|if4e1_maize : 303.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 287.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 255.0) no description available & (gnl|cdd|36883 : 224.0) no description available & (reliability: 574.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf09954_129868-132956' '(p56821|if39_tobac : 318.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 256.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 133.0) no description available & (reliability: 512.0) & (original description: Putative eIF5, Description = eIF-3-eta, PFAM = PF00076)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf10324_208371-216120' '(o81482|if4e2_maize : 271.0) Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Zea mays (Maize) & (gnl|cdd|85593 : 237.0) no description available & (at5g35620 : 235.0) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.; LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1); FUNCTIONS IN: RNA binding, RNA 7-methylguanosine cap binding, translation initiation factor activity; INVOLVED IN: translational initiation, response to virus; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36883 : 209.0) no description available & (reliability: 470.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf10749_321513-323848' '(at5g54940 : 176.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56330|sui1_maize : 170.0) Protein translation factor SUI1 homolog (Protein GOS2) - Zea mays (Maize) & (gnl|cdd|36981 : 141.0) no description available & (reliability: 352.0) & (original description: Putative eIF1, Description = Eukaryotic translation initiation factor 1, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf11262_137875-145880' '(at5g43810 : 1602.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 849.0) no description available & (gnl|cdd|72942 : 563.0) no description available & (reliability: 3204.0) & (original description: Putative AGO10, Description = Protein argonaute 10, PFAM = PF16488;PF08699;PF16487;PF16486;PF02170;PF02171)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf11490_16621-19787' '(p33278|sui1_orysa : 202.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at4g27130 : 192.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36981 : 153.0) no description available & (gnl|cdd|29592 : 88.7) no description available & (reliability: 384.0) & (original description: Putative GOS2, Description = Protein translation factor SUI1 homolog, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf12339_61594-82616' '(at1g53900 : 516.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 415.0) no description available & (gnl|cdd|85181 : 207.0) no description available & (reliability: 1032.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf12404_34613-41834' '(at3g07300 : 506.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 367.0) no description available & (gnl|cdd|85181 : 181.0) no description available & (reliability: 1012.0) & (original description: Putative eif2b2, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf14566_117631-123875' '(at4g30690 : 230.0) Translation initiation factor 3 protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1). & (gnl|cdd|80458 : 173.0) no description available & (reliability: 460.0) & (original description: Putative infC, Description = Translation initiation factor IF-3, PFAM = PF05198;PF00707)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf16416_337942-346326' '(q9xhm1|if38_medtr : 1033.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1011.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 965.0) no description available & (gnl|cdd|69019 : 776.0) no description available & (reliability: 2022.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF01399;PF05470)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf17111_52291-63978' '(at4g23330 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). & (reliability: 300.0) & (original description: Putative BnaC01g14900D, Description = BnaC01g14900D protein, PFAM = PF10157)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf17671_47979-57424' '(at5g57870 : 809.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 774.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 442.0) no description available & (gnl|cdd|86149 : 170.0) no description available & (reliability: 1618.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor isoform 4G-1, PFAM = PF02854;PF02847)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf18156_1-7646' '(at1g71350 : 793.0) eukaryotic translation initiation factor SUI1 family protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Translation initiation factor SUI1 (InterPro:IPR001950), SWIB/MDM2 domain (InterPro:IPR003121), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein (TAIR:AT1G09150.1); Has 1013 Blast hits to 993 proteins in 255 species: Archae - 62; Bacteria - 0; Metazoa - 354; Fungi - 333; Plants - 100; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|37733 : 527.0) no description available & (gnl|cdd|32199 : 85.3) no description available & (reliability: 1586.0) & (original description: Putative EIF2D, Description = Translation initiation factor 2D, PFAM = PF01253)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf18308_189044-193953' '(p56333|if5a1_soltu : 300.0) Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 270.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 228.0) no description available & (gnl|cdd|30580 : 85.2) no description available & (reliability: 540.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf23814_149340-169300' '(gnl|cdd|69019 : 180.0) no description available & (gnl|cdd|36292 : 160.0) no description available & (at3g56150 : 136.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (q9xhm1|if38_medtr : 136.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (reliability: 272.0) & (original description: Putative nip1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf26781_7688-9990' '(q40471|if4a9_tobac : 429.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 414.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 333.0) no description available & (gnl|cdd|30859 : 206.0) no description available & (reliability: 828.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271)' T
'29.2.3' 'protein.synthesis.initiation' 'niben101scf27030_72229-82138' '(at5g11900 : 255.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Density-regulated protein DRP1 (InterPro:IPR005873); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38449 : 175.0) no description available & (reliability: 510.0) & (original description: Putative SUI1B, Description = Translation initiation factor SUI1 family protein, PFAM = PF01253)' T
'29.2.3.1' 'protein.synthesis.initiation.deoxyhypusine synthase' 'niben101scf05438_583554-591126' '(q9sc80|dhys_tobac : 767.0) Deoxyhypusine synthase (EC 2.5.1.46) - Nicotiana tabacum (Common tobacco) & (at5g05920 : 613.0) Encodes a deoxyhypusine synthase.; deoxyhypusine synthase (DHS); INVOLVED IN: embryo sac development, peptidyl-lysine modification to hypusine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyhypusine synthase (InterPro:IPR002773); Has 2057 Blast hits to 2052 proteins in 494 species: Archae - 295; Bacteria - 232; Metazoa - 167; Fungi - 158; Plants - 157; Viruses - 0; Other Eukaryotes - 1048 (source: NCBI BLink). & (gnl|cdd|38135 : 581.0) no description available & (gnl|cdd|85765 : 425.0) no description available & (reliability: 1226.0) & (original description: Putative DHS1, Description = Deoxyhypusine synthase, PFAM = PF01916)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold1222_80163-85295' '(gnl|cdd|37450 : 189.0) no description available & (at3g12390 : 155.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold9284_2721-10615' '(at4g29060 : 896.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 291.0) no description available & (gnl|cdd|36289 : 236.0) no description available & (reliability: 1792.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00575;PF00575;PF00889;PF00889)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold22672_3370-6875' '(at1g30230 : 270.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (o81918|ef1d_betvu : 232.0) Elongation factor 1-delta (EF-1-delta) (Elongation factor 1B-beta) (eEF-1B beta) - Beta vulgaris (Sugar beet) & (gnl|cdd|36881 : 232.0) no description available & (gnl|cdd|84994 : 106.0) no description available & (reliability: 540.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold27414_2482-11209' '(at5g10630 : 728.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 501.0) no description available & (gnl|cdd|34853 : 408.0) no description available & (p29521|ef1a1_dauca : 273.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1456.0) & (original description: Putative efg4, Description = HBS1-like protein, PFAM = PF03143;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold28728_555-2510' '(at5g60390 : 267.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24534|ef1a_vicfa : 267.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (gnl|cdd|57966 : 233.0) no description available & (gnl|cdd|35275 : 214.0) no description available & (reliability: 534.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold32299_13054-22821' '(at4g11120 : 446.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (gnl|cdd|82964 : 244.0) no description available & (gnl|cdd|36289 : 208.0) no description available & (reliability: 892.0) & (original description: Putative EFTS, Description = Elongation factor Ts, mitochondrial, PFAM = PF00889)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold39848_2321-9890' '(at5g10630 : 673.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 528.0) no description available & (gnl|cdd|34853 : 426.0) no description available & (p25698|ef1a_soybn : 279.0) Elongation factor 1-alpha (EF-1-alpha) - Glycine max (Soybean) & (reliability: 1346.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold43312_2298-5470' '(gnl|cdd|37450 : 191.0) no description available & (at3g49470 : 171.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold43922_5997-17650' '(at2g31060 : 661.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 494.0) no description available & (gnl|cdd|35683 : 335.0) no description available & (reliability: 1322.0) & (original description: Putative bipA, Description = GTP-binding protein TypA, PFAM = PF00679)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold44308_8909-12342' '(p68158|eftu_tobac : 797.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79288 : 761.0) no description available & (at4g20360 : 687.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 646.0) no description available & (reliability: 1374.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF00009;PF03144;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold50908_8375-13508' '(at2g31060 : 181.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 130.0) no description available & (reliability: 362.0) & (original description: Putative typA, Description = GTP binding Elongation factor Tu family protein, PFAM = )' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold661_172019-186260' '(at4g26310 : 226.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1). & (gnl|cdd|80699 : 189.0) no description available & (reliability: 452.0) & (original description: Putative efp, Description = Elongation factor P, PFAM = PF09285;PF01132;PF08207)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold884_22727-28879' '(p34811|efgc_soybn : 1233.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1208.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1143.0) no description available & (gnl|cdd|35686 : 919.0) no description available & (reliability: 2416.0) & (original description: Putative fusA1, Description = Elongation factor G-1, chloroplastic, PFAM = PF00679;PF14492;PF00009;PF03144;PF03764)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold1864_208539-213604' '(at3g22980 : 1447.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 975.0) no description available & (o23755|ef2_betvu : 437.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 318.0) no description available & (reliability: 2894.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF14492;PF03144;PF00009;PF00679)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold2542_33907-37345' '(o64937|ef1a_orysa : 295.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (at5g60390 : 293.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57966 : 272.0) no description available & (gnl|cdd|35275 : 234.0) no description available & (reliability: 586.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3404_294276-311441' '(at2g45030 : 1100.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 1097.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 921.0) no description available & (gnl|cdd|84252 : 766.0) no description available & (reliability: 2200.0) & (original description: Putative MEFG1, Description = Elongation factor G-1, mitochondrial, PFAM = PF00009;PF14492;PF03764;PF00679;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3984_95143-99449' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 126.0) no description available & (reliability: 1050.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3998_83039-85513' '(at5g60390 : 242.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24534|ef1a_vicfa : 241.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (gnl|cdd|57966 : 219.0) no description available & (gnl|cdd|35275 : 196.0) no description available & (reliability: 484.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold4857_131911-160727' '(at2g31060 : 986.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 741.0) no description available & (gnl|cdd|35683 : 580.0) no description available & (reliability: 1972.0) & (original description: Putative bipA, Description = GTP-binding protein, PFAM = PF00009;PF00679)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold5235_92906-101633' '(at5g10630 : 594.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 442.0) no description available & (gnl|cdd|34853 : 356.0) no description available & (p25698|ef1a_soybn : 235.0) Elongation factor 1-alpha (EF-1-alpha) - Glycine max (Soybean) & (reliability: 1188.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold5249_138805-142397' '(at1g56070 : 1003.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 995.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 824.0) no description available & (gnl|cdd|82272 : 423.0) no description available & (reliability: 2006.0) & (original description: Putative EF2, Description = Elongation factor 2, PFAM = PF03764;PF14492;PF00679;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00021317ctg000_5639-16638' '(gnl|cdd|80474 : 726.0) no description available & (at4g02930 : 725.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|35681 : 685.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1450.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF03143;PF00009;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00023911ctg008_1495-9493' '(at2g38560 : 321.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 181.0) no description available & (gnl|cdd|87289 : 119.0) no description available & (reliability: 642.0) & (original description: Putative BnaA03g17870D, Description = BnaA03g17870D protein, PFAM = PF08711;PF01096;PF07500)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00024768ctg003_3310-12625' '(at5g60390 : 279.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 279.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|57966 : 270.0) no description available & (gnl|cdd|35275 : 229.0) no description available & (reliability: 558.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00024768ctg014_131-3683' '(p43643|ef1a_tobac : 855.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 851.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 596.0) no description available & (gnl|cdd|35275 : 525.0) no description available & (reliability: 1702.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03143;PF03144;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00025848ctg004_1-2871' '(at4g29060 : 614.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 280.0) no description available & (gnl|cdd|36289 : 234.0) no description available & (reliability: 1228.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00026606ctg000_1675-9183' '(at1g07910 : 221.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative RNL, Description = Translation elongation factor EF-1 alpha, PFAM = )' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00027807ctg000_22951-26189' '(gnl|cdd|79288 : 751.0) no description available & (p68158|eftu_tobac : 720.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (at4g20360 : 671.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 633.0) no description available & (reliability: 1342.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF03144;PF03143;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00032989ctg007_2339-15301' '(at2g31060 : 512.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 400.0) no description available & (gnl|cdd|35683 : 366.0) no description available & (reliability: 1024.0) & (original description: Putative bipA, Description = GTP-binding protein TypA, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00037026ctg003_24673-28204' '(p43643|ef1a_tobac : 887.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 870.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 594.0) no description available & (gnl|cdd|35275 : 523.0) no description available & (reliability: 1740.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009;PF03144;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'niben044scf00052018ctg000_232-2660' '(at2g45030 : 192.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 165.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 147.0) no description available & (gnl|cdd|57969 : 135.0) no description available & (reliability: 384.0) & (original description: Putative efg1, Description = EF-Gmt, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101ctg15666_1-4155' '(at4g26310 : 134.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1). & (gnl|cdd|80699 : 115.0) no description available & (reliability: 268.0) & (original description: Putative efp, Description = Elongation factor P (EF-P) family protein, PFAM = PF01132;PF08207)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf00077_16422-21554' '(gnl|cdd|37450 : 162.0) no description available & (at3g12390 : 140.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf00192_107068-135084' '(at2g31060 : 964.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 754.0) no description available & (gnl|cdd|35683 : 602.0) no description available & (reliability: 1928.0) & (original description: Putative bipA, Description = GTP-binding protein, PFAM = PF00009;PF00679)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf00800_469722-483467' '(at5g13650 : 1101.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (gnl|cdd|31410 : 819.0) no description available & (gnl|cdd|35683 : 631.0) no description available & (o23755|ef2_betvu : 102.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2202.0) & (original description: Putative typA, Description = GTP-binding protein, PFAM = PF03144;PF00679;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf00878_296317-315353' '(at2g45030 : 1296.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 1261.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 1068.0) no description available & (gnl|cdd|84252 : 880.0) no description available & (reliability: 2592.0) & (original description: Putative MEFG1, Description = Elongation factor G-1, mitochondrial, PFAM = PF14492;PF00679;PF03764;PF00009;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf00934_78526-91555' '(at4g02930 : 733.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|80474 : 727.0) no description available & (gnl|cdd|35681 : 692.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1466.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF00009;PF03144;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf01239_396290-399789' '(gnl|cdd|37450 : 188.0) no description available & (at3g49470 : 160.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf01552_519248-523253' '(q6yw46|ef1g2_orysa : 600.0) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) & (at1g09640 : 555.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (gnl|cdd|36840 : 217.0) no description available & (gnl|cdd|48108 : 144.0) no description available & (reliability: 1110.0) & (original description: Putative GTSG, Description = Elongation factor 1-gamma 1, PFAM = PF02798;PF00043;PF00647)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf01777_378454-383163' '(at1g56070 : 1576.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1549.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 1268.0) no description available & (gnl|cdd|82272 : 639.0) no description available & (reliability: 3152.0) & (original description: Putative ef2, Description = Elongation factor EF-2, PFAM = PF03764;PF00679;PF14492;PF03144;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf01848_418857-422449' '(at1g56070 : 1004.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 994.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 823.0) no description available & (gnl|cdd|82272 : 424.0) no description available & (reliability: 2008.0) & (original description: Putative eef2, Description = Elongation factor 2, PFAM = PF03764;PF14492;PF00679;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf01998_298099-304857' '(at1g56070 : 1585.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1558.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 1281.0) no description available & (gnl|cdd|82272 : 640.0) no description available & (reliability: 3170.0) & (original description: Putative LOS1, Description = Elongation factor 2, PFAM = PF14492;PF00679;PF03764;PF03144;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf02059_84372-91012' '(at1g06220 : 1708.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (gnl|cdd|35689 : 1435.0) no description available & (o23755|ef2_betvu : 632.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|30828 : 428.0) no description available & (reliability: 3416.0) & (original description: Putative CLO, Description = 110 kDa U5 small nuclear ribonucleoprotein component CLO, PFAM = PF00679;PF16004;PF03144;PF03764;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf02652_233992-238318' '(at1g12420 : 555.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 128.0) no description available & (reliability: 1054.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf02757_60963-69032' '(at4g29060 : 620.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 288.0) no description available & (gnl|cdd|36289 : 231.0) no description available & (reliability: 1240.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889;PF00575;PF00575)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf03069_446974-452047' '(p29545|ef1b_orysa : 232.0) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Oryza sativa (Rice) & (gnl|cdd|36881 : 226.0) no description available & (at5g19510 : 225.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation, defense response to bacterium; LOCATED IN: apoplast, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 (TAIR:AT5G12110.1); Has 955 Blast hits to 953 proteins in 266 species: Archae - 0; Bacteria - 2; Metazoa - 477; Fungi - 150; Plants - 165; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|84994 : 108.0) no description available & (reliability: 450.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf03142_246006-254200' '(at4g29060 : 613.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 289.0) no description available & (gnl|cdd|36289 : 232.0) no description available & (reliability: 1226.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889;PF00575;PF00575)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf03350_3725-8699' '(q6yw46|ef1g2_orysa : 587.0) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) & (at1g09640 : 540.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (gnl|cdd|36840 : 217.0) no description available & (gnl|cdd|48108 : 146.0) no description available & (reliability: 1080.0) & (original description: Putative efa1G, Description = EF1Bgamma class glutathione S-transferase, PFAM = PF00043;PF02798;PF00647)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf03374_744298-749821' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80394 : 115.0) no description available & (reliability: 1020.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04099_354424-357878' '(gnl|cdd|79288 : 761.0) no description available & (q43364|eftub_nicsy : 733.0) Elongation factor TuB, chloroplast precursor (EF-TuB) - Nicotiana sylvestris (Wood tobacco) & (at4g20360 : 691.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 649.0) no description available & (reliability: 1382.0) & (original description: Putative TUFB, Description = Elongation factor TuB, chloroplastic, PFAM = PF00009;PF03144;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04099_991779-996892' '(gnl|cdd|37450 : 188.0) no description available & (at3g49470 : 154.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04184_183653-187272' '(at1g07910 : 202.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative RNL, Description = AT.I.24-9 protein, PFAM = )' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04639_1222484-1264848' '(at1g07910 : 1490.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 2980.0) & (original description: Putative RNL, Description = Translation elongation factor EF-1 alpha, PFAM = )' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04779_250150-256538' '(p34811|efgc_soybn : 1292.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1270.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1203.0) no description available & (gnl|cdd|35686 : 962.0) no description available & (reliability: 2540.0) & (original description: Putative fusA, Description = EF-G, PFAM = PF03144;PF00009;PF00679;PF14492;PF03764)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf04990_25835-34090' '(at2g38560 : 320.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 180.0) no description available & (gnl|cdd|87289 : 120.0) no description available & (reliability: 640.0) & (original description: Putative TFIIS, Description = Transcription elongation factor TFIIS, PFAM = PF01096;PF07500;PF08711)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf05437_309898-313508' '(p68158|eftu_tobac : 798.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79288 : 760.0) no description available & (at4g20360 : 688.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 646.0) no description available & (reliability: 1376.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF00009;PF03143;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf06754_33066-38092' '(gnl|cdd|37450 : 187.0) no description available & (at3g12390 : 152.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf07023_465925-470130' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 175.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf07445_71454-77874' '(at3g22980 : 1454.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 981.0) no description available & (o23755|ef2_betvu : 442.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 319.0) no description available & (reliability: 2908.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF00009;PF03144;PF00679)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf07591_112086-117261' '(at5g10630 : 541.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 408.0) no description available & (gnl|cdd|34853 : 342.0) no description available & (o24534|ef1a_vicfa : 220.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (reliability: 1082.0) & (original description: Putative EFG4, Description = GTP-binding elongation factor, PFAM = PF00009;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf07951_346458-352779' '(at3g08740 : 313.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor P (InterPro:IPR011768), Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722), Elongation factor P, C-terminal (InterPro:IPR015365), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor P/YeiP (InterPro:IPR020599); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT4G26310.1); Has 10499 Blast hits to 10498 proteins in 2700 species: Archae - 4; Bacteria - 7892; Metazoa - 1; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2521 (source: NCBI BLink). & (gnl|cdd|80699 : 257.0) no description available & (reliability: 626.0) & (original description: Putative efp, Description = Elongation factor P, PFAM = PF08207;PF09285;PF01132)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf08179_59359-63209' '(at2g38560 : 323.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 201.0) no description available & (gnl|cdd|87289 : 119.0) no description available & (reliability: 646.0) & (original description: Putative TFIIS, Description = Transcription elongation factor TFIIS, PFAM = PF01096;PF08711;PF07500)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf08250_420941-426057' '(p29545|ef1b_orysa : 237.0) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Oryza sativa (Rice) & (at5g12110 : 234.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: eukaryotic translation elongation factor 1 complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT5G19510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36881 : 228.0) no description available & (gnl|cdd|84994 : 111.0) no description available & (reliability: 468.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf08618_135957-139376' '(p43643|ef1a_tobac : 857.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 848.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 598.0) no description available & (gnl|cdd|35275 : 525.0) no description available & (reliability: 1696.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03143;PF00009;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf08618_136939-146940' '(at5g60390 : 286.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 286.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|57966 : 270.0) no description available & (gnl|cdd|35275 : 229.0) no description available & (reliability: 572.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf09387_325913-331953' '(p34811|efgc_soybn : 1311.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1286.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1218.0) no description available & (gnl|cdd|35686 : 978.0) no description available & (reliability: 2572.0) & (original description: Putative fusA1, Description = Elongation factor G-1, chloroplastic, PFAM = PF03764;PF00679;PF03144;PF00009;PF14492)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf11037_278323-290503' '(at4g02930 : 721.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|80474 : 720.0) no description available & (gnl|cdd|35681 : 683.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1442.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF00009;PF03143;PF03144)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf11491_283198-290941' '(at5g10630 : 676.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 497.0) no description available & (gnl|cdd|34853 : 411.0) no description available & (p29521|ef1a1_dauca : 273.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1352.0) & (original description: Putative efg4, Description = HBS1-like protein, PFAM = PF03143;PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf11767_75704-90177' '(at4g11120 : 452.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (gnl|cdd|82964 : 247.0) no description available & (gnl|cdd|36289 : 212.0) no description available & (reliability: 904.0) & (original description: Putative EFTS, Description = Elongation factor Ts, mitochondrial, PFAM = PF00889)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf12941_148382-150863' '(o24534|ef1a_vicfa : 268.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (at5g60390 : 267.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57966 : 233.0) no description available & (gnl|cdd|35275 : 214.0) no description available & (reliability: 534.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf14697_261214-265468' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 174.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf19454_2158-5661' '(at1g30230 : 259.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36881 : 236.0) no description available & (o81918|ef1d_betvu : 230.0) Elongation factor 1-delta (EF-1-delta) (Elongation factor 1B-beta) (eEF-1B beta) - Beta vulgaris (Sugar beet) & (gnl|cdd|84994 : 111.0) no description available & (reliability: 518.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf34389_57929-61348' '(p43643|ef1a_tobac : 887.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 870.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 597.0) no description available & (gnl|cdd|35275 : 522.0) no description available & (reliability: 1740.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03144;PF00009;PF03143)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf36076_1-654' '(at5g60390 : 310.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 310.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|84073 : 223.0) no description available & (gnl|cdd|35679 : 134.0) no description available & (reliability: 620.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T
'29.2.4' 'protein.synthesis.elongation' 'niben101scf36506_2026-9616' '(at5g10630 : 708.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 526.0) no description available & (gnl|cdd|34853 : 424.0) no description available & (o64937|ef1a_orysa : 276.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (reliability: 1416.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00641;PF00641;PF00009)' T
'29.2.4.1' 'protein.synthesis.elongation.deoxyhypusine synthase' '' ''
'29.2.5' 'protein.synthesis.release' 'nbv0.3scaffold32453_13283-23578' '(at5g36170 : 553.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 433.0) no description available & (gnl|cdd|37937 : 339.0) no description available & (reliability: 1106.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF03462;PF00472)' T
'29.2.5' 'protein.synthesis.release' 'nbv0.3scaffold46773_2676-10055' '(at3g57190 : 322.0) peptide chain release factor, putative; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescent 109 (TAIR:AT5G36170.2); Has 13500 Blast hits to 13496 proteins in 2706 species: Archae - 0; Bacteria - 9313; Metazoa - 113; Fungi - 108; Plants - 181; Viruses - 0; Other Eukaryotes - 3785 (source: NCBI BLink). & (gnl|cdd|37937 : 224.0) no description available & (gnl|cdd|80710 : 213.0) no description available & (reliability: 644.0) & (original description: Putative PRFB3, Description = Peptide chain release factor PrfB3, chloroplastic, PFAM = PF03462;PF00472)' T
'29.2.5' 'protein.synthesis.release' 'niben044scf00022460ctg004_7798-16482' '(at5g36170 : 390.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 320.0) no description available & (gnl|cdd|37937 : 254.0) no description available & (reliability: 780.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF00472;PF03462)' T
'29.2.5' 'protein.synthesis.release' 'niben044scf00058741ctg004_2479-8042' '(at1g62850 : 108.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = F23N19.20, PFAM = )' T
'29.2.5' 'protein.synthesis.release' 'niben101scf00439_1081575-1087779' '(at1g62850 : 249.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|38639 : 154.0) no description available & (gnl|cdd|82887 : 100.0) no description available & (reliability: 498.0) & (original description: Putative v1g83901, Description = Predicted protein, PFAM = PF00472)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf00912_528259-531569' '(at3g26618 : 768.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 696.0) no description available & (gnl|cdd|31692 : 430.0) no description available & (reliability: 1536.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03465;PF03464;PF03463)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf01834_426787-430097' '(at3g26618 : 773.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 693.0) no description available & (gnl|cdd|31692 : 424.0) no description available & (reliability: 1546.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03463;PF03464;PF03465)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf02569_203393-209381' '(at1g62850 : 241.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|38639 : 153.0) no description available & (gnl|cdd|82887 : 99.8) no description available & (reliability: 482.0) & (original description: Putative v1g83901, Description = Predicted protein, PFAM = PF00472)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf03362_297793-301088' '(at2g47020 : 504.0) Peptide chain release factor 1; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT3G62910.1); Has 16260 Blast hits to 16258 proteins in 2815 species: Archae - 0; Bacteria - 10372; Metazoa - 189; Fungi - 181; Plants - 204; Viruses - 13; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|80711 : 456.0) no description available & (gnl|cdd|37937 : 331.0) no description available & (reliability: 1008.0) & (original description: Putative prfA, Description = Peptide chain release factor 1, PFAM = PF00472;PF03462)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf03374_656000-667376' '(at1g62850 : 110.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = F23N19.20, PFAM = )' T
'29.2.5' 'protein.synthesis.release' 'niben101scf04487_698833-719039' '(at5g36170 : 435.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 351.0) no description available & (gnl|cdd|37937 : 278.0) no description available & (reliability: 870.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF03462;PF00472)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf05109_336567-339877' '(at3g26618 : 758.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 700.0) no description available & (gnl|cdd|31692 : 418.0) no description available & (reliability: 1516.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03464;PF03465;PF03463)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf08264_75529-89846' '(at3g62910 : 567.0) Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development.; ALBINO AND PALE GREEN (APG3); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, chloroplast organization; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide chain release factor 1 (InterPro:IPR004373), Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT2G47020.1); Has 17224 Blast hits to 17222 proteins in 2820 species: Archae - 0; Bacteria - 10525; Metazoa - 262; Fungi - 197; Plants - 224; Viruses - 13; Other Eukaryotes - 6003 (source: NCBI BLink). & (gnl|cdd|80711 : 496.0) no description available & (gnl|cdd|37937 : 355.0) no description available & (reliability: 1134.0) & (original description: Putative APG3, Description = Peptide chain release factor APG3, chloroplastic, PFAM = PF00472;PF03462)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf08621_311380-317572' '(at1g33330 : 222.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 14711 Blast hits to 14711 proteins in 2768 species: Archae - 0; Bacteria - 10081; Metazoa - 256; Fungi - 228; Plants - 204; Viruses - 13; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|37937 : 104.0) no description available & (gnl|cdd|80711 : 80.9) no description available & (reliability: 444.0) & (original description: Putative prfA, Description = Peptide chain release factor 2, PFAM = PF00472)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf10834_71219-85897' '(at5g36170 : 563.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 442.0) no description available & (gnl|cdd|37937 : 344.0) no description available & (reliability: 1126.0) & (original description: Putative rf2, Description = Putative translation releasing factor 2, PFAM = PF00472;PF03462)' T
'29.2.5' 'protein.synthesis.release' 'niben101scf11480_465840-473266' '(at1g56350 : 632.0) Peptide chain release factor 2; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescent 109 (TAIR:AT5G36170.2); Has 16865 Blast hits to 16865 proteins in 2794 species: Archae - 0; Bacteria - 10325; Metazoa - 292; Fungi - 236; Plants - 212; Viruses - 15; Other Eukaryotes - 5785 (source: NCBI BLink). & (gnl|cdd|80710 : 433.0) no description available & (gnl|cdd|37937 : 320.0) no description available & (reliability: 1264.0) & (original description: Putative PRFB2, Description = Peptide chain release factor PrfB2, chloroplastic, PFAM = PF03462;PF00472)' T
'29.2.6' 'protein.synthesis.ribosomal RNA' 'niben101scf00739_454078-457118' '(at2g37990 : 140.0) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At2g37990, Description = Ribosome biogenesis regulatory protein-like protein, PFAM = )' T
'29.2.6' 'protein.synthesis.ribosomal RNA' 'niben101scf01240_422783-428831' '(at2g37990 : 291.0) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|68510 : 165.0) no description available & (gnl|cdd|36976 : 162.0) no description available & (reliability: 582.0) & (original description: Putative rrs1, Description = Ribosome biogenesis regulatory protein-like protein, PFAM = PF04939)' T
'29.2.7' 'protein.synthesis.transfer RNA' '' ''
'29.2.7.1' 'protein.synthesis.transfer RNA.nucleus' '' ''
'29.2.7.1.1' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ala' '' ''
'29.2.7.1.2' 'protein.synthesis.transfer RNA.nucleus.tRNA-Arg' '' ''
'29.2.7.1.3' 'protein.synthesis.transfer RNA.nucleus.tRNA-Asn' '' ''
'29.2.7.1.4' 'protein.synthesis.transfer RNA.nucleus.tRNA-Asp' '' ''
'29.2.7.1.5' 'protein.synthesis.transfer RNA.nucleus.tRNA-Cys' '' ''
'29.2.7.1.6' 'protein.synthesis.transfer RNA.nucleus.tRNA-Glu' '' ''
'29.2.7.1.7' 'protein.synthesis.transfer RNA.nucleus.tRNA-Gln' '' ''
'29.2.7.1.8' 'protein.synthesis.transfer RNA.nucleus.tRNA-Gly' '' ''
'29.2.7.1.9' 'protein.synthesis.transfer RNA.nucleus.tRNA-His' '' ''
'29.2.7.1.10' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ile' '' ''
'29.2.7.1.11' 'protein.synthesis.transfer RNA.nucleus.tRNA-Leu' '' ''
'29.2.7.1.12' 'protein.synthesis.transfer RNA.nucleus.tRNA-Lys' '' ''
'29.2.7.1.13' 'protein.synthesis.transfer RNA.nucleus.tRNA-Met' '' ''
'29.2.7.1.14' 'protein.synthesis.transfer RNA.nucleus.tRNA-Phe' '' ''
'29.2.7.1.15' 'protein.synthesis.transfer RNA.nucleus.tRNA-Pro' '' ''
'29.2.7.1.16' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ser' '' ''
'29.2.7.1.17' 'protein.synthesis.transfer RNA.nucleus.tRNA-Thr' '' ''
'29.2.7.1.18' 'protein.synthesis.transfer RNA.nucleus.tRNA-Trp' '' ''
'29.2.7.1.19' 'protein.synthesis.transfer RNA.nucleus.tRNA-Tyr' '' ''
'29.2.7.1.20' 'protein.synthesis.transfer RNA.nucleus.tRNA-Val' '' ''
'29.2.7.2' 'protein.synthesis.transfer RNA.plastid' '' ''
'29.2.7.2.1' 'protein.synthesis.transfer RNA.plastid.tRNA-Ala' '' ''
'29.2.7.2.2' 'protein.synthesis.transfer RNA.plastid.tRNA-Arg' '' ''
'29.2.7.2.3' 'protein.synthesis.transfer RNA.plastid.tRNA-Asn' '' ''
'29.2.7.2.4' 'protein.synthesis.transfer RNA.plastid.tRNA-Asp' '' ''
'29.2.7.2.5' 'protein.synthesis.transfer RNA.plastid.tRNA-Cys' '' ''
'29.2.7.2.6' 'protein.synthesis.transfer RNA.plastid.tRNA-Glu' '' ''
'29.2.7.2.7' 'protein.synthesis.transfer RNA.plastid.tRNA-Gln' '' ''
'29.2.7.2.8' 'protein.synthesis.transfer RNA.plastid.tRNA-Gly' '' ''
'29.2.7.2.9' 'protein.synthesis.transfer RNA.plastid.tRNA-His' '' ''
'29.2.7.2.10' 'protein.synthesis.transfer RNA.plastid.tRNA-Ile' '' ''
'29.2.7.2.11' 'protein.synthesis.transfer RNA.plastid.tRNA-Leu' '' ''
'29.2.7.2.12' 'protein.synthesis.transfer RNA.plastid.tRNA-Lys' '' ''
'29.2.7.2.13' 'protein.synthesis.transfer RNA.plastid.tRNA-Met' '' ''
'29.2.7.2.14' 'protein.synthesis.transfer RNA.plastid.tRNA-Phe' '' ''
'29.2.7.2.15' 'protein.synthesis.transfer RNA.plastid.tRNA-Pro' '' ''
'29.2.7.2.16' 'protein.synthesis.transfer RNA.plastid.tRNA-Ser' '' ''
'29.2.7.2.17' 'protein.synthesis.transfer RNA.plastid.tRNA-Thr' '' ''
'29.2.7.2.18' 'protein.synthesis.transfer RNA.plastid.tRNA-Trp' '' ''
'29.2.7.2.19' 'protein.synthesis.transfer RNA.plastid.tRNA-Tyr' '' ''
'29.2.7.2.20' 'protein.synthesis.transfer RNA.plastid.tRNA-Val' '' ''
'29.2.7.3' 'protein.synthesis.transfer RNA.mitochondrion' '' ''
'29.2.7.3.3' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Asn' '' ''
'29.2.7.3.4' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Asp' '' ''
'29.2.7.3.5' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Cys' '' ''
'29.2.7.3.6' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Glu' '' ''
'29.2.7.3.7' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Gln' '' ''
'29.2.7.3.8' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Gly' '' ''
'29.2.7.3.10' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Ile' '' ''
'29.2.7.3.12' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Lys' '' ''
'29.2.7.3.13' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Met' '' ''
'29.2.7.3.15' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Pro' '' ''
'29.2.7.3.16' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Ser' '' ''
'29.2.7.3.18' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Trp' '' ''
'29.2.7.3.19' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Tyr' '' ''
'29.2.99' 'protein.synthesis.misc' 'nbv0.3scaffold2999_72827-76102' '(at2g39260 : 208.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 142.0) no description available & (gnl|cdd|67658 : 96.8) no description available & (reliability: 416.0) & (original description: Putative Sb06g022920, Description = Putative uncharacterized protein Sb06g022920, PFAM = PF04050)' T
'29.2.99' 'protein.synthesis.misc' 'nbv0.3scaffold57290_539-11115' '(at1g76810 : 1013.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 527.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1880.0) & (original description: Putative IF2P, Description = Eukaryotic translation initiation factor, PFAM = PF11987;PF00009;PF03144)' T
'29.2.99' 'protein.synthesis.misc' 'nbv0.5scaffold324_12006-30417' '(at5g17930 : 659.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink). & (gnl|cdd|37352 : 419.0) no description available & (reliability: 1318.0) & (original description: Putative At5g17930, Description = Putative nucleolar MIF4G domain-containing protein 1-like, PFAM = PF02854;PF02847)' T
'29.2.99' 'protein.synthesis.misc' 'niben044scf00014278ctg006_185-11307' '(at4g27650 : 595.0) Encodes Arabidopsis homolog of Drosophila pelota protein.; PELOTA (PEL1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: meiosis, translational termination, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT3G58390.1); Has 776 Blast hits to 774 proteins in 323 species: Archae - 255; Bacteria - 0; Metazoa - 140; Fungi - 159; Plants - 51; Viruses - 1; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|38080 : 527.0) no description available & (gnl|cdd|31726 : 260.0) no description available & (reliability: 1190.0) & (original description: Putative PEL1, Description = Protein PELOTA 1, PFAM = PF03463;PF03464;PF03465)' T
'29.2.99' 'protein.synthesis.misc' 'niben044scf00038445ctg002_1-9070' '(at2g39260 : 689.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 540.0) no description available & (gnl|cdd|86149 : 122.0) no description available & (reliability: 1378.0) & (original description: Putative upf2, Description = Regulator of nonsense transcripts 2, PFAM = PF02854;PF02854)' T
'29.2.99' 'protein.synthesis.misc' 'niben101scf00181_69467-80727' '(at1g76810 : 1009.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 93.6) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1866.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF00009;PF11987)' T
'29.2.99' 'protein.synthesis.misc' 'niben101scf00863_265696-276665' '(gnl|cdd|36359 : 1006.0) no description available & (at1g76810 : 1002.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1876.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF11987;PF00009)' T
'29.2.99' 'protein.synthesis.misc' 'niben101scf01035_679974-703955' '(at2g39260 : 1425.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 921.0) no description available & (gnl|cdd|86149 : 136.0) no description available & (reliability: 2850.0) & (original description: Putative UPF2, Description = Regulator of nonsense transcripts UPF2, PFAM = PF04050;PF02854;PF02854;PF02854)' T
'29.2.99' 'protein.synthesis.misc' 'niben101scf03377_417589-429633' '(at4g27650 : 593.0) Encodes Arabidopsis homolog of Drosophila pelota protein.; PELOTA (PEL1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: meiosis, translational termination, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT3G58390.1); Has 776 Blast hits to 774 proteins in 323 species: Archae - 255; Bacteria - 0; Metazoa - 140; Fungi - 159; Plants - 51; Viruses - 1; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|38080 : 529.0) no description available & (gnl|cdd|31726 : 257.0) no description available & (reliability: 1186.0) & (original description: Putative PEL1, Description = Protein PELOTA 1, PFAM = PF03465;PF03464;PF03463)' T
'29.2.99' 'protein.synthesis.misc' 'niben101scf05841_203095-227775' '(at5g17930 : 657.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink). & (gnl|cdd|37352 : 420.0) no description available & (reliability: 1314.0) & (original description: Putative At5g17930, Description = Putative nucleolar MIF4G domain-containing protein 1-like, PFAM = PF02847;PF02854)' T
'29.3' 'protein.targeting' 'nbv0.3scaffold45694_1-14860' '(at5g27395 : 332.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 119.0) no description available & (gnl|cdd|39799 : 89.0) no description available & (reliability: 664.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T
'29.3' 'protein.targeting' 'niben044scf00011498ctg001_17798-26266' '(q7xab8|thf1_soltu : 385.0) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (at2g20890 : 333.0) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative THF1, Description = Protein THYLAKOID FORMATION1, chloroplastic, PFAM = PF11264)' T
'29.3' 'protein.targeting' 'niben101scf00963_206720-222258' '(at5g27395 : 291.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 94.2) no description available & (reliability: 582.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T
'29.3' 'protein.targeting' 'niben101scf04015_172588-182850' '(at5g27395 : 337.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 119.0) no description available & (gnl|cdd|39799 : 89.4) no description available & (reliability: 674.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T
'29.3' 'protein.targeting' 'niben101scf06654_261768-270992' '(q7xab8|thf1_soltu : 406.0) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (at2g20890 : 327.0) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative THF1, Description = Protein THYLAKOID FORMATION1, chloroplastic, PFAM = PF11264)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold1764_77748-84624' '(at1g71480 : 236.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: chloroplast thylakoid membrane, intracellular, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G41470.1); Has 98 Blast hits to 98 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC06g32580D, Description = BnaC06g32580D protein, PFAM = PF12680)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold16336_18413-30296' '(at3g17340 : 899.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (gnl|cdd|37202 : 134.0) no description available & (gnl|cdd|35215 : 84.6) no description available & (reliability: 1798.0) & (original description: Putative BnaC05g36080D, Description = BnaC05g36080D protein, PFAM = PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold16862_7068-19640' '(at5g03070 : 678.0) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (q9fyp9|ima2_orysa : 588.0) Importin alpha-2 subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 318.0) no description available & (gnl|cdd|34668 : 218.0) no description available & (reliability: 1356.0) & (original description: Putative IMPA9, Description = Importin subunit alpha-9, PFAM = PF00514;PF00514)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold18583_3093-12394' '(at1g12930 : 146.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold21718_14277-20134' '(at1g27970 : 206.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 163.0) no description available & (q9xj54|ntf2_orysa : 162.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 128.0) no description available & (reliability: 412.0) & (original description: Putative NTF2, Description = Nuclear transport factor 2, PFAM = PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold30914_1-9215' '(at1g26170 : 776.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37485 : 456.0) no description available & (reliability: 1552.0) & (original description: Putative At1g26170, Description = Importin beta-2 subunit family protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold36231_772-7377' '(gnl|cdd|35339 : 300.0) no description available & (at3g25150 : 278.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 130.0) no description available & (reliability: 556.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold37289_17905-38787' '(at5g17020 : 1746.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1035.0) no description available & (gnl|cdd|34704 : 922.0) no description available & (reliability: 3492.0) & (original description: Putative Xpo1, Description = Exportin-1, PFAM = PF08389;PF03810;PF08767)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold40751_5789-23231' '(at1g12930 : 360.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold40942_1-9978' '(at1g12930 : 171.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold49876_598-11904' '(at4g27640 : 1479.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 780.0) no description available & (gnl|cdd|34812 : 108.0) no description available & (reliability: 2958.0) & (original description: Putative Sb01g040400, Description = Putative uncharacterized protein Sb01g040400, PFAM = PF03810;PF02985)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold51289_8190-13436' '(at3g06720 : 732.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q9slx0|ima1b_orysa : 732.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 633.0) no description available & (gnl|cdd|34668 : 536.0) no description available & (reliability: 1464.0) & (original description: Putative kapA, Description = Importin subunit alpha, PFAM = PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF16186)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold62774_2489-11142' '(at1g09270 : 822.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 750.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 681.0) no description available & (gnl|cdd|34668 : 575.0) no description available & (reliability: 1644.0) & (original description: Putative IMPA4, Description = Importin subunit alpha-4, PFAM = PF01749;PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold67098_6481-10008' '(gnl|cdd|35339 : 200.0) no description available & (at3g25150 : 149.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 124.0) no description available & (reliability: 298.0) & (original description: Putative LOC100382927, Description = Nuclear transport factor 2, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold107324_830-5566' '(at3g08943 : 586.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1770 Blast hits to 1697 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 669; Fungi - 578; Plants - 273; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|36455 : 415.0) no description available & (gnl|cdd|34812 : 231.0) no description available & (reliability: 1172.0) & (original description: Putative BnaC05g33770D, Description = BnaC05g33770D protein, PFAM = PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold90_567906-576045' '(at1g10390 : 246.0) Nucleoporin autopeptidase; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G59660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86541 : 173.0) no description available & (reliability: 492.0) & (original description: Putative NbNup98b, Description = Nuclear pore complex protein Nup98b, PFAM = PF04096)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold119_736157-750617' '(at2g31660 : 1499.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 1130.0) no description available & (gnl|cdd|35215 : 386.0) no description available & (reliability: 2998.0) & (original description: Putative SAD2, Description = Importin beta-like SAD2, PFAM = PF03810;PF08506)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold277_364249-490540' '(at3g17340 : 240.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (reliability: 480.0) & (original description: Putative At3g17340, Description = ARM repeat superfamily protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold415_704245-770389' '(at1g12930 : 858.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1716.0) & (original description: Putative Sb05g020810, Description = Putative uncharacterized protein Sb05g020810, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold415_726519-747738' '(at1g12930 : 325.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold637_397824-416108' '(at5g20200 : 100.0) nucleoporin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10650.1); Has 1474 Blast hits to 595 proteins in 170 species: Archae - 0; Bacteria - 165; Metazoa - 255; Fungi - 183; Plants - 74; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold695_201042-219940' '(at5g05680 : 479.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 265.0) no description available & (reliability: 958.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold766_23829-30603' '(gnl|cdd|35339 : 295.0) no description available & (at3g25150 : 229.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 131.0) no description available & (reliability: 458.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF00076;PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold794_538067-544598' '(gnl|cdd|35339 : 291.0) no description available & (at3g25150 : 282.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 130.0) no description available & (reliability: 564.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF00076;PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold873_441882-446138' '(gnl|cdd|35339 : 208.0) no description available & (at3g25150 : 152.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 124.0) no description available & (reliability: 304.0) & (original description: Putative LOC100382927, Description = Os02g0497700 protein, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1549_274926-294309' '(at5g17020 : 1855.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1072.0) no description available & (gnl|cdd|34704 : 957.0) no description available & (reliability: 3710.0) & (original description: Putative XPO1, Description = Protein EXPORTIN 1A, PFAM = PF08767;PF03810;PF08389)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1579_216240-220568' '(gnl|cdd|71335 : 109.0) no description available & (at3g07250 : 106.0) nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G48650.1); Has 5020 Blast hits to 2878 proteins in 309 species: Archae - 0; Bacteria - 77; Metazoa - 2136; Fungi - 614; Plants - 1253; Viruses - 84; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative AFP, Description = Ninja-family protein AFP1, PFAM = PF16135;PF07897)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1611_284646-292131' '(at1g80680 : 1157.0) Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.; SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3); FUNCTIONS IN: porin activity; INVOLVED IN: mRNA export from nucleus, defense response signaling pathway, resistance gene-dependent, response to auxin stimulus, negative regulation of flower development, developmental process; LOCATED IN: nuclear membrane, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230), Nuclear protein 96 (InterPro:IPR021967); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G10390.2); Has 653 Blast hits to 526 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 224; Plants - 93; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36063 : 166.0) no description available & (gnl|cdd|86541 : 162.0) no description available & (reliability: 2314.0) & (original description: Putative NUP96, Description = Nuclear pore complex protein NUP96, PFAM = PF12110;PF04096)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold2737_126348-132007' '(at1g68910 : 217.0) Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.; WPP domain-interacting protein 2 (WIT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 1 (TAIR:AT5G11390.1). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400026559, Description = WPP domain-interacting tail-anchored protein 1, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold3537_225661-234339' '(at4g37130 : 356.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4006_177490-182209' '(at5g53480 : 1432.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36455 : 1031.0) no description available & (gnl|cdd|34812 : 535.0) no description available & (reliability: 2864.0) & (original description: Putative KPNB1, Description = Importin subunit beta-1, PFAM = PF13513;PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4059_103799-127919' '(at5g43960 : 280.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35339 : 236.0) no description available & (q08935|roc1_nicsy : 137.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29630 : 109.0) no description available & (reliability: 560.0) & (original description: Putative glysoja_002492, Description = Putative G3BP-like protein, PFAM = PF00076;PF00076;PF00076;PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4106_73284-93581' '(at2g16950 : 811.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 750.0) no description available & (reliability: 1622.0) & (original description: Putative tnpo, Description = Transportin-1, PFAM = PF02985;PF13513)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold5780_123606-130775' '(at1g27970 : 181.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 153.0) no description available & (q9xj54|ntf2_orysa : 135.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 116.0) no description available & (reliability: 362.0) & (original description: Putative ntf2, Description = Nuclear transport factor 2, PFAM = PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold7314_7062-24859' '(at1g12930 : 145.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = PF08389)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00002147ctg039_9069-12926' '(at2g31660 : 223.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 179.0) no description available & (gnl|cdd|35216 : 80.4) no description available & (reliability: 446.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00002147ctg041_1-6853' '(at2g31660 : 914.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 687.0) no description available & (gnl|cdd|35215 : 251.0) no description available & (reliability: 1828.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF08506)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00003811ctg000_1-2908' '(at1g27970 : 160.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 136.0) no description available & (q9xj54|ntf2_orysa : 130.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 108.0) no description available & (reliability: 320.0) & (original description: Putative NTF2, Description = Nuclear transport factor 2, PFAM = PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00004667ctg009_1068-6494' '(at5g17020 : 441.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 259.0) no description available & (gnl|cdd|34704 : 222.0) no description available & (reliability: 882.0) & (original description: Putative Xpo1, Description = Exportin-1, PFAM = PF08389;PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00005661ctg000_739-5446' '(at3g08947 : 1219.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 861.0) no description available & (gnl|cdd|34812 : 537.0) no description available & (reliability: 2438.0) & (original description: Putative IMB1, Description = Importin subunit beta-1, PFAM = PF03810;PF13513)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00006157ctg004_2636-20775' '(at1g12930 : 302.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00012555ctg002_14138-18778' '(at5g20200 : 82.4) nucleoporin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10650.1); Has 1474 Blast hits to 595 proteins in 170 species: Archae - 0; Bacteria - 165; Metazoa - 255; Fungi - 183; Plants - 74; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00012886ctg004_1210-9098' '(gnl|cdd|35339 : 310.0) no description available & (at3g25150 : 264.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 136.0) no description available & (reliability: 528.0) & (original description: Putative At3g25150, Description = Nuclear transport factor 2 and RNA recognition motif domain-containing protein, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00020436ctg003_1648-4631' '(at3g17340 : 238.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (reliability: 476.0) & (original description: Putative At3g17340, Description = ARM repeat superfamily protein, PFAM = )' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00021963ctg008_1-3941' '(at3g08947 : 1238.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 881.0) no description available & (gnl|cdd|34812 : 551.0) no description available & (reliability: 2476.0) & (original description: Putative At3g08947, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF03810;PF13513)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00023242ctg002_1-8530' '(at5g05680 : 323.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 180.0) no description available & (reliability: 646.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00023242ctg005_230-10793' '(at5g05680 : 500.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 283.0) no description available & (reliability: 1000.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00026709ctg006_12500-19492' '(at5g17020 : 617.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 330.0) no description available & (gnl|cdd|34704 : 303.0) no description available & (reliability: 1234.0) & (original description: Putative caf2, Description = Exportin-1, PFAM = PF08389;PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00028776ctg007_3005-11624' '(at4g37130 : 357.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00029450ctg004_719-12349' '(at4g27640 : 1497.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 786.0) no description available & (gnl|cdd|34812 : 108.0) no description available & (reliability: 2994.0) & (original description: Putative Sb01g040400, Description = Putative uncharacterized protein Sb01g040400, PFAM = PF02985;PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00030328ctg006_1-3343' '(at2g16950 : 311.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 306.0) no description available & (reliability: 622.0) & (original description: Putative tnpo, Description = Transportin-1, PFAM = PF13513)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00030328ctg008_979-9735' '(at2g16950 : 566.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 484.0) no description available & (reliability: 1132.0) & (original description: Putative TNPO1, Description = Transportin-1, PFAM = PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben044scf00041069ctg002_31554-41842' '(at5g40480 : 2006.0) embryo defective 3012 (EMB3012); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964), Bacterial Ig-like, group 2 (InterPro:IPR003343); Has 264 Blast hits to 238 proteins in 89 species: Archae - 0; Bacteria - 31; Metazoa - 150; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37044 : 272.0) no description available & (reliability: 4012.0) & (original description: Putative GB210, Description = Nuclear pore complex protein GP210, PFAM = PF02368;PF02368)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101ctg11114_1-1208' '(at1g11570 : 165.0) NTF2-like (NTL); FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: nucleus, intracellular; EXPRESSED IN: leaf whorl, sperm cell, flower, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2B (TAIR:AT1G27970.1); Has 1082 Blast hits to 1082 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 586; Fungi - 199; Plants - 205; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|37315 : 150.0) no description available & (q9xj54|ntf2_orysa : 135.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 117.0) no description available & (reliability: 330.0) & (original description: Putative NTL, Description = Nuclear transport factor 2-like protein, PFAM = PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00044_87093-97110' '(at4g37130 : 323.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00109_1082666-1085123' '(at1g27310 : 171.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2A (NTF2A); CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2B (TAIR:AT1G27970.1); Has 977 Blast hits to 977 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 416; Fungi - 243; Plants - 223; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 139.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|37315 : 134.0) no description available & (gnl|cdd|29630 : 109.0) no description available & (reliability: 342.0) & (original description: Putative ntf2, Description = Nuclear transport factor 2, PFAM = PF02136)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00113_466214-474194' '(gnl|cdd|35339 : 309.0) no description available & (at3g25150 : 267.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 134.0) no description available & (reliability: 534.0) & (original description: Putative At3g25150, Description = Nuclear transport factor 2 and RNA recognition motif domain-containing protein, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00270_1000584-1016512' '(at2g31660 : 1474.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 1105.0) no description available & (gnl|cdd|35215 : 378.0) no description available & (reliability: 2948.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF03810;PF03810;PF08506)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00465_706296-741029' '(at1g26170 : 1317.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37485 : 794.0) no description available & (gnl|cdd|35216 : 93.9) no description available & (reliability: 2634.0) & (original description: Putative At1g26170, Description = Importin-beta N-terminal domain-containing protein, PFAM = PF03810)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00597_832457-841002' '(gnl|cdd|35339 : 238.0) no description available & (at5g43960 : 233.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29630 : 115.0) no description available & (reliability: 466.0) & (original description: Putative At5g43960, Description = Gb}, PFAM = PF02136;PF00076)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf00866_1983-8451' '(at2g46520 : 1230.0) cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37203 : 1004.0) no description available & (gnl|cdd|71934 : 443.0) no description available & (reliability: 2460.0) & (original description: Putative CAS, Description = Exportin-2, PFAM = PF03378;PF03810;PF08506)' T
'29.3.1' 'protein.targeting.nucleus' 'niben101scf01063_733922-757072' '(at5g17020 : 1859.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1077.0) no description available & (gnl|cdd|34704 : 959.0) no description available & (reliability: 3718.0) &